RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OLFR1217 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000101391

Ensembl transcript IDs: ENSMUST00000099799.5, ENSMUST00000213669.2, ENSMUST00000214022.3, ENSMUST00000216592.2

Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AAAGGTCACCAACGGACTGTTCCAAGCTGGACCTCCTCCCCAAGCTaGCTAAGTCCAGATGAAGGTCACCAATGGACTGTTTCAGAATTA +
Preference number: 1 (lower is better)
Translates to: KGHQRTVPSWTSSPS*LSPDEGHQWTVSEL
Trigger: TAATTCTGAAACAGTCCATTGGTGACCTTCATCTGGACTTAGTCAGCTTGGGGAGGAGGTCCAGCTTGGAACAGTCCGTTGGTGACCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000213669.2
ENSMUST00000214022.3
ENSMUST00000216592.2
3UTR GCA 90 bp ACTATTCTATGTCTACCAGGTGCTTACTTACTTCTCCTTCAGTCCTaGCCCCTTCTTCTAGGTCCCTGTTTCCTTAAGTCCTCTTCTCCA +
Preference number: 1 (lower is better)
Translates to: TILCLPGAYLLLLQS*PLLLGPCFLKSSSP
Trigger: TGGAGAAGAGGACTTAAGGAAACAGGGACCTAGAAGAAGGGGGCAGGACTGAAGGAGAAGTAAGTAAGCACCTGGTAGACATAGAATAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000213669.2
ENSMUST00000214022.3
ENSMUST00000216592.2
3UTR GCA 90 bp GGCTGTCTTTTATCTCTTACTATTTCCCAGAATCATCTCTCTTCCTaGCAGTGTCCCAGTTCCTATTTCCTGCCTCAGTTCATTGGCCAT +
Preference number: 1 (lower is better)
Translates to: GCLLSLTISQNHLSS*QCPSSYFLPQFIGH
Trigger: ATGGCCAATGAACTGAGGCAGGAAATAGGAACTGGGACACTGGCAGGAAGAGAGATGATTCTGGGAAATAGTAAGAGATAAAAGACAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000213669.2
ENSMUST00000214022.3
ENSMUST00000216592.2
3UTR-3UTR GCA 90 bp CAAAGGTCACCAACGGACTGTTCCAAGCTGGACCTCCTCCCCAAGCTGACTAAGCTTCTCCTTCAGTCCTaGCCCCTTCTTCTAGGTCCC +
Preference number: 2 (lower is better)
Translates to: QRSPTDCSKLDLLPKLTKLLLQS*PLLLGP
Trigger: GGGACCTAGAAGAAGGGGGCAGGACTGAAGGAGAAG...CTTAGTCAGCTTGGGGAGGAGGTCCAGCTTGGAACAGTCCGTTGGTGACCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000213669.2
ENSMUST00000214022.3
ENSMUST00000216592.2
3UTR-3UTR GCA 90 bp CAAAGGTCACCAACGGACTGTTCCAAGCTGGACCTCCTCCCCAAGCTGACTAAGTCCATGTCGTTTCTGTaGTTGGTCTCCGTTCCTCTC +
Preference number: 2 (lower is better)
Translates to: QRSPTDCSKLDLLPKLTKSMSFL*LVSVPL
Trigger: GAGAGGAACGGAGACCAAGCACAGAAACGACATGGA...CTTAGTCAGCTTGGGGAGGAGGTCCAGCTTGGAACAGTCCGTTGGTGACCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000213669.2
ENSMUST00000214022.3
ENSMUST00000216592.2
3UTR-3UTR GCA 90 bp CAAAGGTCACCAACGGACTGTTCCAAGCTGGACCTCCTCCCCAAGCTGACTAAGTGTTTGCATAGCAAGTaGTCCTCTCCACTGAACTGG +
Preference number: 2 (lower is better)
Translates to: QRSPTDCSKLDLLPKLTKCLHSK*SSPLNW
Trigger: CCAGTTCAGTGGAGAGGAGCACTTGCTATGCAAACA...CTTAGTCAGCTTGGGGAGGAGGTCCAGCTTGGAACAGTCCGTTGGTGACCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000213669.2
ENSMUST00000214022.3
ENSMUST00000216592.2
3UTR-3UTR GCA 90 bp CAAAGGTCACCAACGGACTGTTCCAAGCTGGACCTCCTCCCCAAGCTGACTAAGCCAGTTCCTATTTCCTaGCTCAGTTCATTGGCCATA +
Preference number: 2 (lower is better)
Translates to: QRSPTDCSKLDLLPKLTKPVPIS*LSSLAI
Trigger: TATGGCCAATGAACTGAGGCAGGAAATAGGAACTGG...CTTAGTCAGCTTGGGGAGGAGGTCCAGCTTGGAACAGTCCGTTGGTGACCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000213669.2
ENSMUST00000214022.3
ENSMUST00000216592.2
3UTR-3UTR TCA 90 bp CAAAGGTCACCAACGGACTGTTCCAAGCTGGACCTCCTCCCCAAGCTGACTAAGAACACAATGAGACCTTaGCAAGATTCAGATTTGGCT +
Preference number: 2 (lower is better)
Translates to: QRSPTDCSKLDLLPKLTKNTMRP*QDSDLA
Trigger: AGCCAAATCTGAATCTTGTCAAGGTCTCATTGTGTT...CTTAGTCAGCTTGGGGAGGAGGTCCAGCTTGGAACAGTCCGTTGGTGACCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000213669.2
ENSMUST00000214022.3
ENSMUST00000216592.2
3UTR-3UTR GCA 90 bp CCCTCGAGACCCACGAATAACTGGACCTGCTGGACGGGTCACATTCAAATAGTTAATCATCTCTCTTCCTaGCAGTGTCCCAGTTCCTAT +
Preference number: 2 (lower is better)
Translates to: PSRPTNNWTCWTGHIQIVNHLSS*QCPSSY
Trigger: ATAGGAACTGGGACACTGGCAGGAAGAGAGATGATT...AACTATTTGAATGTGACCCGTCCAGCAGGTCCAGTTATTCGTGGGTCTCGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000213669.2
ENSMUST00000214022.3
ENSMUST00000216592.2
3UTR-3UTR GCA 90 bp CAAAGGTCACCAACGGACTGTTCCAAGCTGGACCTCCTCCCCAAGCTGACTAAGTCCACAAACCCTATATaGACCAGCACTGGATTTAAA +
Preference number: 2 (lower is better)
Translates to: QRSPTDCSKLDLLPKLTKSTNPI*TSTGFK
Trigger: TTTAAATCCAGTGCTGGTGCATATAGGGTTTGTGGA...CTTAGTCAGCTTGGGGAGGAGGTCCAGCTTGGAACAGTCCGTTGGTGACCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000213669.2
ENSMUST00000214022.3
ENSMUST00000216592.2
3UTR-3UTR TCA 90 bp CAAAGGTCACCAACGGACTGTTCCAAGCTGGACCTCCTCCCCAAGCTGACTAAGTTGAGGCTCATTCCCTaGCTAGTTCAAAATTATTTC +
Preference number: 2 (lower is better)
Translates to: QRSPTDCSKLDLLPKLTKLRLIP*LVQNYF
Trigger: GAAATAATTTTGAACTAGTCAGGGAATGAGCCTCAA...CTTAGTCAGCTTGGGGAGGAGGTCCAGCTTGGAACAGTCCGTTGGTGACCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000213669.2
ENSMUST00000214022.3
ENSMUST00000216592.2
3UTR-3UTR TCA 90 bp TTACCACTGCCCCCTCCCCTGCCCTTCTGCATAAGGGTTATTTCCACTTTAATAAACACAATGAGACCTTaGCAAGATTCAGATTTGGCT +
Preference number: 2 (lower is better)
Translates to: LPLPPPLPFCIRVISTLINTMRP*QDSDLA
Trigger: AGCCAAATCTGAATCTTGTCAAGGTCTCATTGTGTT...TATTAAAGTGGAAATAACCCTTATGCAGAAGGGCAGGGGAGGGGGCAGTGGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000213669.2
ENSMUST00000214022.3
ENSMUST00000216592.2
3UTR-3UTR GCA 90 bp CTCTCCCCTGGGCTGTCTTTTATCTCTTACTATTTCCCAGAATCATCTCTCTTCCCAGTTCCTATTTCCTaGCTCAGTTCATTGGCCATA +
Preference number: 2 (lower is better)
Translates to: LSPGLSFISYYFPESSLFPVPIS*LSSLAI
Trigger: TATGGCCAATGAACTGAGGCAGGAAATAGGAACTGG...GAAGAGAGATGATTCTGGGAAATAGTAAGAGATAAAAGACAGCCCAGGGGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000213669.2
ENSMUST00000214022.3
ENSMUST00000216592.2
3UTR-3UTR GCA 90 bp CAGATATCATATCCACAAGATGTACTTTTAGATATCATACCTCTCCTTGTAGTCTCCATGTCGTTTCTGTaGTTGGTCTCCGTTCCTCTC +
Preference number: 2 (lower is better)
Translates to: QISYPQDVLLDIIPLLVVSMSFL*LVSVPL
Trigger: GAGAGGAACGGAGACCAAGCACAGAAACGACATGGA...GACTACAAGGAGAGGTATGATATCTAAAAGTACATCTTGTGGATATGATATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000213669.2
ENSMUST00000214022.3
ENSMUST00000216592.2
3UTR-3UTR GCA 90 bp CAGATATCATATCCACAAGATGTACTTTTAGATATCATACCTCTCCTTGTAGTCAATCATCTCTCTTCCTaGCAGTGTCCCAGTTCCTAT +
Preference number: 2 (lower is better)
Translates to: QISYPQDVLLDIIPLLVVNHLSS*QCPSSY
Trigger: ATAGGAACTGGGACACTGGCAGGAAGAGAGATGATT...GACTACAAGGAGAGGTATGATATCTAAAAGTACATCTTGTGGATATGATATCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000213669.2
ENSMUST00000214022.3
ENSMUST00000216592.2
3UTR-3UTR GCA 90 bp CAGATATCATATCCACAAGATGTACTTTTAGATATCATACCTCTCCTTGTAGTCTCTATGTCTACCAGGTaGTTACTTACTTCTCCTTCA +
Preference number: 2 (lower is better)
Translates to: QISYPQDVLLDIIPLLVVSMSTR*LLTSPS
Trigger: TGAAGGAGAAGTAAGTAAGCACCTGGTAGACATAGA...GACTACAAGGAGAGGTATGATATCTAAAAGTACATCTTGTGGATATGATATCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000213669.2
ENSMUST00000214022.3
ENSMUST00000216592.2
3UTR-3UTR GCA 90 bp CAGATATCATATCCACAAGATGTACTTTTAGATATCATACCTCTCCTTGTAGTCTCCACAAACCCTATATaGACCAGCACTGGATTTAAA +
Preference number: 2 (lower is better)
Translates to: QISYPQDVLLDIIPLLVVSTNPI*TSTGFK
Trigger: TTTAAATCCAGTGCTGGTGCATATAGGGTTTGTGGA...GACTACAAGGAGAGGTATGATATCTAAAAGTACATCTTGTGGATATGATATCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000213669.2
ENSMUST00000214022.3
ENSMUST00000216592.2
3UTR-3UTR CAA 90 bp CAAAGGTCACCAACGGACTGTTCCAAGCTGGACCTCCTCCCCAAGCTGACTAAGATGTCGTTTCTGTGCTaGGTCTCCGTTCCTCTCTCA +
Preference number: 3 (lower is better)
Translates to: QRSPTDCSKLDLLPKLTKMSFLC*VSVPLS
Trigger: TGAGAGAGGAACGGAGACCAAGCACAGAAACGACAT...CTTAGTCAGCTTGGGGAGGAGGTCCAGCTTGGAACAGTCCGTTGGTGACCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000213669.2
ENSMUST00000214022.3
ENSMUST00000216592.2
3UTR TCA 72 bp CAACGGACTGTTCCAAGCTGGACCTCCTCCCCAAGCTaGCTAAGTCCAGATGAAGGTCACCAATGGACTGTT +
Preference number: 3 (lower is better)
Translates to: QRTVPSWTSSPS*LSPDEGHQWTV
Trigger: AACAGTCCATTGGTGACCTTCATCTGGACTTAGTCAGCTTGGGGAGGAGGTCCAGCTTGGAACAGTCCGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000213669.2
ENSMUST00000214022.3
ENSMUST00000216592.2
3UTR-3UTR CAA 90 bp CAAAGGTCACCAACGGACTGTTCCAAGCTGGACCTCCTCCCCAAGCTGACTAAGGCATGTTTGTTTGTATaGGTGTGGGAAGTGAGGTGG +
Preference number: 3 (lower is better)
Translates to: QRSPTDCSKLDLLPKLTKACLFV*VWEVRW
Trigger: CCACCTCACTTCCCACACCAATACAAACAAACATGC...CTTAGTCAGCTTGGGGAGGAGGTCCAGCTTGGAACAGTCCGTTGGTGACCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000213669.2
ENSMUST00000214022.3
ENSMUST00000216592.2
3UTR-3UTR CAA 90 bp CAAAGGTCACCAACGGACTGTTCCAAGCTGGACCTCCTCCCCAAGCTGACTAAGGAACACAATGAGACCTaGACAAGATTCAGATTTGGC +
Preference number: 3 (lower is better)
Translates to: QRSPTDCSKLDLLPKLTKEHNET*TRFRFG
Trigger: GCCAAATCTGAATCTTGTCAAGGTCTCATTGTGTTC...CTTAGTCAGCTTGGGGAGGAGGTCCAGCTTGGAACAGTCCGTTGGTGACCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000213669.2
ENSMUST00000214022.3
ENSMUST00000216592.2
3UTR GCA 72 bp TTATCTCTTACTATTTCCCAGAATCATCTCTCTTCCTaGCAGTGTCCCAGTTCCTATTTCCTGCCTCAGTTC +
Preference number: 3 (lower is better)
Translates to: LSLTISQNHLSS*QCPSSYFLPQF
Trigger: GAACTGAGGCAGGAAATAGGAACTGGGACACTGGCAGGAAGAGAGATGATTCTGGGAAATAGTAAGAGATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000213669.2
ENSMUST00000214022.3
ENSMUST00000216592.2
3UTR TCA 72 bp ATGCCTGTTATAGCTCATGTGAATACATGTGAAGTGTaGATAGTATTTGTGCCTCTTAACACTCGGGCAGAA +
Preference number: 3 (lower is better)
Translates to: MPVIAHVNTCEV*IVFVPLNTRAE
Trigger: TTCTGCCCGAGTGTTAAGAGGCACAAATACTATTCACACTTCACATGTATTCACATGAGCTATAACAGGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000213669.2
ENSMUST00000214022.3
ENSMUST00000216592.2
3UTR TCA 72 bp AATTGTGATGTTTGCATAGCAAGTGCTCCTCTCCACTaGACTGGATACTGTAAAATTTATCAGAAACTACTA +
Preference number: 3 (lower is better)
Translates to: NCDVCIASAPLH*TGYCKIYQKLL
Trigger: TAGTAGTTTCTGATAAATTTTACAGTATCCAGTTCAGTGGAGAGGAGCACTTGCTATGCAAACATCACAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000213669.2
ENSMUST00000214022.3
ENSMUST00000216592.2
CDS-3UTR TCA 90 bp CAAAGGTCACCAACGGACTGTTCCAAGCTGGACCTCCTCCCCAAGCTGACTAAGAGAGCCTCTGGGTCATaGTGGAAGAGTAGTGAAGAG +
Preference number: 4 (lower is better)
Translates to: QRSPTDCSKLDLLPKLTKRASGS*WKSSEE
Trigger: CTCTTCACTACTCTTCCATCATGACCCAGAGGCTCT...CTTAGTCAGCTTGGGGAGGAGGTCCAGCTTGGAACAGTCCGTTGGTGACCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000213669.2
ENSMUST00000214022.3
ENSMUST00000216592.2
CDS-3UTR CCA 90 bp CTTCCTGCCAGTGTCCCAGTTCCTATTTCCTGCCTCAGTTCATTGGCCATATACCCAAGAAGAAGTACATaGGGGAGCCCAGCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: LPASVPVPISCLSSLAIYPRRST*GSPAVQ
Trigger: CTGCACTGCTGGGCTCCCCCATGTACTTCTTCTTGG...GTATATGGCCAATGAACTGAGGCAGGAAATAGGAACTGGGACACTGGCAGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000099799.5
ENSMUST00000213669.2
ENSMUST00000214022.3
ENSMUST00000216592.2
CDS-3UTR TCA 90 bp CAAAGGTCACCAACGGACTGTTCCAAGCTGGACCTCCTCCCCAAGCTGACTAAGCACATTCAGGTTCTGTaGAAGTCCCAGGAGTATGAA +
Preference number: 4 (lower is better)
Translates to: QRSPTDCSKLDLLPKLTKHIQVL*KSQEYE
Trigger: TTCATACTCCTGGGACTTTCACAGAACCTGAATGTG...CTTAGTCAGCTTGGGGAGGAGGTCCAGCTTGGAACAGTCCGTTGGTGACCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000213669.2
ENSMUST00000214022.3
ENSMUST00000216592.2
CDS-3UTR CCA 90 bp TCTTCCTGCCAGTGTCCCAGTTCCTATTTCCTGCCTCAGTTCATTGGCCATATACCAAGAAGAAGTACATaGGGGAGCCCAGCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: SSCQCPSSYFLPQFIGHIPRRST*GSPAVQ
Trigger: CTGCACTGCTGGGCTCCCCCATGTACTTCTTCTTGG...TATATGGCCAATGAACTGAGGCAGGAAATAGGAACTGGGACACTGGCAGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000099799.5
ENSMUST00000213669.2
ENSMUST00000214022.3
ENSMUST00000216592.2
CDS-3UTR TCA 90 bp CTTCCTGCCAGTGTCCCAGTTCCTATTTCCTGCCTCAGTTCATTGGCCATATACGTGCAGGGCTGTAGATaGTGGTCACCACAATCATCA +
Preference number: 4 (lower is better)
Translates to: LPASVPVPISCLSSLAIYVQGCR*WSPQSS
Trigger: TGATGATTGTGGTGACCATCATCTACAGCCCTGCAC...GTATATGGCCAATGAACTGAGGCAGGAAATAGGAACTGGGACACTGGCAGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000099799.5
ENSMUST00000213669.2
ENSMUST00000214022.3
ENSMUST00000216592.2
CDS-3UTR CCA 90 bp CTTCCTGCCAGTGTCCCAGTTCCTATTTCCTGCCTCAGTTCATTGGCCATATACCGCCCTTCAGAACTCTaGGCTCTCAGAGAAAACAAG +
Preference number: 4 (lower is better)
Translates to: LPASVPVPISCLSSLAIYRPSEL*ALRENK
Trigger: CTTGTTTTCTCTGAGAGCCCAGAGTTCTGAAGGGCG...GTATATGGCCAATGAACTGAGGCAGGAAATAGGAACTGGGACACTGGCAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000099799.5
ENSMUST00000213669.2
ENSMUST00000214022.3
ENSMUST00000216592.2
CDS-3UTR TCA 90 bp TCTTCCTGCCAGTGTCCCAGTTCCTATTTCCTGCCTCAGTTCATTGGCCATATAAGAGCCTCTGGGTCATaGTGGAAGAGTAGTGAAGAG +
Preference number: 4 (lower is better)
Translates to: SSCQCPSSYFLPQFIGHIRASGS*WKSSEE
Trigger: CTCTTCACTACTCTTCCATCATGACCCAGAGGCTCT...TATATGGCCAATGAACTGAGGCAGGAAATAGGAACTGGGACACTGGCAGGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000099799.5
ENSMUST00000213669.2
ENSMUST00000214022.3
ENSMUST00000216592.2
CDS-3UTR TCA 90 bp CTTCCTGCCAGTGTCCCAGTTCCTATTTCCTGCCTCAGTTCATTGGCCATATACCACATTCAGGTTCTGTaGAAGTCCCAGGAGTATGAA +
Preference number: 4 (lower is better)
Translates to: LPASVPVPISCLSSLAIYHIQVL*KSQEYE
Trigger: TTCATACTCCTGGGACTTTCACAGAACCTGAATGTG...GTATATGGCCAATGAACTGAGGCAGGAAATAGGAACTGGGACACTGGCAGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000099799.5
ENSMUST00000213669.2
ENSMUST00000214022.3
ENSMUST00000216592.2
CDS-3UTR GCA 90 bp CTTCCTGCCAGTGTCCCAGTTCCTATTTCCTGCCTCAGTTCATTGGCCATATACAGTAGAAGAAGTGCATaGATCCAGGAAGGACAGGAA +
Preference number: 4 (lower is better)
Translates to: LPASVPVPISCLSSLAIYSRRSA*IQEGQE
Trigger: TTCCTGTCCTTCCTGGATGCATGCACTTCTTCTACT...GTATATGGCCAATGAACTGAGGCAGGAAATAGGAACTGGGACACTGGCAGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000099799.5
ENSMUST00000213669.2
ENSMUST00000214022.3
ENSMUST00000216592.2
CDS-3UTR GCA 90 bp TCTTCCTGCCAGTGTCCCAGTTCCTATTTCCTGCCTCAGTTCATTGGCCATATACAAGACAATCACTTCTaGCCCAGTGAAGAAGTGGAC +
Preference number: 4 (lower is better)
Translates to: SSCQCPSSYFLPQFIGHIQDNHF*PSEEVD
Trigger: GTCCACTTCTTCACTGGGGCAGAAGTGATTGTCTTG...TATATGGCCAATGAACTGAGGCAGGAAATAGGAACTGGGACACTGGCAGGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000099799.5
ENSMUST00000213669.2
ENSMUST00000214022.3
ENSMUST00000216592.2
CDS-3UTR TCA 90 bp TCTTCCTGCCAGTGTCCCAGTTCCTATTTCCTGCCTCAGTTCATTGGCCATATACACATTCAGGTTCTGTaGAAGTCCCAGGAGTATGAA +
Preference number: 4 (lower is better)
Translates to: SSCQCPSSYFLPQFIGHIHIQVL*KSQEYE
Trigger: TTCATACTCCTGGGACTTTCACAGAACCTGAATGTG...TATATGGCCAATGAACTGAGGCAGGAAATAGGAACTGGGACACTGGCAGGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000099799.5
ENSMUST00000213669.2
ENSMUST00000214022.3
ENSMUST00000216592.2
CDS-3UTR GCA 90 bp TCTTCCTGCCAGTGTCCCAGTTCCTATTTCCTGCCTCAGTTCATTGGCCATATAAGTAGAAGAAGTGCATaGATCCAGGAAGGACAGGAA +
Preference number: 4 (lower is better)
Translates to: SSCQCPSSYFLPQFIGHISRRSA*IQEGQE
Trigger: TTCCTGTCCTTCCTGGATGCATGCACTTCTTCTACT...TATATGGCCAATGAACTGAGGCAGGAAATAGGAACTGGGACACTGGCAGGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000099799.5
ENSMUST00000213669.2
ENSMUST00000214022.3
ENSMUST00000216592.2
CDS-3UTR GCA 90 bp CTTCCTGCCAGTGTCCCAGTTCCTATTTCCTGCCTCAGTTCATTGGCCATATACAAATGTGTGTGTCTGTaGAGGCAAGCTTCAGTAATG +
Preference number: 4 (lower is better)
Translates to: LPASVPVPISCLSSLAIYKCVCL*RQASVM
Trigger: CATTACTGAAGCTTGCCTGCACAGACACACACATTT...GTATATGGCCAATGAACTGAGGCAGGAAATAGGAACTGGGACACTGGCAGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000099799.5
ENSMUST00000213669.2
ENSMUST00000214022.3
ENSMUST00000216592.2
CDS-3UTR CCA 90 bp CTTCCTGCCAGTGTCCCAGTTCCTATTTCCTGCCTCAGTTCATTGGCCATATACCATAGGATTGAGCAGTaGTGTCAGGACATTGACAAA +
Preference number: 4 (lower is better)
Translates to: LPASVPVPISCLSSLAIYHRIEQ*CQDIDK
Trigger: TTTGTCAATGTCCTGACACCACTGCTCAATCCTATG...GTATATGGCCAATGAACTGAGGCAGGAAATAGGAACTGGGACACTGGCAGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000099799.5
ENSMUST00000213669.2
ENSMUST00000214022.3
ENSMUST00000216592.2
CDS-3UTR GCA 90 bp CTCTCCCCTGGGCTGTCTTTTATCTCTTACTATTTCCCAGAATCATCTCTCTTCCAAGACAATCACTTCTaGCCCAGTGAAGAAGTGGAC +
Preference number: 4 (lower is better)
Translates to: LSPGLSFISYYFPESSLFQDNHF*PSEEVD
Trigger: GTCCACTTCTTCACTGGGGCAGAAGTGATTGTCTTG...GAAGAGAGATGATTCTGGGAAATAGTAAGAGATAAAAGACAGCCCAGGGGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000213669.2
ENSMUST00000214022.3
ENSMUST00000216592.2
CDS-3UTR GCA 90 bp TCTTCCTGCCAGTGTCCCAGTTCCTATTTCCTGCCTCAGTTCATTGGCCATATAAAATGTGTGTGTCTGTaGAGGCAAGCTTCAGTAATG +
Preference number: 4 (lower is better)
Translates to: SSCQCPSSYFLPQFIGHIKCVCL*RQASVM
Trigger: CATTACTGAAGCTTGCCTGCACAGACACACACATTT...TATATGGCCAATGAACTGAGGCAGGAAATAGGAACTGGGACACTGGCAGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000099799.5
ENSMUST00000213669.2
ENSMUST00000214022.3
ENSMUST00000216592.2
CDS-3UTR CCA 90 bp TCTTCCTGCCAGTGTCCCAGTTCCTATTTCCTGCCTCAGTTCATTGGCCATATACATAGGATTGAGCAGTaGTGTCAGGACATTGACAAA +
Preference number: 4 (lower is better)
Translates to: SSCQCPSSYFLPQFIGHIHRIEQ*CQDIDK
Trigger: TTTGTCAATGTCCTGACACCACTGCTCAATCCTATG...TATATGGCCAATGAACTGAGGCAGGAAATAGGAACTGGGACACTGGCAGGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000099799.5
ENSMUST00000213669.2
ENSMUST00000214022.3
ENSMUST00000216592.2
CDS-3UTR CCA 90 bp TTACCACTGCCCCCTCCCCTGCCCTTCTGCATAAGGGTTATTTCCACTTTAATACATAGGATTGAGCAGTaGTGTCAGGACATTGACAAA +
Preference number: 4 (lower is better)
Translates to: LPLPPPLPFCIRVISTLIHRIEQ*CQDIDK
Trigger: TTTGTCAATGTCCTGACACCACTGCTCAATCCTATG...TATTAAAGTGGAAATAACCCTTATGCAGAAGGGCAGGGGAGGGGGCAGTGGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000213669.2
ENSMUST00000214022.3
ENSMUST00000216592.2
CDS-3UTR TCA 90 bp TCAGCTCTCCCCTGGGCTGTCTTTTATCTCTTACTATTTCCCAGAATCATCTCTCACATTCAGGTTCTGTaGAAGTCCCAGGAGTATGAA +
Preference number: 4 (lower is better)
Translates to: SALPWAVFYLLLFPRIISHIQVL*KSQEYE
Trigger: TTCATACTCCTGGGACTTTCACAGAACCTGAATGTG...AGAGATGATTCTGGGAAATAGTAAGAGATAAAAGACAGCCCAGGGGAGAGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000213669.2
ENSMUST00000214022.3
ENSMUST00000216592.2
CDS-3UTR TCA 90 bp CTTCCTGCCAGTGTCCCAGTTCCTATTTCCTGCCTCAGTTCATTGGCCATATACACATGTAATGATCAATaGCATTGGGTCCACATAAAG +
Preference number: 4 (lower is better)
Translates to: LPASVPVPISCLSSLAIYTCNDQ*HWVHIK
Trigger: CTTTATGTGGACCCAATGTCATTGATCATTACATGT...GTATATGGCCAATGAACTGAGGCAGGAAATAGGAACTGGGACACTGGCAGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000099799.5
ENSMUST00000213669.2
ENSMUST00000214022.3
ENSMUST00000216592.2
CDS-3UTR TCA 90 bp TCTTCCTGCCAGTGTCCCAGTTCCTATTTCCTGCCTCAGTTCATTGGCCATATATCAGAGAAAACAAGATaGCACCATAGGAGACAATCA +
Preference number: 4 (lower is better)
Translates to: SSCQCPSSYFLPQFIGHISEKTR*HHRRQS
Trigger: TGATTGTCTCCTATGGTGTCATCTTGTTTTCTCTGA...TATATGGCCAATGAACTGAGGCAGGAAATAGGAACTGGGACACTGGCAGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000099799.5
ENSMUST00000213669.2
ENSMUST00000214022.3
ENSMUST00000216592.2
CDS-3UTR TCA 90 bp TTACCACTGCCCCCTCCCCTGCCCTTCTGCATAAGGGTTATTTCCACTTTAATATCAGAGAAAACAAGATaGCACCATAGGAGACAATCA +
Preference number: 4 (lower is better)
Translates to: LPLPPPLPFCIRVISTLISEKTR*HHRRQS
Trigger: TGATTGTCTCCTATGGTGTCATCTTGTTTTCTCTGA...TATTAAAGTGGAAATAACCCTTATGCAGAAGGGCAGGGGAGGGGGCAGTGGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000213669.2
ENSMUST00000214022.3
ENSMUST00000216592.2
CDS-3UTR GCA 90 bp CTCTCCCCTGGGCTGTCTTTTATCTCTTACTATTTCCCAGAATCATCTCTCTTCAGTAGAAGAAGTGCATaGATCCAGGAAGGACAGGAA +
Preference number: 4 (lower is better)
Translates to: LSPGLSFISYYFPESSLFSRRSA*IQEGQE
Trigger: TTCCTGTCCTTCCTGGATGCATGCACTTCTTCTACT...GAAGAGAGATGATTCTGGGAAATAGTAAGAGATAAAAGACAGCCCAGGGGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000213669.2
ENSMUST00000214022.3
ENSMUST00000216592.2
CDS-3UTR GCA 90 bp CTTCCTGCCAGTGTCCCAGTTCCTATTTCCTGCCTCAGTTCATTGGCCATATACATTTGTATGATAGAATaGAAGAAACCTCCTGCCCAA +
Preference number: 4 (lower is better)
Translates to: LPASVPVPISCLSSLAIYICMIE*KKPPAQ
Trigger: TTGGGCAGGAGGTTTCTTGCATTCTATCATACAAAT...GTATATGGCCAATGAACTGAGGCAGGAAATAGGAACTGGGACACTGGCAGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000099799.5
ENSMUST00000213669.2
ENSMUST00000214022.3
ENSMUST00000216592.2
CDS-3UTR TCA 90 bp TCTTCCTGCCAGTGTCCCAGTTCCTATTTCCTGCCTCAGTTCATTGGCCATATAACATGTAATGATCAATaGCATTGGGTCCACATAAAG +
Preference number: 4 (lower is better)
Translates to: SSCQCPSSYFLPQFIGHITCNDQ*HWVHIK
Trigger: CTTTATGTGGACCCAATGTCATTGATCATTACATGT...TATATGGCCAATGAACTGAGGCAGGAAATAGGAACTGGGACACTGGCAGGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000099799.5
ENSMUST00000213669.2
ENSMUST00000214022.3
ENSMUST00000216592.2
CDS-3UTR GCA 90 bp CTCTCCCCTGGGCTGTCTTTTATCTCTTACTATTTCCCAGAATCATCTCTCTTCAAATGTGTGTGTCTGTaGAGGCAAGCTTCAGTAATG +
Preference number: 4 (lower is better)
Translates to: LSPGLSFISYYFPESSLFKCVCL*RQASVM
Trigger: CATTACTGAAGCTTGCCTGCACAGACACACACATTT...GAAGAGAGATGATTCTGGGAAATAGTAAGAGATAAAAGACAGCCCAGGGGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000213669.2
ENSMUST00000214022.3
ENSMUST00000216592.2
CDS-3UTR CCA 90 bp CAGATATCATATCCACAAGATGTACTTTTAGATATCATACCTCTCCTTGTAGTCCCAAGAAGAAGTACATaGGGGAGCCCAGCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: QISYPQDVLLDIIPLLVVPRRST*GSPAVQ
Trigger: CTGCACTGCTGGGCTCCCCCATGTACTTCTTCTTGG...GACTACAAGGAGAGGTATGATATCTAAAAGTACATCTTGTGGATATGATATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000213669.2
ENSMUST00000214022.3
ENSMUST00000216592.2
CDS-3UTR CCA 90 bp CTCTCCCCTGGGCTGTCTTTTATCTCTTACTATTTCCCAGAATCATCTCTCTTCCATAGGATTGAGCAGTaGTGTCAGGACATTGACAAA +
Preference number: 4 (lower is better)
Translates to: LSPGLSFISYYFPESSLFHRIEQ*CQDIDK
Trigger: TTTGTCAATGTCCTGACACCACTGCTCAATCCTATG...GAAGAGAGATGATTCTGGGAAATAGTAAGAGATAAAAGACAGCCCAGGGGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000213669.2
ENSMUST00000214022.3
ENSMUST00000216592.2
CDS-3UTR TCA 90 bp TCAGCTCTCCCCTGGGCTGTCTTTTATCTCTTACTATTTCCCAGAATCATCTCTACATGTAATGATCAATaGCATTGGGTCCACATAAAG +
Preference number: 4 (lower is better)
Translates to: SALPWAVFYLLLFPRIISTCNDQ*HWVHIK
Trigger: CTTTATGTGGACCCAATGTCATTGATCATTACATGT...AGAGATGATTCTGGGAAATAGTAAGAGATAAAAGACAGCCCAGGGGAGAGCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000213669.2
ENSMUST00000214022.3
ENSMUST00000216592.2
CDS-3UTR GCA 90 bp TCAGCTCTCCCCTGGGCTGTCTTTTATCTCTTACTATTTCCCAGAATCATCTCTATTTGTATGATAGAATaGAAGAAACCTCCTGCCCAA +
Preference number: 4 (lower is better)
Translates to: SALPWAVFYLLLFPRIISICMIE*KKPPAQ
Trigger: TTGGGCAGGAGGTTTCTTGCATTCTATCATACAAAT...AGAGATGATTCTGGGAAATAGTAAGAGATAAAAGACAGCCCAGGGGAGAGCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000213669.2
ENSMUST00000214022.3
ENSMUST00000216592.2
CDS-3UTR CCA 90 bp CAGATATCATATCCACAAGATGTACTTTTAGATATCATACCTCTCCTTGTAGTCCGCCCTTCAGAACTCTaGGCTCTCAGAGAAAACAAG +
Preference number: 4 (lower is better)
Translates to: QISYPQDVLLDIIPLLVVRPSEL*ALRENK
Trigger: CTTGTTTTCTCTGAGAGCCCAGAGTTCTGAAGGGCG...GACTACAAGGAGAGGTATGATATCTAAAAGTACATCTTGTGGATATGATATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000213669.2
ENSMUST00000214022.3
ENSMUST00000216592.2
3UTR CAA 72 bp ATAAAAACTGTAAGTTTTGCTGAACACAATGAGACCTaGACAAGATTCAGATTTGGCTCCATGTCGTTTCTG +
Preference number: 4 (lower is better)
Translates to: IKTVSFAEHNET*TRFRFGSMSFL
Trigger: CAGAAACGACATGGAGCCAAATCTGAATCTTGTCAAGGTCTCATTGTGTTCAGCAAAACTTACAGTTTTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000213669.2
ENSMUST00000214022.3
ENSMUST00000216592.2
CDS-3UTR TCA 90 bp CAGATATCATATCCACAAGATGTACTTTTAGATATCATACCTCTCCTTGTAGTCACATGTAATGATCAATaGCATTGGGTCCACATAAAG +
Preference number: 4 (lower is better)
Translates to: QISYPQDVLLDIIPLLVVTCNDQ*HWVHIK
Trigger: CTTTATGTGGACCCAATGTCATTGATCATTACATGT...GACTACAAGGAGAGGTATGATATCTAAAAGTACATCTTGTGGATATGATATCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000213669.2
ENSMUST00000214022.3
ENSMUST00000216592.2
CDS-3UTR GCA 90 bp CAGATATCATATCCACAAGATGTACTTTTAGATATCATACCTCTCCTTGTAGTCATTTGTATGATAGAATaGAAGAAACCTCCTGCCCAA +
Preference number: 4 (lower is better)
Translates to: QISYPQDVLLDIIPLLVVICMIE*KKPPAQ
Trigger: TTGGGCAGGAGGTTTCTTGCATTCTATCATACAAAT...GACTACAAGGAGAGGTATGATATCTAAAAGTACATCTTGTGGATATGATATCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000213669.2
ENSMUST00000214022.3
ENSMUST00000216592.2
CDS-3UTR CAA 90 bp CCCTCGAGACCCACGAATAACTGGACCTGCTGGACGGGTCACATTCAAATAGTTGTGGACTGTAAACAGTaGTGTCATGCAACATTCAAA +
Preference number: 5 (lower is better)
Translates to: PSRPTNNWTCWTGHIQIVVDCKQ*CHATFK
Trigger: TTTGAATGTTGCATGACACAACTGTTTACAGTCCAC...AACTATTTGAATGTGACCCGTCCAGCAGGTCCAGTTATTCGTGGGTCTCGAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000213669.2
ENSMUST00000214022.3
ENSMUST00000216592.2
CDS-3UTR CAA 90 bp CTTCCTGCCAGTGTCCCAGTTCCTATTTCCTGCCTCAGTTCATTGGCCATATACGTGGACTGTAAACAGTaGTGTCATGCAACATTCAAA +
Preference number: 5 (lower is better)
Translates to: LPASVPVPISCLSSLAIYVDCKQ*CHATFK
Trigger: TTTGAATGTTGCATGACACAACTGTTTACAGTCCAC...GTATATGGCCAATGAACTGAGGCAGGAAATAGGAACTGGGACACTGGCAGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000099799.5
ENSMUST00000213669.2
ENSMUST00000214022.3
ENSMUST00000216592.2
CDS-3UTR CAA 90 bp CTTCCTGCCAGTGTCCCAGTTCCTATTTCCTGCCTCAGTTCATTGGCCATATACCATATAGCACCACTGTaGGCAAATATCAAAAGGACA +
Preference number: 5 (lower is better)
Translates to: LPASVPVPISCLSSLAIYHIAPL*ANIKRT
Trigger: TGTCCTTTTGATATTTGCCAACAGTGGTGCTATATG...GTATATGGCCAATGAACTGAGGCAGGAAATAGGAACTGGGACACTGGCAGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000099799.5
ENSMUST00000213669.2
ENSMUST00000214022.3
ENSMUST00000216592.2
CDS-3UTR CAA 90 bp CTCTCCCCTGGGCTGTCTTTTATCTCTTACTATTTCCCAGAATCATCTCTCTTCGTGGACTGTAAACAGTaGTGTCATGCAACATTCAAA +
Preference number: 5 (lower is better)
Translates to: LSPGLSFISYYFPESSLFVDCKQ*CHATFK
Trigger: TTTGAATGTTGCATGACACAACTGTTTACAGTCCAC...GAAGAGAGATGATTCTGGGAAATAGTAAGAGATAAAAGACAGCCCAGGGGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000213669.2
ENSMUST00000214022.3
ENSMUST00000216592.2
CDS-3UTR CAA 90 bp CAGATATCATATCCACAAGATGTACTTTTAGATATCATACCTCTCCTTGTAGTCCATATAGCACCACTGTaGGCAAATATCAAAAGGACA +
Preference number: 5 (lower is better)
Translates to: QISYPQDVLLDIIPLLVVHIAPL*ANIKRT
Trigger: TGTCCTTTTGATATTTGCCAACAGTGGTGCTATATG...GACTACAAGGAGAGGTATGATATCTAAAAGTACATCTTGTGGATATGATATCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000213669.2
ENSMUST00000214022.3
ENSMUST00000216592.2