Pregenerated sensors for OLFR1231 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075093Ensembl transcript IDs: ENSMUST00000099786.2, ENSMUST00000216144.3
Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TTTTACTTTCTGACTGTGCTTATAATCTGTGCAGTTCAACCCCTCACTTACCTGTGTGGGAAGCATGGATaGGGATGTGACAGTGAAAAA | + |
|
Preference number: 2 (lower is better) Translates to: FYFLTVLIICAVQPLTYLCGKHG*GCDSEK Trigger: TTTTTCACTGTCACATCCCCATCCATGCTTCCCACA...CAGGTAAGTGAGGGGTTGAACTGCACAGATTATAAGCACAGTCAGAAAGTAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216144.3 |
||
| 3UTR-3UTR GCA 90 bp | GGTTACTACAATACTTACTCCAGTACTGATAAGGAAGACAAATACCTATCCTTTATTTATTTAAAGATCTaGAGAAAAGCCAGTGTCACC | + |
|
Preference number: 2 (lower is better) Translates to: GYYNTYSSTDKEDKYLSFIYLKI*RKASVT Trigger: GGTGACACTGGCTTTTCTGCAGATCTTTAAATAAAT...AAAGGATAGGTATTTGTCTTCCTTATCAGTACTGGAGTAAGTATTGTAGTAACC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216144.3 |
||
| 3UTR TCA 72 bp | TGTGCAGTTCAACCCCTCACTTACCTGGTAAGAAACTaGTATATCTCCCATGACACAGTCATTGACCTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: CAVQPLTYLVRN*YISHDTVIDLG Trigger: ACCAAGGTCAATGACTGTGTCATGGGAGATATATCAGTTTCTTACCAGGTAAGTGAGGGGTTGAACTGCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216144.3 |
||
| 3UTR-3UTR CAA 90 bp | TTTTACTTTCTGACTGTGCTTATAATCTGTGCAGTTCAACCCCTCACTTACCTGCCCATGACACAGTCATaGACCTTGGTTTTCTACTTG | + |
|
Preference number: 3 (lower is better) Translates to: FYFLTVLIICAVQPLTYLPMTQS*TLVFYL Trigger: CAAGTAGAAAACCAAGGTCAATGACTGTGTCATGGG...CAGGTAAGTGAGGGGTTGAACTGCACAGATTATAAGCACAGTCAGAAAGTAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000216144.3 |
||
| 3UTR TCA 72 bp | CATTTCAATCACATTCCTATGTGGCCATGTCTCCACTaGACTAATCACGTTATAAGTAATTTCCCATCTACG | + |
|
Preference number: 3 (lower is better) Translates to: HFNHIPMWPCLH*TNHVISNFPST Trigger: CGTAGATGGGAAATTACTTATAACGTGATTAGTTCAGTGGAGACATGGCCACATAGGAATGTGATTGAAATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216144.3 |
||
| 3UTR-3UTR CAA 90 bp | GGTTACTACAATACTTACTCCAGTACTGATAAGGAAGACAAATACCTATCCTTTGCAGTAAGGTTGCGTTaGTTCCTCAAAGGTTTAGTT | + |
|
Preference number: 3 (lower is better) Translates to: GYYNTYSSTDKEDKYLSFAVRLR*FLKGLV Trigger: AACTAAACCTTTGAGGAACAAACGCAACCTTACTGC...AAAGGATAGGTATTTGTCTTCCTTATCAGTACTGGAGTAAGTATTGTAGTAACC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216144.3 |
||
| CDS-3UTR TCA 90 bp | TTTTACTTTCTGACTGTGCTTATAATCTGTGCAGTTCAACCCCTCACTTACCTGGAGGAGGATAATCTCTaGTCCTCCCAGGAAGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FYFLTVLIICAVQPLTYLEEDNL*SSQEVL Trigger: GAGCACTTCCTGGGAGGATCAGAGATTATCCTCCTC...CAGGTAAGTGAGGGGTTGAACTGCACAGATTATAAGCACAGTCAGAAAGTAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216144.3 |
||
| CDS-3UTR TCA 90 bp | TTTTACTTTCTGACTGTGCTTATAATCTGTGCAGTTCAACCCCTCACTTACCTGAGCGTGGATTCTGTGTaGGACCCAGGAGAACAAATT | + |
|
Preference number: 4 (lower is better) Translates to: FYFLTVLIICAVQPLTYLSVDSV*DPGEQI Trigger: AATTTGTTCTCCTGGGTCTCACACAGAATCCACGCT...CAGGTAAGTGAGGGGTTGAACTGCACAGATTATAAGCACAGTCAGAAAGTAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216144.3 |
||
| CDS-3UTR TCA 90 bp | GGTTACTACAATACTTACTCCAGTACTGATAAGGAAGACAAATACCTATCCTTTGAAGTACATTGGAGCTaGAAGGGTGGGGCTGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GYYNTYSSTDKEDKYLSFEVHWS*KGGAEG Trigger: TCCTTCAGCCCCACCCTTTCAGCTCCAATGTACTTC...AAAGGATAGGTATTTGTCTTCCTTATCAGTACTGGAGTAAGTATTGTAGTAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216144.3 |
||
| CDS-3UTR TCA 90 bp | GGTTACTACAATACTTACTCCAGTACTGATAAGGAAGACAAATACCTATCCTTTACCACCACAGTACAGTaGGAGCCACACGTGGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GYYNTYSSTDKEDKYLSFTTTVQ*EPHVER Trigger: TCTTTCCACGTGTGGCTCTCACTGTACTGTGGTGGT...AAAGGATAGGTATTTGTCTTCCTTATCAGTACTGGAGTAAGTATTGTAGTAACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216144.3 |
||
| 3UTR CAA 72 bp | AATTTGCTAGGACACAGATCTCTAAGATGTGCATGTTaGCCCCATTTCAATCACATTCCTATGTGGCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: NLLGHRSLRCAC*PHFNHIPMWPC Trigger: ACATGGCCACATAGGAATGTGATTGAAATGGGGCAAACATGCACATCTTAGAGATCTGTGTCCTAGCAAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216144.3 |
||
| CDS-3UTR GCA 90 bp | TTTTACTTTCTGACTGTGCTTATAATCTGTGCAGTTCAACCCCTCACTTACCTGGCTTATGTGTGTCTCTaGAGGCAAGTTTCAACAATG | + |
|
Preference number: 4 (lower is better) Translates to: FYFLTVLIICAVQPLTYLAYVCL*RQVSTM Trigger: CATTGTTGAAACTTGCCTGCAGAGACACACATAAGC...CAGGTAAGTGAGGGGTTGAACTGCACAGATTATAAGCACAGTCAGAAAGTAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216144.3 |
||
| CDS-3UTR CCA 90 bp | GGTTACTACAATACTTACTCCAGTACTGATAAGGAAGACAAATACCTATCCTTTATTCAGTCACATTACTaGGAGGACTGTGGAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GYYNTYSSTDKEDKYLSFIQSHY*EDCGAP Trigger: TGGAGCTCCACAGTCCTCCCAGTAATGTGACTGAAT...AAAGGATAGGTATTTGTCTTCCTTATCAGTACTGGAGTAAGTATTGTAGTAACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216144.3 |
||
| 3UTR CAA 72 bp | GTAATGGACTTGTGGGAACAAAGGTCAGAATGTAATTaGCTAGGACACAGATCTCTAAGATGTGCATGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VMDLWEQRSECN*LGHRSLRCACL Trigger: CAAACATGCACATCTTAGAGATCTGTGTCCTAGCAAATTACATTCTGACCTTTGTTCCCACAAGTCCATTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216144.3 |
||
| 3UTR CAA 72 bp | GAAACTGATATATCTCCCATGACACAGTCATTGACCTaGGTTTTCTACTTGAAATCATTCGTCTGTCTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: ETDISPMTQSLT*VFYLKSFVCLR Trigger: TCTAAGACAGACGAATGATTTCAAGTAGAAAACCAAGGTCAATGACTGTGTCATGGGAGATATATCAGTTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216144.3 |
||
| 3UTR CAA 72 bp | ATCATTCATGACACTGTGCCTCCCATTGGTTCTATTTaGATCTTCCCTAGTAAATTGTCTCTAGACCATATT | + |
|
Preference number: 4 (lower is better) Translates to: IIHDTVPPIGSI*IFPSKLSLDHI Trigger: AATATGGTCTAGAGACAATTTACTAGGGAAGATCAAAATAGAACCAATGGGAGGCACAGTGTCATGAATGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216144.3 |
||
| CDS-3UTR CAA 90 bp | TTTTACTTTCTGACTGTGCTTATAATCTGTGCAGTTCAACCCCTCACTTACCTGATCCAGCCAAGGATATaGTCCTCCTCTGGTAGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: FYFLTVLIICAVQPLTYLIQPRI*SSSGRE Trigger: TTCTCTACCAGAGGAGGACAATATCCTTGGCTGGAT...CAGGTAAGTGAGGGGTTGAACTGCACAGATTATAAGCACAGTCAGAAAGTAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216144.3 |
||
| CDS CAA 90 bp | GAGATGAGAAGCATGGTAAAAATGAGAAAGCACATAGCCCCACTGTaGGCGGCCACTATGATGCCCAGCTTATGTGTGTCTCTGCAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: EMRSMVKMRKHIAPL*AATMMPSLCVSLQA Trigger: TGCCTGCAGAGACACACATAAGCTGGGCATCATAGTGGCCGCCAACAGTGGGGCTATGTGCTTTCTCATTTTTACCATGCTTCTCATCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099786.2 ENSMUST00000216144.3 |
||
| CDS TCA 72 bp | ACTATGAGACTTCAAGGATCGCAGGATAACTATGTATaGGATGAGAAGCATGGTAAAAATGAGAAAGCACAT | + |
|
Preference number: 6 (lower is better) Translates to: TMRLQGSQDNYV*DEKHGKNEKAH Trigger: ATGTGCTTTCTCATTTTTACCATGCTTCTCATCTCATACATAGTTATCCTGCGATCCTTGAAGTCTCATAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099786.2 ENSMUST00000216144.3 |
||