Pregenerated sensors for OLFR1219 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075104Ensembl transcript IDs: ENSMUST00000099797.2, ENSMUST00000213724.2, ENSMUST00000214442.2, ENSMUST00000215225.3, ENSMUST00000217421.2
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTCGAAGTTCGGTGCTGAGACAGAAGGAAAGACCATCCAGAGACTaGCCCACCCGGGATACATCCCATATACAACCACCAAACCCAGAC | + |
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Preference number: 1 (lower is better) Translates to: PRSSVLRQKERPSRD*PTRDTSHIQPPNPD Trigger: GTCTGGGTTTGGTGGTTGTATATGGGATGTATCCCGGGTGGGGCAGTCTCTGGATGGTCTTTCCTTCTGTCTCAGCACCGAACTTCGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000213724.2 ENSMUST00000214442.2 ENSMUST00000215225.3 ENSMUST00000217421.2 |
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| 3UTR TCA 90 bp | GAATCTGTTTCTGCATATATTGGGTCTGCAAAGTTTCAAGAAAGATaGGTTCTCAGTACAGGGAAGTGGAATAGACATGAGTGTCCATCT | + |
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Preference number: 1 (lower is better) Translates to: ESVSAYIGSAKFQER*VLSTGKWNRHECPS Trigger: AGATGGACACTCATGTCTATTCCACTTCCCTGTACTGAGAACTCATCTTTCTTGAAACTTTGCAGACCCAATATATGCAGAAACAGATTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000213724.2 ENSMUST00000214442.2 ENSMUST00000215225.3 ENSMUST00000217421.2 |
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| 3UTR-3UTR TCA 90 bp | TCACACTTAAAGACAGGCCACATACCCAGCTGTAATGGCCAAAACAAAAATGAAGGCCTCTGCTCCCATTaGTGGCCGTCAAGGCCATCC | + |
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Preference number: 2 (lower is better) Translates to: SHLKTGHIPSCNGQNKNEGLCSH*WPSRPS Trigger: GGATGGCCTTGACGGCCATCAATGGGAGCAGAGGCC...TTCATTTTTGTTTTGGCCATTACAGCTGGGTATGTGGCCTGTCTTTAAGTGTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000213724.2 ENSMUST00000214442.2 ENSMUST00000215225.3 ENSMUST00000217421.2 |
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| 3UTR-3UTR TCA 90 bp | TATTGGGTCTGCAAAGTTTCAAGAAAGATGAGTTCTCAGTACAGGGAAGTGGAAGGCCTCTGCTCCCATTaGTGGCCGTCAAGGCCATCC | + |
|
Preference number: 2 (lower is better) Translates to: YWVCKVSRKMSSQYREVEGLCSH*WPSRPS Trigger: GGATGGCCTTGACGGCCATCAATGGGAGCAGAGGCC...TTCCACTTCCCTGTACTGAGAACTCATCTTTCTTGAAACTTTGCAGACCCAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000213724.2 ENSMUST00000214442.2 ENSMUST00000215225.3 ENSMUST00000217421.2 |
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| 3UTR-3UTR TCA 90 bp | GTTGTTCCTCGAAGTTCGGTGCTGAGACAGAAGGAAAGACCATCCAGAGACTGCAGAATAAATCTCCACTaGACCTGTGTACTAGCATTG | + |
|
Preference number: 2 (lower is better) Translates to: VVPRSSVLRQKERPSRDCRINLH*TCVLAL Trigger: CAATGCTAGTACACAGGTTCAGTGGAGATTTATTCT...GCAGTCTCTGGATGGTCTTTCCTTCTGTCTCAGCACCGAACTTCGAGGAACAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000213724.2 ENSMUST00000214442.2 ENSMUST00000215225.3 ENSMUST00000217421.2 |
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| 3UTR-3UTR TCA 90 bp | TCACACTTAAAGACAGGCCACATACCCAGCTGTAATGGCCAAAACAAAAATGAACTCGAAGTTCGGTGCTaGGACAGAAGGAAAGACCAT | + |
|
Preference number: 2 (lower is better) Translates to: SHLKTGHIPSCNGQNKNELEVRC*DRRKDH Trigger: ATGGTCTTTCCTTCTGTCTCAGCACCGAACTTCGAG...TTCATTTTTGTTTTGGCCATTACAGCTGGGTATGTGGCCTGTCTTTAAGTGTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000213724.2 ENSMUST00000214442.2 ENSMUST00000215225.3 ENSMUST00000217421.2 |
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| 3UTR-3UTR TCA 90 bp | TCACACTTAAAGACAGGCCACATACCCAGCTGTAATGGCCAAAACAAAAATGAACCAGCAAGATTTTGCTaGCAGGACTCTGGCAAATCT | + |
|
Preference number: 2 (lower is better) Translates to: SHLKTGHIPSCNGQNKNEPARFC*QDSGKS Trigger: AGATTTGCCAGAGTCCTGTCAGCAAAATCTTGCTGG...TTCATTTTTGTTTTGGCCATTACAGCTGGGTATGTGGCCTGTCTTTAAGTGTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000213724.2 ENSMUST00000214442.2 ENSMUST00000215225.3 ENSMUST00000217421.2 |
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| 3UTR-3UTR TCA 90 bp | TATTGGGTCTGCAAAGTTTCAAGAAAGATGAGTTCTCAGTACAGGGAAGTGGAACCAGCAAGATTTTGCTaGCAGGACTCTGGCAAATCT | + |
|
Preference number: 2 (lower is better) Translates to: YWVCKVSRKMSSQYREVEPARFC*QDSGKS Trigger: AGATTTGCCAGAGTCCTGTCAGCAAAATCTTGCTGG...TTCCACTTCCCTGTACTGAGAACTCATCTTTCTTGAAACTTTGCAGACCCAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000213724.2 ENSMUST00000214442.2 ENSMUST00000215225.3 ENSMUST00000217421.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGTTAGATCATATTGTTGTTCCTCGAAGTTCGGTGCTGAGACAGAAGGAAAGAGAATAAATCTCCACTaGACCTGTGTACTAGCATTG | + |
|
Preference number: 2 (lower is better) Translates to: LVRSYCCSSKFGAETEGKRINLH*TCVLAL Trigger: CAATGCTAGTACACAGGTTCAGTGGAGATTTATTCT...CTTTCCTTCTGTCTCAGCACCGAACTTCGAGGAACAACAATATGATCTAACCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000213724.2 ENSMUST00000214442.2 ENSMUST00000215225.3 ENSMUST00000217421.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGTTAGATCATATTGTTGTTCCTCGAAGTTCGGTGCTGAGACAGAAGGAAAGCATGTGAAGGATAGGTaGTATTTCTGCCTGTTAACA | + |
|
Preference number: 2 (lower is better) Translates to: LVRSYCCSSKFGAETEGKHVKDR*YFCLLT Trigger: TGTTAACAGGCAGAAATATCACCTATCCTTCACATG...CTTTCCTTCTGTCTCAGCACCGAACTTCGAGGAACAACAATATGATCTAACCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000213724.2 ENSMUST00000214442.2 ENSMUST00000215225.3 ENSMUST00000217421.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGTTAGATCATATTGTTGTTCCTCGAAGTTCGGTGCTGAGACAGAAGGAAAGCTGTTATTACACATGTaGGTACATGTGAAGGATAGG | + |
|
Preference number: 2 (lower is better) Translates to: LVRSYCCSSKFGAETEGKLLLHM*VHVKDR Trigger: CCTATCCTTCACATGTACTCACATGTGTAATAACAG...CTTTCCTTCTGTCTCAGCACCGAACTTCGAGGAACAACAATATGATCTAACCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000213724.2 ENSMUST00000214442.2 ENSMUST00000215225.3 ENSMUST00000217421.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGTTAGATCATATTGTTGTTCCTCGAAGTTCGGTGCTGAGACAGAAGGAAAGACATGTGAGTACATGTaGAGGATAGGTGATATTTCT | + |
|
Preference number: 2 (lower is better) Translates to: LVRSYCCSSKFGAETEGKTCEYM*RIGDIS Trigger: AGAAATATCACCTATCCTTCACATGTACTCACATGT...CTTTCCTTCTGTCTCAGCACCGAACTTCGAGGAACAACAATATGATCTAACCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000213724.2 ENSMUST00000214442.2 ENSMUST00000215225.3 ENSMUST00000217421.2 |
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| 3UTR-3UTR CCA 90 bp | TCACACTTAAAGACAGGCCACATACCCAGCTGTAATGGCCAAAACAAAAATGAAGCTCTGGGGGAGTACTaGTTAGATCATATTGTTGTT | + |
|
Preference number: 2 (lower is better) Translates to: SHLKTGHIPSCNGQNKNEALGEY*LDHIVV Trigger: AACAACAATATGATCTAACCAGTACTCCCCCAGAGC...TTCATTTTTGTTTTGGCCATTACAGCTGGGTATGTGGCCTGTCTTTAAGTGTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000213724.2 ENSMUST00000214442.2 ENSMUST00000215225.3 ENSMUST00000217421.2 |
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| 3UTR-3UTR CCA 90 bp | TATTGGGTCTGCAAAGTTTCAAGAAAGATGAGTTCTCAGTACAGGGAAGTGGAAGCTCTGGGGGAGTACTaGTTAGATCATATTGTTGTT | + |
|
Preference number: 2 (lower is better) Translates to: YWVCKVSRKMSSQYREVEALGEY*LDHIVV Trigger: AACAACAATATGATCTAACCAGTACTCCCCCAGAGC...TTCCACTTCCCTGTACTGAGAACTCATCTTTCTTGAAACTTTGCAGACCCAATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000213724.2 ENSMUST00000214442.2 ENSMUST00000215225.3 ENSMUST00000217421.2 |
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| 3UTR-3UTR CCA 90 bp | TATTGGGTCTGCAAAGTTTCAAGAAAGATGAGTTCTCAGTACAGGGAAGTGGAATATGGAGTCACAGGATaGATATCCCTTTGCTTTCTC | + |
|
Preference number: 2 (lower is better) Translates to: YWVCKVSRKMSSQYREVEYGVTG*ISLCFL Trigger: GAGAAAGCAAAGGGATATCCATCCTGTGACTCCATA...TTCCACTTCCCTGTACTGAGAACTCATCTTTCTTGAAACTTTGCAGACCCAATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000213724.2 ENSMUST00000214442.2 ENSMUST00000215225.3 ENSMUST00000217421.2 |
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| 3UTR-3UTR TCA 90 bp | TATTGGGTCTGCAAAGTTTCAAGAAAGATGAGTTCTCAGTACAGGGAAGTGGAACATGTGAAGGATAGGTaGTATTTCTGCCTGTTAACA | + |
|
Preference number: 2 (lower is better) Translates to: YWVCKVSRKMSSQYREVEHVKDR*YFCLLT Trigger: TGTTAACAGGCAGAAATATCACCTATCCTTCACATG...TTCCACTTCCCTGTACTGAGAACTCATCTTTCTTGAAACTTTGCAGACCCAATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000213724.2 ENSMUST00000214442.2 ENSMUST00000215225.3 ENSMUST00000217421.2 |
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| 3UTR-3UTR TCA 90 bp | TCACACTTAAAGACAGGCCACATACCCAGCTGTAATGGCCAAAACAAAAATGAACATGTGAAGGATAGGTaGTATTTCTGCCTGTTAACA | + |
|
Preference number: 2 (lower is better) Translates to: SHLKTGHIPSCNGQNKNEHVKDR*YFCLLT Trigger: TGTTAACAGGCAGAAATATCACCTATCCTTCACATG...TTCATTTTTGTTTTGGCCATTACAGCTGGGTATGTGGCCTGTCTTTAAGTGTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000213724.2 ENSMUST00000214442.2 ENSMUST00000215225.3 ENSMUST00000217421.2 |
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| 3UTR-3UTR TCA 90 bp | TCACACTTAAAGACAGGCCACATACCCAGCTGTAATGGCCAAAACAAAAATGAACTGTTATTACACATGTaGGTACATGTGAAGGATAGG | + |
|
Preference number: 2 (lower is better) Translates to: SHLKTGHIPSCNGQNKNELLLHM*VHVKDR Trigger: CCTATCCTTCACATGTACTCACATGTGTAATAACAG...TTCATTTTTGTTTTGGCCATTACAGCTGGGTATGTGGCCTGTCTTTAAGTGTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000213724.2 ENSMUST00000214442.2 ENSMUST00000215225.3 ENSMUST00000217421.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGTTAGATCATATTGTTGTTCCTCGAAGTTCGGTGCTGAGACAGAAGGAAAGTATTCGTTTGTTTGTTaGAGTGATTGGTTGATGGAT | + |
|
Preference number: 2 (lower is better) Translates to: LVRSYCCSSKFGAETEGKYSFVC*SDWLMD Trigger: ATCCATCAACCAATCACTCCAACAAACAAACGAATA...CTTTCCTTCTGTCTCAGCACCGAACTTCGAGGAACAACAATATGATCTAACCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000213724.2 ENSMUST00000214442.2 ENSMUST00000215225.3 ENSMUST00000217421.2 |
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| 3UTR-3UTR TCA 90 bp | TATTGGGTCTGCAAAGTTTCAAGAAAGATGAGTTCTCAGTACAGGGAAGTGGAAACATGTGAGTACATGTaGAGGATAGGTGATATTTCT | + |
|
Preference number: 2 (lower is better) Translates to: YWVCKVSRKMSSQYREVETCEYM*RIGDIS Trigger: AGAAATATCACCTATCCTTCACATGTACTCACATGT...TTCCACTTCCCTGTACTGAGAACTCATCTTTCTTGAAACTTTGCAGACCCAATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000213724.2 ENSMUST00000214442.2 ENSMUST00000215225.3 ENSMUST00000217421.2 |
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| 3UTR-3UTR GCA 90 bp | TATTGGGTCTGCAAAGTTTCAAGAAAGATGAGTTCTCAGTACAGGGAAGTGGAATCAAACCATTCTGTTTaGATAACAAGTGTCCCTTTC | + |
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Preference number: 2 (lower is better) Translates to: YWVCKVSRKMSSQYREVESNHSV*ITSVPF Trigger: GAAAGGGACACTTGTTATGCAAACAGAATGGTTTGA...TTCCACTTCCCTGTACTGAGAACTCATCTTTCTTGAAACTTTGCAGACCCAATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000213724.2 ENSMUST00000214442.2 ENSMUST00000215225.3 ENSMUST00000217421.2 |
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| 3UTR-3UTR CCA 90 bp | TATTGGGTCTGCAAAGTTTCAAGAAAGATGAGTTCTCAGTACAGGGAAGTGGAATATTCGTTTGTTTGTTaGAGTGATTGGTTGATGGAT | + |
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Preference number: 2 (lower is better) Translates to: YWVCKVSRKMSSQYREVEYSFVC*SDWLMD Trigger: ATCCATCAACCAATCACTCCAACAAACAAACGAATA...TTCCACTTCCCTGTACTGAGAACTCATCTTTCTTGAAACTTTGCAGACCCAATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000213724.2 ENSMUST00000214442.2 ENSMUST00000215225.3 ENSMUST00000217421.2 |
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| 3UTR-3UTR CCA 90 bp | TCACACTTAAAGACAGGCCACATACCCAGCTGTAATGGCCAAAACAAAAATGAATATTCGTTTGTTTGTTaGAGTGATTGGTTGATGGAT | + |
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Preference number: 2 (lower is better) Translates to: SHLKTGHIPSCNGQNKNEYSFVC*SDWLMD Trigger: ATCCATCAACCAATCACTCCAACAAACAAACGAATA...TTCATTTTTGTTTTGGCCATTACAGCTGGGTATGTGGCCTGTCTTTAAGTGTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000213724.2 ENSMUST00000214442.2 ENSMUST00000215225.3 ENSMUST00000217421.2 |
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| 3UTR-3UTR GCA 90 bp | AAATCTCCACTGAACCTGTGTACTAGCATTGGATTAAGAATATGTTTCTGTGCTTCAAACCATTCTGTTTaGATAACAAGTGTCCCTTTC | + |
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Preference number: 2 (lower is better) Translates to: KSPLNLCTSIGLRICFCASNHSV*ITSVPF Trigger: GAAAGGGACACTTGTTATGCAAACAGAATGGTTTGA...AGCACAGAAACATATTCTTAATCCAATGCTAGTACACAGGTTCAGTGGAGATTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000213724.2 ENSMUST00000214442.2 ENSMUST00000215225.3 ENSMUST00000217421.2 |
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| 3UTR GCA 72 bp | TCGGTGCTGAGACAGAAGGAAAGACCATCCAGAGACTaGCCCACCCGGGATACATCCCATATACAACCACCA | + |
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Preference number: 3 (lower is better) Translates to: SVLRQKERPSRD*PTRDTSHIQPP Trigger: TGGTGGTTGTATATGGGATGTATCCCGGGTGGGGCAGTCTCTGGATGGTCTTTCCTTCTGTCTCAGCACCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000213724.2 ENSMUST00000214442.2 ENSMUST00000215225.3 ENSMUST00000217421.2 |
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| 3UTR-3UTR CAA 90 bp | GTTGTTCCTCGAAGTTCGGTGCTGAGACAGAAGGAAAGACCATCCAGAGACTGCCTCAAACCATTCTGTTaGCATAACAAGTGTCCCTTT | + |
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Preference number: 3 (lower is better) Translates to: VVPRSSVLRQKERPSRDCLKPFC*HNKCPF Trigger: AAAGGGACACTTGTTATGCAAACAGAATGGTTTGAG...GCAGTCTCTGGATGGTCTTTCCTTCTGTCTCAGCACCGAACTTCGAGGAACAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000213724.2 ENSMUST00000214442.2 ENSMUST00000215225.3 ENSMUST00000217421.2 |
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| 3UTR GCA 72 bp | TACATCCCATATACAACCACCAAACCCAGACACTATTaGATATGCCAGCAAGATTTTGCTGACAGGACTCTG | + |
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Preference number: 3 (lower is better) Translates to: YIPYTTTKPRHY*ICQQDFADRTL Trigger: CAGAGTCCTGTCAGCAAAATCTTGCTGGCATATGCAATAGTGTCTGGGTTTGGTGGTTGTATATGGGATGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000213724.2 ENSMUST00000214442.2 ENSMUST00000215225.3 ENSMUST00000217421.2 |
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| 3UTR-3UTR CAA 90 bp | CTGGTTAGATCATATTGTTGTTCCTCGAAGTTCGGTGCTGAGACAGAAGGAAAGCTCAAACCATTCTGTTaGCATAACAAGTGTCCCTTT | + |
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Preference number: 3 (lower is better) Translates to: LVRSYCCSSKFGAETEGKLKPFC*HNKCPF Trigger: AAAGGGACACTTGTTATGCAAACAGAATGGTTTGAG...CTTTCCTTCTGTCTCAGCACCGAACTTCGAGGAACAACAATATGATCTAACCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000213724.2 ENSMUST00000214442.2 ENSMUST00000215225.3 ENSMUST00000217421.2 |
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| 3UTR-3UTR CAA 90 bp | CTGGTTAGATCATATTGTTGTTCCTCGAAGTTCGGTGCTGAGACAGAAGGAAAGGTTGTTGTTATTCGTTaGTTTGTTGGAGTGATTGGT | + |
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Preference number: 3 (lower is better) Translates to: LVRSYCCSSKFGAETEGKVVVIR*FVGVIG Trigger: ACCAATCACTCCAACAAACAAACGAATAACAACAAC...CTTTCCTTCTGTCTCAGCACCGAACTTCGAGGAACAACAATATGATCTAACCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000213724.2 ENSMUST00000214442.2 ENSMUST00000215225.3 ENSMUST00000217421.2 |
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| 3UTR-3UTR CAA 90 bp | TATTGGGTCTGCAAAGTTTCAAGAAAGATGAGTTCTCAGTACAGGGAAGTGGAACTCAAACCATTCTGTTaGCATAACAAGTGTCCCTTT | + |
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Preference number: 3 (lower is better) Translates to: YWVCKVSRKMSSQYREVELKPFC*HNKCPF Trigger: AAAGGGACACTTGTTATGCAAACAGAATGGTTTGAG...TTCCACTTCCCTGTACTGAGAACTCATCTTTCTTGAAACTTTGCAGACCCAATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000213724.2 ENSMUST00000214442.2 ENSMUST00000215225.3 ENSMUST00000217421.2 |
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| 3UTR TCA 72 bp | TCTGCATATATTGGGTCTGCAAAGTTTCAAGAAAGATaGGTTCTCAGTACAGGGAAGTGGAATAGACATGAG | + |
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Preference number: 3 (lower is better) Translates to: SAYIGSAKFQER*VLSTGKWNRHE Trigger: CTCATGTCTATTCCACTTCCCTGTACTGAGAACTCATCTTTCTTGAAACTTTGCAGACCCAATATATGCAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000213724.2 ENSMUST00000214442.2 ENSMUST00000215225.3 ENSMUST00000217421.2 |
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| 3UTR CCA 72 bp | ATGGAGTCACAGGATGGATATCCCTTTGCTTTCTCTTaGGATGACTTCAATAATTGTCTTCTCCAATTTCAA | + |
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Preference number: 3 (lower is better) Translates to: MESQDGYPFAFS*DDFNNCLLQFQ Trigger: TTGAAATTGGAGAAGACAATTATTGAAGTCATCCCAAGAGAAAGCAAAGGGATATCCATCCTGTGACTCCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000213724.2 ENSMUST00000214442.2 ENSMUST00000215225.3 ENSMUST00000217421.2 |
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| 3UTR-3UTR CAA 90 bp | AAATCTCCACTGAACCTGTGTACTAGCATTGGATTAAGAATATGTTTCTGTGCTCTCAAACCATTCTGTTaGCATAACAAGTGTCCCTTT | + |
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Preference number: 3 (lower is better) Translates to: KSPLNLCTSIGLRICFCALKPFC*HNKCPF Trigger: AAAGGGACACTTGTTATGCAAACAGAATGGTTTGAG...AGCACAGAAACATATTCTTAATCCAATGCTAGTACACAGGTTCAGTGGAGATTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000213724.2 ENSMUST00000214442.2 ENSMUST00000215225.3 ENSMUST00000217421.2 |
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| CDS-3UTR CCA 90 bp | GTTGTTCCTCGAAGTTCGGTGCTGAGACAGAAGGAAAGACCATCCAGAGACTGCAGCACAACAATTATATaGGACCCACAGGTGGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: VVPRSSVLRQKERPSRDCSTTII*DPQVER Trigger: TCTCTCCACCTGTGGGTCCCATATAATTGTTGTGCT...GCAGTCTCTGGATGGTCTTTCCTTCTGTCTCAGCACCGAACTTCGAGGAACAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000213724.2 ENSMUST00000214442.2 ENSMUST00000215225.3 ENSMUST00000217421.2 |
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| CDS-3UTR GCA 90 bp | GTTGTTCCTCGAAGTTCGGTGCTGAGACAGAAGGAAAGACCATCCAGAGACTGCCCACAGAAAGGCAGCTaGAATGTGAAGATGATTTGT | + |
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Preference number: 4 (lower is better) Translates to: VVPRSSVLRQKERPSRDCPQKGS*NVKMIC Trigger: ACAAATCATCTTCACATTGCAGCTGCCTTTCTGTGG...GCAGTCTCTGGATGGTCTTTCCTTCTGTCTCAGCACCGAACTTCGAGGAACAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000213724.2 ENSMUST00000214442.2 ENSMUST00000215225.3 ENSMUST00000217421.2 |
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| CDS-3UTR CCA 90 bp | CTGGTTAGATCATATTGTTGTTCCTCGAAGTTCGGTGCTGAGACAGAAGGAAAGGCCCCAGTGAAGAAGTaGACTGTAAACAGTTGTGTC | + |
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Preference number: 4 (lower is better) Translates to: LVRSYCCSSKFGAETEGKAPVKK*TVNSCV Trigger: GACACAACTGTTTACAGTCCACTTCTTCACTGGGGC...CTTTCCTTCTGTCTCAGCACCGAACTTCGAGGAACAACAATATGATCTAACCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000213724.2 ENSMUST00000214442.2 ENSMUST00000215225.3 ENSMUST00000217421.2 |
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| CDS-3UTR CCA 90 bp | TATTGGGTCTGCAAAGTTTCAAGAAAGATGAGTTCTCAGTACAGGGAAGTGGAAGCCCCAGTGAAGAAGTaGACTGTAAACAGTTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: YWVCKVSRKMSSQYREVEAPVKK*TVNSCV Trigger: GACACAACTGTTTACAGTCCACTTCTTCACTGGGGC...TTCCACTTCCCTGTACTGAGAACTCATCTTTCTTGAAACTTTGCAGACCCAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000213724.2 ENSMUST00000214442.2 ENSMUST00000215225.3 ENSMUST00000217421.2 |
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| CDS-3UTR CCA 90 bp | TCACACTTAAAGACAGGCCACATACCCAGCTGTAATGGCCAAAACAAAAATGAAGCCCCAGTGAAGAAGTaGACTGTAAACAGTTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SHLKTGHIPSCNGQNKNEAPVKK*TVNSCV Trigger: GACACAACTGTTTACAGTCCACTTCTTCACTGGGGC...TTCATTTTTGTTTTGGCCATTACAGCTGGGTATGTGGCCTGTCTTTAAGTGTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000213724.2 ENSMUST00000214442.2 ENSMUST00000215225.3 ENSMUST00000217421.2 |
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| CDS-3UTR CCA 90 bp | TATTGGGTCTGCAAAGTTTCAAGAAAGATGAGTTCTCAGTACAGGGAAGTGGAAAGCACAACAATTATATaGGACCCACAGGTGGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: YWVCKVSRKMSSQYREVESTTII*DPQVER Trigger: TCTCTCCACCTGTGGGTCCCATATAATTGTTGTGCT...TTCCACTTCCCTGTACTGAGAACTCATCTTTCTTGAAACTTTGCAGACCCAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000213724.2 ENSMUST00000214442.2 ENSMUST00000215225.3 ENSMUST00000217421.2 |
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| CDS-3UTR CCA 90 bp | TCACACTTAAAGACAGGCCACATACCCAGCTGTAATGGCCAAAACAAAAATGAAAGCACAACAATTATATaGGACCCACAGGTGGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: SHLKTGHIPSCNGQNKNESTTII*DPQVER Trigger: TCTCTCCACCTGTGGGTCCCATATAATTGTTGTGCT...TTCATTTTTGTTTTGGCCATTACAGCTGGGTATGTGGCCTGTCTTTAAGTGTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000213724.2 ENSMUST00000214442.2 ENSMUST00000215225.3 ENSMUST00000217421.2 |
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| CDS-3UTR GCA 90 bp | TATTGGGTCTGCAAAGTTTCAAGAAAGATGAGTTCTCAGTACAGGGAAGTGGAACCACAGAAAGGCAGCTaGAATGTGAAGATGATTTGT | + |
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Preference number: 4 (lower is better) Translates to: YWVCKVSRKMSSQYREVEPQKGS*NVKMIC Trigger: ACAAATCATCTTCACATTGCAGCTGCCTTTCTGTGG...TTCCACTTCCCTGTACTGAGAACTCATCTTTCTTGAAACTTTGCAGACCCAATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000213724.2 ENSMUST00000214442.2 ENSMUST00000215225.3 ENSMUST00000217421.2 |
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| CDS-3UTR CCA 90 bp | ATGAAAATAAATCTCAAACCATTCTGTTTGCATAACAAGTGTCCCTTTCCCACTCGACCTTCAGAACTGTaGGCTCTCAGAGAGAACAAG | + |
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Preference number: 4 (lower is better) Translates to: MKINLKPFCLHNKCPFPTRPSEL*ALRENK Trigger: CTTGTTCTCTCTGAGAGCCCACAGTTCTGAAGGTCG...AGTGGGAAAGGGACACTTGTTATGCAAACAGAATGGTTTGAGATTTATTTTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000213724.2 ENSMUST00000214442.2 ENSMUST00000215225.3 ENSMUST00000217421.2 |
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| CDS-3UTR CCA 90 bp | ATGAAAATAAATCTCAAACCATTCTGTTTGCATAACAAGTGTCCCTTTCCCACTGCCCCAGTGAAGAAGTaGACTGTAAACAGTTGTGTC | + |
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Preference number: 4 (lower is better) Translates to: MKINLKPFCLHNKCPFPTAPVKK*TVNSCV Trigger: GACACAACTGTTTACAGTCCACTTCTTCACTGGGGC...AGTGGGAAAGGGACACTTGTTATGCAAACAGAATGGTTTGAGATTTATTTTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000213724.2 ENSMUST00000214442.2 ENSMUST00000215225.3 ENSMUST00000217421.2 |
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| CDS-3UTR CCA 90 bp | AAATCTCCACTGAACCTGTGTACTAGCATTGGATTAAGAATATGTTTCTGTGCTAGCACAACAATTATATaGGACCCACAGGTGGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: KSPLNLCTSIGLRICFCASTTII*DPQVER Trigger: TCTCTCCACCTGTGGGTCCCATATAATTGTTGTGCT...AGCACAGAAACATATTCTTAATCCAATGCTAGTACACAGGTTCAGTGGAGATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000213724.2 ENSMUST00000214442.2 ENSMUST00000215225.3 ENSMUST00000217421.2 |
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| CDS-3UTR GCA 90 bp | AAATCTCCACTGAACCTGTGTACTAGCATTGGATTAAGAATATGTTTCTGTGCTCCACAGAAAGGCAGCTaGAATGTGAAGATGATTTGT | + |
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Preference number: 4 (lower is better) Translates to: KSPLNLCTSIGLRICFCAPQKGS*NVKMIC Trigger: ACAAATCATCTTCACATTGCAGCTGCCTTTCTGTGG...AGCACAGAAACATATTCTTAATCCAATGCTAGTACACAGGTTCAGTGGAGATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000213724.2 ENSMUST00000214442.2 ENSMUST00000215225.3 ENSMUST00000217421.2 |
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| CDS-3UTR CAA 90 bp | GTTGTTCCTCGAAGTTCGGTGCTGAGACAGAAGGAAAGACCATCCAGAGACTGCACCACAATAATCATGTaGCCCCCAATAGTTGCAAGG | + |
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Preference number: 5 (lower is better) Translates to: VVPRSSVLRQKERPSRDCTTIIM*PPIVAR Trigger: CCTTGCAACTATTGGGGGCAACATGATTATTGTGGT...GCAGTCTCTGGATGGTCTTTCCTTCTGTCTCAGCACCGAACTTCGAGGAACAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000213724.2 ENSMUST00000214442.2 ENSMUST00000215225.3 ENSMUST00000217421.2 |
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| CDS-3UTR CAA 90 bp | TCACACTTAAAGACAGGCCACATACCCAGCTGTAATGGCCAAAACAAAAATGAAACCACAATAATCATGTaGCCCCCAATAGTTGCAAGG | + |
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Preference number: 5 (lower is better) Translates to: SHLKTGHIPSCNGQNKNETTIIM*PPIVAR Trigger: CCTTGCAACTATTGGGGGCAACATGATTATTGTGGT...TTCATTTTTGTTTTGGCCATTACAGCTGGGTATGTGGCCTGTCTTTAAGTGTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000213724.2 ENSMUST00000214442.2 ENSMUST00000215225.3 ENSMUST00000217421.2 |
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| CDS-3UTR CAA 90 bp | ATGAAAATAAATCTCAAACCATTCTGTTTGCATAACAAGTGTCCCTTTCCCACTACCACAATAATCATGTaGCCCCCAATAGTTGCAAGG | + |
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Preference number: 5 (lower is better) Translates to: MKINLKPFCLHNKCPFPTTTIIM*PPIVAR Trigger: CCTTGCAACTATTGGGGGCAACATGATTATTGTGGT...AGTGGGAAAGGGACACTTGTTATGCAAACAGAATGGTTTGAGATTTATTTTCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000213724.2 ENSMUST00000214442.2 ENSMUST00000215225.3 ENSMUST00000217421.2 |
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| CDS GCA 72 bp | GAAGATGATTTGTATGATAGAATGCAAGAAGCCTCCTaGCCAAGACACCACTACCAAAATTCCACAGAGCCT | + |
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Preference number: 6 (lower is better) Translates to: EDDLYDRMQEAS*PRHHYQNSTEP Trigger: AGGCTCTGTGGAATTTTGGTAGTGGTGTCTTGGGCAGGAGGCTTCTTGCATTCTATCATACAAATCATCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000099797.2 ENSMUST00000213724.2 ENSMUST00000214442.2 ENSMUST00000215225.3 ENSMUST00000217421.2 |
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