Pregenerated sensors for OLFR1211 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075112Ensembl transcript IDs: ENSMUST00000099808.2, ENSMUST00000213412.2, ENSMUST00000215205.2
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CTCAGAGATGACATGAATTGCAATGGGCTAGGCCCTCCCTTGTCAATCTCTAATACCTGTCTTGAATCTTaGCTCTTTTCAGGAGTCAGT | + |
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Preference number: 2 (lower is better) Translates to: LRDDMNCNGLGPPLSISNTCLES*LFSGVS Trigger: ACTGACTCCTGAAAAGAGCCAAGATTCAAGACAGGT...ATTAGAGATTGACAAGGGAGGGCCTAGCCCATTGCAATTCATGTCATCTCTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213412.2 ENSMUST00000215205.2 |
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| 3UTR-3UTR TCA 90 bp | CTCAGAGATGACATGAATTGCAATGGGCTAGGCCCTCCCTTGTCAATCTCTAATTCACTTTCTAATACTTaGTTAAGAAGTACTCACCCC | + |
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Preference number: 2 (lower is better) Translates to: LRDDMNCNGLGPPLSISNSLSNT*LRSTHP Trigger: GGGGTGAGTACTTCTTAATCAAGTATTAGAAAGTGA...ATTAGAGATTGACAAGGGAGGGCCTAGCCCATTGCAATTCATGTCATCTCTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213412.2 ENSMUST00000215205.2 |
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| 3UTR-3UTR CCA 90 bp | CTCAGAGATGACATGAATTGCAATGGGCTAGGCCCTCCCTTGTCAATCTCTAATGCATATTGTGTGGTGTaGAGAGAATATCAAATAACC | + |
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Preference number: 2 (lower is better) Translates to: LRDDMNCNGLGPPLSISNAYCVV*REYQIT Trigger: GGTTATTTGATATTCTCTCCACACCACACAATATGC...ATTAGAGATTGACAAGGGAGGGCCTAGCCCATTGCAATTCATGTCATCTCTGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213412.2 ENSMUST00000215205.2 |
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| 3UTR-3UTR CCA 90 bp | AAAAAGCTGAGGTTCTTGAGTGCTCTGCTGTCCACCTGTCTTGAATCTTGGCTCATCTGTAAAATGTTTTaGCATATTGTGTGGTGTGGA | + |
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Preference number: 2 (lower is better) Translates to: KKLRFLSALLSTCLESWLICKMF*HIVWCG Trigger: TCCACACCACACAATATGCCAAAACATTTTACAGAT...GAGCCAAGATTCAAGACAGGTGGACAGCAGAGCACTCAAGAACCTCAGCTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000213412.2 ENSMUST00000215205.2 |
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| 3UTR-3UTR CCA 90 bp | CTACTCAACACATTCAGATTTGCTCCTTTCCCAACAAACCACTCTATAGTAGACACCTGTCTTGAATCTTaGCTCTTTTCAGGAGTCAGT | + |
|
Preference number: 2 (lower is better) Translates to: LLNTFRFAPFPTNHSIVDTCLES*LFSGVS Trigger: ACTGACTCCTGAAAAGAGCCAAGATTCAAGACAGGT...GTCTACTATAGAGTGGTTTGTTGGGAAAGGAGCAAATCTGAATGTGTTGAGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213412.2 ENSMUST00000215205.2 |
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| 3UTR-3UTR CCA 90 bp | CTACTCAACACATTCAGATTTGCTCCTTTCCCAACAAACCACTCTATAGTAGACGCCCACACTAAATGCTaGCATCATATGGCACAAAAA | + |
|
Preference number: 2 (lower is better) Translates to: LLNTFRFAPFPTNHSIVDAHTKC*HHMAQK Trigger: TTTTTGTGCCATATGATGCCAGCATTTAGTGTGGGC...GTCTACTATAGAGTGGTTTGTTGGGAAAGGAGCAAATCTGAATGTGTTGAGTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213412.2 ENSMUST00000215205.2 |
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| 3UTR-3UTR CCA 90 bp | CTACTCAACACATTCAGATTTGCTCCTTTCCCAACAAACCACTCTATAGTAGACGCATATTGTGTGGTGTaGAGAGAATATCAAATAACC | + |
|
Preference number: 2 (lower is better) Translates to: LLNTFRFAPFPTNHSIVDAYCVV*REYQIT Trigger: GGTTATTTGATATTCTCTCCACACCACACAATATGC...GTCTACTATAGAGTGGTTTGTTGGGAAAGGAGCAAATCTGAATGTGTTGAGTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213412.2 ENSMUST00000215205.2 |
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| 3UTR-3UTR CCA 90 bp | CTACTCAACACATTCAGATTTGCTCCTTTCCCAACAAACCACTCTATAGTAGACTTTTGGCATATTGTGTaGTGTGGAGAGAATATCAAA | + |
|
Preference number: 2 (lower is better) Translates to: LLNTFRFAPFPTNHSIVDFWHIV*CGENIK Trigger: TTTGATATTCTCTCCACACCACACAATATGCCAAAA...GTCTACTATAGAGTGGTTTGTTGGGAAAGGAGCAAATCTGAATGTGTTGAGTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213412.2 ENSMUST00000215205.2 |
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| 3UTR-3UTR TCA 90 bp | AACCATTTACTAAACTGGAAGCAATGGGCAGTATTGAGCAAATTTACCTCAGTATCACTTTCTAATACTTaGTTAAGAAGTACTCACCCC | + |
|
Preference number: 2 (lower is better) Translates to: NHLLNWKQWAVLSKFTSVSLSNT*LRSTHP Trigger: GGGGTGAGTACTTCTTAATCAAGTATTAGAAAGTGA...TACTGAGGTAAATTTGCTCAATACTGCCCATTGCTTCCAGTTTAGTAAATGGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213412.2 ENSMUST00000215205.2 |
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| 3UTR-3UTR CCA 90 bp | AACCATTTACTAAACTGGAAGCAATGGGCAGTATTGAGCAAATTTACCTCAGTATGTTTTGCTTTGAACTaGCATGAAAGGCTGAAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: NHLLNWKQWAVLSKFTSVCFALN*HERLKK Trigger: TTTCTTCAGCCTTTCATGCCAGTTCAAAGCAAAACA...TACTGAGGTAAATTTGCTCAATACTGCCCATTGCTTCCAGTTTAGTAAATGGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213412.2 ENSMUST00000215205.2 |
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| 3UTR-3UTR CCA 90 bp | AACCATTTACTAAACTGGAAGCAATGGGCAGTATTGAGCAAATTTACCTCAGTATTTTGGCATATTGTGTaGTGTGGAGAGAATATCAAA | + |
|
Preference number: 2 (lower is better) Translates to: NHLLNWKQWAVLSKFTSVFWHIV*CGENIK Trigger: TTTGATATTCTCTCCACACCACACAATATGCCAAAA...TACTGAGGTAAATTTGCTCAATACTGCCCATTGCTTCCAGTTTAGTAAATGGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213412.2 ENSMUST00000215205.2 |
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| 3UTR-3UTR CAA 90 bp | CTACTCAACACATTCAGATTTGCTCCTTTCCCAACAAACCACTCTATAGTAGACAAAAAGCTGAGGTTCTaGAGTGCTCTGCTGTCCACC | + |
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Preference number: 3 (lower is better) Translates to: LLNTFRFAPFPTNHSIVDKKLRF*SALLST Trigger: GGTGGACAGCAGAGCACTCAAGAACCTCAGCTTTTT...GTCTACTATAGAGTGGTTTGTTGGGAAAGGAGCAAATCTGAATGTGTTGAGTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213412.2 ENSMUST00000215205.2 |
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| 3UTR-3UTR CAA 90 bp | CTCAGAGATGACATGAATTGCAATGGGCTAGGCCCTCCCTTGTCAATCTCTAATTCAACACATTCAGATTaGCTCCTTTCCCAACAAACC | + |
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Preference number: 3 (lower is better) Translates to: LRDDMNCNGLGPPLSISNSTHSD*LLSQQT Trigger: GGTTTGTTGGGAAAGGAGCAAATCTGAATGTGTTGA...ATTAGAGATTGACAAGGGAGGGCCTAGCCCATTGCAATTCATGTCATCTCTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213412.2 ENSMUST00000215205.2 |
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| 3UTR-3UTR CAA 90 bp | CTACTCAACACATTCAGATTTGCTCCTTTCCCAACAAACCACTCTATAGTAGACTGCTGTCCACCTGTCTaGAATCTTGGCTCTTTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: LLNTFRFAPFPTNHSIVDCCPPV*NLGSFQ Trigger: CTGAAAAGAGCCAAGATTCAAGACAGGTGGACAGCA...GTCTACTATAGAGTGGTTTGTTGGGAAAGGAGCAAATCTGAATGTGTTGAGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213412.2 ENSMUST00000215205.2 |
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| 3UTR CCA 72 bp | TTCTTGAGTGCTCTGCTGTCCACCTGTCTTGAATCTTaGCTCTTTTCAGGAGTCAGTGAAATCTGTAAAATG | + |
|
Preference number: 3 (lower is better) Translates to: FLSALLSTCLES*LFSGVSEICKM Trigger: CATTTTACAGATTTCACTGACTCCTGAAAAGAGCCAAGATTCAAGACAGGTGGACAGCAGAGCACTCAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213412.2 ENSMUST00000215205.2 |
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| 3UTR-3UTR CAA 90 bp | CTCAGAGATGACATGAATTGCAATGGGCTAGGCCCTCCCTTGTCAATCTCTAATTCTTTTAAAGATGGTTaGCTAGTGCCAGACATAATC | + |
|
Preference number: 3 (lower is better) Translates to: LRDDMNCNGLGPPLSISNSFKDG*LVPDII Trigger: GATTATGTCTGGCACTAGCAAACCATCTTTAAAAGA...ATTAGAGATTGACAAGGGAGGGCCTAGCCCATTGCAATTCATGTCATCTCTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213412.2 ENSMUST00000215205.2 |
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| 3UTR-3UTR CAA 90 bp | CTCAGAGATGACATGAATTGCAATGGGCTAGGCCCTCCCTTGTCAATCTCTAATTTCCATATAAATCTGTaGACTCATGTGTCACCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: LRDDMNCNGLGPPLSISNFHINL*THVSPK Trigger: CTTTGGTGACACATGAGTCAACAGATTTATATGGAA...ATTAGAGATTGACAAGGGAGGGCCTAGCCCATTGCAATTCATGTCATCTCTGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213412.2 ENSMUST00000215205.2 |
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| 3UTR-3UTR CAA 90 bp | CTCAGAGATGACATGAATTGCAATGGGCTAGGCCCTCCCTTGTCAATCTCTAATGACACATGTGTTACATaGTTACACATCTGTTCATTC | + |
|
Preference number: 3 (lower is better) Translates to: LRDDMNCNGLGPPLSISNDTCVT*LHICSF Trigger: GAATGAACAGATGTGTAACAATGTAACACATGTGTC...ATTAGAGATTGACAAGGGAGGGCCTAGCCCATTGCAATTCATGTCATCTCTGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213412.2 ENSMUST00000215205.2 |
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| 3UTR-3UTR CAA 90 bp | AACCATTTACTAAACTGGAAGCAATGGGCAGTATTGAGCAAATTTACCTCAGTATGCTGTCCACCTGTCTaGAATCTTGGCTCTTTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: NHLLNWKQWAVLSKFTSVCCPPV*NLGSFQ Trigger: CTGAAAAGAGCCAAGATTCAAGACAGGTGGACAGCA...TACTGAGGTAAATTTGCTCAATACTGCCCATTGCTTCCAGTTTAGTAAATGGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213412.2 ENSMUST00000215205.2 |
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| 3UTR-3UTR CAA 90 bp | CTACTCAACACATTCAGATTTGCTCCTTTCCCAACAAACCACTCTATAGTAGACTACATAATCTCTCTCTaGTTCTTCCTTGTGAGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: LLNTFRFAPFPTNHSIVDYIISL*FFLVSV Trigger: CACACTCACAAGGAAGAACAAGAGAGAGATTATGTA...GTCTACTATAGAGTGGTTTGTTGGGAAAGGAGCAAATCTGAATGTGTTGAGTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213412.2 ENSMUST00000215205.2 |
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| 3UTR-3UTR CAA 90 bp | CTACTCAACACATTCAGATTTGCTCCTTTCCCAACAAACCACTCTATAGTAGACTCTTTTAAAGATGGTTaGCTAGTGCCAGACATAATC | + |
|
Preference number: 3 (lower is better) Translates to: LLNTFRFAPFPTNHSIVDSFKDG*LVPDII Trigger: GATTATGTCTGGCACTAGCAAACCATCTTTAAAAGA...GTCTACTATAGAGTGGTTTGTTGGGAAAGGAGCAAATCTGAATGTGTTGAGTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213412.2 ENSMUST00000215205.2 |
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| 3UTR-3UTR CAA 90 bp | CTACTCAACACATTCAGATTTGCTCCTTTCCCAACAAACCACTCTATAGTAGACTTCCATATAAATCTGTaGACTCATGTGTCACCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: LLNTFRFAPFPTNHSIVDFHINL*THVSPK Trigger: CTTTGGTGACACATGAGTCAACAGATTTATATGGAA...GTCTACTATAGAGTGGTTTGTTGGGAAAGGAGCAAATCTGAATGTGTTGAGTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213412.2 ENSMUST00000215205.2 |
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| 3UTR-3UTR CAA 90 bp | CTACTCAACACATTCAGATTTGCTCCTTTCCCAACAAACCACTCTATAGTAGACGACACATGTGTTACATaGTTACACATCTGTTCATTC | + |
|
Preference number: 3 (lower is better) Translates to: LLNTFRFAPFPTNHSIVDDTCVT*LHICSF Trigger: GAATGAACAGATGTGTAACAATGTAACACATGTGTC...GTCTACTATAGAGTGGTTTGTTGGGAAAGGAGCAAATCTGAATGTGTTGAGTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213412.2 ENSMUST00000215205.2 |
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| 3UTR TCA 72 bp | TTCTTGTATATCATCAACAGAGTTTACACAGAGGGGTaGGAGGATACATTTATAAGTCAGTGCTTGATTTTA | + |
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Preference number: 3 (lower is better) Translates to: FLYIINRVYTEG*EDTFISQCLIL Trigger: TAAAATCAAGCACTGACTTATAAATGTATCCTCTCACCCCTCTGTGTAAACTCTGTTGATGATATACAAGAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213412.2 ENSMUST00000215205.2 |
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| CDS-3UTR TCA 90 bp | AAAAAGCTGAGGTTCTTGAGTGCTCTGCTGTCCACCTGTCTTGAATCTTGGCTCAGAGCCTCCAGTTCATaGTGGAAGAGTAGTGCAAGG | + |
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Preference number: 4 (lower is better) Translates to: KKLRFLSALLSTCLESWLRASSS*WKSSAR Trigger: CCTTGCACTACTCTTCCATCATGAACTGGAGGCTCT...GAGCCAAGATTCAAGACAGGTGGACAGCAGAGCACTCAAGAACCTCAGCTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213412.2 ENSMUST00000215205.2 |
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| CDS-3UTR TCA 90 bp | CTCAGAGATGACATGAATTGCAATGGGCTAGGCCCTCCCTTGTCAATCTCTAATAGAGCCTCCAGTTCATaGTGGAAGAGTAGTGCAAGG | + |
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Preference number: 4 (lower is better) Translates to: LRDDMNCNGLGPPLSISNRASSS*WKSSAR Trigger: CCTTGCACTACTCTTCCATCATGAACTGGAGGCTCT...ATTAGAGATTGACAAGGGAGGGCCTAGCCCATTGCAATTCATGTCATCTCTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213412.2 ENSMUST00000215205.2 |
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| CDS-3UTR TCA 90 bp | CTCAGAGATGACATGAATTGCAATGGGCTAGGCCCTCCCTTGTCAATCTCTAATTCAGAGAGAACAGGATaGCACCATAGGAGACCAGCA | + |
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Preference number: 4 (lower is better) Translates to: LRDDMNCNGLGPPLSISNSERTG*HHRRPA Trigger: TGCTGGTCTCCTATGGTGTCATCCTGTTCTCTCTGA...ATTAGAGATTGACAAGGGAGGGCCTAGCCCATTGCAATTCATGTCATCTCTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213412.2 ENSMUST00000215205.2 |
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| CDS-3UTR TCA 90 bp | CTACTCAACACATTCAGATTTGCTCCTTTCCCAACAAACCACTCTATAGTAGACCGCCCTTCAGAACTGTaGGCTTTCAGAGAGAACAGG | + |
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Preference number: 4 (lower is better) Translates to: LLNTFRFAPFPTNHSIVDRPSEL*AFRENR Trigger: CCTGTTCTCTCTGAAAGCTCACAGTTCTGAAGGGCG...GTCTACTATAGAGTGGTTTGTTGGGAAAGGAGCAAATCTGAATGTGTTGAGTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213412.2 ENSMUST00000215205.2 |
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| CDS-3UTR GCA 90 bp | CTCAGAGATGACATGAATTGCAATGGGCTAGGCCCTCCCTTGTCAATCTCTAATACTGCTGCAAGGAAGTaGTCAGCAAATAACTGCATC | + |
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Preference number: 4 (lower is better) Translates to: LRDDMNCNGLGPPLSISNTAARK*SANNCI Trigger: GATGCAGTTATTTGCTGAGCACTTCCTTGCAGCAGT...ATTAGAGATTGACAAGGGAGGGCCTAGCCCATTGCAATTCATGTCATCTCTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213412.2 ENSMUST00000215205.2 |
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| CDS-3UTR TCA 90 bp | AACCATTTACTAAACTGGAAGCAATGGGCAGTATTGAGCAAATTTACCTCAGTACGCCCTTCAGAACTGTaGGCTTTCAGAGAGAACAGG | + |
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Preference number: 4 (lower is better) Translates to: NHLLNWKQWAVLSKFTSVRPSEL*AFRENR Trigger: CCTGTTCTCTCTGAAAGCTCACAGTTCTGAAGGGCG...TACTGAGGTAAATTTGCTCAATACTGCCCATTGCTTCCAGTTTAGTAAATGGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213412.2 ENSMUST00000215205.2 |
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| CDS-3UTR GCA 90 bp | CTCAGAGATGACATGAATTGCAATGGGCTAGGCCCTCCCTTGTCAATCTCTAATCCACAGAAGGGCAATTaGAACGTGAAGATAATTTGT | + |
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Preference number: 4 (lower is better) Translates to: LRDDMNCNGLGPPLSISNPQKGN*NVKIIC Trigger: ACAAATTATCTTCACGTTGCAATTGCCCTTCTGTGG...ATTAGAGATTGACAAGGGAGGGCCTAGCCCATTGCAATTCATGTCATCTCTGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213412.2 ENSMUST00000215205.2 |
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| CDS-3UTR TCA 90 bp | AACCATTTACTAAACTGGAAGCAATGGGCAGTATTGAGCAAATTTACCTCAGTATCAGAGAGAACAGGATaGCACCATAGGAGACCAGCA | + |
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Preference number: 4 (lower is better) Translates to: NHLLNWKQWAVLSKFTSVSERTG*HHRRPA Trigger: TGCTGGTCTCCTATGGTGTCATCCTGTTCTCTCTGA...TACTGAGGTAAATTTGCTCAATACTGCCCATTGCTTCCAGTTTAGTAAATGGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213412.2 ENSMUST00000215205.2 |
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| CDS-3UTR GCA 90 bp | CTACTCAACACATTCAGATTTGCTCCTTTCCCAACAAACCACTCTATAGTAGACTCCATCAGAAACCACTaGCAACCTCTTCCACACTTT | + |
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Preference number: 4 (lower is better) Translates to: LLNTFRFAPFPTNHSIVDSIRNH*QPLPHF Trigger: AAAGTGTGGAAGAGGTTGGCAGTGGTTTCTGATGGA...GTCTACTATAGAGTGGTTTGTTGGGAAAGGAGCAAATCTGAATGTGTTGAGTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213412.2 ENSMUST00000215205.2 |
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| CDS-3UTR GCA 90 bp | CTACTCAACACATTCAGATTTGCTCCTTTCCCAACAAACCACTCTATAGTAGACCCACAATTATCATGTTaGCCCCAACAGTTGCAATGT | + |
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Preference number: 4 (lower is better) Translates to: LLNTFRFAPFPTNHSIVDPQLSC*PQQLQC Trigger: ACATTGCAACTGTTGGGGGCAACATGATAATTGTGG...GTCTACTATAGAGTGGTTTGTTGGGAAAGGAGCAAATCTGAATGTGTTGAGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213412.2 ENSMUST00000215205.2 |
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| CDS-3UTR GCA 90 bp | AACCATTTACTAAACTGGAAGCAATGGGCAGTATTGAGCAAATTTACCTCAGTAGACAATCACTTCTACTaGTGCAAGGAAGTGCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: NHLLNWKQWAVLSKFTSVDNHFY*CKEVLS Trigger: GCTGAGCACTTCCTTGCAGCAGTAGAAGTGATTGTC...TACTGAGGTAAATTTGCTCAATACTGCCCATTGCTTCCAGTTTAGTAAATGGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213412.2 ENSMUST00000215205.2 |
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| CDS-3UTR TCA 90 bp | CTACTCAACACATTCAGATTTGCTCCTTTCCCAACAAACCACTCTATAGTAGACGACTTTAGGGTTCTGTaGAAGTCCAAGGAATATGAA | + |
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Preference number: 4 (lower is better) Translates to: LLNTFRFAPFPTNHSIVDDFRVL*KSKEYE Trigger: TTCATATTCCTTGGACTTTCACAGAACCCTAAAGTC...GTCTACTATAGAGTGGTTTGTTGGGAAAGGAGCAAATCTGAATGTGTTGAGTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213412.2 ENSMUST00000215205.2 |
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| CDS-3UTR GCA 90 bp | AACCATTTACTAAACTGGAAGCAATGGGCAGTATTGAGCAAATTTACCTCAGTAACTGCTGCAAGGAAGTaGTCAGCAAATAACTGCATC | + |
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Preference number: 4 (lower is better) Translates to: NHLLNWKQWAVLSKFTSVTAARK*SANNCI Trigger: GATGCAGTTATTTGCTGAGCACTTCCTTGCAGCAGT...TACTGAGGTAAATTTGCTCAATACTGCCCATTGCTTCCAGTTTAGTAAATGGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213412.2 ENSMUST00000215205.2 |
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| CDS-3UTR GCA 90 bp | CTACTCAACACATTCAGATTTGCTCCTTTCCCAACAAACCACTCTATAGTAGACAGATATGAGTATCAGTaGAGGCAAGTTCCAGTAATG | + |
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Preference number: 4 (lower is better) Translates to: LLNTFRFAPFPTNHSIVDRYEYQ*RQVPVM Trigger: CATTACTGGAACTTGCCTGCACTGATACTCATATCT...GTCTACTATAGAGTGGTTTGTTGGGAAAGGAGCAAATCTGAATGTGTTGAGTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213412.2 ENSMUST00000215205.2 |
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| CDS-3UTR GCA 90 bp | CTACTCAACACATTCAGATTTGCTCCTTTCCCAACAAACCACTCTATAGTAGACAGCAGATGGAGGACGTaGATAAATAAATATACACGG | + |
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Preference number: 4 (lower is better) Translates to: LLNTFRFAPFPTNHSIVDSRWRT*INKYTR Trigger: CCGTGTATATTTATTTATGCACGTCCTCCATCTGCT...GTCTACTATAGAGTGGTTTGTTGGGAAAGGAGCAAATCTGAATGTGTTGAGTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213412.2 ENSMUST00000215205.2 |
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| CDS-3UTR GCA 90 bp | AACCATTTACTAAACTGGAAGCAATGGGCAGTATTGAGCAAATTTACCTCAGTATCCATCAGAAACCACTaGCAACCTCTTCCACACTTT | + |
|
Preference number: 4 (lower is better) Translates to: NHLLNWKQWAVLSKFTSVSIRNH*QPLPHF Trigger: AAAGTGTGGAAGAGGTTGGCAGTGGTTTCTGATGGA...TACTGAGGTAAATTTGCTCAATACTGCCCATTGCTTCCAGTTTAGTAAATGGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213412.2 ENSMUST00000215205.2 |
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| CDS-3UTR GCA 90 bp | AACCATTTACTAAACTGGAAGCAATGGGCAGTATTGAGCAAATTTACCTCAGTAAGATATGAGTATCAGTaGAGGCAAGTTCCAGTAATG | + |
|
Preference number: 4 (lower is better) Translates to: NHLLNWKQWAVLSKFTSVRYEYQ*RQVPVM Trigger: CATTACTGGAACTTGCCTGCACTGATACTCATATCT...TACTGAGGTAAATTTGCTCAATACTGCCCATTGCTTCCAGTTTAGTAAATGGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213412.2 ENSMUST00000215205.2 |
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| CDS-3UTR GCA 90 bp | AACCATTTACTAAACTGGAAGCAATGGGCAGTATTGAGCAAATTTACCTCAGTAAGCAGATGGAGGACGTaGATAAATAAATATACACGG | + |
|
Preference number: 4 (lower is better) Translates to: NHLLNWKQWAVLSKFTSVSRWRT*INKYTR Trigger: CCGTGTATATTTATTTATGCACGTCCTCCATCTGCT...TACTGAGGTAAATTTGCTCAATACTGCCCATTGCTTCCAGTTTAGTAAATGGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213412.2 ENSMUST00000215205.2 |
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| 3UTR CAA 72 bp | TATAAATCTACCTTAATCCATTTCCATATAAATCTGTaGACTCATGTGTCACCAAAGGAATACGCCCAACTT | + |
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Preference number: 4 (lower is better) Translates to: YKSTLIHFHINL*THVSPKEYAQL Trigger: AAGTTGGGCGTATTCCTTTGGTGACACATGAGTCAACAGATTTATATGGAAATGGATTAAGGTAGATTTATA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213412.2 ENSMUST00000215205.2 |
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| CDS-3UTR CAA 90 bp | CTACTCAACACATTCAGATTTGCTCCTTTCCCAACAAACCACTCTATAGTAGACCAGATAGACCCACTGTaGGCAACCACTAAAAGGCCA | + |
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Preference number: 5 (lower is better) Translates to: LLNTFRFAPFPTNHSIVDQIDPL*ATTKRP Trigger: TGGCCTTTTAGTGGTTGCCAACAGTGGGTCTATCTG...GTCTACTATAGAGTGGTTTGTTGGGAAAGGAGCAAATCTGAATGTGTTGAGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213412.2 ENSMUST00000215205.2 |
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| CDS-3UTR CAA 90 bp | CTCAGAGATGACATGAATTGCAATGGGCTAGGCCCTCCCTTGTCAATCTCTAATTGTTGCCCCCAACAGTaGCAATGTAGACAAATAAAA | + |
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Preference number: 5 (lower is better) Translates to: LRDDMNCNGLGPPLSISNCCPQQ*QCRQIK Trigger: TTTTATTTGTCTACATTGCAACTGTTGGGGGCAACA...ATTAGAGATTGACAAGGGAGGGCCTAGCCCATTGCAATTCATGTCATCTCTGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213412.2 ENSMUST00000215205.2 |
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| CDS-3UTR CAA 90 bp | CTACTCAACACATTCAGATTTGCTCCTTTCCCAACAAACCACTCTATAGTAGACACCACAATTATCATGTaGCCCCCAACAGTTGCAATG | + |
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Preference number: 5 (lower is better) Translates to: LLNTFRFAPFPTNHSIVDTTIIM*PPTVAM Trigger: CATTGCAACTGTTGGGGGCAACATGATAATTGTGGT...GTCTACTATAGAGTGGTTTGTTGGGAAAGGAGCAAATCTGAATGTGTTGAGTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213412.2 ENSMUST00000215205.2 |
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| CDS-3UTR CAA 90 bp | AACCATTTACTAAACTGGAAGCAATGGGCAGTATTGAGCAAATTTACCTCAGTATGTTGCCCCCAACAGTaGCAATGTAGACAAATAAAA | + |
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Preference number: 5 (lower is better) Translates to: NHLLNWKQWAVLSKFTSVCCPQQ*QCRQIK Trigger: TTTTATTTGTCTACATTGCAACTGTTGGGGGCAACA...TACTGAGGTAAATTTGCTCAATACTGCCCATTGCTTCCAGTTTAGTAAATGGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213412.2 ENSMUST00000215205.2 |
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| CDS CCA 72 bp | ACATGGGGCAGTCTATCAATGCTGGGCTACAGACAATaGTCACCACAATTATCATGTTGCCCCCAACAGTTG | + |
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Preference number: 6 (lower is better) Translates to: TWGSLSMLGYRQ*SPQLSCCPQQL Trigger: CAACTGTTGGGGGCAACATGATAATTGTGGTGACCATTGTCTGTAGCCCAGCATTGATAGACTGCCCCATGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000099808.2 ENSMUST00000213412.2 ENSMUST00000215205.2 |
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| CDS GCA 72 bp | GAATGCCAAAAAGAAGTACATGGGGCAGTCTATCAATaGTGGGCTACAGACAATGGTCACCACAATTATCAT | + |
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Preference number: 6 (lower is better) Translates to: ECQKEVHGAVYQ*WATDNGHHNYH Trigger: ATGATAATTGTGGTGACCATTGTCTGTAGCCCAGCATTGATAGACTGCCCCATGTACTTCTTTTTGGCATTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000099808.2 ENSMUST00000213412.2 ENSMUST00000215205.2 |
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| CDS GCA 72 bp | GCTGTCAAGACAATCACTTCTACTGCTGCAAGGAAGTaGTCAGCAAATAACTGCATCATACATCCTTCAAAG | + |
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Preference number: 6 (lower is better) Translates to: AVKTITSTAARK*SANNCIIHPSK Trigger: CTTTGAAGGATGTATGATGCAGTTATTTGCTGAGCACTTCCTTGCAGCAGTAGAAGTGATTGTCTTGACAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099808.2 ENSMUST00000213412.2 ENSMUST00000215205.2 |
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| CDS CCA 72 bp | TGCCAAAAAGAAGTACATGGGGCAGTCTATCAATGCTaGGCTACAGACAATGGTCACCACAATTATCATGTT | + |
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Preference number: 6 (lower is better) Translates to: CQKEVHGAVYQC*ATDNGHHNYHV Trigger: AACATGATAATTGTGGTGACCATTGTCTGTAGCCCAGCATTGATAGACTGCCCCATGTACTTCTTTTTGGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000099808.2 ENSMUST00000213412.2 ENSMUST00000215205.2 |
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| CDS GCA 72 bp | CTGGGCTACAGACAATGGTCACCACAATTATCATGTTaGCCCCAACAGTTGCAATGTAGACAAATAAAAATA | + |
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Preference number: 6 (lower is better) Translates to: LGYRQWSPQLSC*PQQLQCRQIKI Trigger: TATTTTTATTTGTCTACATTGCAACTGTTGGGGGCAACATGATAATTGTGGTGACCATTGTCTGTAGCCCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000099808.2 ENSMUST00000213412.2 ENSMUST00000215205.2 |
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