Pregenerated sensors for OLFR1230 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000075094

Ensembl transcript IDs: ENSMUST00000099787.2

Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CAA 90 bp	GAAGTGATGAGAATAAGGAAAATGGTCACACACATTACCCCACTGTaGAGAATGACTAAGAGAGCTAGGATATGGGTGTCCATGCAGGCT	+
Preference number: 6 (lower is better) Translates to: EVMRIRKMVTHITPL*RMTKRARIWVSMQA Trigger: AGCCTGCATGGACACCCATATCCTAGCTCTCTTAGTCATTCTCAACAGTGGGGTAATGTGTGTGACCATTTTCCTTATTCTCATCACTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099787.2
CDS TCA 72 bp	GAGACCTCAGATTCGGACTCACTGTTACAGTTACAATaGTCAGTAGGTTTCCCAAAAGTGTGGCCACATACA	+
Preference number: 6 (lower is better) Translates to: ETSDSDSLLQLQ*SVGFPKVWPHT Trigger: TGTATGTGGCCACACTTTTGGGAAACCTACTGATCATTGTAACTGTAACAGTGAGTCCGAATCTGAGGTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099787.2
CDS CAA 72 bp	AGAATAAGGAAAATGGTCACACACATTACCCCACTGTaGAGAATGACTAAGAGAGCTAGGATATGGGTGTCC	+
Preference number: 6 (lower is better) Translates to: RIRKMVTHITPL*RMTKRARIWVS Trigger: GGACACCCATATCCTAGCTCTCTTAGTCATTCTCAACAGTGGGGTAATGTGTGTGACCATTTTCCTTATTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099787.2
CDS TCA 72 bp	AGAAAGAGAGTCTACAATCAACTTGGGAGCAGTGACTaGAGAGTAGATGACATCCAAAAGGGACAAGGAAAT	+
Preference number: 6 (lower is better) Translates to: RKRVYNQLGSSD*RVDDIQKGQGN Trigger: ATTTCCTTGTCCCTTTTGGATGTCATCTACTCTTCAGTCACTGCTCCCAAGTTGATTGTAGACTCTCTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099787.2

---

If you would like us to post a table for your organism of interest, or have questions, please reach out to eerik at stanford dot edu or xjgao at stanford.edu