Pregenerated sensors for OLFR1221 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075102Ensembl transcript IDs: ENSMUST00000099795.2, ENSMUST00000143255.3, ENSMUST00000213404.2, ENSMUST00000217635.2
Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGCCTTCCTGTACTTCAGCCATGAACCAGACTAGGACTCTCACCTaGGTGGGAACCTCTCTCTCTCTCTGCCCTCTCCCCTGTAACTCT | + |
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Preference number: 1 (lower is better) Translates to: RPSCTSAMNQTRTLT*VGTSLSLCPLPCNS Trigger: AGAGTTACAGGGGAGAGGGCAGAGAGAGAGAGAGGTTCCCACGCAGGTGAGAGTCCTAGTCTGGTTCATGGCTGAAGTACAGGAAGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000143255.3 ENSMUST00000213404.2 ENSMUST00000217635.2 |
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| 3UTR TCA 90 bp | GCCATTTATAATCTCCCATCAAAAGGCCTTCCTGTACTTCAGCCATaGACCAGACTAGGACTCTCACCTGCGTGGGAACCTCTCTCTCTC | + |
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Preference number: 1 (lower is better) Translates to: AIYNLPSKGLPVLQP*TRLGLSPAWEPLSL Trigger: GAGAGAGAGAGGTTCCCACGCAGGTGAGAGTCCTAGTCTGGTTCATGGCTGAAGTACAGGAAGGCCTTTTGATGGGAGATTATAAATGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000143255.3 ENSMUST00000213404.2 ENSMUST00000217635.2 |
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| 3UTR CCA 90 bp | TCAAGGTTGAGTTCTCACAGTATCTCTCAGAAAAAGATTTCCTCTTaGGACAGTTTTGTGTGTTTCTTTCCTAATTTCAGGTACACAAAT | + |
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Preference number: 1 (lower is better) Translates to: SRLSSHSISQKKISS*DSFVCFFPNFRYTN Trigger: ATTTGTGTACCTGAAATTAGGAAAGAAACACACAAAACTGTCCCAAGAGGAAATCTTTTTCTGAGAGATACTGTGAGAACTCAACCTTGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217635.2 |
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| 3UTR-3UTR GCA 90 bp | TACAGCCAGATGCCCACCTGCGGCAGAGTAGAAAGCATCTGGCAGTCCTCCCACCCAGGTCCTCTTGGCTaGACACCAAACATACTTACT | + |
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Preference number: 2 (lower is better) Translates to: YSQMPTCGRVESIWQSSHPGPLG*TPNILT Trigger: AGTAAGTATGTTTGGTGTGCAGCCAAGAGGACCTGG...GTGGGAGGACTGCCAGATGCTTTCTACTCTGCCGCAGGTGGGCATCTGGCTGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000143255.3 ENSMUST00000213404.2 ENSMUST00000217635.2 |
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| 3UTR-3UTR TCA 90 bp | CCCTGTAGAGTGGGGTCCAGTGGCTTCATACAGCCAGATGCCCACCTGCGGCAGACCAAACATACTTACTaGTTGATCTCTCCAGAACTG | + |
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Preference number: 2 (lower is better) Translates to: PCRVGSSGFIQPDAHLRQTKHTY*LISPEL Trigger: CAGTTCTGGAGAGATCAATCAGTAAGTATGTTTGGT...CTGCCGCAGGTGGGCATCTGGCTGTATGAAGCCACTGGACCCCACTCTACAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000143255.3 ENSMUST00000213404.2 ENSMUST00000217635.2 |
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| 3UTR-3UTR CCA 90 bp | GCTCTTTTGGAGGTCCTGAGCTCAAATCCCAGCAACCACATGGTGGCTCATAACATAAGAGGGGCTGCTTaGCCCCTCCTCACTCTCTTA | + |
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Preference number: 2 (lower is better) Translates to: ALLEVLSSNPSNHMVAHNIRGAA*PLLTLL Trigger: TAAGAGAGTGAGGAGGGGCCAAGCAGCCCCTCTTAT...GTTATGAGCCACCATGTGGTTGCTGGGATTTGAGCTCAGGACCTCCAAAAGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000217635.2 |
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| 3UTR-3UTR TCA 90 bp | TACAGCCAGATGCCCACCTGCGGCAGAGTAGAAAGCATCTGGCAGTCCTCCCACACCAAACATACTTACTaGTTGATCTCTCCAGAACTG | + |
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Preference number: 2 (lower is better) Translates to: YSQMPTCGRVESIWQSSHTKHTY*LISPEL Trigger: CAGTTCTGGAGAGATCAATCAGTAAGTATGTTTGGT...GTGGGAGGACTGCCAGATGCTTTCTACTCTGCCGCAGGTGGGCATCTGGCTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000143255.3 ENSMUST00000213404.2 ENSMUST00000217635.2 |
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| 3UTR-3UTR GCA 90 bp | CCCTGTAGAGTGGGGTCCAGTGGCTTCATACAGCCAGATGCCCACCTGCGGCAGCCACTGTTCTCTATTTaGTTTTTGAGTCAAAGACTA | + |
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Preference number: 2 (lower is better) Translates to: PCRVGSSGFIQPDAHLRQPLFSI*FLSQRL Trigger: TAGTCTTTGACTCAAAAAGCAAATAGAGAACAGTGG...CTGCCGCAGGTGGGCATCTGGCTGTATGAAGCCACTGGACCCCACTCTACAGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000143255.3 ENSMUST00000213404.2 ENSMUST00000217635.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGACCCCACAGGAGAAGCTGTGGCTAGTAGTCACATACACTATGTCCCAAGCCCAGGTCCTCTTGGCTaGACACCAAACATACTTACT | + |
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Preference number: 2 (lower is better) Translates to: TDPTGEAVASSHIHYVPSPGPLG*TPNILT Trigger: AGTAAGTATGTTTGGTGTGCAGCCAAGAGGACCTGG...GCTTGGGACATAGTGTATGTGACTACTAGCCACAGCTTCTCCTGTGGGGTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000143255.3 ENSMUST00000213404.2 ENSMUST00000217635.2 |
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| 3UTR-3UTR CCA 90 bp | GCCCCTCCTCACTCTCTTACTCTCTCACTCTTTGCTCTCTTAAGCTTTTACTTTCCACCCCCTGTAGAGTaGGGTCCAGTGGCTTCATAC | + |
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Preference number: 2 (lower is better) Translates to: APPHSLTLSLFALLSFYFPPPVE*GPVASY Trigger: GTATGAAGCCACTGGACCCCACTCTACAGGGGGTGG...AAAGTAAAAGCTTAAGAGAGCAAAGAGTGAGAGAGTAAGAGAGTGAGGAGGGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000143255.3 ENSMUST00000213404.2 ENSMUST00000217635.2 |
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| 3UTR-3UTR TCA 90 bp | GCCCCTCCTCACTCTCTTACTCTCTCACTCTTTGCTCTCTTAAGCTTTTACTTTCATGTGTACTTTCACTaGGCCCAGGTCCTCTTGGCT | + |
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Preference number: 2 (lower is better) Translates to: APPHSLTLSLFALLSFYFHVYFH*AQVLLA Trigger: AGCCAAGAGGACCTGGGCTCAGTGAAAGTACACATG...AAAGTAAAAGCTTAAGAGAGCAAAGAGTGAGAGAGTAAGAGAGTGAGGAGGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000143255.3 ENSMUST00000213404.2 ENSMUST00000217635.2 |
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| 3UTR-3UTR CCA 90 bp | GCCCCTCCTCACTCTCTTACTCTCTCACTCTTTGCTCTCTTAAGCTTTTACTTTAGAGTAGAAAGCATCTaGCAGTCCTCCCACACCCAC | + |
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Preference number: 2 (lower is better) Translates to: APPHSLTLSLFALLSFYFRVESI*QSSHTH Trigger: GTGGGTGTGGGAGGACTGCCAGATGCTTTCTACTCT...AAAGTAAAAGCTTAAGAGAGCAAAGAGTGAGAGAGTAAGAGAGTGAGGAGGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000143255.3 ENSMUST00000213404.2 ENSMUST00000217635.2 |
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| 3UTR-3UTR TCA 90 bp | ACAGACCCCACAGGAGAAGCTGTGGCTAGTAGTCACATACACTATGTCCCAAGCACCAAACATACTTACTaGTTGATCTCTCCAGAACTG | + |
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Preference number: 2 (lower is better) Translates to: TDPTGEAVASSHIHYVPSTKHTY*LISPEL Trigger: CAGTTCTGGAGAGATCAATCAGTAAGTATGTTTGGT...GCTTGGGACATAGTGTATGTGACTACTAGCCACAGCTTCTCCTGTGGGGTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000143255.3 ENSMUST00000213404.2 ENSMUST00000217635.2 |
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| 3UTR-3UTR GCA 90 bp | GCCCCTCCTCACTCTCTTACTCTCTCACTCTTTGCTCTCTTAAGCTTTTACTTTCATCAAGGCCCACTGTaGTTTCCTCTAATGAGCCAT | + |
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Preference number: 2 (lower is better) Translates to: APPHSLTLSLFALLSFYFHQGPL*FPLMSH Trigger: ATGGCTCATTAGAGGAAAGCACAGTGGGCCTTGATG...AAAGTAAAAGCTTAAGAGAGCAAAGAGTGAGAGAGTAAGAGAGTGAGGAGGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000143255.3 ENSMUST00000213404.2 ENSMUST00000217635.2 |
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| 3UTR-3UTR GCA 90 bp | GCTCTTTTGGAGGTCCTGAGCTCAAATCCCAGCAACCACATGGTGGCTCATAACTTTTGCTGTGTTCTCTaGATTTCAAGGTTGAGTTCT | + |
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Preference number: 2 (lower is better) Translates to: ALLEVLSSNPSNHMVAHNFCCVL*ISRLSS Trigger: AGAACTCAACCTTGAAATGCAGAGAACACAGCAAAA...GTTATGAGCCACCATGTGGTTGCTGGGATTTGAGCTCAGGACCTCCAAAAGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217635.2 |
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| 3UTR-3UTR GCA 90 bp | GGGGCTGGTGAAATGACTCAACAGATAAGAGACTGCTCTTTTGGAGGTCCTGAGGAAGACAGGGTGCCTTaGAGATATTTCTATTTGGAA | + |
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Preference number: 2 (lower is better) Translates to: GAGEMTQQIRDCSFGGPEEDRVP*RYFYLE Trigger: TTCCAAATAGAAATATCTGCAAGGCACCCTGTCTTC...CTCAGGACCTCCAAAAGAGCAGTCTCTTATCTGTTGAGTCATTTCACCAGCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217635.2 |
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| 3UTR-3UTR CCA 90 bp | CTCTGTTTTTGCTGTGTTCTCTGCATTTCAAGGTTGAGTTCTCACAGTATCTCTCTCTCCTCTTGGGCATaGCTGGTCTCTCTCTCTTTC | + |
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Preference number: 2 (lower is better) Translates to: LCFCCVLCISRLSSHSISLSSWA*LVSLSF Trigger: GAAAGAGAGAGAGACCAGCCATGCCCAAGAGGAGAG...AGAGATACTGTGAGAACTCAACCTTGAAATGCAGAGAACACAGCAAAAACAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217635.2 |
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| 3UTR-3UTR GCA 90 bp | TCATGCCTCTGTTTTTGCTGTGTTCTCTGCATTTCAAGGTTGAGTTCTCACAGTCCAGGTCCTCTTGGCTaGACACCAAACATACTTACT | + |
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Preference number: 2 (lower is better) Translates to: SCLCFCCVLCISRLSSHSPGPLG*TPNILT Trigger: AGTAAGTATGTTTGGTGTGCAGCCAAGAGGACCTGG...ACTGTGAGAACTCAACCTTGAAATGCAGAGAACACAGCAAAAACAGAGGCATGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217635.2 |
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| 3UTR-3UTR CCA 90 bp | CATTTTTGTCTCTTTGCACACAGAGGCTGTTGGGTTTATGTATACATGTTTTTACCACCCCCTGTAGAGTaGGGTCCAGTGGCTTCATAC | + |
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Preference number: 2 (lower is better) Translates to: HFCLFAHRGCWVYVYMFLPPPVE*GPVASY Trigger: GTATGAAGCCACTGGACCCCACTCTACAGGGGGTGG...TAAAAACATGTATACATAAACCCAACAGCCTCTGTGTGCAAAGAGACAAAAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000143255.3 ENSMUST00000213404.2 ENSMUST00000217635.2 |
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| 3UTR-3UTR TCA 90 bp | TCTCTTTGCACACAGAGGCTGTTGGGTTTATGTATACATGTTTTTACACATGATCATGTGTACTTTCACTaGGCCCAGGTCCTCTTGGCT | + |
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Preference number: 2 (lower is better) Translates to: SLCTQRLLGLCIHVFTHDHVYFH*AQVLLA Trigger: AGCCAAGAGGACCTGGGCTCAGTGAAAGTACACATG...ATCATGTGTAAAAACATGTATACATAAACCCAACAGCCTCTGTGTGCAAAGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000143255.3 ENSMUST00000213404.2 ENSMUST00000217635.2 |
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| 3UTR-3UTR GCA 90 bp | CATTTTTGTCTCTTTGCACACAGAGGCTGTTGGGTTTATGTATACATGTTTTTATGGGGCAGTGGGCTATaGACAGACAGTCTGGTCTCT | + |
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Preference number: 2 (lower is better) Translates to: HFCLFAHRGCWVYVYMFLWGSGL*TDSLVS Trigger: AGAGACCAGACTGTCTGTGCATAGCCCACTGCCCCA...TAAAAACATGTATACATAAACCCAACAGCCTCTGTGTGCAAAGAGACAAAAATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000143255.3 ENSMUST00000213404.2 ENSMUST00000217635.2 |
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| 3UTR-3UTR CCA 90 bp | CATTTTTGTCTCTTTGCACACAGAGGCTGTTGGGTTTATGTATACATGTTTTTAAGCCCTCATGTCTCCTaGATCCCTGGCTCCTGTCAA | + |
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Preference number: 2 (lower is better) Translates to: HFCLFAHRGCWVYVYMFLSPHVS*IPGSCQ Trigger: TTGACAGGAGCCAGGGATCCAGGAGACATGAGGGCT...TAAAAACATGTATACATAAACCCAACAGCCTCTGTGTGCAAAGAGACAAAAATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000143255.3 ENSMUST00000213404.2 ENSMUST00000217635.2 |
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| 3UTR-3UTR CCA 90 bp | CATTTTTGTCTCTTTGCACACAGAGGCTGTTGGGTTTATGTATACATGTTTTTAGAGCCCAGGTCCTCTTaGCTGCACACCAAACATACT | + |
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Preference number: 2 (lower is better) Translates to: HFCLFAHRGCWVYVYMFLEPRSS*LHTKHT Trigger: AGTATGTTTGGTGTGCAGCCAAGAGGACCTGGGCTC...TAAAAACATGTATACATAAACCCAACAGCCTCTGTGTGCAAAGAGACAAAAATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000143255.3 ENSMUST00000213404.2 ENSMUST00000217635.2 |
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| 3UTR-3UTR CCA 90 bp | CATTTTTGTCTCTTTGCACACAGAGGCTGTTGGGTTTATGTATACATGTTTTTACCTCTTGGGCATGGCTaGTCTCTCTCTCTTTCTACC | + |
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Preference number: 2 (lower is better) Translates to: HFCLFAHRGCWVYVYMFLPLGHG*SLSLST Trigger: GGTAGAAAGAGAGAGAGACCAGCCATGCCCAAGAGG...TAAAAACATGTATACATAAACCCAACAGCCTCTGTGTGCAAAGAGACAAAAATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000143255.3 ENSMUST00000213404.2 ENSMUST00000217635.2 |
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| 3UTR CAA 90 bp | CTAAATTCATGCCTCTGTTTTTGCTGTGTTCTCTGCATTTCAAGGTaGAGTTCTCACAGTATCTCTCAGAAAAAGATTTCCTCTTGGGAC | + |
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Preference number: 2 (lower is better) Translates to: LNSCLCFCCVLCISR*SSHSISQKKISSWD Trigger: GTCCCAAGAGGAAATCTTTTTCTGAGAGATACTGTGAGAACTCAACCTTGAAATGCAGAGAACACAGCAAAAACAGAGGCATGAATTTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000217635.2 |
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| 3UTR-3UTR CCA 90 bp | CATTTTTGTCTCTTTGCACACAGAGGCTGTTGGGTTTATGTATACATGTTTTTACCACAGGAGAAGCTGTaGCTAGTAGTCACATACACT | + |
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Preference number: 2 (lower is better) Translates to: HFCLFAHRGCWVYVYMFLPQEKL*LVVTYT Trigger: AGTGTATGTGACTACTAGCCACAGCTTCTCCTGTGG...TAAAAACATGTATACATAAACCCAACAGCCTCTGTGTGCAAAGAGACAAAAATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000143255.3 ENSMUST00000213404.2 ENSMUST00000217635.2 |
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| 3UTR-3UTR GCA 90 bp | CATTTTTGTCTCTTTGCACACAGAGGCTGTTGGGTTTATGTATACATGTTTTTACCACTGTTCTCTATTTaGTTTTTGAGTCAAAGACTA | + |
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Preference number: 2 (lower is better) Translates to: HFCLFAHRGCWVYVYMFLPLFSI*FLSQRL Trigger: TAGTCTTTGACTCAAAAAGCAAATAGAGAACAGTGG...TAAAAACATGTATACATAAACCCAACAGCCTCTGTGTGCAAAGAGACAAAAATG 34% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000143255.3 ENSMUST00000213404.2 ENSMUST00000217635.2 |
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| 3UTR CCA 72 bp | GTATTGAGGGCTGCCCCTTGTCCACCCCCTGTAGAGTaGGGTCCAGTGGCTTCATACAGCCAGATGCCCACC | + |
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Preference number: 3 (lower is better) Translates to: VLRAAPCPPPVE*GPVASYSQMPT Trigger: GGTGGGCATCTGGCTGTATGAAGCCACTGGACCCCACTCTACAGGGGGTGGACAAGGGGCAGCCCTCAATAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000143255.3 ENSMUST00000213404.2 ENSMUST00000217635.2 |
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| 3UTR GCA 72 bp | TGGGGTCCAGTGGCTTCATACAGCCAGATGCCCACCTaGGGCAGAGTAGAAAGCATCTGGCAGTCCTCCCAC | + |
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Preference number: 3 (lower is better) Translates to: WGPVASYSQMPT*GRVESIWQSSH Trigger: GTGGGAGGACTGCCAGATGCTTTCTACTCTGCCGCAGGTGGGCATCTGGCTGTATGAAGCCACTGGACCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000143255.3 ENSMUST00000213404.2 ENSMUST00000217635.2 |
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| 3UTR-3UTR CAA 90 bp | ACAGACCCCACAGGAGAAGCTGTGGCTAGTAGTCACATACACTATGTCCCAAGCCCCCCTTCTCTCCTCTaGGGCATGGCTGGTCTCTCT | + |
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Preference number: 3 (lower is better) Translates to: TDPTGEAVASSHIHYVPSPPSLL*GMAGLS Trigger: AGAGAGACCAGCCATGCCCAAGAGGAGAGAAGGGGG...GCTTGGGACATAGTGTATGTGACTACTAGCCACAGCTTCTCCTGTGGGGTCTGT 56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000143255.3 ENSMUST00000213404.2 ENSMUST00000217635.2 |
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| 3UTR-3UTR CAA 90 bp | CCCTGTAGAGTGGGGTCCAGTGGCTTCATACAGCCAGATGCCCACCTGCGGCAGGTCAAGCCTATTAGATaGACTTATCTCCACTTAAAC | + |
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Preference number: 3 (lower is better) Translates to: PCRVGSSGFIQPDAHLRQVKPIR*TYLHLN Trigger: GTTTAAGTGGAGATAAGTCAATCTAATAGGCTTGAC...CTGCCGCAGGTGGGCATCTGGCTGTATGAAGCCACTGGACCCCACTCTACAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000143255.3 ENSMUST00000213404.2 ENSMUST00000217635.2 |
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| 3UTR-3UTR CAA 90 bp | GCCCCTCCTCACTCTCTTACTCTCTCACTCTTTGCTCTCTTAAGCTTTTACTTTCCCCCTTCTCTCCTCTaGGGCATGGCTGGTCTCTCT | + |
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Preference number: 3 (lower is better) Translates to: APPHSLTLSLFALLSFYFPPSLL*GMAGLS Trigger: AGAGAGACCAGCCATGCCCAAGAGGAGAGAAGGGGG...AAAGTAAAAGCTTAAGAGAGCAAAGAGTGAGAGAGTAAGAGAGTGAGGAGGGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000143255.3 ENSMUST00000213404.2 ENSMUST00000217635.2 |
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| 3UTR CCA 72 bp | AATTTACCGCCCACACAGACCCCACAGGAGAAGCTGTaGCTAGTAGTCACATACACTATGTCCCAAGCTTCT | + |
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Preference number: 3 (lower is better) Translates to: NLPPTQTPQEKL*LVVTYTMSQAS Trigger: AGAAGCTTGGGACATAGTGTATGTGACTACTAGCCACAGCTTCTCCTGTGGGGTCTGTGTGGGCGGTAAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000143255.3 ENSMUST00000213404.2 ENSMUST00000217635.2 |
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| 3UTR GCA 72 bp | TCTGGGGCTGGTGAAATGACTCAACAGATAAGAGACTaGTCTTTTGGAGGTCCTGAGCTCAAATCCCAGCAA | + |
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Preference number: 3 (lower is better) Translates to: SGAGEMTQQIRD*SFGGPELKSQQ Trigger: TTGCTGGGATTTGAGCTCAGGACCTCCAAAAGAGCAGTCTCTTATCTGTTGAGTCATTTCACCAGCCCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217635.2 |
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| 3UTR-3UTR CAA 90 bp | TCTCTTTGCACACAGAGGCTGTTGGGTTTATGTATACATGTTTTTACACATGATATTGAGGGCTGCCCCTaGTCCACCCCCTGTAGAGTG | + |
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Preference number: 3 (lower is better) Translates to: SLCTQRLLGLCIHVFTHDIEGCP*STPCRV Trigger: CACTCTACAGGGGGTGGACAAGGGGCAGCCCTCAAT...ATCATGTGTAAAAACATGTATACATAAACCCAACAGCCTCTGTGTGCAAAGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000143255.3 ENSMUST00000213404.2 ENSMUST00000217635.2 |
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| 3UTR-3UTR CAA 90 bp | GCTCTTTTGGAGGTCCTGAGCTCAAATCCCAGCAACCACATGGTGGCTCATAACCCTCTTGGGACAGTTTaGTGTGTTTCTTTCCTAATT | + |
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Preference number: 3 (lower is better) Translates to: ALLEVLSSNPSNHMVAHNPLGTV*CVSFLI Trigger: AATTAGGAAAGAAACACACAAAACTGTCCCAAGAGG...GTTATGAGCCACCATGTGGTTGCTGGGATTTGAGCTCAGGACCTCCAAAAGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217635.2 |
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| 3UTR TCA 72 bp | GTTACTATGTCCATCTTTTTGCATGTGTACTTTCACTaGGCCCAGGTCCTCTTGGCTGCACACCAAACATAC | + |
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Preference number: 3 (lower is better) Translates to: VTMSIFLHVYFH*AQVLLAAHQTY Trigger: GTATGTTTGGTGTGCAGCCAAGAGGACCTGGGCTCAGTGAAAGTACACATGCAAAAAGATGGACATAGTAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000143255.3 ENSMUST00000213404.2 ENSMUST00000217635.2 |
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| 3UTR GCA 72 bp | TGTTGGTTTAAACATGTGTTACTATGTCCATCTTTTTaGATGTGTACTTTCACTGAGCCCAGGTCCTCTTGG | + |
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Preference number: 3 (lower is better) Translates to: CWFKHVLLCPSF*MCTFTEPRSSW Trigger: CCAAGAGGACCTGGGCTCAGTGAAAGTACACATGCAAAAAGATGGACATAGTAACACATGTTTAAACCAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000143255.3 ENSMUST00000213404.2 ENSMUST00000217635.2 |
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| 3UTR-3UTR CAA 90 bp | GCCCCTCCTCACTCTCTTACTCTCTCACTCTTTGCTCTCTTAAGCTTTTACTTTTCCACTGTTCTCTATTaGCTTTTTGAGTCAAAGACT | + |
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Preference number: 3 (lower is better) Translates to: APPHSLTLSLFALLSFYFSTVLY*LFESKT Trigger: AGTCTTTGACTCAAAAAGCAAATAGAGAACAGTGGA...AAAGTAAAAGCTTAAGAGAGCAAAGAGTGAGAGAGTAAGAGAGTGAGGAGGGGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000143255.3 ENSMUST00000213404.2 ENSMUST00000217635.2 |
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| 3UTR TCA 72 bp | GAGGCTGTTGGGTTTATGTATACATGTTTTTACACATaGTGCGGCGATTGTGATTGTGCCTATACAGATGAA | + |
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Preference number: 3 (lower is better) Translates to: EAVGFMYTCFYT*CGDCDCAYTDE Trigger: TTCATCTGTATAGGCACAATCACAATCGCCGCATCATGTGTAAAAACATGTATACATAAACCCAACAGCCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000143255.3 ENSMUST00000213404.2 ENSMUST00000217635.2 |
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| 3UTR TCA 72 bp | GCCTCTGTTTTTGCTGTGTTCTCTGCATTTCAAGGTTaGGTTCTCACAGTATCTCTCAGAAAAAGATTTCCT | + |
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Preference number: 3 (lower is better) Translates to: ASVFAVFSAFQG*VLTVSLRKRFP Trigger: AGGAAATCTTTTTCTGAGAGATACTGTGAGAACTCAACCTTGAAATGCAGAGAACACAGCAAAAACAGAGGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000217635.2 |
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| 3UTR GCA 72 bp | AACCTAAATTCATGCCTCTGTTTTTGCTGTGTTCTCTaGATTTCAAGGTTGAGTTCTCACAGTATCTCTCAG | + |
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Preference number: 3 (lower is better) Translates to: NLNSCLCFCCVL*ISRLSSHSISQ Trigger: CTGAGAGATACTGTGAGAACTCAACCTTGAAATGCAGAGAACACAGCAAAAACAGAGGCATGAATTTAGGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217635.2 |
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| 3UTR CCA 72 bp | TCACACCATTTTTGTCTCTTTGCACACAGAGGCTGTTaGGTTTATGTATACATGTTTTTACACATGATGCGG | + |
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Preference number: 3 (lower is better) Translates to: SHHFCLFAHRGC*VYVYMFLHMMR Trigger: CCGCATCATGTGTAAAAACATGTATACATAAACCCAACAGCCTCTGTGTGCAAAGAGACAAAAATGGTGTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000143255.3 ENSMUST00000213404.2 ENSMUST00000217635.2 |
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| 3UTR GCA 72 bp | ACTGTTCTAAGTGTAGTCACACCATTTTTGTCTCTTTaGACACAGAGGCTGTTGGGTTTATGTATACATGTT | + |
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Preference number: 3 (lower is better) Translates to: TVLSVVTPFLSL*TQRLLGLCIHV Trigger: AACATGTATACATAAACCCAACAGCCTCTGTGTGCAAAGAGACAAAAATGGTGTGACTACACTTAGAACAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000143255.3 ENSMUST00000213404.2 ENSMUST00000217635.2 |
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| 3UTR-3UTR CAA 90 bp | CATTTTTGTCTCTTTGCACACAGAGGCTGTTGGGTTTATGTATACATGTTTTTAGTCAAGCCTATTAGATaGACTTATCTCCACTTAAAC | + |
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Preference number: 3 (lower is better) Translates to: HFCLFAHRGCWVYVYMFLVKPIR*TYLHLN Trigger: GTTTAAGTGGAGATAAGTCAATCTAATAGGCTTGAC...TAAAAACATGTATACATAAACCCAACAGCCTCTGTGTGCAAAGAGACAAAAATG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000143255.3 ENSMUST00000213404.2 ENSMUST00000217635.2 |
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| 3UTR-3UTR CAA 90 bp | CATTTTTGTCTCTTTGCACACAGAGGCTGTTGGGTTTATGTATACATGTTTTTATCCACTGTTCTCTATTaGCTTTTTGAGTCAAAGACT | + |
|
Preference number: 3 (lower is better) Translates to: HFCLFAHRGCWVYVYMFLSTVLY*LFESKT Trigger: AGTCTTTGACTCAAAAAGCAAATAGAGAACAGTGGA...TAAAAACATGTATACATAAACCCAACAGCCTCTGTGTGCAAAGAGACAAAAATG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000143255.3 ENSMUST00000213404.2 ENSMUST00000217635.2 |
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| 3UTR TCA 72 bp | CTGTTCTCTATTTGCTTTTTGAGTCAAAGACTAGACTaGACATTGAATTTGCAGTTTGTCAAGCCTATTAGA | + |
|
Preference number: 3 (lower is better) Translates to: LFSICFLSQRLD*TLNLQFVKPIR Trigger: TCTAATAGGCTTGACAAACTGCAAATTCAATGTTCAGTCTAGTCTTTGACTCAAAAAGCAAATAGAGAACAG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000143255.3 ENSMUST00000213404.2 ENSMUST00000217635.2 |
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| CDS-3UTR CCA 90 bp | CCCTGTAGAGTGGGGTCCAGTGGCTTCATACAGCCAGATGCCCACCTGCGGCAGACAACGACTGTAATATaGGACCCACAGGTGGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PCRVGSSGFIQPDAHLRQTTTVI*DPQVER Trigger: TCTCTCCACCTGTGGGTCCCATATTACAGTCGTTGT...CTGCCGCAGGTGGGCATCTGGCTGTATGAAGCCACTGGACCCCACTCTACAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000143255.3 ENSMUST00000213404.2 ENSMUST00000217635.2 |
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| CDS-3UTR GCA 90 bp | CCCTGTAGAGTGGGGTCCAGTGGCTTCATACAGCCAGATGCCCACCTGCGGCAGATTTGTATGATAGAATaGAAGAATCCCCCAGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PCRVGSSGFIQPDAHLRQICMIE*KNPPAH Trigger: ATGGGCTGGGGGATTCTTGCATTCTATCATACAAAT...CTGCCGCAGGTGGGCATCTGGCTGTATGAAGCCACTGGACCCCACTCTACAGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000143255.3 ENSMUST00000213404.2 ENSMUST00000217635.2 |
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| CDS-3UTR GCA 90 bp | TACAGCCAGATGCCCACCTGCGGCAGAGTAGAAAGCATCTGGCAGTCCTCCCACATTTGTATGATAGAATaGAAGAATCCCCCAGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: YSQMPTCGRVESIWQSSHICMIE*KNPPAH Trigger: ATGGGCTGGGGGATTCTTGCATTCTATCATACAAAT...GTGGGAGGACTGCCAGATGCTTTCTACTCTGCCGCAGGTGGGCATCTGGCTGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000143255.3 ENSMUST00000213404.2 ENSMUST00000217635.2 |
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| CDS-3UTR CCA 90 bp | ACAGACCCCACAGGAGAAGCTGTGGCTAGTAGTCACATACACTATGTCCCAAGCCGCCCTTCAGAACTGTaGGCTCTCAAAGAGAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: TDPTGEAVASSHIHYVPSRPSEL*ALKENK Trigger: CTTGTTCTCTTTGAGAGCCCACAGTTCTGAAGGGCG...GCTTGGGACATAGTGTATGTGACTACTAGCCACAGCTTCTCCTGTGGGGTCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000143255.3 ENSMUST00000213404.2 ENSMUST00000217635.2 |
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| CDS-3UTR CCA 90 bp | CAGGTCCTCTTGGCTGCACACCAAACATACTTACTGATTGATCTCTCCAGAACTCGCCCTTCAGAACTGTaGGCTCTCAAAGAGAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: QVLLAAHQTYLLIDLSRTRPSEL*ALKENK Trigger: CTTGTTCTCTTTGAGAGCCCACAGTTCTGAAGGGCG...AGTTCTGGAGAGATCAATCAGTAAGTATGTTTGGTGTGCAGCCAAGAGGACCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000143255.3 ENSMUST00000213404.2 ENSMUST00000217635.2 |
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| CDS-3UTR CCA 90 bp | ACAGACCCCACAGGAGAAGCTGTGGCTAGTAGTCACATACACTATGTCCCAAGCTGTATGGCAAACAATTaGGTCATGCAGCCTTCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: TDPTGEAVASSHIHYVPSCMANN*VMQPSK Trigger: TTTTGAAGGCTGCATGACCCAATTGTTTGCCATACA...GCTTGGGACATAGTGTATGTGACTACTAGCCACAGCTTCTCCTGTGGGGTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000143255.3 ENSMUST00000213404.2 ENSMUST00000217635.2 |
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| CDS-3UTR CCA 90 bp | GCCCCTCCTCACTCTCTTACTCTCTCACTCTTTGCTCTCTTAAGCTTTTACTTTACAACGACTGTAATATaGGACCCACAGGTGGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: APPHSLTLSLFALLSFYFTTTVI*DPQVER Trigger: TCTCTCCACCTGTGGGTCCCATATTACAGTCGTTGT...AAAGTAAAAGCTTAAGAGAGCAAAGAGTGAGAGAGTAAGAGAGTGAGGAGGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000143255.3 ENSMUST00000213404.2 ENSMUST00000217635.2 |
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| CDS-3UTR TCA 90 bp | CAGGTCCTCTTGGCTGCACACCAAACATACTTACTGATTGATCTCTCCAGAACTTCAACTTTTGTGTTCTaGGAAAGACCCAGGAGTATG | + |
|
Preference number: 4 (lower is better) Translates to: QVLLAAHQTYLLIDLSRTSTFVF*ERPRSM Trigger: CATACTCCTGGGTCTTTCTCAGAACACAAAAGTTGA...AGTTCTGGAGAGATCAATCAGTAAGTATGTTTGGTGTGCAGCCAAGAGGACCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000143255.3 ENSMUST00000213404.2 ENSMUST00000217635.2 |
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| CDS-3UTR GCA 90 bp | CAGGTCCTCTTGGCTGCACACCAAACATACTTACTGATTGATCTCTCCAGAACTGCTGTAGATGATAGTTaGCACAATTATCATGTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: QVLLAAHQTYLLIDLSRTAVDDS*HNYHVA Trigger: GGCAACATGATAATTGTGGCAACTATCATCTACAGC...AGTTCTGGAGAGATCAATCAGTAAGTATGTTTGGTGTGCAGCCAAGAGGACCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000143255.3 ENSMUST00000213404.2 ENSMUST00000217635.2 |
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| CDS-3UTR GCA 90 bp | CAGGTCCTCTTGGCTGCACACCAAACATACTTACTGATTGATCTCTCCAGAACTAAATTTGTGTGTCAGTaGAGGCAAGCTTCAGTAATG | + |
|
Preference number: 4 (lower is better) Translates to: QVLLAAHQTYLLIDLSRTKFVCQ*RQASVM Trigger: CATTACTGAAGCTTGCCTGCACTGACACACAAATTT...AGTTCTGGAGAGATCAATCAGTAAGTATGTTTGGTGTGCAGCCAAGAGGACCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000143255.3 ENSMUST00000213404.2 ENSMUST00000217635.2 |
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| CDS-3UTR CCA 90 bp | CAGGTCCTCTTGGCTGCACACCAAACATACTTACTGATTGATCTCTCCAGAACTTGTATGGCAAACAATTaGGTCATGCAGCCTTCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: QVLLAAHQTYLLIDLSRTCMANN*VMQPSK Trigger: TTTTGAAGGCTGCATGACCCAATTGTTTGCCATACA...AGTTCTGGAGAGATCAATCAGTAAGTATGTTTGGTGTGCAGCCAAGAGGACCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000143255.3 ENSMUST00000213404.2 ENSMUST00000217635.2 |
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| CDS-3UTR GCA 90 bp | GCCCCTCCTCACTCTCTTACTCTCTCACTCTTTGCTCTCTTAAGCTTTTACTTTATTTGTATGATAGAATaGAAGAATCCCCCAGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: APPHSLTLSLFALLSFYFICMIE*KNPPAH Trigger: ATGGGCTGGGGGATTCTTGCATTCTATCATACAAAT...AAAGTAAAAGCTTAAGAGAGCAAAGAGTGAGAGAGTAAGAGAGTGAGGAGGGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000143255.3 ENSMUST00000213404.2 ENSMUST00000217635.2 |
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| CDS-3UTR GCA 90 bp | GCCCCTCCTCACTCTCTTACTCTCTCACTCTTTGCTCTCTTAAGCTTTTACTTTAAATTTGTGTGTCAGTaGAGGCAAGCTTCAGTAATG | + |
|
Preference number: 4 (lower is better) Translates to: APPHSLTLSLFALLSFYFKFVCQ*RQASVM Trigger: CATTACTGAAGCTTGCCTGCACTGACACACAAATTT...AAAGTAAAAGCTTAAGAGAGCAAAGAGTGAGAGAGTAAGAGAGTGAGGAGGGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000143255.3 ENSMUST00000213404.2 ENSMUST00000217635.2 |
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| CDS-3UTR TCA 90 bp | CTCTGTTTTTGCTGTGTTCTCTGCATTTCAAGGTTGAGTTCTCACAGTATCTCTTCAACTTTTGTGTTCTaGGAAAGACCCAGGAGTATG | + |
|
Preference number: 4 (lower is better) Translates to: LCFCCVLCISRLSSHSISSTFVF*ERPRSM Trigger: CATACTCCTGGGTCTTTCTCAGAACACAAAAGTTGA...AGAGATACTGTGAGAACTCAACCTTGAAATGCAGAGAACACAGCAAAAACAGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217635.2 |
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| CDS-3UTR TCA 90 bp | TCTCTTTGCACACAGAGGCTGTTGGGTTTATGTATACATGTTTTTACACATGATTCAACTTTTGTGTTCTaGGAAAGACCCAGGAGTATG | + |
|
Preference number: 4 (lower is better) Translates to: SLCTQRLLGLCIHVFTHDSTFVF*ERPRSM Trigger: CATACTCCTGGGTCTTTCTCAGAACACAAAAGTTGA...ATCATGTGTAAAAACATGTATACATAAACCCAACAGCCTCTGTGTGCAAAGAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000143255.3 ENSMUST00000213404.2 ENSMUST00000217635.2 |
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| 3UTR CAA 72 bp | AACTGTTCTAAGTGTAGTCACACCATTTTTGTCTCTTaGCACACAGAGGCTGTTGGGTTTATGTATACATGT | + |
|
Preference number: 4 (lower is better) Translates to: NCSKCSHTIFVS*HTEAVGFMYTC Trigger: ACATGTATACATAAACCCAACAGCCTCTGTGTGCAAAGAGACAAAAATGGTGTGACTACACTTAGAACAGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000143255.3 ENSMUST00000213404.2 ENSMUST00000217635.2 |
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| CDS-3UTR GCA 90 bp | CATTTTTGTCTCTTTGCACACAGAGGCTGTTGGGTTTATGTATACATGTTTTTAGCTGTAGATGATAGTTaGCACAATTATCATGTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: HFCLFAHRGCWVYVYMFLAVDDS*HNYHVA Trigger: GGCAACATGATAATTGTGGCAACTATCATCTACAGC...TAAAAACATGTATACATAAACCCAACAGCCTCTGTGTGCAAAGAGACAAAAATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000143255.3 ENSMUST00000213404.2 ENSMUST00000217635.2 |
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| CDS-3UTR CCA 90 bp | TCTCCACTTAAACACTGTTGGTTTAAACATGTGTTACTATGTCCATCTTTTTGCTGTATGGCAAACAATTaGGTCATGCAGCCTTCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SPLKHCWFKHVLLCPSFCCMANN*VMQPSK Trigger: TTTTGAAGGCTGCATGACCCAATTGTTTGCCATACA...GCAAAAAGATGGACATAGTAACACATGTTTAAACCAACAGTGTTTAAGTGGAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000143255.3 ENSMUST00000213404.2 ENSMUST00000217635.2 |
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| CDS-3UTR CAA 90 bp | CCCTGTAGAGTGGGGTCCAGTGGCTTCATACAGCCAGATGCCCACCTGCGGCAGCAAAATAACAAAAATTaGTGTGTCAGTGCAGGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: PCRVGSSGFIQPDAHLRQQNNKN*CVSAGK Trigger: CTTGCCTGCACTGACACACAAATTTTTGTTATTTTG...CTGCCGCAGGTGGGCATCTGGCTGTATGAAGCCACTGGACCCCACTCTACAGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000143255.3 ENSMUST00000213404.2 ENSMUST00000217635.2 |
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| CDS-3UTR CAA 90 bp | ACAGACCCCACAGGAGAAGCTGTGGCTAGTAGTCACATACACTATGTCCCAAGCGTGTATGGCAAACAATaGGGTCATGCAGCCTTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: TDPTGEAVASSHIHYVPSVYGKQ*GHAAFK Trigger: TTTGAAGGCTGCATGACCCAATTGTTTGCCATACAC...GCTTGGGACATAGTGTATGTGACTACTAGCCACAGCTTCTCCTGTGGGGTCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000143255.3 ENSMUST00000213404.2 ENSMUST00000217635.2 |
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| CDS-3UTR CAA 90 bp | CAGGTCCTCTTGGCTGCACACCAAACATACTTACTGATTGATCTCTCCAGAACTGTGTATGGCAAACAATaGGGTCATGCAGCCTTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: QVLLAAHQTYLLIDLSRTVYGKQ*GHAAFK Trigger: TTTGAAGGCTGCATGACCCAATTGTTTGCCATACAC...AGTTCTGGAGAGATCAATCAGTAAGTATGTTTGGTGTGCAGCCAAGAGGACCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000143255.3 ENSMUST00000213404.2 ENSMUST00000217635.2 |
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| CDS-3UTR CAA 90 bp | ACAGACCCCACAGGAGAAGCTGTGGCTAGTAGTCACATACACTATGTCCCAAGCAATGGTGTCAGGACATaGGCAAATATAAGTGTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: TDPTGEAVASSHIHYVPSNGVRT*ANISVF Trigger: AAACACACTTATATTTGCCAATGTCCTGACACCATT...GCTTGGGACATAGTGTATGTGACTACTAGCCACAGCTTCTCCTGTGGGGTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000143255.3 ENSMUST00000213404.2 ENSMUST00000217635.2 |
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| CDS-3UTR CAA 90 bp | CAGGTCCTCTTGGCTGCACACCAAACATACTTACTGATTGATCTCTCCAGAACTCAAAATAACAAAAATTaGTGTGTCAGTGCAGGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: QVLLAAHQTYLLIDLSRTQNNKN*CVSAGK Trigger: CTTGCCTGCACTGACACACAAATTTTTGTTATTTTG...AGTTCTGGAGAGATCAATCAGTAAGTATGTTTGGTGTGCAGCCAAGAGGACCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000143255.3 ENSMUST00000213404.2 ENSMUST00000217635.2 |
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| CDS-3UTR CAA 90 bp | TCTCCACTTAAACACTGTTGGTTTAAACATGTGTTACTATGTCCATCTTTTTGCGTGTATGGCAAACAATaGGGTCATGCAGCCTTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: SPLKHCWFKHVLLCPSFCVYGKQ*GHAAFK Trigger: TTTGAAGGCTGCATGACCCAATTGTTTGCCATACAC...GCAAAAAGATGGACATAGTAACACATGTTTAAACCAACAGTGTTTAAGTGGAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000143255.3 ENSMUST00000213404.2 ENSMUST00000217635.2 |
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| CDS-3UTR CAA 90 bp | CATTTTTGTCTCTTTGCACACAGAGGCTGTTGGGTTTATGTATACATGTTTTTAAATGGTGTCAGGACATaGGCAAATATAAGTGTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: HFCLFAHRGCWVYVYMFLNGVRT*ANISVF Trigger: AAACACACTTATATTTGCCAATGTCCTGACACCATT...TAAAAACATGTATACATAAACCCAACAGCCTCTGTGTGCAAAGAGACAAAAATG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000143255.3 ENSMUST00000213404.2 ENSMUST00000217635.2 |
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| CDS GCA 72 bp | AATTTGTATGATAGAATGCAAGAATCCCCCAGCCCATaGTATGCCTACCAACACACCACAGACCCTCTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: NLYDRMQESPSP*YAYQHTTDPLA Trigger: AGCAAGAGGGTCTGTGGTGTGTTGGTAGGCATAGCATGGGCTGGGGGATTCTTGCATTCTATCATACAAATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000099795.2 ENSMUST00000143255.3 ENSMUST00000213404.2 ENSMUST00000217635.2 |
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