Pregenerated sensors for OLFR1218 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075105Ensembl transcript IDs: ENSMUST00000099798.2, ENSMUST00000213609.3, ENSMUST00000215048.2, ENSMUST00000215054.2
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAAGGGATTGAATATGAGCCTTCCTATCCTTCTACCTTATTTTCTTaGGGGAAGACTCCAGTGAAACTTCCACTCACTGTTTGTCAAACA | + |
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Preference number: 1 (lower is better) Translates to: EGIEYEPSYPSTLFS*GKTPVKLPLTVCQT Trigger: TGTTTGACAAACAGTGAGTGGAAGTTTCACTGGAGTCTTCCCTCAAGAAAATAAGGTAGAAGGATAGGAAGGCTCATATTCAATCCCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| 3UTR TCA 90 bp | AGCCTTCCTATCCTTCTACCTTATTTTCTTGAGGGAAGACTCCAGTaGAACTTCCACTCACTGTTTGTCAAACATATTTGTGGTGGAAAA | + |
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Preference number: 1 (lower is better) Translates to: SLPILLPYFLEGRLQ*NFHSLFVKHICGGK Trigger: TTTTCCACCACAAATATGTTTGACAAACAGTGAGTGGAAGTTTCACTGGAGTCTTCCCTCAAGAAAATAAGGTAGAAGGATAGGAAGGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| 3UTR CCA 90 bp | ACATTGGTATTTCTCTACATAATCAATTCCCAGTGCTCATTGGAGTaGGATAGTCACATCATCCAAGAGAAATTCCAGCTGTTCTCATGT | + |
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Preference number: 1 (lower is better) Translates to: TLVFLYIINSQCSLE*DSHIIQEKFQLFSC Trigger: ACATGAGAACAGCTGGAATTTCTCTTGGATGATGTGACTATCCCACTCCAATGAGCACTGGGAATTGATTATGTAGAGAAATACCAATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| 3UTR-3UTR TCA 90 bp | GTGTGCACAGAGCAAAACACTTTCTTAGGAAAAGGGACTACACCGAGAGGATTCGAGGGAAGACTCCAGTaGAACTTCCACTCACTGTTT | + |
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Preference number: 2 (lower is better) Translates to: VCTEQNTFLGKGTTPRGFEGRLQ*NFHSLF Trigger: AAACAGTGAGTGGAAGTTTCACTGGAGTCTTCCCTC...GAATCCTCTCGGTGTAGTCCCTTTTCCTAAGAAAGTGTTTTGCTCTGTGCACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| 3UTR-3UTR CCA 90 bp | GTGTGCACAGAGCAAAACACTTTCTTAGGAAAAGGGACTACACCGAGAGGATTCCAGTGCTCATTGGAGTaGGATAGTCACATCATCCAA | + |
|
Preference number: 2 (lower is better) Translates to: VCTEQNTFLGKGTTPRGFQCSLE*DSHIIQ Trigger: TTGGATGATGTGACTATCCCACTCCAATGAGCACTG...GAATCCTCTCGGTGTAGTCCCTTTTCCTAAGAAAGTGTTTTGCTCTGTGCACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| 3UTR-3UTR TCA 90 bp | GTGTGCACAGAGCAAAACACTTTCTTAGGAAAAGGGACTACACCGAGAGGATTCCAGACTACCTTAAAATaGAGCCAGATGATGCAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: VCTEQNTFLGKGTTPRGFQTTLK*SQMMQE Trigger: TTCCTGCATCATCTGGCTTCATTTTAAGGTAGTCTG...GAATCCTCTCGGTGTAGTCCCTTTTCCTAAGAAAGTGTTTTGCTCTGTGCACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| 3UTR-3UTR TCA 90 bp | GTGTGCACAGAGCAAAACACTTTCTTAGGAAAAGGGACTACACCGAGAGGATTCTTAAGTGACACATTTTaGTACCTCCTCTCTGGTTCC | + |
|
Preference number: 2 (lower is better) Translates to: VCTEQNTFLGKGTTPRGFLSDTF*YLLSGS Trigger: GGAACCAGAGAGGAGGTATCAAAATGTGTCACTTAA...GAATCCTCTCGGTGTAGTCCCTTTTCCTAAGAAAGTGTTTTGCTCTGTGCACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| 3UTR-3UTR GCA 90 bp | GTGTGCACAGAGCAAAACACTTTCTTAGGAAAAGGGACTACACCGAGAGGATTCTATACCAATGCTGAGTaGCCAATGCAGAGTGAAACT | + |
|
Preference number: 2 (lower is better) Translates to: VCTEQNTFLGKGTTPRGFYTNAE*PMQSET Trigger: AGTTTCACTCTGCATTGGGCACTCAGCATTGGTATA...GAATCCTCTCGGTGTAGTCCCTTTTCCTAAGAAAGTGTTTTGCTCTGTGCACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| 3UTR-3UTR TCA 90 bp | GTGTGCACAGAGCAAAACACTTTCTTAGGAAAAGGGACTACACCGAGAGGATTCAGTATCCTTTCCCATTaGCTCATATTCTCAACACTG | + |
|
Preference number: 2 (lower is better) Translates to: VCTEQNTFLGKGTTPRGFSILSH*LIFSTL Trigger: CAGTGTTGAGAATATGAGTCAATGGGAAAGGATACT...GAATCCTCTCGGTGTAGTCCCTTTTCCTAAGAAAGTGTTTTGCTCTGTGCACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| 3UTR-3UTR TCA 90 bp | GTGTGCACAGAGCAAAACACTTTCTTAGGAAAAGGGACTACACCGAGAGGATTCTCTCTGTTCCTTAAGTaGCACATTTTGATACCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: VCTEQNTFLGKGTTPRGFSLFLK*HILIPP Trigger: AGGAGGTATCAAAATGTGTCACTTAAGGAACAGAGA...GAATCCTCTCGGTGTAGTCCCTTTTCCTAAGAAAGTGTTTTGCTCTGTGCACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| 3UTR-3UTR GCA 90 bp | GTGTGCACAGAGCAAAACACTTTCTTAGGAAAAGGGACTACACCGAGAGGATTCATAATCAATTCCCAGTaGTCATTGGAGTGGGATAGT | + |
|
Preference number: 2 (lower is better) Translates to: VCTEQNTFLGKGTTPRGFIINSQ*SLEWDS Trigger: ACTATCCCACTCCAATGAGCACTGGGAATTGATTAT...GAATCCTCTCGGTGTAGTCCCTTTTCCTAAGAAAGTGTTTTGCTCTGTGCACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| 3UTR-3UTR TCA 90 bp | TCCTTCTACCTTATTTTCTTGAGGGAAGACTCCAGTGAAACTTCCACTCACTGTAGTATCCTTTCCCATTaGCTCATATTCTCAACACTG | + |
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Preference number: 2 (lower is better) Translates to: SFYLIFLREDSSETSTHCSILSH*LIFSTL Trigger: CAGTGTTGAGAATATGAGTCAATGGGAAAGGATACT...ACAGTGAGTGGAAGTTTCACTGGAGTCTTCCCTCAAGAAAATAAGGTAGAAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| 3UTR-3UTR GCA 90 bp | GTGTGCACAGAGCAAAACACTTTCTTAGGAAAAGGGACTACACCGAGAGGATTCATTGTGTTCTCTTTCTaGGTTTATAGGTTAGAAGGT | + |
|
Preference number: 2 (lower is better) Translates to: VCTEQNTFLGKGTTPRGFIVFSF*VYRLEG Trigger: ACCTTCTAACCTATAAACGCAGAAAGAGAACACAAT...GAATCCTCTCGGTGTAGTCCCTTTTCCTAAGAAAGTGTTTTGCTCTGTGCACAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| 3UTR-3UTR GCA 90 bp | GTGTGCACAGAGCAAAACACTTTCTTAGGAAAAGGGACTACACCGAGAGGATTCATATGTCAATATCTTTaGCTTACACTGCCTGTGAAA | + |
|
Preference number: 2 (lower is better) Translates to: VCTEQNTFLGKGTTPRGFICQYL*LTLPVK Trigger: TTTCACAGGCAGTGTAAGGCAAAGATATTGACATAT...GAATCCTCTCGGTGTAGTCCCTTTTCCTAAGAAAGTGTTTTGCTCTGTGCACAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| 3UTR CAA 90 bp | AGATACACATTGGTATTTCTCTACATAATCAATTCCCAGTGCTCATaGGAGTGGGATAGTCACATCATCCAAGAGAAATTCCAGCTGTTC | + |
|
Preference number: 2 (lower is better) Translates to: RYTLVFLYIINSQCS*EWDSHIIQEKFQLF Trigger: GAACAGCTGGAATTTCTCTTGGATGATGTGACTATCCCACTCCAATGAGCACTGGGAATTGATTATGTAGAGAAATACCAATGTGTATCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGTGAAATTAATGCCTGCAAGCTTTTTGTGTTATACTGGAATAGGAGATACACAGTGCTCATTGGAGTaGGATAGTCACATCATCCAA | + |
|
Preference number: 2 (lower is better) Translates to: PVKLMPASFLCYTGIGDTQCSLE*DSHIIQ Trigger: TTGGATGATGTGACTATCCCACTCCAATGAGCACTG...TGTATCTCCTATTCCAGTATAACACAAAAAGCTTGCAGGCATTAATTTCACAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| 3UTR CAA 90 bp | AATGCCTGCAAGCTTTTTGTGTTATACTGGAATAGGAGATACACATaGGTATTTCTCTACATAATCAATTCCCAGTGCTCATTGGAGTGG | + |
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Preference number: 2 (lower is better) Translates to: NACKLFVLYWNRRYT*VFLYIINSQCSLEW Trigger: CCACTCCAATGAGCACTGGGAATTGATTATGTAGAGAAATACCAATGTGTATCTCCTATTCCAGTATAACACAAAAAGCTTGCAGGCATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| 3UTR-3UTR CAA 90 bp | GTGTGCACAGAGCAAAACACTTTCTTAGGAAAAGGGACTACACCGAGAGGATTCAGCTGCTGGATAGTGTaGTTAATTCTGAACAGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: VCTEQNTFLGKGTTPRGFSCWIV*LILNRR Trigger: CCTTCTGTTCAGAATTAACAACACTATCCAGCAGCT...GAATCCTCTCGGTGTAGTCCCTTTTCCTAAGAAAGTGTTTTGCTCTGTGCACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| 3UTR-3UTR CAA 90 bp | GTGTGCACAGAGCAAAACACTTTCTTAGGAAAAGGGACTACACCGAGAGGATTCGTAGCTCCATGTGTATaGCTTCTGGCAGTTAAAATC | + |
|
Preference number: 3 (lower is better) Translates to: VCTEQNTFLGKGTTPRGFVAPCV*LLAVKI Trigger: GATTTTAACTGCCAGAAGCAATACACATGGAGCTAC...GAATCCTCTCGGTGTAGTCCCTTTTCCTAAGAAAGTGTTTTGCTCTGTGCACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| 3UTR-3UTR CAA 90 bp | GTGTGCACAGAGCAAAACACTTTCTTAGGAAAAGGGACTACACCGAGAGGATTCAGAGACAGAAATAAGTaGTGGGCTCACTCTTTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: VCTEQNTFLGKGTTPRGFRDRNK*WAHSLS Trigger: TGACAAAGAGTGAGCCCACAACTTATTTCTGTCTCT...GAATCCTCTCGGTGTAGTCCCTTTTCCTAAGAAAGTGTTTTGCTCTGTGCACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| 3UTR-3UTR CAA 90 bp | GTGTGCACAGAGCAAAACACTTTCTTAGGAAAAGGGACTACACCGAGAGGATTCACTTCCACTCACTGTTaGTCAAACATATTTGTGGTG | + |
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Preference number: 3 (lower is better) Translates to: VCTEQNTFLGKGTTPRGFTSTHC*SNIFVV Trigger: CACCACAAATATGTTTGACAAACAGTGAGTGGAAGT...GAATCCTCTCGGTGTAGTCCCTTTTCCTAAGAAAGTGTTTTGCTCTGTGCACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| 3UTR-3UTR CAA 90 bp | GTGTGCACAGAGCAAAACACTTTCTTAGGAAAAGGGACTACACCGAGAGGATTCTTCTACCTTATTTTCTaGAGGGAAGACTCCAGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: VCTEQNTFLGKGTTPRGFFYLIF*REDSSE Trigger: TTCACTGGAGTCTTCCCTCAAGAAAATAAGGTAGAA...GAATCCTCTCGGTGTAGTCCCTTTTCCTAAGAAAGTGTTTTGCTCTGTGCACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| 3UTR-3UTR CAA 90 bp | GTGTGCACAGAGCAAAACACTTTCTTAGGAAAAGGGACTACACCGAGAGGATTCTTCAACATCCCTCTGTaGAGGTACTCTGTGTATATT | + |
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Preference number: 3 (lower is better) Translates to: VCTEQNTFLGKGTTPRGFFNIPL*RYSVYI Trigger: AATATACACAGAGTACCTCAACAGAGGGATGTTGAA...GAATCCTCTCGGTGTAGTCCCTTTTCCTAAGAAAGTGTTTTGCTCTGTGCACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| 3UTR GCA 72 bp | TGCAGGAAACCTAGACGACAGATTGTGTTCTCTTTCTaGGTTTATAGGTTAGAAGGTCTCAATGTGTCACTA | + |
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Preference number: 3 (lower is better) Translates to: CRKPRRQIVFSF*VYRLEGLNVSL Trigger: TAGTGACACATTGAGACCTTCTAACCTATAAACGCAGAAAGAGAACACAATCTGTCGTCTAGGTTTCCTGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| 3UTR-3UTR CAA 90 bp | CCTGTGAAATTAATGCCTGCAAGCTTTTTGTGTTATACTGGAATAGGAGATACAACTTCCACTCACTGTTaGTCAAACATATTTGTGGTG | + |
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Preference number: 3 (lower is better) Translates to: PVKLMPASFLCYTGIGDTTSTHC*SNIFVV Trigger: CACCACAAATATGTTTGACAAACAGTGAGTGGAAGT...TGTATCTCCTATTCCAGTATAACACAAAAAGCTTGCAGGCATTAATTTCACAGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| 3UTR-3UTR CAA 90 bp | CCTGTGAAATTAATGCCTGCAAGCTTTTTGTGTTATACTGGAATAGGAGATACATTCAACATCCCTCTGTaGAGGTACTCTGTGTATATT | + |
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Preference number: 3 (lower is better) Translates to: PVKLMPASFLCYTGIGDTFNIPL*RYSVYI Trigger: AATATACACAGAGTACCTCAACAGAGGGATGTTGAA...TGTATCTCCTATTCCAGTATAACACAAAAAGCTTGCAGGCATTAATTTCACAGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| 3UTR TCA 72 bp | ATCCTTCTACCTTATTTTCTTGAGGGAAGACTCCAGTaGAACTTCCACTCACTGTTTGTCAAACATATTTGT | + |
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Preference number: 3 (lower is better) Translates to: ILLPYFLEGRLQ*NFHSLFVKHIC Trigger: ACAAATATGTTTGACAAACAGTGAGTGGAAGTTTCACTGGAGTCTTCCCTCAAGAAAATAAGGTAGAAGGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| 3UTR TCA 72 bp | ATCATCCAAGAGAAATTCCAGCTGTTCTCATGTACTTaGTCTGTCATGAAATTAAAGAAGCGACTGATTTTT | + |
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Preference number: 3 (lower is better) Translates to: IIQEKFQLFSCT*SVMKLKKRLIF Trigger: AAAAATCAGTCGCTTCTTTAATTTCATGACAGATCAAGTACATGAGAACAGCTGGAATTTCTCTTGGATGAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| CDS-3UTR GCA 90 bp | GTGTGCACAGAGCAAAACACTTTCTTAGGAAAAGGGACTACACCGAGAGGATTCACTTGTATGATAGAGTaGAAGAAGCCCCCTGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: VCTEQNTFLGKGTTPRGFTCMIE*KKPPAQ Trigger: CTGGGCAGGGGGCTTCTTGCACTCTATCATACAAGT...GAATCCTCTCGGTGTAGTCCCTTTTCCTAAGAAAGTGTTTTGCTCTGTGCACAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| CDS-3UTR CCA 90 bp | GTGTGCACAGAGCAAAACACTTTCTTAGGAAAAGGGACTACACCGAGAGGATTCCCAAGAAGAAATACATaGGGGATCCCAGCAGTGCAG | + |
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Preference number: 4 (lower is better) Translates to: VCTEQNTFLGKGTTPRGFPRRNT*GIPAVQ Trigger: CTGCACTGCTGGGATCCCCCATGTATTTCTTCTTGG...GAATCCTCTCGGTGTAGTCCCTTTTCCTAAGAAAGTGTTTTGCTCTGTGCACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| CDS-3UTR CCA 90 bp | GTGTGCACAGAGCAAAACACTTTCTTAGGAAAAGGGACTACACCGAGAGGATTCACTACAACAGTAACGTaGGCTCCACAGGTGGAAAGA | + |
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Preference number: 4 (lower is better) Translates to: VCTEQNTFLGKGTTPRGFTTTVT*APQVER Trigger: TCTTTCCACCTGTGGAGCCCACGTTACTGTTGTAGT...GAATCCTCTCGGTGTAGTCCCTTTTCCTAAGAAAGTGTTTTGCTCTGTGCACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| CDS-3UTR CCA 90 bp | TCCTTCTACCTTATTTTCTTGAGGGAAGACTCCAGTGAAACTTCCACTCACTGTCCAAGAAGAAATACATaGGGGATCCCAGCAGTGCAG | + |
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Preference number: 4 (lower is better) Translates to: SFYLIFLREDSSETSTHCPRRNT*GIPAVQ Trigger: CTGCACTGCTGGGATCCCCCATGTATTTCTTCTTGG...ACAGTGAGTGGAAGTTTCACTGGAGTCTTCCCTCAAGAAAATAAGGTAGAAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| CDS-3UTR CCA 90 bp | GTGTGCACAGAGCAAAACACTTTCTTAGGAAAAGGGACTACACCGAGAGGATTCGGCCAGCTTCAGCAATaGAAACAAGTCACATGTGTA | + |
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Preference number: 4 (lower is better) Translates to: VCTEQNTFLGKGTTPRGFGQLQQ*KQVTCV Trigger: TACACATGTGACTTGTTTCCATTGCTGAAGCTGGCC...GAATCCTCTCGGTGTAGTCCCTTTTCCTAAGAAAGTGTTTTGCTCTGTGCACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| CDS-3UTR TCA 90 bp | GTGTGCACAGAGCAAAACACTTTCTTAGGAAAAGGGACTACACCGAGAGGATTCTCAACTATTGGGTTCTaGGAAAGCCCCAAGATTATG | + |
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Preference number: 4 (lower is better) Translates to: VCTEQNTFLGKGTTPRGFSTIGF*ESPKIM Trigger: CATAATCTTGGGGCTTTCTCAGAACCCAATAGTTGA...GAATCCTCTCGGTGTAGTCCCTTTTCCTAAGAAAGTGTTTTGCTCTGTGCACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| CDS-3UTR TCA 90 bp | GTGTGCACAGAGCAAAACACTTTCTTAGGAAAAGGGACTACACCGAGAGGATTCCAATCATCTTGGGTATaGCAGTGGAAGAGACACATA | + |
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Preference number: 4 (lower is better) Translates to: VCTEQNTFLGKGTTPRGFQSSWV*QWKRHI Trigger: TATGTGTCTCTTCCACTGTCATACCCAAGATGATTG...GAATCCTCTCGGTGTAGTCCCTTTTCCTAAGAAAGTGTTTTGCTCTGTGCACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| CDS-3UTR GCA 90 bp | GTGTGCACAGAGCAAAACACTTTCTTAGGAAAAGGGACTACACCGAGAGGATTCAAAACAGTTGCATCATaGAACAGCCAAAGGAGATGG | + |
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Preference number: 4 (lower is better) Translates to: VCTEQNTFLGKGTTPRGFKTVAS*NSQRRW Trigger: CCATCTCCTTTGGCTGTTGCATGATGCAACTGTTTT...GAATCCTCTCGGTGTAGTCCCTTTTCCTAAGAAAGTGTTTTGCTCTGTGCACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| CDS-3UTR GCA 90 bp | GTGTGCACAGAGCAAAACACTTTCTTAGGAAAAGGGACTACACCGAGAGGATTCTGGACTGAAAACAGTTaGATCATGCAACAGCCAAAG | + |
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Preference number: 4 (lower is better) Translates to: VCTEQNTFLGKGTTPRGFWTENS*IMQQPK Trigger: CTTTGGCTGTTGCATGATGCAACTGTTTTCAGTCCA...GAATCCTCTCGGTGTAGTCCCTTTTCCTAAGAAAGTGTTTTGCTCTGTGCACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| CDS-3UTR GCA 90 bp | TCCTTCTACCTTATTTTCTTGAGGGAAGACTCCAGTGAAACTTCCACTCACTGTATATATGAGTGTCCGTaGAGGCCAGCTTCAGCAATG | + |
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Preference number: 4 (lower is better) Translates to: SFYLIFLREDSSETSTHCIYECP*RPASAM Trigger: CATTGCTGAAGCTGGCCTGCACGGACACTCATATAT...ACAGTGAGTGGAAGTTTCACTGGAGTCTTCCCTCAAGAAAATAAGGTAGAAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| CDS-3UTR CCA 90 bp | TCCTTCTACCTTATTTTCTTGAGGGAAGACTCCAGTGAAACTTCCACTCACTGTCGTCCTTCAGAACTGTaGGCTCTCAGAGAGAACAAA | + |
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Preference number: 4 (lower is better) Translates to: SFYLIFLREDSSETSTHCRPSEL*ALRENK Trigger: TTTGTTCTCTCTGAGAGCCCACAGTTCTGAAGGACG...ACAGTGAGTGGAAGTTTCACTGGAGTCTTCCCTCAAGAAAATAAGGTAGAAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| CDS-3UTR CCA 90 bp | TCCTTCTACCTTATTTTCTTGAGGGAAGACTCCAGTGAAACTTCCACTCACTGTACTACAACAGTAACGTaGGCTCCACAGGTGGAAAGA | + |
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Preference number: 4 (lower is better) Translates to: SFYLIFLREDSSETSTHCTTTVT*APQVER Trigger: TCTTTCCACCTGTGGAGCCCACGTTACTGTTGTAGT...ACAGTGAGTGGAAGTTTCACTGGAGTCTTCCCTCAAGAAAATAAGGTAGAAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| CDS-3UTR TCA 90 bp | TCCTTCTACCTTATTTTCTTGAGGGAAGACTCCAGTGAAACTTCCACTCACTGTCAATCATCTTGGGTATaGCAGTGGAAGAGACACATA | + |
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Preference number: 4 (lower is better) Translates to: SFYLIFLREDSSETSTHCQSSWV*QWKRHI Trigger: TATGTGTCTCTTCCACTGTCATACCCAAGATGATTG...ACAGTGAGTGGAAGTTTCACTGGAGTCTTCCCTCAAGAAAATAAGGTAGAAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| CDS-3UTR TCA 90 bp | GTGTGCACAGAGCAAAACACTTTCTTAGGAAAAGGGACTACACCGAGAGGATTCATGTGTAATGATCAATaGCATTGGGTCCACATAAAG | + |
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Preference number: 4 (lower is better) Translates to: VCTEQNTFLGKGTTPRGFMCNDQ*HWVHIK Trigger: CTTTATGTGGACCCAATGTCATTGATCATTACACAT...GAATCCTCTCGGTGTAGTCCCTTTTCCTAAGAAAGTGTTTTGCTCTGTGCACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| CDS-3UTR TCA 90 bp | GTGTGCACAGAGCAAAACACTTTCTTAGGAAAAGGGACTACACCGAGAGGATTCATGGTGTCAGGACATTaGCAAATAAAAGTGTGTGTT | + |
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Preference number: 4 (lower is better) Translates to: VCTEQNTFLGKGTTPRGFMVSGH*QIKVCV Trigger: AACACACACTTTTATTTGTCAATGTCCTGACACCAT...GAATCCTCTCGGTGTAGTCCCTTTTCCTAAGAAAGTGTTTTGCTCTGTGCACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| CDS-3UTR GCA 90 bp | CCTGTGAAATTAATGCCTGCAAGCTTTTTGTGTTATACTGGAATAGGAGATACAACTTGTATGATAGAGTaGAAGAAGCCCCCTGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: PVKLMPASFLCYTGIGDTTCMIE*KKPPAQ Trigger: CTGGGCAGGGGGCTTCTTGCACTCTATCATACAAGT...TGTATCTCCTATTCCAGTATAACACAAAAAGCTTGCAGGCATTAATTTCACAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| CDS-3UTR GCA 90 bp | GTGTGCACAGAGCAAAACACTTTCTTAGGAAAAGGGACTACACCGAGAGGATTCCCACATAAAGGCAGCTaGAATGTGAATATAACTTGT | + |
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Preference number: 4 (lower is better) Translates to: VCTEQNTFLGKGTTPRGFPHKGS*NVNITC Trigger: ACAAGTTATATTCACATTGCAGCTGCCTTTATGTGG...GAATCCTCTCGGTGTAGTCCCTTTTCCTAAGAAAGTGTTTTGCTCTGTGCACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| CDS-3UTR CCA 90 bp | CCTGTGAAATTAATGCCTGCAAGCTTTTTGTGTTATACTGGAATAGGAGATACACCAAGAAGAAATACATaGGGGATCCCAGCAGTGCAG | + |
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Preference number: 4 (lower is better) Translates to: PVKLMPASFLCYTGIGDTPRRNT*GIPAVQ Trigger: CTGCACTGCTGGGATCCCCCATGTATTTCTTCTTGG...TGTATCTCCTATTCCAGTATAACACAAAAAGCTTGCAGGCATTAATTTCACAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| CDS-3UTR GCA 90 bp | CCTGTGAAATTAATGCCTGCAAGCTTTTTGTGTTATACTGGAATAGGAGATACACCCTGCCCAGGATATTaGTACCAAAATGCTACAGAG | + |
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Preference number: 4 (lower is better) Translates to: PVKLMPASFLCYTGIGDTPCPGY*YQNATE Trigger: CTCTGTAGCATTTTGGTAGCAATATCCTGGGCAGGG...TGTATCTCCTATTCCAGTATAACACAAAAAGCTTGCAGGCATTAATTTCACAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| CDS-3UTR GCA 90 bp | CCTGTGAAATTAATGCCTGCAAGCTTTTTGTGTTATACTGGAATAGGAGATACAATATATGAGTGTCCGTaGAGGCCAGCTTCAGCAATG | + |
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Preference number: 4 (lower is better) Translates to: PVKLMPASFLCYTGIGDTIYECP*RPASAM Trigger: CATTGCTGAAGCTGGCCTGCACGGACACTCATATAT...TGTATCTCCTATTCCAGTATAACACAAAAAGCTTGCAGGCATTAATTTCACAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| CDS-3UTR CCA 90 bp | CCTGTGAAATTAATGCCTGCAAGCTTTTTGTGTTATACTGGAATAGGAGATACACGTCCTTCAGAACTGTaGGCTCTCAGAGAGAACAAA | + |
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Preference number: 4 (lower is better) Translates to: PVKLMPASFLCYTGIGDTRPSEL*ALRENK Trigger: TTTGTTCTCTCTGAGAGCCCACAGTTCTGAAGGACG...TGTATCTCCTATTCCAGTATAACACAAAAAGCTTGCAGGCATTAATTTCACAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| CDS-3UTR TCA 90 bp | TCCTTCTACCTTATTTTCTTGAGGGAAGACTCCAGTGAAACTTCCACTCACTGTATGGTGTCAGGACATTaGCAAATAAAAGTGTGTGTT | + |
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Preference number: 4 (lower is better) Translates to: SFYLIFLREDSSETSTHCMVSGH*QIKVCV Trigger: AACACACACTTTTATTTGTCAATGTCCTGACACCAT...ACAGTGAGTGGAAGTTTCACTGGAGTCTTCCCTCAAGAAAATAAGGTAGAAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| CDS-3UTR GCA 90 bp | TCCTTCTACCTTATTTTCTTGAGGGAAGACTCCAGTGAAACTTCCACTCACTGTCCACATAAAGGCAGCTaGAATGTGAATATAACTTGT | + |
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Preference number: 4 (lower is better) Translates to: SFYLIFLREDSSETSTHCPHKGS*NVNITC Trigger: ACAAGTTATATTCACATTGCAGCTGCCTTTATGTGG...ACAGTGAGTGGAAGTTTCACTGGAGTCTTCCCTCAAGAAAATAAGGTAGAAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| CDS-3UTR GCA 90 bp | TCCTTCTACCTTATTTTCTTGAGGGAAGACTCCAGTGAAACTTCCACTCACTGTTTTCTCAAAGGAAAATaGAGATGTATCCCGTGCATA | + |
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Preference number: 4 (lower is better) Translates to: SFYLIFLREDSSETSTHCFLKGK*RCIPCI Trigger: TATGCACGGGATACATCTGCATTTTCCTTTGAGAAA...ACAGTGAGTGGAAGTTTCACTGGAGTCTTCCCTCAAGAAAATAAGGTAGAAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| CDS-3UTR CCA 90 bp | TCCTTCTACCTTATTTTCTTGAGGGAAGACTCCAGTGAAACTTCCACTCACTGTTATTTTCTCAACTATTaGGTTCTGAGAAAGCCCCAA | + |
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Preference number: 4 (lower is better) Translates to: SFYLIFLREDSSETSTHCYFLNY*VLRKPQ Trigger: TTGGGGCTTTCTCAGAACCCAATAGTTGAGAAAATA...ACAGTGAGTGGAAGTTTCACTGGAGTCTTCCCTCAAGAAAATAAGGTAGAAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| CDS-3UTR TCA 90 bp | CCTGTGAAATTAATGCCTGCAAGCTTTTTGTGTTATACTGGAATAGGAGATACATCAACTATTGGGTTCTaGGAAAGCCCCAAGATTATG | + |
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Preference number: 4 (lower is better) Translates to: PVKLMPASFLCYTGIGDTSTIGF*ESPKIM Trigger: CATAATCTTGGGGCTTTCTCAGAACCCAATAGTTGA...TGTATCTCCTATTCCAGTATAACACAAAAAGCTTGCAGGCATTAATTTCACAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| CDS-3UTR GCA 90 bp | CCTGTGAAATTAATGCCTGCAAGCTTTTTGTGTTATACTGGAATAGGAGATACAAAAACAGTTGCATCATaGAACAGCCAAAGGAGATGG | + |
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Preference number: 4 (lower is better) Translates to: PVKLMPASFLCYTGIGDTKTVAS*NSQRRW Trigger: CCATCTCCTTTGGCTGTTGCATGATGCAACTGTTTT...TGTATCTCCTATTCCAGTATAACACAAAAAGCTTGCAGGCATTAATTTCACAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| CDS-3UTR GCA 90 bp | CCTGTGAAATTAATGCCTGCAAGCTTTTTGTGTTATACTGGAATAGGAGATACATGGACTGAAAACAGTTaGATCATGCAACAGCCAAAG | + |
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Preference number: 4 (lower is better) Translates to: PVKLMPASFLCYTGIGDTWTENS*IMQQPK Trigger: CTTTGGCTGTTGCATGATGCAACTGTTTTCAGTCCA...TGTATCTCCTATTCCAGTATAACACAAAAAGCTTGCAGGCATTAATTTCACAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| 3UTR CAA 72 bp | TTGGTATTTCTCTACATAATCAATTCCCAGTGCTCATaGGAGTGGGATAGTCACATCATCCAAGAGAAATTC | + |
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Preference number: 4 (lower is better) Translates to: LVFLYIINSQCS*EWDSHIIQEKF Trigger: GAATTTCTCTTGGATGATGTGACTATCCCACTCCAATGAGCACTGGGAATTGATTATGTAGAGAAATACCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| CDS-3UTR TCA 90 bp | CCTGTGAAATTAATGCCTGCAAGCTTTTTGTGTTATACTGGAATAGGAGATACAATGGTGTCAGGACATTaGCAAATAAAAGTGTGTGTT | + |
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Preference number: 4 (lower is better) Translates to: PVKLMPASFLCYTGIGDTMVSGH*QIKVCV Trigger: AACACACACTTTTATTTGTCAATGTCCTGACACCAT...TGTATCTCCTATTCCAGTATAACACAAAAAGCTTGCAGGCATTAATTTCACAGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| CDS-3UTR GCA 90 bp | CCTGTGAAATTAATGCCTGCAAGCTTTTTGTGTTATACTGGAATAGGAGATACAGATAGCACCGCTGTTTaGAAATACCAAAAGAACAAA | + |
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Preference number: 4 (lower is better) Translates to: PVKLMPASFLCYTGIGDTDSTAV*KYQKNK Trigger: TTTGTTCTTTTGGTATTTGCAAACAGCGGTGCTATC...TGTATCTCCTATTCCAGTATAACACAAAAAGCTTGCAGGCATTAATTTCACAGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| CDS-3UTR GCA 90 bp | CCTGTGAAATTAATGCCTGCAAGCTTTTTGTGTTATACTGGAATAGGAGATACATTTCTCAAAGGAAAATaGAGATGTATCCCGTGCATA | + |
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Preference number: 4 (lower is better) Translates to: PVKLMPASFLCYTGIGDTFLKGK*RCIPCI Trigger: TATGCACGGGATACATCTGCATTTTCCTTTGAGAAA...TGTATCTCCTATTCCAGTATAACACAAAAAGCTTGCAGGCATTAATTTCACAGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| CDS-3UTR CCA 90 bp | CCTGTGAAATTAATGCCTGCAAGCTTTTTGTGTTATACTGGAATAGGAGATACATATTTTCTCAACTATTaGGTTCTGAGAAAGCCCCAA | + |
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Preference number: 4 (lower is better) Translates to: PVKLMPASFLCYTGIGDTYFLNY*VLRKPQ Trigger: TTGGGGCTTTCTCAGAACCCAATAGTTGAGAAAATA...TGTATCTCCTATTCCAGTATAACACAAAAAGCTTGCAGGCATTAATTTCACAGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| 3UTR CAA 72 bp | CATCATCCAAGAGAAATTCCAGCTGTTCTCATGTACTaGATCTGTCATGAAATTAAAGAAGCGACTGATTTT | + |
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Preference number: 4 (lower is better) Translates to: HHPREIPAVLMY*ICHEIKEATDF Trigger: AAAATCAGTCGCTTCTTTAATTTCATGACAGATCAAGTACATGAGAACAGCTGGAATTTCTCTTGGATGATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| 3UTR CAA 72 bp | GGGAATTTTCATGTGTCTTCTGTAGCTCCATGTGTATaGCTTCTGGCAGTTAAAATCAATGTGAAACAAATA | + |
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Preference number: 4 (lower is better) Translates to: GNFHVSSVAPCV*LLAVKINVKQI Trigger: TATTTGTTTCACATTGATTTTAACTGCCAGAAGCAATACACATGGAGCTACAGAAGACACATGAAAATTCCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| CDS-3UTR CAA 90 bp | GTGTGCACAGAGCAAAACACTTTCTTAGGAAAAGGGACTACACCGAGAGGATTCCCCCTGCCCAGGATATaGCTACCAAAATGCTACAGA | + |
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Preference number: 5 (lower is better) Translates to: VCTEQNTFLGKGTTPRGFPLPRI*LPKCYR Trigger: TCTGTAGCATTTTGGTAGCAATATCCTGGGCAGGGG...GAATCCTCTCGGTGTAGTCCCTTTTCCTAAGAAAGTGTTTTGCTCTGTGCACAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| CDS-3UTR CAA 90 bp | TCCTTCTACCTTATTTTCTTGAGGGAAGACTCCAGTGAAACTTCCACTCACTGTCCCCTGCCCAGGATATaGCTACCAAAATGCTACAGA | + |
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Preference number: 5 (lower is better) Translates to: SFYLIFLREDSSETSTHCPLPRI*LPKCYR Trigger: TCTGTAGCATTTTGGTAGCAATATCCTGGGCAGGGG...ACAGTGAGTGGAAGTTTCACTGGAGTCTTCCCTCAAGAAAATAAGGTAGAAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| CDS-3UTR CAA 90 bp | GTGTGCACAGAGCAAAACACTTTCTTAGGAAAAGGGACTACACCGAGAGGATTCGTATTTTCTCAACTATaGGGTTCTGAGAAAGCCCCA | + |
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Preference number: 5 (lower is better) Translates to: VCTEQNTFLGKGTTPRGFVFSQL*GSEKAP Trigger: TGGGGCTTTCTCAGAACCCAATAGTTGAGAAAATAC...GAATCCTCTCGGTGTAGTCCCTTTTCCTAAGAAAGTGTTTTGCTCTGTGCACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| CDS GCA 90 bp | CACCGCTGTTTGCAAATACCAAAAGAACAAATATATGAGTGTCCGTaGAGGCCAGCTTCAGCAATGGAAACAAGTCACATGTGTAATGAT | + |
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Preference number: 5 (lower is better) Translates to: HRCLQIPKEQIYECP*RPASAMETSHMCND Trigger: ATCATTACACATGTGACTTGTTTCCATTGCTGAAGCTGGCCTGCACGGACACTCATATATTTGTTCTTTTGGTATTTGCAAACAGCGGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099798.2 ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| CDS GCA 90 bp | AACAAGCAACAAGGAGAAGATAATGATGCAGATAGCACCGCTGTTTaGAAATACCAAAAGAACAAATATATGAGTGTCCGTGCAGGCCAG | + |
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Preference number: 5 (lower is better) Translates to: NKQQGEDNDADSTAV*KYQKNKYMSVRAGQ Trigger: CTGGCCTGCACGGACACTCATATATTTGTTCTTTTGGTATTTGCAAACAGCGGTGCTATCTGCATCATTATCTTCTCCTTGTTGCTTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099798.2 ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| CDS-3UTR CAA 90 bp | GTGTGCACAGAGCAAAACACTTTCTTAGGAAAAGGGACTACACCGAGAGGATTCAATGGTGTCAGGACATaGACAAATAAAAGTGTGTGT | + |
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Preference number: 5 (lower is better) Translates to: VCTEQNTFLGKGTTPRGFNGVRT*TNKSVC Trigger: ACACACACTTTTATTTGTCAATGTCCTGACACCATT...GAATCCTCTCGGTGTAGTCCCTTTTCCTAAGAAAGTGTTTTGCTCTGTGCACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| CDS-3UTR CAA 90 bp | TCCTTCTACCTTATTTTCTTGAGGGAAGACTCCAGTGAAACTTCCACTCACTGTAATGGTGTCAGGACATaGACAAATAAAAGTGTGTGT | + |
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Preference number: 5 (lower is better) Translates to: SFYLIFLREDSSETSTHCNGVRT*TNKSVC Trigger: ACACACACTTTTATTTGTCAATGTCCTGACACCATT...ACAGTGAGTGGAAGTTTCACTGGAGTCTTCCCTCAAGAAAATAAGGTAGAAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| CDS-3UTR CAA 90 bp | TCCTTCTACCTTATTTTCTTGAGGGAAGACTCCAGTGAAACTTCCACTCACTGTATCATTTTCAGTCTCTaGCACATTTTTCTGATGGCA | + |
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Preference number: 5 (lower is better) Translates to: SFYLIFLREDSSETSTHCIIFSL*HIFLMA Trigger: TGCCATCAGAAAAATGTGCAAGAGACTGAAAATGAT...ACAGTGAGTGGAAGTTTCACTGGAGTCTTCCCTCAAGAAAATAAGGTAGAAGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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| CDS-3UTR CAA 90 bp | CCTGTGAAATTAATGCCTGCAAGCTTTTTGTGTTATACTGGAATAGGAGATACAATCATTTTCAGTCTCTaGCACATTTTTCTGATGGCA | + |
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Preference number: 5 (lower is better) Translates to: PVKLMPASFLCYTGIGDTIIFSL*HIFLMA Trigger: TGCCATCAGAAAAATGTGCAAGAGACTGAAAATGAT...TGTATCTCCTATTCCAGTATAACACAAAAAGCTTGCAGGCATTAATTTCACAGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000213609.3 ENSMUST00000215048.2 ENSMUST00000215054.2 |
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