Pregenerated sensors for OLFR1228 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000099486Ensembl transcript IDs: ENSMUST00000190757.3, ENSMUST00000215447.2, ENSMUST00000216392.2
Found 24 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTCTCTTTCCTGTGCTGTTTTTCTGGGAGATGGGTATCCTATCTCTaGTTCATTCTGTTAAATCTTTCTCTGATTCATCACTTTGTCTAT | + |
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Preference number: 1 (lower is better) Translates to: FSFLCCFSGRWVSYL*FILLNLSLIHHFVY Trigger: ATAGACAAAGTGATGAATCAGAGAAAGATTTAACAGAATGAATCAGAGATAGGATACCCATCTCCCAGAAAAACAGCACAGGAAAGAGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000215447.2 ENSMUST00000216392.2 |
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| 3UTR CAA 90 bp | GGGATTAAAGGTGTGTATCAAGGGTATGTTTACATCCCAAGCAGATaGCCCTGTATCAGAAGGTCTGCATTCTGGCTGGATCATATGAAC | + |
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Preference number: 2 (lower is better) Translates to: GIKGVYQGYVYIPSR*PCIRRSAFWLDHMN Trigger: GTTCATATGATCCAGCCAGAATGCAGACCTTCTGATACAGGGCAATCTGCTTGGGATGTAAACATACCCTTGATACACACCTTTAATCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215447.2 ENSMUST00000216392.2 |
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| 3UTR-3UTR GCA 90 bp | TATAATTCTCTTTCCTGTGCTGTTTTTCTGGGAGATGGGTATCCTATCTCTGATACATCCCAAGCAGATTaGCCTGTATCAGAAGGTCTG | + |
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Preference number: 2 (lower is better) Translates to: YNSLSCAVFLGDGYPISDTSQAD*PVSEGL Trigger: CAGACCTTCTGATACAGGGCAATCTGCTTGGGATGT...ATCAGAGATAGGATACCCATCTCCCAGAAAAACAGCACAGGAAAGAGAATTATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000215447.2 ENSMUST00000216392.2 |
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| 3UTR-3UTR TCA 90 bp | ATTATAATTCTCTTTCCTGTGCTGTTTTTCTGGGAGATGGGTATCCTATCTCTGCTGTGCTATAATGAATaGCTTCTTAATGGGTGTTGT | + |
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Preference number: 2 (lower is better) Translates to: IIILFPVLFFWEMGILSLLCYNE*LLNGCC Trigger: ACAACACCCATTAAGAAGTCATTCATTATAGCACAG...CAGAGATAGGATACCCATCTCCCAGAAAAACAGCACAGGAAAGAGAATTATAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000215447.2 ENSMUST00000216392.2 |
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| 3UTR-3UTR TCA 90 bp | TATAATTCTCTTTCCTGTGCTGTTTTTCTGGGAGATGGGTATCCTATCTCTGATCTGTGCTATAATGAATaGCTTCTTAATGGGTGTTGT | + |
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Preference number: 2 (lower is better) Translates to: YNSLSCAVFLGDGYPISDLCYNE*LLNGCC Trigger: ACAACACCCATTAAGAAGTCATTCATTATAGCACAG...ATCAGAGATAGGATACCCATCTCCCAGAAAAACAGCACAGGAAAGAGAATTATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000215447.2 ENSMUST00000216392.2 |
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| 3UTR GCA 72 bp | GTGTGTATCAAGGGTATGTTTACATCCCAAGCAGATTaGCCTGTATCAGAAGGTCTGCATTCTGGCTGGATC | + |
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Preference number: 3 (lower is better) Translates to: VCIKGMFTSQAD*PVSEGLHSGWI Trigger: GATCCAGCCAGAATGCAGACCTTCTGATACAGGGCAATCTGCTTGGGATGTAAACATACCCTTGATACACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215447.2 ENSMUST00000216392.2 |
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| CDS-3UTR GCA 90 bp | CCCAAGCAGATTGCCCTGTATCAGAAGGTCTGCATTCTGGCTGGATCATATGAAGGGAGAGCTCAGCAGTaGAGGGCTGTAGATGATAGT | + |
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Preference number: 4 (lower is better) Translates to: PKQIALYQKVCILAGSYEGRAQQ*RAVDDS Trigger: ACTATCATCTACAGCCCTGCACTGCTGAGCTCTCCC...TTCATATGATCCAGCCAGAATGCAGACCTTCTGATACAGGGCAATCTGCTTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215447.2 ENSMUST00000216392.2 |
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| CDS-3UTR GCA 90 bp | GTGTGTATCAAGGGTATGTTTACATCCCAAGCAGATTGCCCTGTATCAGAAGGTGGGAGAGCTCAGCAGTaGAGGGCTGTAGATGATAGT | + |
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Preference number: 4 (lower is better) Translates to: VCIKGMFTSQADCPVSEGGRAQQ*RAVDDS Trigger: ACTATCATCTACAGCCCTGCACTGCTGAGCTCTCCC...ACCTTCTGATACAGGGCAATCTGCTTGGGATGTAAACATACCCTTGATACACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215447.2 ENSMUST00000216392.2 |
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| CDS-3UTR CCA 90 bp | ATCCCAAGCAGATTGCCCTGTATCAGAAGGTCTGCATTCTGGCTGGATCATATGAGCACAACTGTAATGTaGGATCCACATGTGGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: IPSRLPCIRRSAFWLDHMSTTVM*DPHVER Trigger: TCTCTCCACATGTGGATCCCACATTACAGTTGTGCT...CATATGATCCAGCCAGAATGCAGACCTTCTGATACAGGGCAATCTGCTTGGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215447.2 ENSMUST00000216392.2 |
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| CDS-3UTR GCA 90 bp | GTATGTTTACATCCCAAGCAGATTGCCCTGTATCAGAAGGTCTGCATTCTGGCTATACCATCACCAAAATaGCACAGAGTCTCCTGGTCA | + |
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Preference number: 4 (lower is better) Translates to: VCLHPKQIALYQKVCILAIPSPK*HRVSWS Trigger: TGACCAGGAGACTCTGTGGCATTTTGGTGATGGTAT...AGCCAGAATGCAGACCTTCTGATACAGGGCAATCTGCTTGGGATGTAAACATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215447.2 ENSMUST00000216392.2 |
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| CDS-3UTR GCA 90 bp | ATCCCAAGCAGATTGCCCTGTATCAGAAGGTCTGCATTCTGGCTGGATCATATGCCACAGAAGGGCAGCTaGAAAGTGAAGATAATTTGT | + |
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Preference number: 4 (lower is better) Translates to: IPSRLPCIRRSAFWLDHMPQKGS*KVKIIC Trigger: ACAAATTATCTTCACTTTGCAGCTGCCCTTCTGTGG...CATATGATCCAGCCAGAATGCAGACCTTCTGATACAGGGCAATCTGCTTGGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215447.2 ENSMUST00000216392.2 |
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| CDS-3UTR TCA 90 bp | GTATGTTTACATCCCAAGCAGATTGCCCTGTATCAGAAGGTCTGCATTCTGGCTGTCATAGGCCATGGCTaGCAAAATAATCACCTCTAT | + |
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Preference number: 4 (lower is better) Translates to: VCLHPKQIALYQKVCILAVIGHG*QNNHLY Trigger: ATAGAGGTGATTATTTTGTCAGCCATGGCCTATGAC...AGCCAGAATGCAGACCTTCTGATACAGGGCAATCTGCTTGGGATGTAAACATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215447.2 ENSMUST00000216392.2 |
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| CDS-3UTR TCA 90 bp | ATTATAATTCTCTTTCCTGTGCTGTTTTTCTGGGAGATGGGTATCCTATCTCTGCGCCCTTCAGAGCTGTaGGCTCTCAGAGAAAACAAG | + |
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Preference number: 4 (lower is better) Translates to: IIILFPVLFFWEMGILSLRPSEL*ALRENK Trigger: CTTGTTTTCTCTGAGAGCTCACAGCTCTGAAGGGCG...CAGAGATAGGATACCCATCTCCCAGAAAAACAGCACAGGAAAGAGAATTATAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000215447.2 ENSMUST00000216392.2 |
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| CDS-3UTR TCA 90 bp | GTGTGTATCAAGGGTATGTTTACATCCCAAGCAGATTGCCCTGTATCAGAAGGTTCAGAGAAAACAAGATaGCACCATAGGAGACAAGCA | + |
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Preference number: 4 (lower is better) Translates to: VCIKGMFTSQADCPVSEGSEKTR*HHRRQA Trigger: TGCTTGTCTCCTATGGTGTCATCTTGTTTTCTCTGA...ACCTTCTGATACAGGGCAATCTGCTTGGGATGTAAACATACCCTTGATACACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215447.2 ENSMUST00000216392.2 |
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| CDS-3UTR TCA 90 bp | AAGGGTATGTTTACATCCCAAGCAGATTGCCCTGTATCAGAAGGTCTGCATTCTTCAGAGAAAACAAGATaGCACCATAGGAGACAAGCA | + |
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Preference number: 4 (lower is better) Translates to: KGMFTSQADCPVSEGLHSSEKTR*HHRRQA Trigger: TGCTTGTCTCCTATGGTGTCATCTTGTTTTCTCTGA...AGAATGCAGACCTTCTGATACAGGGCAATCTGCTTGGGATGTAAACATACCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215447.2 ENSMUST00000216392.2 |
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| CDS-3UTR TCA 90 bp | GTATGTTTACATCCCAAGCAGATTGCCCTGTATCAGAAGGTCTGCATTCTGGCTATTCCAGTGAAAAAGTaGATAGCAAACAGTTGTGTC | + |
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Preference number: 4 (lower is better) Translates to: VCLHPKQIALYQKVCILAIPVKK*IANSCV Trigger: GACACAACTGTTTGCTATTCACTTTTTCACTGGAAT...AGCCAGAATGCAGACCTTCTGATACAGGGCAATCTGCTTGGGATGTAAACATAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000215447.2 ENSMUST00000216392.2 |
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| CDS-3UTR GCA 90 bp | ATTATAATTCTCTTTCCTGTGCTGTTTTTCTGGGAGATGGGTATCCTATCTCTGATACCATCACCAAAATaGCACAGAGTCTCCTGGTCA | + |
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Preference number: 4 (lower is better) Translates to: IIILFPVLFFWEMGILSLIPSPK*HRVSWS Trigger: TGACCAGGAGACTCTGTGGCATTTTGGTGATGGTAT...CAGAGATAGGATACCCATCTCCCAGAAAAACAGCACAGGAAAGAGAATTATAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000215447.2 ENSMUST00000216392.2 |
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| CDS-3UTR TCA 90 bp | ATTATAATTCTCTTTCCTGTGCTGTTTTTCTGGGAGATGGGTATCCTATCTCTGGTCATAGGCCATGGCTaGCAAAATAATCACCTCTAT | + |
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Preference number: 4 (lower is better) Translates to: IIILFPVLFFWEMGILSLVIGHG*QNNHLY Trigger: ATAGAGGTGATTATTTTGTCAGCCATGGCCTATGAC...CAGAGATAGGATACCCATCTCCCAGAAAAACAGCACAGGAAAGAGAATTATAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000215447.2 ENSMUST00000216392.2 |
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| CDS-3UTR CCA 90 bp | AATGATAGCTTATATTTGCATAACAAATGTTCTTACCCACTGGTCTACCTTCCCAGCACAACTGTAATGTaGGATCCACATGTGGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: NDSLYLHNKCSYPLVYLPSTTVM*DPHVER Trigger: TCTCTCCACATGTGGATCCCACATTACAGTTGTGCT...GGGAAGGTAGACCAGTGGGTAAGAACATTTGTTATGCAAATATAAGCTATCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215447.2 ENSMUST00000216392.2 |
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| CDS-3UTR TCA 90 bp | CTGATTCATCACTTTGTCTATCCCTCAATTAGTTGTCACTTTCAAACATGGATGACAGATAATGATCAATaGCATTGGGTCCACAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: LIHHFVYPSISCHFQTWMTDNDQ*HWVHRR Trigger: CCTTCTGTGGACCCAATGTCATTGATCATTATCTGT...CATCCATGTTTGAAAGTGACAACTAATTGAGGGATAGACAAAGTGATGAATCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215447.2 ENSMUST00000216392.2 |
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| CDS-3UTR TCA 90 bp | CTGATTCATCACTTTGTCTATCCCTCAATTAGTTGTCACTTTCAAACATGGATGATTCCAGTGAAAAAGTaGATAGCAAACAGTTGTGTC | + |
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Preference number: 4 (lower is better) Translates to: LIHHFVYPSISCHFQTWMIPVKK*IANSCV Trigger: GACACAACTGTTTGCTATTCACTTTTTCACTGGAAT...CATCCATGTTTGAAAGTGACAACTAATTGAGGGATAGACAAAGTGATGAATCAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000215447.2 ENSMUST00000216392.2 |
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| CDS-3UTR CAA 90 bp | CCCAAGCAGATTGCCCTGTATCAGAAGGTCTGCATTCTGGCTGGATCATATGAAACCACAATCATAATGTaGCCCCCAATAGTTGCAAGG | + |
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Preference number: 5 (lower is better) Translates to: PKQIALYQKVCILAGSYETTIIM*PPIVAR Trigger: CCTTGCAACTATTGGGGGCAACATTATGATTGTGGT...TTCATATGATCCAGCCAGAATGCAGACCTTCTGATACAGGGCAATCTGCTTGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000215447.2 ENSMUST00000216392.2 |
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| CDS-3UTR CAA 90 bp | AATGATAGCTTATATTTGCATAACAAATGTTCTTACCCACTGGTCTACCTTCCCACCACAATCATAATGTaGCCCCCAATAGTTGCAAGG | + |
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Preference number: 5 (lower is better) Translates to: NDSLYLHNKCSYPLVYLPTTIIM*PPIVAR Trigger: CCTTGCAACTATTGGGGGCAACATTATGATTGTGGT...GGGAAGGTAGACCAGTGGGTAAGAACATTTGTTATGCAAATATAAGCTATCATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000215447.2 ENSMUST00000216392.2 |
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| CDS TCA 72 bp | GCTGACAAAATAATCACCTCTATTCCAGTGAAAAAGTaGATAGCAAACAGTTGTGTCATGCAACATTCAAAG | + |
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Preference number: 6 (lower is better) Translates to: ADKIITSIPVKK*IANSCVMQHSK Trigger: CTTTGAATGTTGCATGACACAACTGTTTGCTATTCACTTTTTCACTGGAATAGAGGTGATTATTTTGTCAGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000190757.3 ENSMUST00000215447.2 ENSMUST00000216392.2 |
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