Pregenerated sensors for OLFR1226 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075097Ensembl transcript IDs: ENSMUST00000099790.2, ENSMUST00000214709.2, ENSMUST00000215562.2, ENSMUST00000215987.2, ENSMUST00000216445.2, ENSMUST00000217601.2, ENSMUST00000220416.2
Found 139 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGTGTCAGCATTTGGAGGCTGATTATGGGATGAATCCCCGGGCCTaGCAGTCTCTAGATGGTCCATCCTTTCGTCTCAGCTCCAAACTT | + |
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Preference number: 1 (lower is better) Translates to: WCQHLEADYGMNPRA*QSLDGPSFRLSSKL Trigger: AAGTTTGGAGCTGAGACGAAAGGATGGACCATCTAGAGACTGCCAGGCCCGGGGATTCATCCCATAATCAGCCTCCAAATGCTGACACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216445.2 |
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| 3UTR CCA 90 bp | ATTTCAGGGAATAATCAATACTCTTCTCTGGCTTGTGCTTTCACATaGGTTTTCACCATGAACTCTGTCATACTGCTCATTCGGTTGGGG | + |
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Preference number: 1 (lower is better) Translates to: ISGNNQYSSLACAFT*VFTMNSVILLIRLG Trigger: CCCCAACCGAATGAGCAGTATGACAGAGTTCATGGTGAAAACCCATGTGAAAGCACAAGCCAGAGAAGAGTATTGATTATTCCCTGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216445.2 |
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| 3UTR TCA 90 bp | TACTGCTCATTCGGTTGGGGTAGTCACACGACGCCATGGGAATTCTaGTTGTCTATTCCTTTTAGAAATTCAAGAACTGACTCAAATTAT | + |
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Preference number: 1 (lower is better) Translates to: YCSFGWGSHTTPWEF*LSIPFRNSRTDSNY Trigger: ATAATTTGAGTCAGTTCTTGAATTTCTAAAAGGAATAGACAATCAGAATTCCCATGGCGTCGTGTGACTACCCCAACCGAATGAGCAGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216445.2 |
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| 3UTR CCA 90 bp | TTTGTAGGCAAACGGTTGGATCTTGAGAAGATCATCCTGAGTGCATaGTATGTACTCACTTATAAGTGGATATTAGCCATAAGATACAGG | + |
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Preference number: 1 (lower is better) Translates to: FVGKRLDLEKIILSA*YVLTYKWILAIRYR Trigger: CCTGTATCTTATGGCTAATATCCACTTATAAGTGAGTACATACCATGCACTCAGGATGATCTTCTCAAGATCCAACCGTTTGCCTACAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
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| 3UTR CCA 90 bp | CTTGAGAAGATCATCCTGAGTGCATGGTATGTACTCACTTATAAGTaGATATTAGCCATAAGATACAGGATCCAGCAACACATATACTTC | + |
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Preference number: 1 (lower is better) Translates to: LEKIILSAWYVLTYK*ILAIRYRIQQHIYF Trigger: GAAGTATATGTGTTGCTGGATCCTGTATCTTATGGCTAATATCCACTTATAAGTGAGTACATACCATGCACTCAGGATGATCTTCTCAAG 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
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| 3UTR TCA 90 bp | AAAGATGTACCAGCTATGAGAAAGAAAGATGAGAAATGCAGGAATTaGGTGGGGAAGTACCCTAGCATATCCAAAATGTGTTACAAATTT | + |
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Preference number: 1 (lower is better) Translates to: KDVPAMRKKDEKCRN*VGKYPSISKMCYKF Trigger: AAATTTGTAACACATTTTGGATATGCTAGGGTACTTCCCCACTCAATTCCTGCATTTCTCATCTTTCTTTCTCATAGCTGGTACATCTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216445.2 |
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| 3UTR-3UTR TCA 90 bp | TCCTTGGGTACTTTCTCTAGCTCCTCTAATGAGGGCCCCGTGTTCCGTCCAATAGAGAAATGCAGGAATTaGGTGGGGAAGTACCCTAGC | + |
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Preference number: 2 (lower is better) Translates to: SLGTFSSSSNEGPVFRPIEKCRN*VGKYPS Trigger: GCTAGGGTACTTCCCCACTCAATTCCTGCATTTCTC...TATTGGACGGAACACGGGGCCCTCATTAGAGGAGCTAGAGAAAGTACCCAAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216445.2 |
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| 3UTR-3UTR GCA 90 bp | GATTATGGGATGAATCCCCGGGCCTGGCAGTCTCTAGATGGTCCATCCTTTCGTCTCTTCTCTGGCTTGTaGTTTCACATGGGTTTTCAC | + |
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Preference number: 2 (lower is better) Translates to: DYGMNPRAWQSLDGPSFRLFSGL*FHMGFH Trigger: GTGAAAACCCATGTGAAAGCACAAGCCAGAGAAGAG...ACGAAAGGATGGACCATCTAGAGACTGCCAGGCCCGGGGATTCATCCCATAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216445.2 |
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| 3UTR-3UTR TCA 90 bp | GATTATGGGATGAATCCCCGGGCCTGGCAGTCTCTAGATGGTCCATCCTTTCGTAGGGTTCATGTTAGTTaGCTCTGTTGGTCTTCCTAT | + |
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Preference number: 2 (lower is better) Translates to: DYGMNPRAWQSLDGPSFRRVHVS*LCWSSY Trigger: ATAGGAAGACCAACAGAGTCAACTAACATGAACCCT...ACGAAAGGATGGACCATCTAGAGACTGCCAGGCCCGGGGATTCATCCCATAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216445.2 |
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| 3UTR-3UTR CCA 90 bp | CCATCCTTTCGTCTCAGCTCCAAACTTTGTCTATGTAATTCCTTCCATGGGTGTCTCACTGCCCTCTCCTaGCAAACCCCTCCTACTATC | + |
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Preference number: 2 (lower is better) Translates to: PSFRLSSKLCLCNSFHGCLTALS*QTPPTI Trigger: GATAGTAGGAGGGGTTTGCCAGGAGAGGGCAGTGAG...ACACCCATGGAAGGAATTACATAGACAAAGTTTGGAGCTGAGACGAAAGGATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216445.2 |
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| 3UTR-3UTR TCA 90 bp | TCCTTGGGTACTTTCTCTAGCTCCTCTAATGAGGGCCCCGTGTTCCGTCCAATAACGCCATGGGAATTCTaGTTGTCTATTCCTTTTAGA | + |
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Preference number: 2 (lower is better) Translates to: SLGTFSSSSNEGPVFRPITPWEF*LSIPFR Trigger: TCTAAAAGGAATAGACAATCAGAATTCCCATGGCGT...TATTGGACGGAACACGGGGCCCTCATTAGAGGAGCTAGAGAAAGTACCCAAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216445.2 |
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| 3UTR-3UTR TCA 90 bp | GAGAAGATCATCCTGAGTGCATGGTATGTACTCACTTATAAGTGGATATTAGCCCTGTGCTACCATGACTaGCTTCTGCCATGGGTGTTG | + |
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Preference number: 2 (lower is better) Translates to: EKIILSAWYVLTYKWILALCYHD*LLPWVL Trigger: CAACACCCATGGCAGAAGTCAGTCATGGTAGCACAG...GGCTAATATCCACTTATAAGTGAGTACATACCATGCACTCAGGATGATCTTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
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| 3UTR-3UTR GCA 90 bp | CCATCCTTTCGTCTCAGCTCCAAACTTTGTCTATGTAATTCCTTCCATGGGTGTTCTCCAAGCTCCATGTaGTGTTTAGTTGTGGGTCTC | + |
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Preference number: 2 (lower is better) Translates to: PSFRLSSKLCLCNSFHGCSPSSM*CLVVGL Trigger: GAGACCCACAACTAAACAGCACATGGAGCTTGGAGA...ACACCCATGGAAGGAATTACATAGACAAAGTTTGGAGCTGAGACGAAAGGATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216445.2 |
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| 3UTR-3UTR TCA 90 bp | GATCTTGAGAAGATCATCCTGAGTGCATGGTATGTACTCACTTATAAGTGGATACTGTGCTACCATGACTaGCTTCTGCCATGGGTGTTG | + |
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Preference number: 2 (lower is better) Translates to: DLEKIILSAWYVLTYKWILCYHD*LLPWVL Trigger: CAACACCCATGGCAGAAGTCAGTCATGGTAGCACAG...TATCCACTTATAAGTGAGTACATACCATGCACTCAGGATGATCTTCTCAAGATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
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| 3UTR-3UTR TCA 90 bp | CCATCCTTTCGTCTCAGCTCCAAACTTTGTCTATGTAATTCCTTCCATGGGTGTCATGGGTTTTCACCATaGACTCTGTCATACTGCTCA | + |
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Preference number: 2 (lower is better) Translates to: PSFRLSSKLCLCNSFHGCHGFSP*TLSYCS Trigger: TGAGCAGTATGACAGAGTTCATGGTGAAAACCCATG...ACACCCATGGAAGGAATTACATAGACAAAGTTTGGAGCTGAGACGAAAGGATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216445.2 |
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| 3UTR-3UTR GCA 90 bp | GTCTATGTAATTCCTTCCATGGGTGTTTTGTTCCCAATTCTAAGAAGGGGCAAATTATATCTCACTCACTaGCCTCTCCTGGCAAACCCC | + |
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Preference number: 2 (lower is better) Translates to: VYVIPSMGVLFPILRRGKLYLTH*PLLANP Trigger: GGGGTTTGCCAGGAGAGGGCAGTGAGTGAGATATAA...TTTGCCCCTTCTTAGAATTGGGAACAAAACACCCATGGAAGGAATTACATAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216445.2 |
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| 3UTR-3UTR TCA 90 bp | GAGAAGATCATCCTGAGTGCATGGTATGTACTCACTTATAAGTGGATATTAGCCAAAACTGTGCTACCATaGCTGACTTCTGCCATGGGT | + |
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Preference number: 2 (lower is better) Translates to: EKIILSAWYVLTYKWILAKTVLP*LTSAMG Trigger: ACCCATGGCAGAAGTCAGTCATGGTAGCACAGTTTT...GGCTAATATCCACTTATAAGTGAGTACATACCATGCACTCAGGATGATCTTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
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| 3UTR-3UTR TCA 90 bp | TGCATGAAAAGACACAGGAAAGTACTATGTCCATTTATTTCTTGCTGCCTTATTCTGTGCTACCATGACTaGCTTCTGCCATGGGTGTTG | + |
|
Preference number: 2 (lower is better) Translates to: CMKRHRKVLCPFISCCLILCYHD*LLPWVL Trigger: CAACACCCATGGCAGAAGTCAGTCATGGTAGCACAG...AATAAGGCAGCAAGAAATAAATGGACATAGTACTTTCCTGTGTCTTTTCATGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
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| 3UTR-3UTR TCA 90 bp | GGGTGTTTTGTTCCCAATTCTAAGAAGGGGCAAAGTGTCCACACTTTGGTCTTCACATTTCCTACCATATaGCCATTTCAGGGAATAATC | + |
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Preference number: 2 (lower is better) Translates to: GCFVPNSKKGQSVHTLVFTFPTI*PFQGII Trigger: GATTATTCCCTGAAATGGTCATATGGTAGGAAATGT...GAAGACCAAAGTGTGGACACTTTGCCCCTTCTTAGAATTGGGAACAAAACACCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216445.2 |
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| 3UTR-3UTR CCA 90 bp | TTGTTCCCAATTCTAAGAAGGGGCAAAGTGTCCACACTTTGGTCTTCATTCTTCGCTTGTGCTTTCACATaGGTTTTCACCATGAACTCT | + |
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Preference number: 2 (lower is better) Translates to: LFPILRRGKVSTLWSSFFACAFT*VFTMNS Trigger: AGAGTTCATGGTGAAAACCCATGTGAAAGCACAAGC...GAAGAATGAAGACCAAAGTGTGGACACTTTGCCCCTTCTTAGAATTGGGAACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216445.2 |
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| 3UTR-3UTR TCA 90 bp | GAGAAGATCATCCTGAGTGCATGGTATGTACTCACTTATAAGTGGATATTAGCCGGCATAGATAGTGCATaGAAAGACACAGGAAAGTAC | + |
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Preference number: 2 (lower is better) Translates to: EKIILSAWYVLTYKWILAGIDSA*KDTGKY Trigger: GTACTTTCCTGTGTCTTTTCATGCACTATCTATGCC...GGCTAATATCCACTTATAAGTGAGTACATACCATGCACTCAGGATGATCTTCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
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| 3UTR-3UTR GCA 90 bp | CATACTGGGTTTGGTAAGAGCCCTTGTGCTCTACAGTATTTGACTTCACTAATAGTTTGCACTATAAGATaGTCTTACCCACTGGTCTGT | + |
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Preference number: 2 (lower is better) Translates to: HTGFGKSPCALQYLTSLIVCTIR*SYPLVC Trigger: ACAGACCAGTGGGTAAGAGCATCTTATAGTGCAAAC...TATTAGTGAAGTCAAATACTGTAGAGCACAAGGGCTCTTACCAAACCCAGTATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
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| 3UTR-3UTR CCA 90 bp | CATACTGGGTTTGGTAAGAGCCCTTGTGCTCTACAGTATTTGACTTCACTAATAGATGCTCTTACCCACTaGTCTGTCTCCAAATTATTG | + |
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Preference number: 2 (lower is better) Translates to: HTGFGKSPCALQYLTSLIDALTH*SVSKLL Trigger: CAATAATTTGGAGACAGACCAGTGGGTAAGAGCATC...TATTAGTGAAGTCAAATACTGTAGAGCACAAGGGCTCTTACCAAACCCAGTATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
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| 3UTR-3UTR CCA 90 bp | GGGTGTTTTGTTCCCAATTCTAAGAAGGGGCAAAGTGTCCACACTTTGGTCTTCGAAATGTATTCCAGTTaGAGTTTTCCATGTGTGATA | + |
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Preference number: 2 (lower is better) Translates to: GCFVPNSKKGQSVHTLVFEMYSS*SFPCVI Trigger: TATCACACATGGAAAACTCCAACTGGAATACATTTC...GAAGACCAAAGTGTGGACACTTTGCCCCTTCTTAGAATTGGGAACAAAACACCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000216445.2 |
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| 3UTR-3UTR TCA 90 bp | TGCATGAAAAGACACAGGAAAGTACTATGTCCATTTATTTCTTGCTGCCTTATTAAAACTGTGCTACCATaGCTGACTTCTGCCATGGGT | + |
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Preference number: 2 (lower is better) Translates to: CMKRHRKVLCPFISCCLIKTVLP*LTSAMG Trigger: ACCCATGGCAGAAGTCAGTCATGGTAGCACAGTTTT...AATAAGGCAGCAAGAAATAAATGGACATAGTACTTTCCTGTGTCTTTTCATGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
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| 3UTR-3UTR TCA 90 bp | GATCTTGAGAAGATCATCCTGAGTGCATGGTATGTACTCACTTATAAGTGGATAGGCATAGATAGTGCATaGAAAGACACAGGAAAGTAC | + |
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Preference number: 2 (lower is better) Translates to: DLEKIILSAWYVLTYKWIGIDSA*KDTGKY Trigger: GTACTTTCCTGTGTCTTTTCATGCACTATCTATGCC...TATCCACTTATAAGTGAGTACATACCATGCACTCAGGATGATCTTCTCAAGATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
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| 3UTR-3UTR TCA 90 bp | GAGAAGATCATCCTGAGTGCATGGTATGTACTCACTTATAAGTGGATATTAGCCAGTGAATGTGTGATCTaGGAATCAGTTTTGACACCT | + |
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Preference number: 2 (lower is better) Translates to: EKIILSAWYVLTYKWILASECVI*ESVLTP Trigger: AGGTGTCAAAACTGATTCTCAGATCACACATTCACT...GGCTAATATCCACTTATAAGTGAGTACATACCATGCACTCAGGATGATCTTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
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| 3UTR-3UTR GCA 90 bp | CTTGAGAAGATCATCCTGAGTGCATGGTATGTACTCACTTATAAGTGGATATTAACCATGACTGACTTCTaGCATGGGTGTTGTGAATCA | + |
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Preference number: 2 (lower is better) Translates to: LEKIILSAWYVLTYKWILTMTDF*HGCCES Trigger: TGATTCACAACACCCATGGCAGAAGTCAGTCATGGT...TAATATCCACTTATAAGTGAGTACATACCATGCACTCAGGATGATCTTCTCAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
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| 3UTR-3UTR TCA 90 bp | CTTGAGAAGATCATCCTGAGTGCATGGTATGTACTCACTTATAAGTGGATATTAGGCATAGATAGTGCATaGAAAGACACAGGAAAGTAC | + |
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Preference number: 2 (lower is better) Translates to: LEKIILSAWYVLTYKWILGIDSA*KDTGKY Trigger: GTACTTTCCTGTGTCTTTTCATGCACTATCTATGCC...TAATATCCACTTATAAGTGAGTACATACCATGCACTCAGGATGATCTTCTCAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
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| 3UTR-3UTR GCA 90 bp | TATTTTCTTAAGACAAGGTCTCCAATGAACTTTAACCATACTGGGTTTGGTAAGACCATGACTGACTTCTaGCATGGGTGTTGTGAATCA | + |
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Preference number: 2 (lower is better) Translates to: YFLKTRSPMNFNHTGFGKTMTDF*HGCCES Trigger: TGATTCACAACACCCATGGCAGAAGTCAGTCATGGT...CTTACCAAACCCAGTATGGTTAAAGTTCATTGGAGACCTTGTCTTAAGAAAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
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| 3UTR-3UTR CCA 90 bp | CTTGAGAAGATCATCCTGAGTGCATGGTATGTACTCACTTATAAGTGGATATTAGATGCTCTTACCCACTaGTCTGTCTCCAAATTATTG | + |
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Preference number: 2 (lower is better) Translates to: LEKIILSAWYVLTYKWILDALTH*SVSKLL Trigger: CAATAATTTGGAGACAGACCAGTGGGTAAGAGCATC...TAATATCCACTTATAAGTGAGTACATACCATGCACTCAGGATGATCTTCTCAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
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| 3UTR-3UTR CCA 90 bp | TTGTTCCCAATTCTAAGAAGGGGCAAAGTGTCCACACTTTGGTCTTCATTCTTCACATACACTTTCCAGTaGAAATTAAGACAATCTCAG | + |
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Preference number: 2 (lower is better) Translates to: LFPILRRGKVSTLWSSFFTYTFQ*KLRQSQ Trigger: CTGAGATTGTCTTAATTTCCACTGGAAAGTGTATGT...GAAGAATGAAGACCAAAGTGTGGACACTTTGCCCCTTCTTAGAATTGGGAACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216445.2 |
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| 3UTR-3UTR TCA 90 bp | CTTGAGAAGATCATCCTGAGTGCATGGTATGTACTCACTTATAAGTGGATATTAAGTGAATGTGTGATCTaGGAATCAGTTTTGACACCT | + |
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Preference number: 2 (lower is better) Translates to: LEKIILSAWYVLTYKWILSECVI*ESVLTP Trigger: AGGTGTCAAAACTGATTCTCAGATCACACATTCACT...TAATATCCACTTATAAGTGAGTACATACCATGCACTCAGGATGATCTTCTCAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
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| 3UTR-3UTR TCA 90 bp | CTTTGGTCTTCATTCTTCTTGAGTTTCATGTGTTTTGCAAATTGTGAACTCACAAAGAATAGCCATTGGTaGAAGGGTGAGAAACATGGA | + |
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Preference number: 2 (lower is better) Translates to: LWSSFFLSFMCFANCELTKNSHW*KGEKHG Trigger: TCCATGTTTCTCACCCTTTCACCAATGGCTATTCTT...TGTGAGTTCACAATTTGCAAAACACATGAAACTCAAGAAGAATGAAGACCAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216445.2 |
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| 3UTR-3UTR GCA 90 bp | TGCATGAAAAGACACAGGAAAGTACTATGTCCATTTATTTCTTGCTGCCTTATTGTTTGCACTATAAGATaGTCTTACCCACTGGTCTGT | + |
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Preference number: 2 (lower is better) Translates to: CMKRHRKVLCPFISCCLIVCTIR*SYPLVC Trigger: ACAGACCAGTGGGTAAGAGCATCTTATAGTGCAAAC...AATAAGGCAGCAAGAAATAAATGGACATAGTACTTTCCTGTGTCTTTTCATGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
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| 3UTR-3UTR GCA 90 bp | TATTTTCTTAAGACAAGGTCTCCAATGAACTTTAACCATACTGGGTTTGGTAAGGTTTGCACTATAAGATaGTCTTACCCACTGGTCTGT | + |
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Preference number: 2 (lower is better) Translates to: YFLKTRSPMNFNHTGFGKVCTIR*SYPLVC Trigger: ACAGACCAGTGGGTAAGAGCATCTTATAGTGCAAAC...CTTACCAAACCCAGTATGGTTAAAGTTCATTGGAGACCTTGTCTTAAGAAAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
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| 3UTR-3UTR CCA 90 bp | TATTTTCTTAAGACAAGGTCTCCAATGAACTTTAACCATACTGGGTTTGGTAAGGATGCTCTTACCCACTaGTCTGTCTCCAAATTATTG | + |
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Preference number: 2 (lower is better) Translates to: YFLKTRSPMNFNHTGFGKDALTH*SVSKLL Trigger: CAATAATTTGGAGACAGACCAGTGGGTAAGAGCATC...CTTACCAAACCCAGTATGGTTAAAGTTCATTGGAGACCTTGTCTTAAGAAAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
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| 3UTR-3UTR CCA 90 bp | TGCATGAAAAGACACAGGAAAGTACTATGTCCATTTATTTCTTGCTGCCTTATTGATGCTCTTACCCACTaGTCTGTCTCCAAATTATTG | + |
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Preference number: 2 (lower is better) Translates to: CMKRHRKVLCPFISCCLIDALTH*SVSKLL Trigger: CAATAATTTGGAGACAGACCAGTGGGTAAGAGCATC...AATAAGGCAGCAAGAAATAAATGGACATAGTACTTTCCTGTGTCTTTTCATGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
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| 3UTR-3UTR CCA 90 bp | CTTTGGTCTTCATTCTTCTTGAGTTTCATGTGTTTTGCAAATTGTGAACTCACAATCAATACTCTTCTCTaGCTTGTGCTTTCACATGGG | + |
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Preference number: 2 (lower is better) Translates to: LWSSFFLSFMCFANCELTINTLL*LVLSHG Trigger: CCCATGTGAAAGCACAAGCCAGAGAAGAGTATTGAT...TGTGAGTTCACAATTTGCAAAACACATGAAACTCAAGAAGAATGAAGACCAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216445.2 |
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| 3UTR-3UTR GCA 90 bp | GATCTTGAGAAGATCATCCTGAGTGCATGGTATGTACTCACTTATAAGTGGATATGTCCTACTAAAAAGTaGTCTATTGAGTTCTTTGGT | + |
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Preference number: 2 (lower is better) Translates to: DLEKIILSAWYVLTYKWICPTKK*SIEFFG Trigger: ACCAAAGAACTCAATAGAGCACTTTTTAGTAGGACA...TATCCACTTATAAGTGAGTACATACCATGCACTCAGGATGATCTTCTCAAGATC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
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| 3UTR CCA 72 bp | CATTTGGAGGCTGATTATGGGATGAATCCCCGGGCCTaGCAGTCTCTAGATGGTCCATCCTTTCGTCTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: HLEADYGMNPRA*QSLDGPSFRLS Trigger: GCTGAGACGAAAGGATGGACCATCTAGAGACTGCCAGGCCCGGGGATTCATCCCATAATCAGCCTCCAAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216445.2 |
||
| 3UTR TCA 72 bp | TTGCTAGTGTATGCAATGGTGTCAGCATTTGGAGGCTaGTTATGGGATGAATCCCCGGGCCTGGCAGTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: LLVYAMVSAFGG*LWDESPGLAVS Trigger: AGAGACTGCCAGGCCCGGGGATTCATCCCATAATCAGCCTCCAAATGCTGACACCATTGCATACACTAGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216445.2 |
||
| 3UTR CCA 72 bp | AGCTATTCACTTTATATCTCACTCACTGCCCTCTCCTaGCAAACCCCTCCTACTATCCATCCCTCCATCCCC | + |
|
Preference number: 3 (lower is better) Translates to: SYSLYISLTALS*QTPPTIHPSIP Trigger: GGGGATGGAGGGATGGATAGTAGGAGGGGTTTGCCAGGAGAGGGCAGTGAGTGAGATATAAAGTGAATAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216445.2 |
||
| 3UTR CCA 72 bp | TTATGGGATGAATCCCCGGGCCTGGCAGTCTCTAGATaGTCCATCCTTTCGTCTCAGCTCCAAACTTTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: LWDESPGLAVSR*SILSSQLQTLS Trigger: AGACAAAGTTTGGAGCTGAGACGAAAGGATGGACCATCTAGAGACTGCCAGGCCCGGGGATTCATCCCATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216445.2 |
||
| 3UTR CCA 72 bp | ATTCCACCTATAGGGTTACAGACCCCTTTAGCTCCTTaGGTACTTTCTCTAGCTCCTCTAATGAGGGCCCCG | + |
|
Preference number: 3 (lower is better) Translates to: IPPIGLQTPLAP*VLSLAPLMRAP Trigger: CGGGGCCCTCATTAGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGGTCTGTAACCCTATAGGTGGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216445.2 |
||
| 3UTR GCA 72 bp | ATATCAGGGTCCTTTCCACAGAATCTTGCTAGTGTATaGAATGGTGTCAGCATTTGGAGGCTGATTATGGGA | + |
|
Preference number: 3 (lower is better) Translates to: ISGSFPQNLASV*NGVSIWRLIMG Trigger: TCCCATAATCAGCCTCCAAATGCTGACACCATTGCATACACTAGCAAGATTCTGTGGAAAGGACCCTGATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216445.2 |
||
| 3UTR TCA 72 bp | TTCGGTTGGGGTAGTCACACGACGCCATGGGAATTCTaGTTGTCTATTCCTTTTAGAAATTCAAGAACTGAC | + |
|
Preference number: 3 (lower is better) Translates to: FGWGSHTTPWEF*LSIPFRNSRTD Trigger: GTCAGTTCTTGAATTTCTAAAAGGAATAGACAATCAGAATTCCCATGGCGTCGTGTGACTACCCCAACCGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216445.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGTGTTTTGTTCCCAATTCTAAGAAGGGGCAAAGTGTCCACACTTTGGTCTTCAGAAATGTATTCCAGTaGGAGTTTTCCATGTGTGAT | + |
|
Preference number: 3 (lower is better) Translates to: GCFVPNSKKGQSVHTLVFRNVFQ*EFSMCD Trigger: ATCACACATGGAAAACTCCAACTGGAATACATTTCT...GAAGACCAAAGTGTGGACACTTTGCCCCTTCTTAGAATTGGGAACAAAACACCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000216445.2 |
||
| 3UTR TCA 72 bp | AAGCATCATGAATTTTGTAGGCAAACGGTTGGATCTTaGGAAGATCATCCTGAGTGCATGGTATGTACTCAC | + |
|
Preference number: 3 (lower is better) Translates to: KHHEFCRQTVGS*EDHPECMVCTH Trigger: GTGAGTACATACCATGCACTCAGGATGATCTTCTCAAGATCCAACCGTTTGCCTACAAAATTCATGATGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
||
| 3UTR TCA 72 bp | AGACCAAGCTCTACATTTGCTAAGTATGTGCAAGGGTaGGGGGAATATCTATACAGCCTGTGTATGTTCATT | + |
|
Preference number: 3 (lower is better) Translates to: RPSSTFAKYVQG*GEYLYSLCMFI Trigger: AATGAACATACACAGGCTGTATAGATATTCCCCTCACCCTTGCACATACTTAGCAAATGTAGAGCTTGGTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216445.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTTGGTCTTCATTCTTCTTGAGTTTCATGTGTTTTGCAAATTGTGAACTCACAGTACAGGCAACAGTTTaGGGGATAGGTCCCTTTACA | + |
|
Preference number: 3 (lower is better) Translates to: LWSSFFLSFMCFANCELTVQATV*GIGPFT Trigger: TGTAAAGGGACCTATCCCCAAAACTGTTGCCTGTAC...TGTGAGTTCACAATTTGCAAAACACATGAAACTCAAGAAGAATGAAGACCAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216445.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGTTCCCAATTCTAAGAAGGGGCAAAGTGTCCACACTTTGGTCTTCATTCTTCTTAAGGTGGTTTCATTaGGACATGGTAGAACATTTG | + |
|
Preference number: 3 (lower is better) Translates to: LFPILRRGKVSTLWSSFFLRWFH*DMVEHL Trigger: CAAATGTTCTACCATGTCCAAATGAAACCACCTTAA...GAAGAATGAAGACCAAAGTGTGGACACTTTGCCCCTTCTTAGAATTGGGAACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216445.2 |
||
| 3UTR TCA 72 bp | TCTTGCTGCCTTATTTTCTTAAGACAAGGTCTCCAATaGACTTTAACCATACTGGGTTTGGTAAGAGCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: SCCLIFLRQGLQ*TLTILGLVRAL Trigger: AAGGGCTCTTACCAAACCCAGTATGGTTAAAGTTCATTGGAGACCTTGTCTTAAGAAAATAAGGCAGCAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
||
| 3UTR CCA 72 bp | ATCATCCTGAGTGCATGGTATGTACTCACTTATAAGTaGATATTAGCCATAAGATACAGGATCCAGCAACAC | + |
|
Preference number: 3 (lower is better) Translates to: IILSAWYVLTYK*ILAIRYRIQQH Trigger: GTGTTGCTGGATCCTGTATCTTATGGCTAATATCCACTTATAAGTGAGTACATACCATGCACTCAGGATGAT 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGAAGATCATCCTGAGTGCATGGTATGTACTCACTTATAAGTGGATATTAGCCGTGTGTGTGTGTTGTTaGTGTACCTATATGAATAGT | + |
|
Preference number: 3 (lower is better) Translates to: EKIILSAWYVLTYKWILAVCVCC*CTYMNS Trigger: ACTATTCATATAGGTACACAAACAACACACACACAC...GGCTAATATCCACTTATAAGTGAGTACATACCATGCACTCAGGATGATCTTCTC 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
||
| 3UTR CCA 72 bp | AAACGGTTGGATCTTGAGAAGATCATCCTGAGTGCATaGTATGTACTCACTTATAAGTGGATATTAGCCATA | + |
|
Preference number: 3 (lower is better) Translates to: KRLDLEKIILSA*YVLTYKWILAI Trigger: TATGGCTAATATCCACTTATAAGTGAGTACATACCATGCACTCAGGATGATCTTCTCAAGATCCAACCGTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTGAGAAGATCATCCTGAGTGCATGGTATGTACTCACTTATAAGTGGATATTAGTGTGTGTGTGTTGTTaGTGTACCTATATGAATAGT | + |
|
Preference number: 3 (lower is better) Translates to: LEKIILSAWYVLTYKWILVCVCC*CTYMNS Trigger: ACTATTCATATAGGTACACAAACAACACACACACAC...TAATATCCACTTATAAGTGAGTACATACCATGCACTCAGGATGATCTTCTCAAG 37% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
||
| 3UTR TCA 72 bp | TTGAGTTTCATGTGTTTTGCAAATTGTGAACTCACATaGTATGTACTCACTGATAAGTGGATATTAGCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: LSFMCFANCELT*YVLTDKWILAQ Trigger: CTGGGCTAATATCCACTTATCAGTGAGTACATATCATGTGAGTTCACAATTTGCAAAACACATGAAACTCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216445.2 |
||
| CDS-3UTR CCA 90 bp | GATTATGGGATGAATCCCCGGGCCTGGCAGTCTCTAGATGGTCCATCCTTTCGTCGCCCTTCAGAACTGTaGGCTCTCAGAGAGAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: DYGMNPRAWQSLDGPSFRRPSEL*ALRENK Trigger: CTTGTTCTCTCTGAGAGCCCACAGTTCTGAAGGGCG...ACGAAAGGATGGACCATCTAGAGACTGCCAGGCCCGGGGATTCATCCCATAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216445.2 |
||
| CDS-3UTR TCA 90 bp | TCCTTGGGTACTTTCTCTAGCTCCTCTAATGAGGGCCCCGTGTTCCGTCCAATATCACCTCCATCCCAGTaGAGAAGTGCACAGCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: SLGTFSSSSNEGPVFRPISPPSQ*RSAQQT Trigger: TGTTTGCTGTGCACTTCTTCACTGGGATGGAGGTGA...TATTGGACGGAACACGGGGCCCTCATTAGAGGAGCTAGAGAAAGTACCCAAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216445.2 |
||
| 3UTR CAA 72 bp | TATTCCACCTATAGGGTTACAGACCCCTTTAGCTCCTaGGGTACTTTCTCTAGCTCCTCTAATGAGGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: YSTYRVTDPFSS*GTFSSSSNEGP Trigger: GGGGCCCTCATTAGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGGTCTGTAACCCTATAGGTGGAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216445.2 |
||
| CDS-3UTR GCA 90 bp | TCCTTGGGTACTTTCTCTAGCTCCTCTAATGAGGGCCCCGTGTTCCGTCCAATAACAACATCACCAAAATaGCACAGAGTCTCCTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SLGTFSSSSNEGPVFRPITTSPK*HRVSWS Trigger: TGACCAGGAGACTCTGTGGCATTTTGGTGATGTTGT...TATTGGACGGAACACGGGGCCCTCATTAGAGGAGCTAGAGAAAGTACCCAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216445.2 |
||
| CDS-3UTR TCA 90 bp | GGGTGTTTTGTTCCCAATTCTAAGAAGGGGCAAAGTGTCCACACTTTGGTCTTCAGAGTCTCCTGGTCATaGTGGAGGAGTAGTGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GCFVPNSKKGQSVHTLVFRVSWS*WRSSEE Trigger: CTCTTCACTACTCCTCCATCATGACCAGGAGACTCT...GAAGACCAAAGTGTGGACACTTTGCCCCTTCTTAGAATTGGGAACAAAACACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216445.2 |
||
| CDS-3UTR TCA 90 bp | GATTATGGGATGAATCCCCGGGCCTGGCAGTCTCTAGATGGTCCATCCTTTCGTTGGCAAACACTAAAATaGCAAATATGTGTGTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: DYGMNPRAWQSLDGPSFRWQTLK*QICVCQ Trigger: CTGACACACACATATTTGTCATTTTAGTGTTTGCCA...ACGAAAGGATGGACCATCTAGAGACTGCCAGGCCCGGGGATTCATCCCATAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216445.2 |
||
| 3UTR CAA 72 bp | AAGAGACAGCTATATCAGGGTCCTTTCCACAGAATCTaGCTAGTGTATGCAATGGTGTCAGCATTTGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KRQLYQGPFHRI*LVYAMVSAFGG Trigger: GCCTCCAAATGCTGACACCATTGCATACACTAGCAAGATTCTGTGGAAAGGACCCTGATATAGCTGTCTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216445.2 |
||
| CDS-3UTR TCA 90 bp | GTCTATGTAATTCCTTCCATGGGTGTTTTGTTCCCAATTCTAAGAAGGGGCAAACAATCATCTTGGGGGTaGCAGTGGAAGAAGTGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: VYVIPSMGVLFPILRRGKQSSWG*QWKKCK Trigger: CTTGCACTTCTTCCACTGTCACCCCCAAGATGATTG...TTTGCCCCTTCTTAGAATTGGGAACAAAACACCCATGGAAGGAATTACATAGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000216445.2 |
||
| CDS-3UTR TCA 90 bp | CATACTGGGTTTGGTAAGAGCCCTTGTGCTCTACAGTATTTGACTTCACTAATACAATCATCTTGGGGGTaGCAGTGGAAGAAGTGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: HTGFGKSPCALQYLTSLIQSSWG*QWKKCK Trigger: CTTGCACTTCTTCCACTGTCACCCCCAAGATGATTG...TATTAGTGAAGTCAAATACTGTAGAGCACAAGGGCTCTTACCAAACCCAGTATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
||
| CDS-3UTR TCA 90 bp | CATACTGGGTTTGGTAAGAGCCCTTGTGCTCTACAGTATTTGACTTCACTAATATCACCTCCATCCCAGTaGAGAAGTGCACAGCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: HTGFGKSPCALQYLTSLISPPSQ*RSAQQT Trigger: TGTTTGCTGTGCACTTCTTCACTGGGATGGAGGTGA...TATTAGTGAAGTCAAATACTGTAGAGCACAAGGGCTCTTACCAAACCCAGTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
||
| CDS-3UTR TCA 90 bp | GAGAAGATCATCCTGAGTGCATGGTATGTACTCACTTATAAGTGGATATTAGCCAGAGTCTCCTGGTCATaGTGGAGGAGTAGTGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: EKIILSAWYVLTYKWILARVSWS*WRSSEE Trigger: CTCTTCACTACTCCTCCATCATGACCAGGAGACTCT...GGCTAATATCCACTTATAAGTGAGTACATACCATGCACTCAGGATGATCTTCTC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
||
| CDS-3UTR CCA 90 bp | GATCTTGAGAAGATCATCCTGAGTGCATGGTATGTACTCACTTATAAGTGGATACGCCCTTCAGAACTGTaGGCTCTCAGAGAGAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: DLEKIILSAWYVLTYKWIRPSEL*ALRENK Trigger: CTTGTTCTCTCTGAGAGCCCACAGTTCTGAAGGGCG...TATCCACTTATAAGTGAGTACATACCATGCACTCAGGATGATCTTCTCAAGATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
||
| 3UTR CAA 72 bp | GCCATGGGTGTTGTGAATCAGAAATACAGCTTAGGTTaGCACTATAAGATGCTCTTACCCACTGGTCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: AMGVVNQKYSLG*HYKMLLPTGLS Trigger: AGACAGACCAGTGGGTAAGAGCATCTTATAGTGCAAACCTAAGCTGTATTTCTGATTCACAACACCCATGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
||
| CDS-3UTR TCA 90 bp | GATCTTGAGAAGATCATCCTGAGTGCATGGTATGTACTCACTTATAAGTGGATACAATCATCTTGGGGGTaGCAGTGGAAGAAGTGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: DLEKIILSAWYVLTYKWIQSSWG*QWKKCK Trigger: CTTGCACTTCTTCCACTGTCACCCCCAAGATGATTG...TATCCACTTATAAGTGAGTACATACCATGCACTCAGGATGATCTTCTCAAGATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
||
| CDS-3UTR TCA 90 bp | GATCTTGAGAAGATCATCCTGAGTGCATGGTATGTACTCACTTATAAGTGGATATCACCTCCATCCCAGTaGAGAAGTGCACAGCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: DLEKIILSAWYVLTYKWISPPSQ*RSAQQT Trigger: TGTTTGCTGTGCACTTCTTCACTGGGATGGAGGTGA...TATCCACTTATAAGTGAGTACATACCATGCACTCAGGATGATCTTCTCAAGATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
||
| CDS-3UTR TCA 90 bp | GATCTTGAGAAGATCATCCTGAGTGCATGGTATGTACTCACTTATAAGTGGATAAGAGTCTCCTGGTCATaGTGGAGGAGTAGTGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: DLEKIILSAWYVLTYKWIRVSWS*WRSSEE Trigger: CTCTTCACTACTCCTCCATCATGACCAGGAGACTCT...TATCCACTTATAAGTGAGTACATACCATGCACTCAGGATGATCTTCTCAAGATC 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
||
| CDS-3UTR GCA 90 bp | TTGTTCCCAATTCTAAGAAGGGGCAAAGTGTCCACACTTTGGTCTTCATTCTTCCCACAGAAGGGCAGCTaGAAAGTGAAGATGATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LFPILRRGKVSTLWSSFFPQKGS*KVKMIC Trigger: ACAAATCATCTTCACTTTGCAGCTGCCCTTCTGTGG...GAAGAATGAAGACCAAAGTGTGGACACTTTGCCCCTTCTTAGAATTGGGAACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216445.2 |
||
| CDS-3UTR CCA 90 bp | CTTGAGAAGATCATCCTGAGTGCATGGTATGTACTCACTTATAAGTGGATATTACGCCCTTCAGAACTGTaGGCTCTCAGAGAGAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: LEKIILSAWYVLTYKWILRPSEL*ALRENK Trigger: CTTGTTCTCTCTGAGAGCCCACAGTTCTGAAGGGCG...TAATATCCACTTATAAGTGAGTACATACCATGCACTCAGGATGATCTTCTCAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
||
| CDS-3UTR TCA 90 bp | CTTGAGAAGATCATCCTGAGTGCATGGTATGTACTCACTTATAAGTGGATATTACAATCATCTTGGGGGTaGCAGTGGAAGAAGTGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LEKIILSAWYVLTYKWILQSSWG*QWKKCK Trigger: CTTGCACTTCTTCCACTGTCACCCCCAAGATGATTG...TAATATCCACTTATAAGTGAGTACATACCATGCACTCAGGATGATCTTCTCAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
||
| CDS-3UTR TCA 90 bp | CTTGAGAAGATCATCCTGAGTGCATGGTATGTACTCACTTATAAGTGGATATTATCACCTCCATCCCAGTaGAGAAGTGCACAGCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: LEKIILSAWYVLTYKWILSPPSQ*RSAQQT Trigger: TGTTTGCTGTGCACTTCTTCACTGGGATGGAGGTGA...TAATATCCACTTATAAGTGAGTACATACCATGCACTCAGGATGATCTTCTCAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
||
| CDS-3UTR GCA 90 bp | CCATCCTTTCGTCTCAGCTCCAAACTTTGTCTATGTAATTCCTTCCATGGGTGTGTTGCCCCCAATAGTTaGAAGGTAGATCAACAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: PSFRLSSKLCLCNSFHGCVAPNS*KVDQQK Trigger: TTTTTGTTGATCTACCTTGCAACTATTGGGGGCAAC...ACACCCATGGAAGGAATTACATAGACAAAGTTTGGAGCTGAGACGAAAGGATGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216445.2 |
||
| CDS-3UTR GCA 90 bp | CATACTGGGTTTGGTAAGAGCCCTTGTGCTCTACAGTATTTGACTTCACTAATAACAACATCACCAAAATaGCACAGAGTCTCCTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: HTGFGKSPCALQYLTSLITTSPK*HRVSWS Trigger: TGACCAGGAGACTCTGTGGCATTTTGGTGATGTTGT...TATTAGTGAAGTCAAATACTGTAGAGCACAAGGGCTCTTACCAAACCCAGTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
||
| CDS-3UTR CCA 90 bp | TATTTTCTTAAGACAAGGTCTCCAATGAACTTTAACCATACTGGGTTTGGTAAGCGCCCTTCAGAACTGTaGGCTCTCAGAGAGAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: YFLKTRSPMNFNHTGFGKRPSEL*ALRENK Trigger: CTTGTTCTCTCTGAGAGCCCACAGTTCTGAAGGGCG...CTTACCAAACCCAGTATGGTTAAAGTTCATTGGAGACCTTGTCTTAAGAAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
||
| 3UTR CAA 72 bp | CCAAACTTTGTCTATGTAATTCCTTCCATGGGTGTTTaGTTCCCAATTCTAAGAAGGGGCAAAGTGTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: PNFVYVIPSMGV*FPILRRGKVST Trigger: TGTGGACACTTTGCCCCTTCTTAGAATTGGGAACAAAACACCCATGGAAGGAATTACATAGACAAAGTTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216445.2 |
||
| CDS-3UTR TCA 90 bp | TATTTTCTTAAGACAAGGTCTCCAATGAACTTTAACCATACTGGGTTTGGTAAGCAATCATCTTGGGGGTaGCAGTGGAAGAAGTGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: YFLKTRSPMNFNHTGFGKQSSWG*QWKKCK Trigger: CTTGCACTTCTTCCACTGTCACCCCCAAGATGATTG...CTTACCAAACCCAGTATGGTTAAAGTTCATTGGAGACCTTGTCTTAAGAAAATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
||
| CDS-3UTR TCA 90 bp | TATTTTCTTAAGACAAGGTCTCCAATGAACTTTAACCATACTGGGTTTGGTAAGTCACCTCCATCCCAGTaGAGAAGTGCACAGCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: YFLKTRSPMNFNHTGFGKSPPSQ*RSAQQT Trigger: TGTTTGCTGTGCACTTCTTCACTGGGATGGAGGTGA...CTTACCAAACCCAGTATGGTTAAAGTTCATTGGAGACCTTGTCTTAAGAAAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
||
| CDS-3UTR TCA 90 bp | TGCATGAAAAGACACAGGAAAGTACTATGTCCATTTATTTCTTGCTGCCTTATTAGAGTCTCCTGGTCATaGTGGAGGAGTAGTGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: CMKRHRKVLCPFISCCLIRVSWS*WRSSEE Trigger: CTCTTCACTACTCCTCCATCATGACCAGGAGACTCT...AATAAGGCAGCAAGAAATAAATGGACATAGTACTTTCCTGTGTCTTTTCATGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
||
| CDS-3UTR TCA 90 bp | CATACTGGGTTTGGTAAGAGCCCTTGTGCTCTACAGTATTTGACTTCACTAATATCAGAGAGAACAAGATaGCACTATAGGAGACAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: HTGFGKSPCALQYLTSLISERTR*HYRRQA Trigger: TGCTTGTCTCCTATAGTGTCATCTTGTTCTCTCTGA...TATTAGTGAAGTCAAATACTGTAGAGCACAAGGGCTCTTACCAAACCCAGTATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
||
| CDS-3UTR TCA 90 bp | ATGACCATTTCAGGGAATAATCAATACTCTTCTCTGGCTTGTGCTTTCACATGGTCAGAGAGAACAAGATaGCACTATAGGAGACAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: MTISGNNQYSSLACAFTWSERTR*HYRRQA Trigger: TGCTTGTCTCCTATAGTGTCATCTTGTTCTCTCTGA...CCATGTGAAAGCACAAGCCAGAGAAGAGTATTGATTATTCCCTGAAATGGTCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216445.2 |
||
| CDS-3UTR TCA 90 bp | GAGAAGATCATCCTGAGTGCATGGTATGTACTCACTTATAAGTGGATATTAGCCTCAGAGAGAACAAGATaGCACTATAGGAGACAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: EKIILSAWYVLTYKWILASERTR*HYRRQA Trigger: TGCTTGTCTCCTATAGTGTCATCTTGTTCTCTCTGA...GGCTAATATCCACTTATAAGTGAGTACATACCATGCACTCAGGATGATCTTCTC 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
||
| CDS-3UTR GCA 90 bp | GATCTTGAGAAGATCATCCTGAGTGCATGGTATGTACTCACTTATAAGTGGATACCACAGAAGGGCAGCTaGAAAGTGAAGATGATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: DLEKIILSAWYVLTYKWIPQKGS*KVKMIC Trigger: ACAAATCATCTTCACTTTGCAGCTGCCCTTCTGTGG...TATCCACTTATAAGTGAGTACATACCATGCACTCAGGATGATCTTCTCAAGATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
||
| CDS-3UTR GCA 90 bp | GAGAAGATCATCCTGAGTGCATGGTATGTACTCACTTATAAGTGGATATTAGCCGTTGCCCCCAATAGTTaGAAGGTAGATCAACAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: EKIILSAWYVLTYKWILAVAPNS*KVDQQK Trigger: TTTTTGTTGATCTACCTTGCAACTATTGGGGGCAAC...GGCTAATATCCACTTATAAGTGAGTACATACCATGCACTCAGGATGATCTTCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
||
| CDS-3UTR GCA 90 bp | CTTGAGAAGATCATCCTGAGTGCATGGTATGTACTCACTTATAAGTGGATATTAACAACATCACCAAAATaGCACAGAGTCTCCTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LEKIILSAWYVLTYKWILTTSPK*HRVSWS Trigger: TGACCAGGAGACTCTGTGGCATTTTGGTGATGTTGT...TAATATCCACTTATAAGTGAGTACATACCATGCACTCAGGATGATCTTCTCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
||
| CDS-3UTR GCA 90 bp | CATACTGGGTTTGGTAAGAGCCCTTGTGCTCTACAGTATTTGACTTCACTAATAATTTGTATGATAGAATaGAAGAAGCCTCCTGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: HTGFGKSPCALQYLTSLIICMIE*KKPPAQ Trigger: TTGGGCAGGAGGCTTCTTGCATTCTATCATACAAAT...TATTAGTGAAGTCAAATACTGTAGAGCACAAGGGCTCTTACCAAACCCAGTATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
||
| CDS-3UTR GCA 90 bp | GTCTATGTAATTCCTTCCATGGGTGTTTTGTTCCCAATTCTAAGAAGGGGCAAAATTTGTATGATAGAATaGAAGAAGCCTCCTGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: VYVIPSMGVLFPILRRGKICMIE*KKPPAQ Trigger: TTGGGCAGGAGGCTTCTTGCATTCTATCATACAAAT...TTTGCCCCTTCTTAGAATTGGGAACAAAACACCCATGGAAGGAATTACATAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000216445.2 |
||
| CDS-3UTR GCA 90 bp | GAGAAGATCATCCTGAGTGCATGGTATGTACTCACTTATAAGTGGATATTAGCCATTTGTATGATAGAATaGAAGAAGCCTCCTGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: EKIILSAWYVLTYKWILAICMIE*KKPPAQ Trigger: TTGGGCAGGAGGCTTCTTGCATTCTATCATACAAAT...GGCTAATATCCACTTATAAGTGAGTACATACCATGCACTCAGGATGATCTTCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
||
| CDS-3UTR GCA 90 bp | CTTGAGAAGATCATCCTGAGTGCATGGTATGTACTCACTTATAAGTGGATATTACCACAGAAGGGCAGCTaGAAAGTGAAGATGATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LEKIILSAWYVLTYKWILPQKGS*KVKMIC Trigger: ACAAATCATCTTCACTTTGCAGCTGCCCTTCTGTGG...TAATATCCACTTATAAGTGAGTACATACCATGCACTCAGGATGATCTTCTCAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
||
| CDS-3UTR TCA 90 bp | GAGAAGATCATCCTGAGTGCATGGTATGTACTCACTTATAAGTGGATATTAGCCTGGCAAACACTAAAATaGCAAATATGTGTGTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: EKIILSAWYVLTYKWILAWQTLK*QICVCQ Trigger: CTGACACACACATATTTGTCATTTTAGTGTTTGCCA...GGCTAATATCCACTTATAAGTGAGTACATACCATGCACTCAGGATGATCTTCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
||
| CDS-3UTR TCA 90 bp | CTTGAGAAGATCATCCTGAGTGCATGGTATGTACTCACTTATAAGTGGATATTATCAGAGAGAACAAGATaGCACTATAGGAGACAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LEKIILSAWYVLTYKWILSERTR*HYRRQA Trigger: TGCTTGTCTCCTATAGTGTCATCTTGTTCTCTCTGA...TAATATCCACTTATAAGTGAGTACATACCATGCACTCAGGATGATCTTCTCAAG 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
||
| CDS-3UTR GCA 90 bp | GATCTTGAGAAGATCATCCTGAGTGCATGGTATGTACTCACTTATAAGTGGATAGTTGCCCCCAATAGTTaGAAGGTAGATCAACAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: DLEKIILSAWYVLTYKWIVAPNS*KVDQQK Trigger: TTTTTGTTGATCTACCTTGCAACTATTGGGGGCAAC...TATCCACTTATAAGTGAGTACATACCATGCACTCAGGATGATCTTCTCAAGATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
||
| CDS-3UTR GCA 90 bp | TATTTTCTTAAGACAAGGTCTCCAATGAACTTTAACCATACTGGGTTTGGTAAGACAACATCACCAAAATaGCACAGAGTCTCCTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: YFLKTRSPMNFNHTGFGKTTSPK*HRVSWS Trigger: TGACCAGGAGACTCTGTGGCATTTTGGTGATGTTGT...CTTACCAAACCCAGTATGGTTAAAGTTCATTGGAGACCTTGTCTTAAGAAAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
||
| CDS-3UTR GCA 90 bp | GATCTTGAGAAGATCATCCTGAGTGCATGGTATGTACTCACTTATAAGTGGATAATTTGTATGATAGAATaGAAGAAGCCTCCTGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: DLEKIILSAWYVLTYKWIICMIE*KKPPAQ Trigger: TTGGGCAGGAGGCTTCTTGCATTCTATCATACAAAT...TATCCACTTATAAGTGAGTACATACCATGCACTCAGGATGATCTTCTCAAGATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
||
| CDS-3UTR GCA 90 bp | TATTTTCTTAAGACAAGGTCTCCAATGAACTTTAACCATACTGGGTTTGGTAAGCCACAGAAGGGCAGCTaGAAAGTGAAGATGATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: YFLKTRSPMNFNHTGFGKPQKGS*KVKMIC Trigger: ACAAATCATCTTCACTTTGCAGCTGCCCTTCTGTGG...CTTACCAAACCCAGTATGGTTAAAGTTCATTGGAGACCTTGTCTTAAGAAAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
||
| CDS-3UTR GCA 90 bp | TGCATGAAAAGACACAGGAAAGTACTATGTCCATTTATTTCTTGCTGCCTTATTCCACAGAAGGGCAGCTaGAAAGTGAAGATGATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: CMKRHRKVLCPFISCCLIPQKGS*KVKMIC Trigger: ACAAATCATCTTCACTTTGCAGCTGCCCTTCTGTGG...AATAAGGCAGCAAGAAATAAATGGACATAGTACTTTCCTGTGTCTTTTCATGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
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| CDS-3UTR TCA 90 bp | GATCTTGAGAAGATCATCCTGAGTGCATGGTATGTACTCACTTATAAGTGGATATGGCAAACACTAAAATaGCAAATATGTGTGTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: DLEKIILSAWYVLTYKWIWQTLK*QICVCQ Trigger: CTGACACACACATATTTGTCATTTTAGTGTTTGCCA...TATCCACTTATAAGTGAGTACATACCATGCACTCAGGATGATCTTCTCAAGATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
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| CDS-3UTR TCA 90 bp | TATTTTCTTAAGACAAGGTCTCCAATGAACTTTAACCATACTGGGTTTGGTAAGTCAGAGAGAACAAGATaGCACTATAGGAGACAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: YFLKTRSPMNFNHTGFGKSERTR*HYRRQA Trigger: TGCTTGTCTCCTATAGTGTCATCTTGTTCTCTCTGA...CTTACCAAACCCAGTATGGTTAAAGTTCATTGGAGACCTTGTCTTAAGAAAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
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| CDS-3UTR TCA 90 bp | TGCATGAAAAGACACAGGAAAGTACTATGTCCATTTATTTCTTGCTGCCTTATTTCAGAGAGAACAAGATaGCACTATAGGAGACAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CMKRHRKVLCPFISCCLISERTR*HYRRQA Trigger: TGCTTGTCTCCTATAGTGTCATCTTGTTCTCTCTGA...AATAAGGCAGCAAGAAATAAATGGACATAGTACTTTCCTGTGTCTTTTCATGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
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| CDS-3UTR GCA 90 bp | CTTGAGAAGATCATCCTGAGTGCATGGTATGTACTCACTTATAAGTGGATATTAGTTGCCCCCAATAGTTaGAAGGTAGATCAACAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LEKIILSAWYVLTYKWILVAPNS*KVDQQK Trigger: TTTTTGTTGATCTACCTTGCAACTATTGGGGGCAAC...TAATATCCACTTATAAGTGAGTACATACCATGCACTCAGGATGATCTTCTCAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
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| CDS-3UTR GCA 90 bp | CTTGAGAAGATCATCCTGAGTGCATGGTATGTACTCACTTATAAGTGGATATTAATTTGTATGATAGAATaGAAGAAGCCTCCTGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LEKIILSAWYVLTYKWILICMIE*KKPPAQ Trigger: TTGGGCAGGAGGCTTCTTGCATTCTATCATACAAAT...TAATATCCACTTATAAGTGAGTACATACCATGCACTCAGGATGATCTTCTCAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
||
| CDS-3UTR TCA 90 bp | CTTGAGAAGATCATCCTGAGTGCATGGTATGTACTCACTTATAAGTGGATATTATGGCAAACACTAAAATaGCAAATATGTGTGTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LEKIILSAWYVLTYKWILWQTLK*QICVCQ Trigger: CTGACACACACATATTTGTCATTTTAGTGTTTGCCA...TAATATCCACTTATAAGTGAGTACATACCATGCACTCAGGATGATCTTCTCAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
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| CDS-3UTR GCA 90 bp | TATTTTCTTAAGACAAGGTCTCCAATGAACTTTAACCATACTGGGTTTGGTAAGGTTGCCCCCAATAGTTaGAAGGTAGATCAACAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: YFLKTRSPMNFNHTGFGKVAPNS*KVDQQK Trigger: TTTTTGTTGATCTACCTTGCAACTATTGGGGGCAAC...CTTACCAAACCCAGTATGGTTAAAGTTCATTGGAGACCTTGTCTTAAGAAAATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
||
| CDS-3UTR GCA 90 bp | TATTTTCTTAAGACAAGGTCTCCAATGAACTTTAACCATACTGGGTTTGGTAAGATTTGTATGATAGAATaGAAGAAGCCTCCTGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: YFLKTRSPMNFNHTGFGKICMIE*KKPPAQ Trigger: TTGGGCAGGAGGCTTCTTGCATTCTATCATACAAAT...CTTACCAAACCCAGTATGGTTAAAGTTCATTGGAGACCTTGTCTTAAGAAAATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
||
| CDS-3UTR TCA 90 bp | TATTTTCTTAAGACAAGGTCTCCAATGAACTTTAACCATACTGGGTTTGGTAAGTGGCAAACACTAAAATaGCAAATATGTGTGTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: YFLKTRSPMNFNHTGFGKWQTLK*QICVCQ Trigger: CTGACACACACATATTTGTCATTTTAGTGTTTGCCA...CTTACCAAACCCAGTATGGTTAAAGTTCATTGGAGACCTTGTCTTAAGAAAATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
||
| CDS-3UTR CAA 90 bp | GATTATGGGATGAATCCCCGGGCCTGGCAGTCTCTAGATGGTCCATCCTTTCGTCAGATAGACCCACTGTaGGCAAACACTAAAATGACA | + |
|
Preference number: 5 (lower is better) Translates to: DYGMNPRAWQSLDGPSFRQIDPL*ANTKMT Trigger: TGTCATTTTAGTGTTTGCCAACAGTGGGTCTATCTG...ACGAAAGGATGGACCATCTAGAGACTGCCAGGCCCGGGGATTCATCCCATAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216445.2 |
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| CDS GCA 90 bp | CCACAGAAGGGCAGCTGCAAAGTGAAGATGATTTGTATGATAGAATaGAAGAAGCCTCCTGCCCAAGACAACATCACCAAAATGCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: PQKGSCKVKMICMIE*KKPPAQDNITKMPQ Trigger: CTGTGGCATTTTGGTGATGTTGTCTTGGGCAGGAGGCTTCTTGCATTCTATCATACAAATCATCTTCACTTTGCAGCTGCCCTTCTGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000099790.2 ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000216445.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
||
| CDS-3UTR CAA 90 bp | GGGTGTTTTGTTCCCAATTCTAAGAAGGGGCAAAGTGTCCACACTTTGGTCTTCGTGCACAGCAAACAGTaGTGTCATGCAGCATTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: GCFVPNSKKGQSVHTLVFVHSKQ*CHAAFK Trigger: TTTGAATGCTGCATGACACAACTGTTTGCTGTGCAC...GAAGACCAAAGTGTGGACACTTTGCCCCTTCTTAGAATTGGGAACAAAACACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216445.2 |
||
| CDS GCA 90 bp | CTGCAAAGTGAAGATGATTTGTATGATAGAATGCAAGAAGCCTCCTaGCCAAGACAACATCACCAAAATGCCACAGAGTCTCCTGGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: LQSEDDLYDRMQEAS*PRQHHQNATESPGH Trigger: ATGACCAGGAGACTCTGTGGCATTTTGGTGATGTTGTCTTGGGCAGGAGGCTTCTTGCATTCTATCATACAAATCATCTTCACTTTGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000099790.2 ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000216445.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
||
| CDS-3UTR CAA 90 bp | GTCTATGTAATTCCTTCCATGGGTGTTTTGTTCCCAATTCTAAGAAGGGGCAAATTAAGAAGAAGTACATaGGGGAGCCCAGCAGTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: VYVIPSMGVLFPILRRGKLRRST*GSPAVQ Trigger: CTGCACTGCTGGGCTCCCCAATGTACTTCTTCTTAA...TTTGCCCCTTCTTAGAATTGGGAACAAAACACCCATGGAAGGAATTACATAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000216445.2 |
||
| CDS-3UTR CAA 90 bp | CATACTGGGTTTGGTAAGAGCCCTTGTGCTCTACAGTATTTGACTTCACTAATATTAAGAAGAAGTACATaGGGGAGCCCAGCAGTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: HTGFGKSPCALQYLTSLILRRST*GSPAVQ Trigger: CTGCACTGCTGGGCTCCCCAATGTACTTCTTCTTAA...TATTAGTGAAGTCAAATACTGTAGAGCACAAGGGCTCTTACCAAACCCAGTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
||
| CDS-3UTR CAA 90 bp | CCATCCTTTCGTCTCAGCTCCAAACTTTGTCTATGTAATTCCTTCCATGGGTGTAAGTCTACAATCATCTaGGGGGTGACAGTGGAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: PSFRLSSKLCLCNSFHGCKSTII*GVTVEE Trigger: TTCTTCCACTGTCACCCCCAAGATGATTGTAGACTT...ACACCCATGGAAGGAATTACATAGACAAAGTTTGGAGCTGAGACGAAAGGATGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216445.2 |
||
| CDS-3UTR CAA 90 bp | GATCTTGAGAAGATCATCCTGAGTGCATGGTATGTACTCACTTATAAGTGGATATTAAGAAGAAGTACATaGGGGAGCCCAGCAGTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: DLEKIILSAWYVLTYKWILRRST*GSPAVQ Trigger: CTGCACTGCTGGGCTCCCCAATGTACTTCTTCTTAA...TATCCACTTATAAGTGAGTACATACCATGCACTCAGGATGATCTTCTCAAGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
||
| CDS-3UTR CAA 90 bp | CATACTGGGTTTGGTAAGAGCCCTTGTGCTCTACAGTATTTGACTTCACTAATAAAGTCTACAATCATCTaGGGGGTGACAGTGGAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: HTGFGKSPCALQYLTSLIKSTII*GVTVEE Trigger: TTCTTCCACTGTCACCCCCAAGATGATTGTAGACTT...TATTAGTGAAGTCAAATACTGTAGAGCACAAGGGCTCTTACCAAACCCAGTATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
||
| CDS-3UTR CAA 90 bp | CATACTGGGTTTGGTAAGAGCCCTTGTGCTCTACAGTATTTGACTTCACTAATAGTGCACAGCAAACAGTaGTGTCATGCAGCATTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: HTGFGKSPCALQYLTSLIVHSKQ*CHAAFK Trigger: TTTGAATGCTGCATGACACAACTGTTTGCTGTGCAC...TATTAGTGAAGTCAAATACTGTAGAGCACAAGGGCTCTTACCAAACCCAGTATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
||
| CDS-3UTR CAA 90 bp | GAGAAGATCATCCTGAGTGCATGGTATGTACTCACTTATAAGTGGATATTAGCCGTGCACAGCAAACAGTaGTGTCATGCAGCATTCAAA | + |
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Preference number: 5 (lower is better) Translates to: EKIILSAWYVLTYKWILAVHSKQ*CHAAFK Trigger: TTTGAATGCTGCATGACACAACTGTTTGCTGTGCAC...GGCTAATATCCACTTATAAGTGAGTACATACCATGCACTCAGGATGATCTTCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
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| CDS-3UTR CAA 90 bp | TATTTTCTTAAGACAAGGTCTCCAATGAACTTTAACCATACTGGGTTTGGTAAGTTAAGAAGAAGTACATaGGGGAGCCCAGCAGTGCAG | + |
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Preference number: 5 (lower is better) Translates to: YFLKTRSPMNFNHTGFGKLRRST*GSPAVQ Trigger: CTGCACTGCTGGGCTCCCCAATGTACTTCTTCTTAA...CTTACCAAACCCAGTATGGTTAAAGTTCATTGGAGACCTTGTCTTAAGAAAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
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| CDS-3UTR CAA 90 bp | GATCTTGAGAAGATCATCCTGAGTGCATGGTATGTACTCACTTATAAGTGGATAGTGCACAGCAAACAGTaGTGTCATGCAGCATTCAAA | + |
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Preference number: 5 (lower is better) Translates to: DLEKIILSAWYVLTYKWIVHSKQ*CHAAFK Trigger: TTTGAATGCTGCATGACACAACTGTTTGCTGTGCAC...TATCCACTTATAAGTGAGTACATACCATGCACTCAGGATGATCTTCTCAAGATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
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| CDS-3UTR CAA 90 bp | GAGAAGATCATCCTGAGTGCATGGTATGTACTCACTTATAAGTGGATATTAGCCCAGATAGACCCACTGTaGGCAAACACTAAAATGACA | + |
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Preference number: 5 (lower is better) Translates to: EKIILSAWYVLTYKWILAQIDPL*ANTKMT Trigger: TGTCATTTTAGTGTTTGCCAACAGTGGGTCTATCTG...GGCTAATATCCACTTATAAGTGAGTACATACCATGCACTCAGGATGATCTTCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
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| CDS-3UTR CAA 90 bp | CATACTGGGTTTGGTAAGAGCCCTTGTGCTCTACAGTATTTGACTTCACTAATACAGATAGACCCACTGTaGGCAAACACTAAAATGACA | + |
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Preference number: 5 (lower is better) Translates to: HTGFGKSPCALQYLTSLIQIDPL*ANTKMT Trigger: TGTCATTTTAGTGTTTGCCAACAGTGGGTCTATCTG...TATTAGTGAAGTCAAATACTGTAGAGCACAAGGGCTCTTACCAAACCCAGTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
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| CDS-3UTR CAA 90 bp | CTTGAGAAGATCATCCTGAGTGCATGGTATGTACTCACTTATAAGTGGATATTAAAGTCTACAATCATCTaGGGGGTGACAGTGGAAGAA | + |
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Preference number: 5 (lower is better) Translates to: LEKIILSAWYVLTYKWILKSTII*GVTVEE Trigger: TTCTTCCACTGTCACCCCCAAGATGATTGTAGACTT...TAATATCCACTTATAAGTGAGTACATACCATGCACTCAGGATGATCTTCTCAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
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| CDS-3UTR CAA 90 bp | CTTGAGAAGATCATCCTGAGTGCATGGTATGTACTCACTTATAAGTGGATATTAGTGCACAGCAAACAGTaGTGTCATGCAGCATTCAAA | + |
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Preference number: 5 (lower is better) Translates to: LEKIILSAWYVLTYKWILVHSKQ*CHAAFK Trigger: TTTGAATGCTGCATGACACAACTGTTTGCTGTGCAC...TAATATCCACTTATAAGTGAGTACATACCATGCACTCAGGATGATCTTCTCAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
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| CDS-3UTR CAA 90 bp | CATACTGGGTTTGGTAAGAGCCCTTGTGCTCTACAGTATTTGACTTCACTAATAGTACTTTCTCAACTTTaGAGTTCTGTGAAAGTCCAA | + |
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Preference number: 5 (lower is better) Translates to: HTGFGKSPCALQYLTSLIVLSQL*SSVKVQ Trigger: TTGGACTTTCACAGAACTCAAAAGTTGAGAAAGTAC...TATTAGTGAAGTCAAATACTGTAGAGCACAAGGGCTCTTACCAAACCCAGTATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
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| CDS-3UTR CAA 90 bp | GAGAAGATCATCCTGAGTGCATGGTATGTACTCACTTATAAGTGGATATTAGCCGTACTTTCTCAACTTTaGAGTTCTGTGAAAGTCCAA | + |
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Preference number: 5 (lower is better) Translates to: EKIILSAWYVLTYKWILAVLSQL*SSVKVQ Trigger: TTGGACTTTCACAGAACTCAAAAGTTGAGAAAGTAC...GGCTAATATCCACTTATAAGTGAGTACATACCATGCACTCAGGATGATCTTCTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
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| CDS-3UTR CAA 90 bp | TGCATGAAAAGACACAGGAAAGTACTATGTCCATTTATTTCTTGCTGCCTTATTAAGTCTACAATCATCTaGGGGGTGACAGTGGAAGAA | + |
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Preference number: 5 (lower is better) Translates to: CMKRHRKVLCPFISCCLIKSTII*GVTVEE Trigger: TTCTTCCACTGTCACCCCCAAGATGATTGTAGACTT...AATAAGGCAGCAAGAAATAAATGGACATAGTACTTTCCTGTGTCTTTTCATGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
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| CDS-3UTR CAA 90 bp | TATTTTCTTAAGACAAGGTCTCCAATGAACTTTAACCATACTGGGTTTGGTAAGAAGTCTACAATCATCTaGGGGGTGACAGTGGAAGAA | + |
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Preference number: 5 (lower is better) Translates to: YFLKTRSPMNFNHTGFGKKSTII*GVTVEE Trigger: TTCTTCCACTGTCACCCCCAAGATGATTGTAGACTT...CTTACCAAACCCAGTATGGTTAAAGTTCATTGGAGACCTTGTCTTAAGAAAATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
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| CDS-3UTR CAA 90 bp | CTTGAGAAGATCATCCTGAGTGCATGGTATGTACTCACTTATAAGTGGATATTACAGATAGACCCACTGTaGGCAAACACTAAAATGACA | + |
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Preference number: 5 (lower is better) Translates to: LEKIILSAWYVLTYKWILQIDPL*ANTKMT Trigger: TGTCATTTTAGTGTTTGCCAACAGTGGGTCTATCTG...TAATATCCACTTATAAGTGAGTACATACCATGCACTCAGGATGATCTTCTCAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
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| CDS-3UTR CAA 90 bp | GATCTTGAGAAGATCATCCTGAGTGCATGGTATGTACTCACTTATAAGTGGATAGTACTTTCTCAACTTTaGAGTTCTGTGAAAGTCCAA | + |
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Preference number: 5 (lower is better) Translates to: DLEKIILSAWYVLTYKWIVLSQL*SSVKVQ Trigger: TTGGACTTTCACAGAACTCAAAAGTTGAGAAAGTAC...TATCCACTTATAAGTGAGTACATACCATGCACTCAGGATGATCTTCTCAAGATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
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| CDS-3UTR CAA 90 bp | TGCATGAAAAGACACAGGAAAGTACTATGTCCATTTATTTCTTGCTGCCTTATTCAGATAGACCCACTGTaGGCAAACACTAAAATGACA | + |
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Preference number: 5 (lower is better) Translates to: CMKRHRKVLCPFISCCLIQIDPL*ANTKMT Trigger: TGTCATTTTAGTGTTTGCCAACAGTGGGTCTATCTG...AATAAGGCAGCAAGAAATAAATGGACATAGTACTTTCCTGTGTCTTTTCATGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
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| CDS-3UTR CAA 90 bp | TCTATTACCTTCTGTCCACAATTCTTCCTTCTATTCTTTCATAGGAGTCTCCAAGTACTTTCTCAACTTTaGAGTTCTGTGAAAGTCCAA | + |
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Preference number: 5 (lower is better) Translates to: SITFCPQFFLLFFHRSLQVLSQL*SSVKVQ Trigger: TTGGACTTTCACAGAACTCAAAAGTTGAGAAAGTAC...TTGGAGACTCCTATGAAAGAATAGAAGGAAGAATTGTGGACAGAAGGTAATAGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216445.2 |
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| CDS-3UTR CAA 90 bp | CTTGAGAAGATCATCCTGAGTGCATGGTATGTACTCACTTATAAGTGGATATTAGTACTTTCTCAACTTTaGAGTTCTGTGAAAGTCCAA | + |
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Preference number: 5 (lower is better) Translates to: LEKIILSAWYVLTYKWILVLSQL*SSVKVQ Trigger: TTGGACTTTCACAGAACTCAAAAGTTGAGAAAGTAC...TAATATCCACTTATAAGTGAGTACATACCATGCACTCAGGATGATCTTCTCAAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
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| CDS CAA 72 bp | GGGTCCACAGAAGGGCAGCTGCAAAGTGAAGATGATTaGTATGATAGAATGCAAGAAGCCTCCTGCCCAAGA | + |
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Preference number: 6 (lower is better) Translates to: GSTEGQLQSEDD*YDRMQEASCPR Trigger: TCTTGGGCAGGAGGCTTCTTGCATTCTATCATACAAATCATCTTCACTTTGCAGCTGCCCTTCTGTGGACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000099790.2 ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000216445.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
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| CDS GCA 72 bp | GAAGATGATTTGTATGATAGAATGCAAGAAGCCTCCTaGCCAAGACAACATCACCAAAATGCCACAGAGTCT | + |
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Preference number: 6 (lower is better) Translates to: EDDLYDRMQEAS*PRQHHQNATES Trigger: AGACTCTGTGGCATTTTGGTGATGTTGTCTTGGGCAGGAGGCTTCTTGCATTCTATCATACAAATCATCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000099790.2 ENSMUST00000214709.2 ENSMUST00000215562.2 ENSMUST00000215987.2 ENSMUST00000216445.2 ENSMUST00000217601.2 ENSMUST00000220416.2 |
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