Pregenerated sensors for OLFR122 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000083947Ensembl transcript IDs: ENSMUST00000119082.2, ENSMUST00000172582.5, ENSMUST00000217119.2
Found 53 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | TCCTTTAAGGCAGCCAGGAAGAGCACAGCAATTTTGTTTGCTTACTaGGACAGACTGTGCACCCTTTCAGGAGCACTTCAGGATCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: SFKAARKSTAILFAY*DRLCTLSGALQDPQ Trigger: CTGAGGATCCTGAAGTGCTCCTGAAAGGGTGCACAGTCTGTCCAAGTAAGCAAACAAAATTGCTGTGCTCTTCCTGGCTGCCTTAAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172582.5 ENSMUST00000217119.2 |
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| 3UTR CAA 90 bp | TTAAAGGTTCCTTTAAGGCAGCCAGGAAGAGCACAGCAATTTTGTTaGCTTACTTGGACAGACTGTGCACCCTTTCAGGAGCACTTCAGG | + |
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Preference number: 2 (lower is better) Translates to: LKVPLRQPGRAQQFC*LTWTDCAPFQEHFR Trigger: CCTGAAGTGCTCCTGAAAGGGTGCACAGTCTGTCCAAGTAAGCAAACAAAATTGCTGTGCTCTTCCTGGCTGCCTTAAAGGAACCTTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172582.5 ENSMUST00000217119.2 |
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| 3UTR CAA 90 bp | TTTATTAAAGGTTCCTTTAAGGCAGCCAGGAAGAGCACAGCAATTTaGTTTGCTTACTTGGACAGACTGTGCACCCTTTCAGGAGCACTT | + |
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Preference number: 2 (lower is better) Translates to: FIKGSFKAARKSTAI*FAYLDRLCTLSGAL Trigger: AAGTGCTCCTGAAAGGGTGCACAGTCTGTCCAAGTAAGCAAACAAAATTGCTGTGCTCTTCCTGGCTGCCTTAAAGGAACCTTTAATAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172582.5 ENSMUST00000217119.2 |
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| 3UTR CAA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTTTATCTGAAACTATGATGTaGAAGATCAACTGGCTGGAATTCTTTTACTCTACCCTGCTAGAA | + |
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Preference number: 2 (lower is better) Translates to: CVCVCVCVCLSETMM*KINWLEFFYSTLLE Trigger: TTCTAGCAGGGTAGAGTAAAAGAATTCCAGCCAGTTGATCTTCAACATCATAGTTTCAGATAAACACACACACACACACACACACACACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217119.2 |
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| 3UTR CCA 72 bp | CAGCCAGGAAGAGCACAGCAATTTTGTTTGCTTACTTaGACAGACTGTGCACCCTTTCAGGAGCACTTCAGG | + |
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Preference number: 3 (lower is better) Translates to: QPGRAQQFCLLT*TDCAPFQEHFR Trigger: CCTGAAGTGCTCCTGAAAGGGTGCACAGTCTGTCCAAGTAAGCAAACAAAATTGCTGTGCTCTTCCTGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172582.5 ENSMUST00000217119.2 |
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| 3UTR TCA 72 bp | ATGGTACACAGAACAGAGGCTAACAATTATCTGCCCTaGGAACTACTTAGCTGTTCCAGTCCAATACAAAGG | + |
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Preference number: 3 (lower is better) Translates to: MVHRTEANNYLP*ELLSCSSPIQR Trigger: CCTTTGTATTGGACTGGAACAGCTAAGTAGTTCTCAGGGCAGATAATTGTTAGCCTCTGTTCTGTGTACCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217119.2 |
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| 3UTR TCA 72 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTATCTaGAACTATGATGTTGAAGATCAACTGGCTGGAATT | + |
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Preference number: 3 (lower is better) Translates to: CVCVCVCVCVFI*NYDVEDQLAGI Trigger: AATTCCAGCCAGTTGATCTTCAACATCATAGTTTCAGATAAACACACACACACACACACACACACACACACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217119.2 |
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| 3UTR CCA 72 bp | GTGTGTTTATCTGAAACTATGATGTTGAAGATCAACTaGCTGGAATTCTTTTACTCTACCCTGCTAGAAATC | + |
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Preference number: 3 (lower is better) Translates to: VCLSETMMLKIN*LEFFYSTLLEI Trigger: GATTTCTAGCAGGGTAGAGTAAAAGAATTCCAGCCAGTTGATCTTCAACATCATAGTTTCAGATAAACACAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217119.2 |
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| 3UTR CAA 72 bp | GCAGCCAGGAAGAGCACAGCAATTTTGTTTGCTTACTaGGACAGACTGTGCACCCTTTCAGGAGCACTTCAG | + |
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Preference number: 4 (lower is better) Translates to: AARKSTAILFAY*DRLCTLSGALQ Trigger: CTGAAGTGCTCCTGAAAGGGTGCACAGTCTGTCCAAGTAAGCAAACAAAATTGCTGTGCTCTTCCTGGCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172582.5 ENSMUST00000217119.2 |
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| CDS-3UTR TCA 90 bp | GTTTGCTTACTTGGACAGACTGTGCACCCTTTCAGGAGCACTTCAGGATCCTCAGTAACATCTTGGGTATaGCAGAGCAAGTGTAGCCGA | + |
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Preference number: 4 (lower is better) Translates to: VCLLGQTVHPFRSTSGSSVTSWV*QSKCSR Trigger: TCGGCTACACTTGCTCTGTCATACCCAAGATGTTAC...TGAGGATCCTGAAGTGCTCCTGAAAGGGTGCACAGTCTGTCCAAGTAAGCAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172582.5 ENSMUST00000217119.2 |
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| CDS-3UTR TCA 90 bp | GCAGCCAGGAAGAGCACAGCAATTTTGTTTGCTTACTTGGACAGACTGTGCACCTCCACTTCTGGTGAGTaGTCAGATTTGGGCCTCAAA | + |
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Preference number: 4 (lower is better) Translates to: AARKSTAILFAYLDRLCTSTSGE*SDLGLK Trigger: TTTGAGGCCCAAATCTGATCACTCACCAGAAGTGGA...GGTGCACAGTCTGTCCAAGTAAGCAAACAAAATTGCTGTGCTCTTCCTGGCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172582.5 ENSMUST00000217119.2 |
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| CDS-3UTR CCA 90 bp | GTTTGCTTACTTGGACAGACTGTGCACCCTTTCAGGAGCACTTCAGGATCCTCAAGAAAAACATCTGTGTaGCACACCCTTCCCGTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VCLLGQTVHPFRSTSGSSRKTSV*HTLPVR Trigger: TCTCACGGGAAGGGTGTGCCACACAGATGTTTTTCT...TGAGGATCCTGAAGTGCTCCTGAAAGGGTGCACAGTCTGTCCAAGTAAGCAAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000172582.5 ENSMUST00000217119.2 |
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| CDS-3UTR CCA 90 bp | GCACAGCAATTTTGTTTGCTTACTTGGACAGACTGTGCACCCTTTCAGGAGCACAGCGGTCAAAAGCCATaGCTGCCAATAGACAGCACT | + |
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Preference number: 4 (lower is better) Translates to: AQQFCLLTWTDCAPFQEHSGQKP*LPIDST Trigger: AGTGCTGTCTATTGGCAGCCATGGCTTTTGACCGCT...GTGCTCCTGAAAGGGTGCACAGTCTGTCCAAGTAAGCAAACAAAATTGCTGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172582.5 ENSMUST00000217119.2 |
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| CDS-3UTR CCA 90 bp | GTTTGCTTACTTGGACAGACTGTGCACCCTTTCAGGAGCACTTCAGGATCCTCATTCCCCATGAAACTATaGCCAAATGGGCACATACCC | + |
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Preference number: 4 (lower is better) Translates to: VCLLGQTVHPFRSTSGSSFPMKL*PNGHIP Trigger: GGGTATGTGCCCATTTGGCCATAGTTTCATGGGGAA...TGAGGATCCTGAAGTGCTCCTGAAAGGGTGCACAGTCTGTCCAAGTAAGCAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172582.5 ENSMUST00000217119.2 |
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| 3UTR CAA 72 bp | CCTTTAAGGCAGCCAGGAAGAGCACAGCAATTTTGTTaGCTTACTTGGACAGACTGTGCACCCTTTCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: PLRQPGRAQQFC*LTWTDCAPFQE Trigger: CTCCTGAAAGGGTGCACAGTCTGTCCAAGTAAGCAAACAAAATTGCTGTGCTCTTCCTGGCTGCCTTAAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172582.5 ENSMUST00000217119.2 |
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| CDS-3UTR CCA 90 bp | CACAGCAATTTTGTTTGCTTACTTGGACAGACTGTGCACCCTTTCAGGAGCACTAGCGGTCAAAAGCCATaGCTGCCAATAGACAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: HSNFVCLLGQTVHPFRSTSGQKP*LPIDST Trigger: AGTGCTGTCTATTGGCAGCCATGGCTTTTGACCGCT...AGTGCTCCTGAAAGGGTGCACAGTCTGTCCAAGTAAGCAAACAAAATTGCTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172582.5 ENSMUST00000217119.2 |
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| CDS-3UTR CCA 90 bp | GCAGCCAGGAAGAGCACAGCAATTTTGTTTGCTTACTTGGACAGACTGTGCACCATTGCAGCCTCATTTTaGGATGTATCTCCACAGGCA | + |
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Preference number: 4 (lower is better) Translates to: AARKSTAILFAYLDRLCTIAASF*DVSPQA Trigger: TGCCTGTGGAGATACATCCCAAAATGAGGCTGCAAT...GGTGCACAGTCTGTCCAAGTAAGCAAACAAAATTGCTGTGCTCTTCCTGGCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172582.5 ENSMUST00000217119.2 |
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| CDS-3UTR CCA 90 bp | CACAGCAATTTTGTTTGCTTACTTGGACAGACTGTGCACCCTTTCAGGAGCACTGATGGGAAGAACAGATaGAGAGAGCTTTATGGCGCC | + |
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Preference number: 4 (lower is better) Translates to: HSNFVCLLGQTVHPFRSTDGKNR*RELYGA Trigger: GGCGCCATAAAGCTCTCTCCATCTGTTCTTCCCATC...AGTGCTCCTGAAAGGGTGCACAGTCTGTCCAAGTAAGCAAACAAAATTGCTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172582.5 ENSMUST00000217119.2 |
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| CDS-3UTR TCA 90 bp | CACAGCAATTTTGTTTGCTTACTTGGACAGACTGTGCACCCTTTCAGGAGCACTAGATGGCAAGGGCTATaGGTGAATTTCCTGTCAGTG | + |
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Preference number: 4 (lower is better) Translates to: HSNFVCLLGQTVHPFRSTRWQGL*VNFLSV Trigger: CACTGACAGGAAATTCACTCATAGCCCTTGCCATCT...AGTGCTCCTGAAAGGGTGCACAGTCTGTCCAAGTAAGCAAACAAAATTGCTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172582.5 ENSMUST00000217119.2 |
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| CDS-3UTR TCA 90 bp | TTAAGGCAGCCAGGAAGAGCACAGCAATTTTGTTTGCTTACTTGGACAGACTGTACATCCCATTCCCCATaGAACTATGGCCAAATGGGC | + |
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Preference number: 4 (lower is better) Translates to: LRQPGRAQQFCLLTWTDCTSHSP*NYGQMG Trigger: GCCCATTTGGCCATAGTTTCATGGGGAATGGGATGT...ACAGTCTGTCCAAGTAAGCAAACAAAATTGCTGTGCTCTTCCTGGCTGCCTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172582.5 ENSMUST00000217119.2 |
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| CDS-3UTR GCA 90 bp | GCACAGCAATTTTGTTTGCTTACTTGGACAGACTGTGCACCCTTTCAGGAGCACTGCCGCCACAAAAATTaGAGCCTCATTTTGGGATGT | + |
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Preference number: 4 (lower is better) Translates to: AQQFCLLTWTDCAPFQEHCRHKN*SLILGC Trigger: ACATCCCAAAATGAGGCTGCAATTTTTGTGGCGGCA...GTGCTCCTGAAAGGGTGCACAGTCTGTCCAAGTAAGCAAACAAAATTGCTGTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000172582.5 ENSMUST00000217119.2 |
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| CDS-3UTR GCA 90 bp | GCAGCCAGGAAGAGCACAGCAATTTTGTTTGCTTACTTGGACAGACTGTGCACCGGGCATTACCAGCACTaGAATCAGAATTCTGACATA | + |
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Preference number: 4 (lower is better) Translates to: AARKSTAILFAYLDRLCTGHYQH*NQNSDI Trigger: TATGTCAGAATTCTGATTGCAGTGCTGGTAATGCCC...GGTGCACAGTCTGTCCAAGTAAGCAAACAAAATTGCTGTGCTCTTCCTGGCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172582.5 ENSMUST00000217119.2 |
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| CDS-3UTR CCA 90 bp | TTAAGGCAGCCAGGAAGAGCACAGCAATTTTGTTTGCTTACTTGGACAGACTGTGATGGGAAGAACAGATaGAGAGAGCTTTATGGCGCC | + |
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Preference number: 4 (lower is better) Translates to: LRQPGRAQQFCLLTWTDCDGKNR*RELYGA Trigger: GGCGCCATAAAGCTCTCTCCATCTGTTCTTCCCATC...ACAGTCTGTCCAAGTAAGCAAACAAAATTGCTGTGCTCTTCCTGGCTGCCTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172582.5 ENSMUST00000217119.2 |
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| CDS-3UTR CCA 90 bp | GCAGCCAGGAAGAGCACAGCAATTTTGTTTGCTTACTTGGACAGACTGTGCACCGTGACTACAAGTAGATaGGAAGAACAGATGGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: AARKSTAILFAYLDRLCTVTTSR*EEQMER Trigger: TCTCTCCATCTGTTCTTCCCATCTACTTGTAGTCAC...GGTGCACAGTCTGTCCAAGTAAGCAAACAAAATTGCTGTGCTCTTCCTGGCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172582.5 ENSMUST00000217119.2 |
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| 3UTR CAA 72 bp | GGTTCCTTTAAGGCAGCCAGGAAGAGCACAGCAATTTaGTTTGCTTACTTGGACAGACTGTGCACCCTTTCA | + |
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Preference number: 4 (lower is better) Translates to: GSFKAARKSTAI*FAYLDRLCTLS Trigger: TGAAAGGGTGCACAGTCTGTCCAAGTAAGCAAACAAAATTGCTGTGCTCTTCCTGGCTGCCTTAAAGGAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172582.5 ENSMUST00000217119.2 |
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| CDS-3UTR TCA 90 bp | GAACAGAGGCTAACAATTATCTGCCCTGAGAACTACTTAGCTGTTCCAGTCCAATCCACTTCTGGTGAGTaGTCAGATTTGGGCCTCAAA | + |
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Preference number: 4 (lower is better) Translates to: EQRLTIICPENYLAVPVQSTSGE*SDLGLK Trigger: TTTGAGGCCCAAATCTGATCACTCACCAGAAGTGGA...TTGGACTGGAACAGCTAAGTAGTTCTCAGGGCAGATAATTGTTAGCCTCTGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217119.2 |
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| CDS-3UTR CCA 90 bp | AGGAAGAGCACAGCAATTTTGTTTGCTTACTTGGACAGACTGTGCACCCTTTCAAGAAAAACATCTGTGTaGCACACCCTTCCCGTGAGA | + |
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Preference number: 4 (lower is better) Translates to: RKSTAILFAYLDRLCTLSRKTSV*HTLPVR Trigger: TCTCACGGGAAGGGTGTGCCACACAGATGTTTTTCT...TGAAAGGGTGCACAGTCTGTCCAAGTAAGCAAACAAAATTGCTGTGCTCTTCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000172582.5 ENSMUST00000217119.2 |
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| CDS-3UTR CCA 90 bp | TTAAGGCAGCCAGGAAGAGCACAGCAATTTTGTTTGCTTACTTGGACAGACTGTGTGAGTGATCAGATTTaGGCCTCAAATAGGTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: LRQPGRAQQFCLLTWTDCVSDQI*ASNRWQ Trigger: CTGCCACCTATTTGAGGCCCAAATCTGATCACTCAC...ACAGTCTGTCCAAGTAAGCAAACAAAATTGCTGTGCTCTTCCTGGCTGCCTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172582.5 ENSMUST00000217119.2 |
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| CDS-3UTR TCA 90 bp | GGAAGAGAAACTATTCCTGTGCCAATAATTCTAGGACTAGTGTGTCCAAAGCCTGTAACATCTTGGGTATaGCAGAGCAAGTGTAGCCGA | + |
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Preference number: 4 (lower is better) Translates to: GRETIPVPIILGLVCPKPVTSWV*QSKCSR Trigger: TCGGCTACACTTGCTCTGTCATACCCAAGATGTTAC...AGGCTTTGGACACACTAGTCCTAGAATTATTGGCACAGGAATAGTTTCTCTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217119.2 |
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| CDS-3UTR GCA 90 bp | GGCCGGACAATGGCTGAGAATGCATACAGAGAATTTTTAAGGCTCCTGAGATATTGCCGCCACAAAAATTaGAGCCTCATTTTGGGATGT | + |
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Preference number: 4 (lower is better) Translates to: GRTMAENAYREFLRLLRYCRHKN*SLILGC Trigger: ACATCCCAAAATGAGGCTGCAATTTTTGTGGCGGCA...ATATCTCAGGAGCCTTAAAAATTCTCTGTATGCATTCTCAGCCATTGTCCGGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000172582.5 ENSMUST00000217119.2 |
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| CDS-3UTR CCA 90 bp | AGGAAGAGCACAGCAATTTTGTTTGCTTACTTGGACAGACTGTGCACCCTTTCAATTGCAGCCTCATTTTaGGATGTATCTCCACAGGCA | + |
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Preference number: 4 (lower is better) Translates to: RKSTAILFAYLDRLCTLSIAASF*DVSPQA Trigger: TGCCTGTGGAGATACATCCCAAAATGAGGCTGCAAT...TGAAAGGGTGCACAGTCTGTCCAAGTAAGCAAACAAAATTGCTGTGCTCTTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172582.5 ENSMUST00000217119.2 |
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| CDS-3UTR GCA 90 bp | GGCCGGACAATGGCTGAGAATGCATACAGAGAATTTTTAAGGCTCCTGAGATATGGGCATTACCAGCACTaGAATCAGAATTCTGACATA | + |
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Preference number: 4 (lower is better) Translates to: GRTMAENAYREFLRLLRYGHYQH*NQNSDI Trigger: TATGTCAGAATTCTGATTGCAGTGCTGGTAATGCCC...ATATCTCAGGAGCCTTAAAAATTCTCTGTATGCATTCTCAGCCATTGTCCGGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000172582.5 ENSMUST00000217119.2 |
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| CDS-3UTR CCA 90 bp | TTATTAAAGGTTCCTTTAAGGCAGCCAGGAAGAGCACAGCAATTTTGTTTGCTTGTGAGTGATCAGATTTaGGCCTCAAATAGGTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: LLKVPLRQPGRAQQFCLLVSDQI*ASNRWQ Trigger: CTGCCACCTATTTGAGGCCCAAATCTGATCACTCAC...AAGCAAACAAAATTGCTGTGCTCTTCCTGGCTGCCTTAAAGGAACCTTTAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172582.5 ENSMUST00000217119.2 |
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| CDS-3UTR TCA 90 bp | ATGTTGAAGATCAACTGGCTGGAATTCTTTTACTCTACCCTGCTAGAAATCATAAGATGGCAAGGGCTATaGGTGAATTTCCTGTCAGTG | + |
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Preference number: 4 (lower is better) Translates to: MLKINWLEFFYSTLLEIIRWQGL*VNFLSV Trigger: CACTGACAGGAAATTCACTCATAGCCCTTGCCATCT...TATGATTTCTAGCAGGGTAGAGTAAAAGAATTCCAGCCAGTTGATCTTCAACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217119.2 |
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| CDS-3UTR CCA 90 bp | ATGTTGAAGATCAACTGGCTGGAATTCTTTTACTCTACCCTGCTAGAAATCATAGTGACTACAAGTAGATaGGAAGAACAGATGGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: MLKINWLEFFYSTLLEIIVTTSR*EEQMER Trigger: TCTCTCCATCTGTTCTTCCCATCTACTTGTAGTCAC...TATGATTTCTAGCAGGGTAGAGTAAAAGAATTCCAGCCAGTTGATCTTCAACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217119.2 |
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| 3UTR CAA 72 bp | GTGTGTGTGTGTGTGTGTTTATCTGAAACTATGATGTaGAAGATCAACTGGCTGGAATTCTTTTACTCTACC | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCLSETMM*KINWLEFFYST Trigger: GGTAGAGTAAAAGAATTCCAGCCAGTTGATCTTCAACATCATAGTTTCAGATAAACACACACACACACACAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217119.2 |
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| CDS-3UTR CAA 90 bp | GTTTGCTTACTTGGACAGACTGTGCACCCTTTCAGGAGCACTTCAGGATCCTCACACGACTCATTCGTGTaGCATAGTGGAGTGGGGAGC | + |
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Preference number: 5 (lower is better) Translates to: VCLLGQTVHPFRSTSGSSHDSFV*HSGVGS Trigger: GCTCCCCACTCCACTATGCAACACGAATGAGTCGTG...TGAGGATCCTGAAGTGCTCCTGAAAGGGTGCACAGTCTGTCCAAGTAAGCAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172582.5 ENSMUST00000217119.2 |
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| CDS CCA 90 bp | AGTGTGACTACAAGTAGATGGGAAGAACAGATGGAGAGAGCTTTATaGCGCCCCTCACGTGAGGGCATTACCAGCACTGCAATCAGAATT | + |
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Preference number: 5 (lower is better) Translates to: SVTTSRWEEQMERAL*RPSREGITSTAIRI Trigger: AATTCTGATTGCAGTGCTGGTAATGCCCTCACGTGAGGGGCGCCATAAAGCTCTCTCCATCTGTTCTTCCCATCTACTTGTAGTCACACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000119082.2 ENSMUST00000172582.5 ENSMUST00000217119.2 |
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| CDS-3UTR CAA 90 bp | GGCCGGACAATGGCTGAGAATGCATACAGAGAATTTTTAAGGCTCCTGAGATATCACGACTCATTCGTGTaGCATAGTGGAGTGGGGAGC | + |
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Preference number: 5 (lower is better) Translates to: GRTMAENAYREFLRLLRYHDSFV*HSGVGS Trigger: GCTCCCCACTCCACTATGCAACACGAATGAGTCGTG...ATATCTCAGGAGCCTTAAAAATTCTCTGTATGCATTCTCAGCCATTGTCCGGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000172582.5 ENSMUST00000217119.2 |
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| CDS-3UTR CAA 90 bp | CACAGCAATTTTGTTTGCTTACTTGGACAGACTGTGCACCCTTTCAGGAGCACTAACGAGAAAATAAAATaGGTCTGTCCCAACCCTACT | + |
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Preference number: 5 (lower is better) Translates to: HSNFVCLLGQTVHPFRSTNEKIK*VCPNPT Trigger: AGTAGGGTTGGGACAGACCAATTTTATTTTCTCGTT...AGTGCTCCTGAAAGGGTGCACAGTCTGTCCAAGTAAGCAAACAAAATTGCTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000172582.5 ENSMUST00000217119.2 |
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| CDS-3UTR CAA 90 bp | GGCCGGACAATGGCTGAGAATGCATACAGAGAATTTTTAAGGCTCCTGAGATATAACGAGAAAATAAAATaGGTCTGTCCCAACCCTACT | + |
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Preference number: 5 (lower is better) Translates to: GRTMAENAYREFLRLLRYNEKIK*VCPNPT Trigger: AGTAGGGTTGGGACAGACCAATTTTATTTTCTCGTT...ATATCTCAGGAGCCTTAAAAATTCTCTGTATGCATTCTCAGCCATTGTCCGGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000172582.5 ENSMUST00000217119.2 |
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| CDS CCA 90 bp | CACTGCAATCAGAATTCTGACATAGGAAGAAATAATCAGCAAAAATaGACTAAATATGCAGAGGACTGCCGCCACAAAAATTGCAGCCTC | + |
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Preference number: 5 (lower is better) Translates to: HCNQNSDIGRNNQQK*TKYAEDCRHKNCSL Trigger: GAGGCTGCAATTTTTGTGGCGGCAGTCCTCTGCATATTTAGTCCATTTTTGCTGATTATTTCTTCCTATGTCAGAATTCTGATTGCAGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000119082.2 ENSMUST00000172582.5 ENSMUST00000217119.2 |
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| CDS GCA 72 bp | GGCCAAATGGGCACATACCCCACGACTCATTCGTGTTaGATAGTGGAGTGGGGAGCATATGGCCATGTAGCG | + |
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Preference number: 6 (lower is better) Translates to: GQMGTYPTTHSC*IVEWGAYGHVA Trigger: CGCTACATGGCCATATGCTCCCCACTCCACTATGCAACACGAATGAGTCGTGGGGTATGTGCCCATTTGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000119082.2 ENSMUST00000172582.5 ENSMUST00000217119.2 |
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| CDS CAA 72 bp | TGGCCAAATGGGCACATACCCCACGACTCATTCGTGTaGCATAGTGGAGTGGGGAGCATATGGCCATGTAGC | + |
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Preference number: 6 (lower is better) Translates to: WPNGHIPHDSFV*HSGVGSIWPCS Trigger: GCTACATGGCCATATGCTCCCCACTCCACTATGCAACACGAATGAGTCGTGGGGTATGTGCCCATTTGGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000119082.2 ENSMUST00000172582.5 ENSMUST00000217119.2 |
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| CDS CCA 72 bp | CAGAGGACTGCCGCCACAAAAATTGCAGCCTCATTTTaGGATGTATCTCCACAGGCAAGTGCCAGGACAGGT | + |
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Preference number: 6 (lower is better) Translates to: QRTAATKIAASF*DVSPQASARTG Trigger: ACCTGTCCTGGCACTTGCCTGTGGAGATACATCCCAAAATGAGGCTGCAATTTTTGTGGCGGCAGTCCTCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000119082.2 ENSMUST00000172582.5 ENSMUST00000217119.2 |
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| CDS CAA 72 bp | CCAGGGACCTCAGAGAACTTGGCAAATGCAAAGCGTTaGACAGACAAGCTGTTCTCCTGCCACAGAGAGCAG | + |
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Preference number: 6 (lower is better) Translates to: PGTSENLANAKR*TDKLFSCHREQ Trigger: CTGCTCTCTGTGGCAGGAGAACAGCTTGTCTGTCAAACGCTTTGCATTTGCCAAGTTCTCTGAGGTCCCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119082.2 ENSMUST00000172582.5 ENSMUST00000217119.2 |
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| CDS CAA 90 bp | ATGAGGGTGAACAGGAGGAAGCATTCTCCAGGGACCTCAGAGAACTaGGCAAATGCAAAGCGTTTGACAGACAAGCTGTTCTCCTGCCAC | + |
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Preference number: 6 (lower is better) Translates to: MRVNRRKHSPGTSEN*ANAKRLTDKLFSCH Trigger: GTGGCAGGAGAACAGCTTGTCTGTCAAACGCTTTGCATTTGCCAAGTTCTCTGAGGTCCCTGGAGAATGCTTCCTCCTGTTCACCCTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119082.2 ENSMUST00000172582.5 ENSMUST00000217119.2 |
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| CDS TCA 72 bp | CAGGGACCTCAGAGAACTTGGCAAATGCAAAGCGTTTaGCAGACAAGCTGTTCTCCTGCCACAGAGAGCAGT | + |
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Preference number: 6 (lower is better) Translates to: QGPQRTWQMQSV*QTSCSPATESS Trigger: ACTGCTCTCTGTGGCAGGAGAACAGCTTGTCTGTCAAACGCTTTGCATTTGCCAAGTTCTCTGAGGTCCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119082.2 ENSMUST00000172582.5 ENSMUST00000217119.2 |
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| CDS TCA 72 bp | GGTCTGTCCCAACCCTACTATACATCCCATTCCCCATaGAACTATGGCCAAATGGGCACATACCCCACGACT | + |
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Preference number: 6 (lower is better) Translates to: GLSQPYYTSHSP*NYGQMGTYPTT Trigger: AGTCGTGGGGTATGTGCCCATTTGGCCATAGTTTCATGGGGAATGGGATGTATAGTAGGGTTGGGACAGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000119082.2 ENSMUST00000172582.5 ENSMUST00000217119.2 |
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| CDS TCA 72 bp | AGAACAGATGGAGAGAGCTTTATGGCGCCCCTCACGTaGGGGCATTACCAGCACTGCAATCAGAATTCTGAC | + |
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Preference number: 6 (lower is better) Translates to: RTDGESFMAPLT*GHYQHCNQNSD Trigger: GTCAGAATTCTGATTGCAGTGCTGGTAATGCCCTCACGTGAGGGGCGCCATAAAGCTCTCTCCATCTGTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000119082.2 ENSMUST00000172582.5 ENSMUST00000217119.2 |
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| CDS CCA 72 bp | CCAACCCTACTATACATCCCATTCCCCATGAAACTATaGCCAAATGGGCACATACCCCACGACTCATTCGTG | + |
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Preference number: 6 (lower is better) Translates to: PTLLYIPFPMKL*PNGHIPHDSFV Trigger: CACGAATGAGTCGTGGGGTATGTGCCCATTTGGCCATAGTTTCATGGGGAATGGGATGTATAGTAGGGTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000119082.2 ENSMUST00000172582.5 ENSMUST00000217119.2 |
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| CDS GCA 72 bp | TGGACTAAATATGCAGAGGACTGCCGCCACAAAAATTaGAGCCTCATTTTGGGATGTATCTCCACAGGCAAG | + |
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Preference number: 6 (lower is better) Translates to: WTKYAEDCRHKN*SLILGCISTGK Trigger: CTTGCCTGTGGAGATACATCCCAAAATGAGGCTGCAATTTTTGTGGCGGCAGTCCTCTGCATATTTAGTCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000119082.2 ENSMUST00000172582.5 ENSMUST00000217119.2 |
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| CDS TCA 72 bp | TCAAATAGGTGGCAGACGTTGAGCCATAGAAGAGTGTaGCTACAAGTAGATGGGAAGAACAGATGGAGAGAG | + |
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Preference number: 6 (lower is better) Translates to: SNRWQTLSHRRV*LQVDGKNRWRE Trigger: CTCTCTCCATCTGTTCTTCCCATCTACTTGTAGTCACACTCTTCTATGGCTCAACGTCTGCCACCTATTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119082.2 ENSMUST00000172582.5 ENSMUST00000217119.2 |
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