Pregenerated sensors for OLFR1220 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000101480Ensembl transcript IDs: ENSMUST00000099789.5, ENSMUST00000099806.3, ENSMUST00000213288.2
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCAATACACCCACTCGTCCTTCCTGGACCTGGCATTCCCCTATTCTaGGACATAAAACCTTCACAGGACCAAGGGCCTCTCCTCCCATTG | + |
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Preference number: 1 (lower is better) Translates to: PIHPLVLPGPGIPLF*DIKPSQDQGPLLPL Trigger: CAATGGGAGGAGAGGCCCTTGGTCCTGTGAAGGTTTTATGTCTCAGAATAGGGGAATGCCAGGTCCAGGAAGGACGAGTGGGTGTATTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213288.2 |
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| 3UTR TCA 90 bp | CATAAAACCTTCACAGGACCAAGGGCCTCTCCTCCCATTGGTGACTaGCTAGGCCATTCTCTGCTACATATGCAGCTAGAGCCATGGGTC | + |
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Preference number: 1 (lower is better) Translates to: HKTFTGPRASPPIGD*LGHSLLHMQLEPWV Trigger: GACCCATGGCTCTAGCTGCATATGTAGCAGAGAATGGCCTAGTCAGTCACCAATGGGAGGAGAGGCCCTTGGTCCTGTGAAGGTTTTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213288.2 |
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| 3UTR CCA 90 bp | GGGCAGTACTTACCAGTTGCTCTGAGTACAGCAGATCCTCTCAGATaGTCAGGATATAGTGTCTTCAGGGGAGCAGATCAGCTAGCAGTC | + |
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Preference number: 1 (lower is better) Translates to: GQYLPVALSTADPLR*SGYSVFRGADQLAV Trigger: GACTGCTAGCTGATCTGCTCCCCTGAAGACACTATATCCTGACCATCTGAGAGGATCTGCTGTACTCAGAGCAACTGGTAAGTACTGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213288.2 |
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| 3UTR TCA 90 bp | TATGCCTATCTATTATGTGCTGTGAGACATAAATATCTGTATATATaGGGAGTGGACAGTACTTCTTCCGATACACATGAACTTAGAGCC | + |
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Preference number: 1 (lower is better) Translates to: YAYLLCAVRHKYLYI*GVDSTSSDTHELRA Trigger: GGCTCTAAGTTCATGTGTATCGGAAGAAGTACTGTCCACTCCTCATATATACAGATATTTATGTCTCACAGCACATAATAGATAGGCATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213288.2 |
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| 3UTR TCA 90 bp | GAATTCATTAGTCTTAATTTCATGATAATTGGGTTAAACATGGAGTaGTATGGCTTGCTTCTTACATGGGTTCTGAGAGTCCCAACTCAT | + |
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Preference number: 1 (lower is better) Translates to: EFISLNFMIIGLNME*YGLLLTWVLRVPTH Trigger: ATGAGTTGGGACTCTCAGAACCCATGTAAGAAGCAAGCCATATCACTCCATGTTTAACCCAATTATCATGAAATTAAGACTAATGAATTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213288.2 |
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| 3UTR TCA 90 bp | GTTGTGATGGATGACTTTGGGTATGAAAACCTAATGGTTTCAAATTaGTCGTACCTTTCCATATTGCAGGAGCTTTCTTTAATTTCCATT | + |
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Preference number: 1 (lower is better) Translates to: VVMDDFGYENLMVSN*SYLSILQELSLISI Trigger: AATGGAAATTAAAGAAAGCTCCTGCAATATGGAAAGGTACGATCAATTTGAAACCATTAGGTTTTCATACCCAAAGTCATCCATCACAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213288.2 |
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| 3UTR-3UTR TCA 90 bp | ACCTTATCCCTTACCCCCTCACCCTGCTCACCAATACACCCACTCGTCCTTCCTCGGGGCCTGGCAAAGTaGATGCTCACAGTCAGCTAT | + |
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Preference number: 2 (lower is better) Translates to: TLSLTPSPCSPIHPLVLPRGLAK*MLTVSY Trigger: ATAGCTGACTGTGAGCATTCACTTTGCCAGGCCCCG...AGGAAGGACGAGTGGGTGTATTGGTGAGCAGGGTGAGGGGGTAAGGGATAAGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213288.2 |
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| 3UTR-3UTR CCA 90 bp | ACCTTATCCCTTACCCCCTCACCCTGCTCACCAATACACCCACTCGTCCTTCCTATAATTGCCAGAAGCTaGAAAGAACCCAGATGCCCC | + |
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Preference number: 2 (lower is better) Translates to: TLSLTPSPCSPIHPLVLPIIARS*KEPRCP Trigger: GGGGCATCTGGGTTCTTTCCAGCTTCTGGCAATTAT...AGGAAGGACGAGTGGGTGTATTGGTGAGCAGGGTGAGGGGGTAAGGGATAAGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213288.2 |
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| 3UTR-3UTR TCA 90 bp | ACCTTATCCCTTACCCCCTCACCCTGCTCACCAATACACCCACTCGTCCTTCCTGGTGAAACAACAATATaGACTAACCAGTACCTCCCG | + |
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Preference number: 2 (lower is better) Translates to: TLSLTPSPCSPIHPLVLPGETTI*TNQYLP Trigger: CGGGAGGTACTGGTTAGTTCATATTGTTGTTTCACC...AGGAAGGACGAGTGGGTGTATTGGTGAGCAGGGTGAGGGGGTAAGGGATAAGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213288.2 |
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| 3UTR-3UTR GCA 90 bp | ATTGCCAGAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGAAATGGATACAGGGACCATCTAGAGAATaGCATATCCAGGGATCCATC | + |
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Preference number: 2 (lower is better) Translates to: IARSWKEPRCPSTEKWIQGPSRE*HIQGSI Trigger: GATGGATCCCTGGATATGGCATTCTCTAGATGGTCC...CTGTATCCATTTCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTTCTGGCAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213288.2 |
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| 3UTR-3UTR GCA 90 bp | AGTACAGCAGATCCTCTCAGATGGTCAGGATATAGTGTCTTCAGGGGAGCAGATGGACCTAAAGGGATCTaGAACCCTATAGGTGAAACA | + |
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Preference number: 2 (lower is better) Translates to: STADPLRWSGYSVFRGADGPKGI*NPIGET Trigger: TGTTTCACCTATAGGGTTGCAGATCCCTTTAGGTCC...ATCTGCTCCCCTGAAGACACTATATCCTGACCATCTGAGAGGATCTGCTGTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213288.2 |
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| 3UTR-3UTR TCA 90 bp | GTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGTAAATTGGACATAGTAACTGCTCTGACCCATTaGCCAATCTCTTCAGCACTA | + |
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Preference number: 2 (lower is better) Translates to: VQPLWKSVWRFLSKLDIVTALTH*PISSAL Trigger: TAGTGCTGAAGAGATTGGTCAATGGGTCAGAGCAGT...TACTATGTCCAATTTACTGAGGAACCGCCAGACTGATTTCCAGAGTGGTTGTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213288.2 |
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| 3UTR-3UTR TCA 90 bp | CATATGTTTTCTTTGATTGGTGGTTTAGTCCCAGGGAGCTCTGAGGTTACTGGTGACAAACTTTGGAGCTaGGATGAAAGGATGGACCAT | + |
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Preference number: 2 (lower is better) Translates to: HMFSLIGGLVPGSSEVTGDKLWS*DERMDH Trigger: ATGGTCCATCCTTTCATCTCAGCTCCAAAGTTTGTC...ACCAGTAACCTCAGAGCTCCCTGGGACTAAACCACCAATCAAAGAAAACATATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213288.2 |
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| 3UTR-3UTR CCA 90 bp | GTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGTAAATTGGACATAGTAAAATTCCTAGGCAAATaGATGGACCTGGAGGTAACC | + |
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Preference number: 2 (lower is better) Translates to: VQPLWKSVWRFLSKLDIVKFLGK*MDLEVT Trigger: GGTTACCTCCAGGTCCATCCATTTGCCTAGGAATTT...TACTATGTCCAATTTACTGAGGAACCGCCAGACTGATTTCCAGAGTGGTTGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213288.2 |
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| 3UTR-3UTR CCA 90 bp | AGTACAGCAGATCCTCTCAGATGGTCAGGATATAGTGTCTTCAGGGGAGCAGATTATGTTTTCTTTGATTaGTGGTTTAGTCCCAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: STADPLRWSGYSVFRGADYVFFD*WFSPRE Trigger: CTCCCTGGGACTAAACCACCAATCAAAGAAAACATA...ATCTGCTCCCCTGAAGACACTATATCCTGACCATCTGAGAGGATCTGCTGTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213288.2 |
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| 3UTR-3UTR TCA 90 bp | AGTACAGCAGATCCTCTCAGATGGTCAGGATATAGTGTCTTCAGGGGAGCAGATAAGGGGTACTTATTATaGCTATCTATGACGCCAAAT | + |
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Preference number: 2 (lower is better) Translates to: STADPLRWSGYSVFRGADKGYLL*LSMTPN Trigger: ATTTGGCGTCATAGATAGTCATAATAAGTACCCCTT...ATCTGCTCCCCTGAAGACACTATATCCTGACCATCTGAGAGGATCTGCTGTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213288.2 |
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| 3UTR-3UTR TCA 90 bp | ATTGCCAGAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGAAATGGATACAGCTAGCAAGATTTTGCTaGAAGGACAATGATATAGCT | + |
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Preference number: 2 (lower is better) Translates to: IARSWKEPRCPSTEKWIQLARFC*KDNDIA Trigger: AGCTATATCATTGTCCTTTCAGCAAAATCTTGCTAG...CTGTATCCATTTCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTTCTGGCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213288.2 |
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| 3UTR-3UTR TCA 90 bp | AAGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGTAAATTGGACGAACTCACTGATAAGTaGATATTAGCCCAGAAACTT | + |
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Preference number: 2 (lower is better) Translates to: KLVQPLWKSVWRFLSKLDELTDK*ILAQKL Trigger: AAGTTTCTGGGCTAATATTCACTTATCAGTGAGTTC...GTCCAATTTACTGAGGAACCGCCAGACTGATTTCCAGAGTGGTTGTACAAGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213288.2 |
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| 3UTR CAA 90 bp | AAACACATGAAACTCAAGAAGAATGATGACCAAATTGTGGGTACTTaGCCCCTTCTTAGAACTGGGAACAAAACACCCATGGAAGGAGTT | + |
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Preference number: 2 (lower is better) Translates to: KHMKLKKNDDQIVGT*PLLRTGNKTPMEGV Trigger: AACTCCTTCCATGGGTGTTTTGTTCCCAGTTCTAAGAAGGGGCAAAGTACCCACAATTTGGTCATCATTCTTCTTGAGTTTCATGTGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213288.2 |
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| 3UTR-3UTR GCA 90 bp | GTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGTAAATTGGACATAGTAATCATAATTAGCAACTaGTCTGACCCATTGACCAAT | + |
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Preference number: 2 (lower is better) Translates to: VQPLWKSVWRFLSKLDIVIIISN*SDPLTN Trigger: ATTGGTCAATGGGTCAGAGCAGTTGCTAATTATGAT...TACTATGTCCAATTTACTGAGGAACCGCCAGACTGATTTCCAGAGTGGTTGTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213288.2 |
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| 3UTR-3UTR GCA 90 bp | AGATTCCATCTCACACCAGTCAGAATGGCTAAAATCAAAAATTCAGGTGACAACAAATTGTGGGTACTTTaGCCCTTCTTAGAACTGGGA | + |
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Preference number: 2 (lower is better) Translates to: RFHLTPVRMAKIKNSGDNKLWVL*PFLELG Trigger: TCCCAGTTCTAAGAAGGGGCAAAGTACCCACAATTT...GTTGTCACCTGAATTTTTGATTTTAGCCATTCTGACTGGTGTGAGATGGAATCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213288.2 |
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| 3UTR TCA 72 bp | GGGGGCAGCGGCAGGGGCAGTACTTACCAGTTGCTCTaGGTACAGCAGATCCTCTCAGATGGTCAGGATATA | + |
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Preference number: 3 (lower is better) Translates to: GGSGRGSTYQLL*VQQILSDGQDI Trigger: TATATCCTGACCATCTGAGAGGATCTGCTGTACTCAGAGCAACTGGTAAGTACTGCCCCTGCCGCTGCCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213288.2 |
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| 3UTR GCA 72 bp | CCCTCTGAAAATACCTTATCCCTTACCCCCTCACCCTaGTCACCAATACACCCACTCGTCCTTCCTGGACCT | + |
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Preference number: 3 (lower is better) Translates to: PSENTLSLTPSP*SPIHPLVLPGP Trigger: AGGTCCAGGAAGGACGAGTGGGTGTATTGGTGAGCAGGGTGAGGGGGTAAGGGATAAGGTATTTTCAGAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213288.2 |
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| 3UTR TCA 72 bp | TTCACAGGACCAAGGGCCTCTCCTCCCATTGGTGACTaGCTAGGCCATTCTCTGCTACATATGCAGCTAGAG | + |
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Preference number: 3 (lower is better) Translates to: FTGPRASPPIGD*LGHSLLHMQLE Trigger: CTCTAGCTGCATATGTAGCAGAGAATGGCCTAGTCAGTCACCAATGGGAGGAGAGGCCCTTGGTCCTGTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213288.2 |
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| 3UTR TCA 72 bp | AACCTTCACAGGACCAAGGGCCTCTCCTCCCATTGGTaGCTGACTAGGCCATTCTCTGCTACATATGCAGCT | + |
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Preference number: 3 (lower is better) Translates to: NLHRTKGLSSHW*LTRPFSATYAA Trigger: AGCTGCATATGTAGCAGAGAATGGCCTAGTCAGTCACCAATGGGAGGAGAGGCCCTTGGTCCTGTGAAGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213288.2 |
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| 3UTR-3UTR CAA 90 bp | ACCTTATCCCTTACCCCCTCACCCTGCTCACCAATACACCCACTCGTCCTTCCTAACTGCTCTGACCCATaGACCAATCTCTTCAGCACT | + |
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Preference number: 3 (lower is better) Translates to: TLSLTPSPCSPIHPLVLPNCSDP*TNLFST Trigger: AGTGCTGAAGAGATTGGTCAATGGGTCAGAGCAGTT...AGGAAGGACGAGTGGGTGTATTGGTGAGCAGGGTGAGGGGGTAAGGGATAAGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213288.2 |
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| 3UTR-3UTR CAA 90 bp | ACCTTATCCCTTACCCCCTCACCCTGCTCACCAATACACCCACTCGTCCTTCCTAGTGGGATTGCAAGCTaGTACAACCACTCTGGAAAT | + |
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Preference number: 3 (lower is better) Translates to: TLSLTPSPCSPIHPLVLPSGIAS*YNHSGN Trigger: ATTTCCAGAGTGGTTGTACAAGCTTGCAATCCCACT...AGGAAGGACGAGTGGGTGTATTGGTGAGCAGGGTGAGGGGGTAAGGGATAAGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213288.2 |
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| 3UTR CCA 72 bp | CTGCTCACCAATACACCCACTCGTCCTTCCTGGACCTaGCATTCCCCTATTCTGAGACATAAAACCTTCACA | + |
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Preference number: 3 (lower is better) Translates to: LLTNTPTRPSWT*HSPILRHKTFT Trigger: TGTGAAGGTTTTATGTCTCAGAATAGGGGAATGCCAGGTCCAGGAAGGACGAGTGGGTGTATTGGTGAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213288.2 |
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| 3UTR CCA 72 bp | CCAACTCTTCAGCTAGGCCCACTGGCCAGTGAACTTTaGGAATACTCATGCTCCCATCTTCCTAACAATAAG | + |
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Preference number: 3 (lower is better) Translates to: PTLQLGPLASEL*EYSCSHLPNNK Trigger: CTTATTGTTAGGAAGATGGGAGCATGAGTATTCCCAAAGTTCACTGGCCAGTGGGCCTAGCTGAAGAGTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213288.2 |
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| 3UTR CCA 72 bp | TTACCAGTTGCTCTGAGTACAGCAGATCCTCTCAGATaGTCAGGATATAGTGTCTTCAGGGGAGCAGATCAG | + |
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Preference number: 3 (lower is better) Translates to: LPVALSTADPLR*SGYSVFRGADQ Trigger: CTGATCTGCTCCCCTGAAGACACTATATCCTGACCATCTGAGAGGATCTGCTGTACTCAGAGCAACTGGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213288.2 |
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| 3UTR-3UTR CAA 90 bp | ATTGCCAGAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGAAATGGATACAGTTGAACTCACTTTTGTaGATTAGCAGTCTAGTGAGC | + |
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Preference number: 3 (lower is better) Translates to: IARSWKEPRCPSTEKWIQLNSLL*ISSLVS Trigger: GCTCACTAGACTGCTAATCAACAAAAGTGAGTTCAA...CTGTATCCATTTCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTTCTGGCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213288.2 |
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| 3UTR TCA 72 bp | TGGAAGGAGTTACAGAGACAAACTTTGGAGCTGAGATaGAAGGATGGACCATCTAGAGAATGCCATATCCAG | + |
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Preference number: 3 (lower is better) Translates to: WKELQRQTLELR*KDGPSRECHIQ Trigger: CTGGATATGGCATTCTCTAGATGGTCCATCCTTTCATCTCAGCTCCAAAGTTTGTCTCTGTAACTCCTTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213288.2 |
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| 3UTR TCA 72 bp | ACCCATGGAAGGAGTTACAGAGACAAACTTTGGAGCTaGGATGAAAGGATGGACCATCTAGAGAATGCCATA | + |
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Preference number: 3 (lower is better) Translates to: THGRSYRDKLWS*DERMDHLENAI Trigger: TATGGCATTCTCTAGATGGTCCATCCTTTCATCTCAGCTCCAAAGTTTGTCTCTGTAACTCCTTCCATGGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213288.2 |
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| 3UTR GCA 72 bp | CTAGGCCCACTGGCCAGTGAACTTTGGGAATACTCATaGTCCCATCTTCCTAACAATAAGATTATAGGCATA | + |
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Preference number: 3 (lower is better) Translates to: LGPLASELWEYS*SHLPNNKIIGI Trigger: TATGCCTATAATCTTATTGTTAGGAAGATGGGAGCATGAGTATTCCCAAAGTTCACTGGCCAGTGGGCCTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213288.2 |
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| 3UTR-3UTR CAA 90 bp | AGTACAGCAGATCCTCTCAGATGGTCAGGATATAGTGTCTTCAGGGGAGCAGATTCGTACCTTTCCATATaGCAGGAGCTTTCTTTAATT | + |
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Preference number: 3 (lower is better) Translates to: STADPLRWSGYSVFRGADSYLSI*QELSLI Trigger: AATTAAAGAAAGCTCCTGCAATATGGAAAGGTACGA...ATCTGCTCCCCTGAAGACACTATATCCTGACCATCTGAGAGGATCTGCTGTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213288.2 |
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| 3UTR CCA 72 bp | ATGGCTAAAATCAAAAATTCAGGTGACAACAGATGCTaGCAAGATGTGGAGAGAGAGGAACACTCCTCCATT | + |
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Preference number: 3 (lower is better) Translates to: MAKIKNSGDNRC*QDVEREEHSSI Trigger: AATGGAGGAGTGTTCCTCTCTCTCCACATCTTGCCAGCATCTGTTGTCACCTGAATTTTTGATTTTAGCCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213288.2 |
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| 3UTR-3UTR CAA 90 bp | TATAATTGCCAGAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGAAATGGATCTGTACAAATTAGTATaGATGCCTTCACGCTTTGCT | + |
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Preference number: 3 (lower is better) Translates to: YNCQKLERTQMPLNREMDLYKLV*MPSRFA Trigger: AGCAAAGCGTGAAGGCATCAATACTAATTTGTACAG...ATCCATTTCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTTCTGGCAATTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213288.2 |
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| 3UTR-3UTR CAA 90 bp | AGATTCCATCTCACACCAGTCAGAATGGCTAAAATCAAAAATTCAGGTGACAACCGGTTCCTCAGTAAATaGGACATAGTACTACAGGAG | + |
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Preference number: 3 (lower is better) Translates to: RFHLTPVRMAKIKNSGDNRFLSK*DIVLQE Trigger: CTCCTGTAGTACTATGTCCAATTTACTGAGGAACCG...GTTGTCACCTGAATTTTTGATTTTAGCCATTCTGACTGGTGTGAGATGGAATCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213288.2 |
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| 3UTR GCA 72 bp | TTATTTATAATTGCCAGAAGCTGGAAAGAACCCAGATaGCCCTCAACAGAGAAATGGATACAGAAAATGTGG | + |
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Preference number: 3 (lower is better) Translates to: LFIIARSWKEPR*PSTEKWIQKMW Trigger: CCACATTTTCTGTATCCATTTCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTTCTGGCAATTATAAATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213288.2 |
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| 3UTR TCA 72 bp | ATGCTGACACCATTGCATACACTAGCAAGATTTTGCTaGAAGGACAATGATATAGCTGTCTCTTATGAGACT | + |
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Preference number: 3 (lower is better) Translates to: MLTPLHTLARFC*KDNDIAVSYET Trigger: AGTCTCATAAGAGACAGCTATATCATTGTCCTTTCAGCAAAATCTTGCTAGTGTATGCAATGGTGTCAGCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213288.2 |
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| 3UTR TCA 72 bp | AGTCTTAATTTCATGATAATTGGGTTAAACATGGAGTaGTATGGCTTGCTTCTTACATGGGTTCTGAGAGTC | + |
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Preference number: 3 (lower is better) Translates to: SLNFMIIGLNME*YGLLLTWVLRV Trigger: GACTCTCAGAACCCATGTAAGAAGCAAGCCATATCACTCCATGTTTAACCCAATTATCATGAAATTAAGACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213288.2 |
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| 3UTR TCA 72 bp | CTATTATGTGCTGTGAGACATAAATATCTGTATATATaGGGAGTGGACAGTACTTCTTCCGATACACATGAA | + |
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Preference number: 3 (lower is better) Translates to: LLCAVRHKYLYI*GVDSTSSDTHE Trigger: TTCATGTGTATCGGAAGAAGTACTGTCCACTCCTCATATATACAGATATTTATGTCTCACAGCACATAATAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213288.2 |
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| CDS-3UTR TCA 90 bp | ATTGCCAGAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGAAATGGATACAGAGACTCTCCAGGTCATaGTGGAGGAGTAGTGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: IARSWKEPRCPSTEKWIQRLSRS*WRSSEG Trigger: CCCTTCACTACTCCTCCATCATGACCTGGAGAGTCT...CTGTATCCATTTCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTTCTGGCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213288.2 |
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| CDS-3UTR GCA 90 bp | ATTGCCAGAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGAAATGGATACAGGGGAGAACCCAGCAATaGAGGGCTGTAGATGATGGT | + |
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Preference number: 4 (lower is better) Translates to: IARSWKEPRCPSTEKWIQGRTQQ*RAVDDG Trigger: ACCATCATCTACAGCCCTGCATTGCTGGGTTCTCCC...CTGTATCCATTTCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTTCTGGCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213288.2 |
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| 3UTR CAA 72 bp | GAGGAACACTCCTCCATTGTTAGTGGGATTGCAAGCTaGTACAACCACTCTGGAAATCAGTCTGGCGGTTCC | + |
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Preference number: 4 (lower is better) Translates to: EEHSSIVSGIAS*YNHSGNQSGGS Trigger: GGAACCGCCAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCCACTAACAATGGAGGAGTGTTCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213288.2 |
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| CDS-3UTR CCA 90 bp | ACCTTATCCCTTACCCCCTCACCCTGCTCACCAATACACCCACTCGTCCTTCCTGTATATTCTCAATTTTaGGATTCTGAGAAAGCCCCA | + |
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Preference number: 4 (lower is better) Translates to: TLSLTPSPCSPIHPLVLPVYSQF*DSEKAP Trigger: TGGGGCTTTCTCAGAATCCCAAAATTGAGAATATAC...AGGAAGGACGAGTGGGTGTATTGGTGAGCAGGGTGAGGGGGTAAGGGATAAGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000213288.2 |
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| 3UTR CAA 72 bp | CCACTCTGGAAATCAGTCTGGCGGTTCCTCAGTAAATaGGACATAGTACTACAGGAGGATTCCGCAATACCT | + |
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Preference number: 4 (lower is better) Translates to: PLWKSVWRFLSK*DIVLQEDSAIP Trigger: AGGTATTGCGGAATCCTCCTGTAGTACTATGTCCAATTTACTGAGGAACCGCCAGACTGATTTCCAGAGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213288.2 |
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| CDS-3UTR TCA 90 bp | GTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGTAAATTGGACATAGTAGCACCAGTGAAGAAGTaGAAAGCAAACAGTTGTGTC | + |
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Preference number: 4 (lower is better) Translates to: VQPLWKSVWRFLSKLDIVAPVKK*KANSCV Trigger: GACACAACTGTTTGCTTTTCACTTCTTCACTGGTGC...TACTATGTCCAATTTACTGAGGAACCGCCAGACTGATTTCCAGAGTGGTTGTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213288.2 |
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| CDS-3UTR TCA 90 bp | CATATGTTTTCTTTGATTGGTGGTTTAGTCCCAGGGAGCTCTGAGGTTACTGGTCAGTGCAAGCAAGCTTaGGTAATGGGAATAAGTCAC | + |
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Preference number: 4 (lower is better) Translates to: HMFSLIGGLVPGSSEVTGQCKQA*VMGISH Trigger: GTGACTTATTCCCATTACTCAAGCTTGCTTGCACTG...ACCAGTAACCTCAGAGCTCCCTGGGACTAAACCACCAATCAAAGAAAACATATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213288.2 |
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| CDS-3UTR CCA 90 bp | TATAATTGCCAGAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGAAATGGATTCAAGAAGAAGTACATaGGAGAACCCAGCAATGCAG | + |
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Preference number: 4 (lower is better) Translates to: YNCQKLERTQMPLNREMDSRRST*ENPAMQ Trigger: CTGCATTGCTGGGTTCTCCCATGTACTTCTTCTTGA...ATCCATTTCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTTCTGGCAATTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213288.2 |
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| CDS-3UTR GCA 90 bp | GTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGTAAATTGGACATAGTACAAGACAATGACCTCTaGACCAGTGAAGAAGTGAAA | + |
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Preference number: 4 (lower is better) Translates to: VQPLWKSVWRFLSKLDIVQDNDL*TSEEVK Trigger: TTTCACTTCTTCACTGGTGCAGAGGTCATTGTCTTG...TACTATGTCCAATTTACTGAGGAACCGCCAGACTGATTTCCAGAGTGGTTGTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213288.2 |
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| CDS-3UTR GCA 90 bp | ATTGCCAGAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGAAATGGATACAGCCACAGAACGGTAGCTaGAAAGTAAAGATAATTTGT | + |
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Preference number: 4 (lower is better) Translates to: IARSWKEPRCPSTEKWIQPQNGS*KVKIIC Trigger: ACAAATTATCTTTACTTTGCAGCTACCGTTCTGTGG...CTGTATCCATTTCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTTCTGGCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213288.2 |
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| CDS-3UTR CCA 90 bp | GTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGTAAATTGGACATAGTAAGCCTTCAAAGGAGATaGTCTTCCTCTCATAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: VQPLWKSVWRFLSKLDIVSLQRR*SSSHRR Trigger: TCTTCTATGAGAGGAAGACCATCTCCTTTGAAGGCT...TACTATGTCCAATTTACTGAGGAACCGCCAGACTGATTTCCAGAGTGGTTGTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213288.2 |
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| CDS-3UTR CCA 90 bp | ATTGCCAGAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGAAATGGATACAGCATAGGATTGAGCAGTaGTGTTATGACATTGACAAA | + |
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Preference number: 4 (lower is better) Translates to: IARSWKEPRCPSTEKWIQHRIEQ*CYDIDK Trigger: TTTGTCAATGTCATAACACCACTGCTCAATCCTATG...CTGTATCCATTTCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTTCTGGCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213288.2 |
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| CDS-3UTR GCA 90 bp | GTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGTAAATTGGACATAGTAGCTGTAGATGATGGTTaGTATAATCATCATGTTGCC | + |
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Preference number: 4 (lower is better) Translates to: VQPLWKSVWRFLSKLDIVAVDDG*YNHHVA Trigger: GGCAACATGATGATTATAGCAACCATCATCTACAGC...TACTATGTCCAATTTACTGAGGAACCGCCAGACTGATTTCCAGAGTGGTTGTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213288.2 |
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| CDS-3UTR CCA 90 bp | TATAATTGCCAGAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGAAATGGATACAACAACTGTAATATaGGATCCACAGGTGGAAAGA | + |
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Preference number: 4 (lower is better) Translates to: YNCQKLERTQMPLNREMDTTTVI*DPQVER Trigger: TCTTTCCACCTGTGGATCCCATATTACAGTTGTTGT...ATCCATTTCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTTCTGGCAATTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213288.2 |
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| 3UTR CAA 72 bp | AAACTCAAGAAGAATGATGACCAAATTGTGGGTACTTaGCCCCTTCTTAGAACTGGGAACAAAACACCCATG | + |
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Preference number: 4 (lower is better) Translates to: KLKKNDDQIVGT*PLLRTGNKTPM Trigger: CATGGGTGTTTTGTTCCCAGTTCTAAGAAGGGGCAAAGTACCCACAATTTGGTCATCATTCTTCTTGAGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213288.2 |
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| CDS-3UTR GCA 90 bp | GTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGTAAATTGGACATAGTAGATAGAGCCACTATTTaGAAAGACCAAAAAGACAAA | + |
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Preference number: 4 (lower is better) Translates to: VQPLWKSVWRFLSKLDIVDRATI*KDQKDK Trigger: TTTGTCTTTTTGGTCTTTGCAAATAGTGGCTCTATC...TACTATGTCCAATTTACTGAGGAACCGCCAGACTGATTTCCAGAGTGGTTGTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213288.2 |
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| CDS-3UTR CAA 90 bp | AGTACAGCAGATCCTCTCAGATGGTCAGGATATAGTGTCTTCAGGGGAGCAGATAAGAGTATGAACTCATaGACAATGCTCTGGTTTTCC | + |
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Preference number: 5 (lower is better) Translates to: STADPLRWSGYSVFRGADKSMNS*TMLWFS Trigger: GGAAAACCAGAGCATTGTCAATGAGTTCATACTCTT...ATCTGCTCCCCTGAAGACACTATATCCTGACCATCTGAGAGGATCTGCTGTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213288.2 |
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| CDS-3UTR CAA 90 bp | GTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGTAAATTGGACATAGTATCTTCTGCACATTTTTaGGATGGCATTCTTCATTTC | + |
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Preference number: 5 (lower is better) Translates to: VQPLWKSVWRFLSKLDIVSSAHF*DGILHF Trigger: GAAATGAAGAATGCCATCCAAAAAATGTGCAGAAGA...TACTATGTCCAATTTACTGAGGAACCGCCAGACTGATTTCCAGAGTGGTTGTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213288.2 |
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| CDS-3UTR CAA 90 bp | AGATTCCATCTCACACCAGTCAGAATGGCTAAAATCAAAAATTCAGGTGACAACGTGAAAAGCAAACAGTaGTGTCATGCAGCCTTCAAA | + |
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Preference number: 5 (lower is better) Translates to: RFHLTPVRMAKIKNSGDNVKSKQ*CHAAFK Trigger: TTTGAAGGCTGCATGACACAACTGTTTGCTTTTCAC...GTTGTCACCTGAATTTTTGATTTTAGCCATTCTGACTGGTGTGAGATGGAATCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000213288.2 |
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| CDS TCA 90 bp | ACCAACAGAAATACCACAAAGAGTATATTCTCAATTTTGGGATTCTaGGAAAGCCCCAAGAGTATGAACTCATTGACAATGCTCTGGTTT | + |
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Preference number: 5 (lower is better) Translates to: TNRNTTKSIFSILGF*ESPKSMNSLTMLWF Trigger: AAACCAGAGCATTGTCAATGAGTTCATACTCTTGGGGCTTTCTCAGAATCCCAAAATTGAGAATATACTCTTTGTGGTATTTCTGTTGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099789.5 ENSMUST00000099806.3 ENSMUST00000213288.2 |
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| CDS TCA 72 bp | AATACCACAAAGAGTATATTCTCAATTTTGGGATTCTaGGAAAGCCCCAAGAGTATGAACTCATTGACAATG | + |
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Preference number: 6 (lower is better) Translates to: NTTKSIFSILGF*ESPKSMNSLTM Trigger: CATTGTCAATGAGTTCATACTCTTGGGGCTTTCTCAGAATCCCAAAATTGAGAATATACTCTTTGTGGTATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099789.5 ENSMUST00000099806.3 ENSMUST00000213288.2 |
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