Pregenerated sensors for OLFR1230 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075094Ensembl transcript IDs: ENSMUST00000099787.2
Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS CAA 90 bp | GAAGTGATGAGAATAAGGAAAATGGTCACACACATTACCCCACTGTaGAGAATGACTAAGAGAGCTAGGATATGGGTGTCCATGCAGGCT | + |
Preference number: 6 (lower is better) Translates to: EVMRIRKMVTHITPL*RMTKRARIWVSMQA Trigger: AGCCTGCATGGACACCCATATCCTAGCTCTCTTAGTCATTCTCAACAGTGGGGTAATGTGTGTGACCATTTTCCTTATTCTCATCACTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099787.2 |
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CDS TCA 72 bp | GAGACCTCAGATTCGGACTCACTGTTACAGTTACAATaGTCAGTAGGTTTCCCAAAAGTGTGGCCACATACA | + |
Preference number: 6 (lower is better) Translates to: ETSDSDSLLQLQ*SVGFPKVWPHT Trigger: TGTATGTGGCCACACTTTTGGGAAACCTACTGATCATTGTAACTGTAACAGTGAGTCCGAATCTGAGGTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099787.2 |
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CDS CAA 72 bp | AGAATAAGGAAAATGGTCACACACATTACCCCACTGTaGAGAATGACTAAGAGAGCTAGGATATGGGTGTCC | + |
Preference number: 6 (lower is better) Translates to: RIRKMVTHITPL*RMTKRARIWVS Trigger: GGACACCCATATCCTAGCTCTCTTAGTCATTCTCAACAGTGGGGTAATGTGTGTGACCATTTTCCTTATTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099787.2 |
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CDS TCA 72 bp | AGAAAGAGAGTCTACAATCAACTTGGGAGCAGTGACTaGAGAGTAGATGACATCCAAAAGGGACAAGGAAAT | + |
Preference number: 6 (lower is better) Translates to: RKRVYNQLGSSD*RVDDIQKGQGN Trigger: ATTTCCTTGTCCCTTTTGGATGTCATCTACTCTTCAGTCACTGCTCCCAAGTTGATTGTAGACTCTCTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099787.2 |