RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OLFR1209 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000075113

Ensembl transcript IDs: ENSMUST00000099809.2, ENSMUST00000213136.2

Found 71 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGGCACATTCTAGGAGGACACCCCCAACCTCTCACTGTCCAAGGGTaGTTATTTCCATTCATTCTCTTGTCCCTCAGGGCTTCTCTCCTG +
Preference number: 1 (lower is better)
Translates to: WHILGGHPQPLTVQG*LFPFILLSLRASLL
Trigger: CAGGAGAGAAGCCCTGAGGGACAAGAGAATGAATGGAAATAAGCACCCTTGGACAGTGAGAGGTTGGGGGTGTCCTCCTAGAATGTGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
3UTR GCA 90 bp GTCTCTTCTGAGACTATGATGGGGCCTAGCAAACACAGAAGTGGATaGTCACAGTCAGCTATTGGATGGATCACAGGACCCCCAATGGTG +
Preference number: 1 (lower is better)
Translates to: VSSETMMGPSKHRSG*SQSAIGWITGPPMV
Trigger: CACCATTGGGGGTCCTGTGATCCATCCAATAGCTGACTGTGAGCATCCACTTCTGTGTTTGCTAGGCCCCATCATAGTCTCAGAAGAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
3UTR CCA 90 bp ATCCTGTCTGTCCCTCCAGTTGAGGCCATGCCTATCTACTGGAGGTaGACTCTTCATGTTCCCTTTCCCCAGTGGTGGGCATTTTTACTT +
Preference number: 1 (lower is better)
Translates to: ILSVPPVEAMPIYWR*TLHVPFPQWWAFLL
Trigger: AAGTAAAAATGCCCACCACTGGGGAAAGGGAACATGAAGAGTCCACCTCCAGTAGATAGGCATGGCCTCAACTGGAGGGACAGACAGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
3UTR GCA 90 bp AGACACTGTTTGGAGCTGAGACAAAAGGATGGACCATCTAGAGACTaGCATATCCGGGGATCCATAATCAACTTCCAAACGCTGACATCA +
Preference number: 1 (lower is better)
Translates to: RHCLELRQKDGPSRD*HIRGSIINFQTLTS
Trigger: TGATGTCAGCGTTTGGAAGTTGATTATGGATCCCCGGATATGGCAGTCTCTAGATGGTCCATCCTTTTGTCTCAGCTCCAAACAGTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
3UTR TCA 90 bp CAAGGAGCTAAAGGGATCTGCAATCCTATAGGTGGAACAACAATATaGACTACCCAGTACCCCCATGAGCTTGTGTTTCTAGCTGCATAT +
Preference number: 1 (lower is better)
Translates to: QGAKGICNPIGGTTI*TTQYPHELVFLAAY
Trigger: ATATGCAGCTAGAAACACAAGCTCATGGGGGTACTGGGTAGTTCATATTGTTGTTCCACCTATAGGATTGCAGATCCCTTTAGCTCCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
3UTR TCA 90 bp TCTCCTGCCCTCCATAATTATTTCCTTTACCCTTCTAGCTGGGAGTaGAGCTTCTTTACTTGGGCATTTTTGCTTCTTACACCTCCTCTG +
Preference number: 1 (lower is better)
Translates to: SPALHNYFLYPSSWE*SFFTWAFLLLTPPL
Trigger: CAGAGGAGGTGTAAGAAGCAAAAATGCCCAAGTAAAGAAGCTTCACTCCCAGCTAGAAGGGTAAAGGAAATAATTATGGAGGGCAGGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
3UTR TCA 90 bp CAATCCTATAGGTGGAACAACAATATGAACTACCCAGTACCCCCATaGGCTTGTGTTTCTAGCTGCATATGTATAAGAAGATGGCCTAGT +
Preference number: 1 (lower is better)
Translates to: QSYRWNNNMNYPVPP*ACVSSCICIRRWPS
Trigger: ACTAGGCCATCTTCTTATACATATGCAGCTAGAAACACAAGCTCATGGGGGTACTGGGTAGTTCATATTGTTGTTCCACCTATAGGATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
3UTR GCA 90 bp TTCCCATCATCTACACTGAGTTTCGATACCATCCATAACACCAATTaGAGAGATCCAGTTTTCTCATCTGATATCTGTGTGTTACCAGGC +
Preference number: 1 (lower is better)
Translates to: FPSSTLSFDTIHNTN*RDPVFSSDICVLPG
Trigger: GCCTGGTAACACACAGATATCAGATGAGAAAACTGGATCTCTGCAATTGGTGTTATGGATGGTATCGAAACTCAGTGTAGATGATGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
3UTR GCA 90 bp TTTACCCTTCTAGCTGGGAGTGAAGCTTCTTTACTTGGGCATTTTTaGTTCTTACACCTCCTCTGGTCTGTAGGATATATCCTAGGTATT +
Preference number: 1 (lower is better)
Translates to: FTLLAGSEASLLGHF*FLHLLWSVGYILGI
Trigger: AATACCTAGGATATATCCTACAGACCAGAGGAGGTGTAAGAAGCAAAAATGCCCAAGTAAAGAAGCTTCACTCCCAGCTAGAAGGGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
3UTR CCA 90 bp AGTGAAGCTTCTTTACTTGGGCATTTTTGCTTCTTACACCTCCTCTaGTCTGTAGGATATATCCTAGGTATTCGGTACTTTTGGGCTAAT +
Preference number: 1 (lower is better)
Translates to: SEASLLGHFCFLHLL*SVGYILGIRYFWAN
Trigger: ATTAGCCCAAAAGTACCGAATACCTAGGATATATCCTACAGACCAGAGGAGGTGTAAGAAGCAAAAATGCCCAAGTAAAGAAGCTTCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
3UTR TCA 90 bp GCTCAGGACACTGAAGAGAATTTGTTCCATGCACCACTTAGATCCTaGGTATTTATTGACCTATGTGGAAGTTCTTTGGTTTGTAAAAGC +
Preference number: 1 (lower is better)
Translates to: AQDTEENLFHAPLRS*VFIDLCGSSLVCKS
Trigger: GCTTTTACAAACCAAAGAACTTCCACATAGGTCAATAAATACTCAGGATCTAAGTGGTGCATGGAACAAATTCTCTTCAGTGTCCTGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
3UTR CCA 90 bp AATTGTTTCCAAATTTCTGAGGAACCACCAGATTCATTTCCAGAATaGTTGTACCATTTTGCAATCCCACCAGCAATGGAAGTGTGTTTC +
Preference number: 1 (lower is better)
Translates to: NCFQISEEPPDSFPE*LYHFAIPPAMEVCF
Trigger: GAAACACACTTCCATTGCTGGTGGGATTGCAAAATGGTACAACCATTCTGGAAATGAATCTGGTGGTTCCTCAGAAATTTGGAAACAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
3UTR TCA 90 bp GGAAGTGTGTTTCTTTTTCTCAACATGCTAGCATATACTGTCACTTaGGGTTTTGATCTTAGCCATCCAGATTGGAGTGAGTTTGAATCT +
Preference number: 1 (lower is better)
Translates to: GSVFLFLNMLAYTVT*GFDLSHPDWSEFES
Trigger: AGATTCAAACTCACTCCAATCTGGATGGCTAAGATCAAAACCTCAAGTGACAGTATATGCTAGCATGTTGAGAAAAAGAAACACACTTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
3UTR TCA 90 bp GTGAGGTCTCTACTTTCCTACACAGGCTTCCCTGAGATGTTTTACTaGGTTGTTATTAGAAGTAATAAGGAATATGCTCATTTAGAAAGG +
Preference number: 1 (lower is better)
Translates to: VRSLLSYTGFPEMFY*VVIRSNKEYAHLER
Trigger: CCTTTCTAAATGAGCATATTCCTTATTACTTCTAATAACAACTCAGTAAAACATCTCAGGGAAGCCTGTGTAGGAAAGTAGAGACCTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
3UTR-3UTR TCA 90 bp CTCCAATGTCTCTGGCACATTCTAGGAGGACACCCCCAACCTCTCACTGTCCAATACCCAGTACCCCCATaGGCTTGTGTTTCTAGCTGC +
Preference number: 2 (lower is better)
Translates to: LQCLWHILGGHPQPLTVQYPVPP*ACVSSC
Trigger: GCAGCTAGAAACACAAGCTCATGGGGGTACTGGGTA...TTGGACAGTGAGAGGTTGGGGGTGTCCTCCTAGAATGTGCCAGAGACATTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
3UTR-3UTR TCA 90 bp CTCCAATGTCTCTGGCACATTCTAGGAGGACACCCCCAACCTCTCACTGTCCAACCTTCTAGCTGGGAGTaGAGCTTCTTTACTTGGGCA +
Preference number: 2 (lower is better)
Translates to: LQCLWHILGGHPQPLTVQPSSWE*SFFTWA
Trigger: TGCCCAAGTAAAGAAGCTTCACTCCCAGCTAGAAGG...TTGGACAGTGAGAGGTTGGGGGTGTCCTCCTAGAATGTGCCAGAGACATTGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
3UTR-3UTR CCA 90 bp CTCCAATGTCTCTGGCACATTCTAGGAGGACACCCCCAACCTCTCACTGTCCAACTAGTAGGCCATCAGTaGAAAGAGAGGCCCATTGGT +
Preference number: 2 (lower is better)
Translates to: LQCLWHILGGHPQPLTVQLVGHQ*KERPIG
Trigger: ACCAATGGGCCTCTCTTTCCACTGATGGCCTACTAG...TTGGACAGTGAGAGGTTGGGGGTGTCCTCCTAGAATGTGCCAGAGACATTGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
3UTR-3UTR CCA 90 bp CTCCAATGTCTCTGGCACATTCTAGGAGGACACCCCCAACCTCTCACTGTCCAACTCCCTGTCACATGGTaGGGCATCTTTTGGGTATAT +
Preference number: 2 (lower is better)
Translates to: LQCLWHILGGHPQPLTVQLPVTW*GIFWVY
Trigger: ATATACCCAAAAGATGCCCCACCATGTGACAGGGAG...TTGGACAGTGAGAGGTTGGGGGTGTCCTCCTAGAATGTGCCAGAGACATTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
3UTR-3UTR GCA 90 bp CTCCAATGTCTCTGGCACATTCTAGGAGGACACCCCCAACCTCTCACTGTCCAAGCTTGTGTTTCTAGCTaGATATGTATAAGAAGATGG +
Preference number: 2 (lower is better)
Translates to: LQCLWHILGGHPQPLTVQACVSS*ICIRRW
Trigger: CCATCTTCTTATACATATGCAGCTAGAAACACAAGC...TTGGACAGTGAGAGGTTGGGGGTGTCCTCCTAGAATGTGCCAGAGACATTGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
3UTR-3UTR CCA 90 bp CTCCAATGTCTCTGGCACATTCTAGGAGGACACCCCCAACCTCTCACTGTCCAAATTGGTGGACAGAAATaGTGGAGAGTGAGAAATATA +
Preference number: 2 (lower is better)
Translates to: LQCLWHILGGHPQPLTVQIGGQK*WRVRNI
Trigger: TATATTTCTCACTCTCCACCATTTCTGTCCACCAAT...TTGGACAGTGAGAGGTTGGGGGTGTCCTCCTAGAATGTGCCAGAGACATTGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
3UTR-3UTR TCA 90 bp GAGTTAAAGAGACACTGTTTGGAGCTGAGACAAAAGGATGGACCATCTAGAGACAGCAACTGTGATGTGTaGACCTTACCAGACTTTGAA +
Preference number: 2 (lower is better)
Translates to: ELKRHCLELRQKDGPSRDSNCDV*TLPDFE
Trigger: TTCAAAGTCTGGTAAGGTTCACACATCACAGTTGCT...GTCTCTAGATGGTCCATCCTTTTGTCTCAGCTCCAAACAGTGTCTCTTTAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
3UTR-3UTR GCA 90 bp GAGTTAAAGAGACACTGTTTGGAGCTGAGACAAAAGGATGGACCATCTAGAGACTCCTATACTAGCCCTTaGTACAGTTATTTGTATCAG +
Preference number: 2 (lower is better)
Translates to: ELKRHCLELRQKDGPSRDSYTSP*YSYLYQ
Trigger: CTGATACAAATAACTGTAGCAAGGGCTAGTATAGGA...GTCTCTAGATGGTCCATCCTTTTGTCTCAGCTCCAAACAGTGTCTCTTTAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
3UTR-3UTR CCA 90 bp GAAAGGAACTATGACTTAATGATGTGTTCTTTTCAGAGACAGACACATTGTCTAGACAGCCACAATTGGTaGACAGAAATGGTGGAGAGT +
Preference number: 2 (lower is better)
Translates to: ERNYDLMMCSFQRQTHCLDSHNW*TEMVES
Trigger: ACTCTCCACCATTTCTGTCCACCAATTGTGGCTGTC...TAGACAATGTGTCTGTCTCTGAAAAGAACACATCATTAAGTCATAGTTCCTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
3UTR-3UTR TCA 90 bp GAAAGGAACTATGACTTAATGATGTGTTCTTTTCAGAGACAGACACATTGTCTACTAGCAAGATTTTGCTaGAAGGACACAGCTATAGCT +
Preference number: 2 (lower is better)
Translates to: ERNYDLMMCSFQRQTHCLLARFC*KDTAIA
Trigger: AGCTATAGCTGTGTCCTTTCAGCAAAATCTTGCTAG...TAGACAATGTGTCTGTCTCTGAAAAGAACACATCATTAAGTCATAGTTCCTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
3UTR-3UTR TCA 90 bp TGTGTCAACTTCCAATACATGGAATTGTATTCTGACAACCTCTGTGAAAATCTTTCCCATCATCTACACTaGGTTTCGATACCATCCATA +
Preference number: 2 (lower is better)
Translates to: CVNFQYMELYSDNLCENLSHHLH*VSIPSI
Trigger: TATGGATGGTATCGAAACTCAGTGTAGATGATGGGA...AAGATTTTCACAGAGGTTGTCAGAATACAATTCCATGTATTGGAAGTTGACACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
3UTR-3UTR CCA 90 bp TGTGTCAACTTCCAATACATGGAATTGTATTCTGACAACCTCTGTGAAAATCTTGGTGGACAGAAATGGTaGAGAGTGAGAAATATAGCA +
Preference number: 2 (lower is better)
Translates to: CVNFQYMELYSDNLCENLGGQKW*RVRNIA
Trigger: TGCTATATTTCTCACTCTCCACCATTTCTGTCCACC...AAGATTTTCACAGAGGTTGTCAGAATACAATTCCATGTATTGGAAGTTGACACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
3UTR-3UTR GCA 90 bp GAAAGGAACTATGACTTAATGATGTGTTCTTTTCAGAGACAGACACATTGTCTATTTCAAACTGTGAAATaGTCCTTTGAGTCATCCTGC +
Preference number: 2 (lower is better)
Translates to: ERNYDLMMCSFQRQTHCLFQTVK*SFESSC
Trigger: GCAGGATGACTCAAAGGAGCATTTCACAGTTTGAAA...TAGACAATGTGTCTGTCTCTGAAAAGAACACATCATTAAGTCATAGTTCCTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
3UTR-3UTR TCA 90 bp GAAAGGAACTATGACTTAATGATGTGTTCTTTTCAGAGACAGACACATTGTCTAAAAAATAAGCAACTGTaGTGTGTGAACCTTACCAGA +
Preference number: 2 (lower is better)
Translates to: ERNYDLMMCSFQRQTHCLKNKQL*CVNLTR
Trigger: TCTGGTAAGGTTCACACATCACAGTTGCTTATTTTT...TAGACAATGTGTCTGTCTCTGAAAAGAACACATCATTAAGTCATAGTTCCTTTC
36% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
3UTR-3UTR TCA 90 bp TGTGTCAACTTCCAATACATGGAATTGTATTCTGACAACCTCTGTGAAAATCTTTCTCTTTCAAGAAAGTaGAATCTGTTCATCACCACT +
Preference number: 2 (lower is better)
Translates to: CVNFQYMELYSDNLCENLSLSRK*NLFITT
Trigger: AGTGGTGATGAACAGATTTCACTTTCTTGAAAGAGA...AAGATTTTCACAGAGGTTGTCAGAATACAATTCCATGTATTGGAAGTTGACACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
3UTR-3UTR CCA 90 bp TGTGTCAACTTCCAATACATGGAATTGTATTCTGACAACCTCTGTGAAAATCTTGTACTCACTGATAAGTaGATATTAGCCCAGAATCTT +
Preference number: 2 (lower is better)
Translates to: CVNFQYMELYSDNLCENLVLTDK*ILAQNL
Trigger: AAGATTCTGGGCTAATATCCACTTATCAGTGAGTAC...AAGATTTTCACAGAGGTTGTCAGAATACAATTCCATGTATTGGAAGTTGACACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
3UTR CCA 72 bp GTCCCTCCAGTTGAGGCCATGCCTATCTACTGGAGGTaGACTCTTCATGTTCCCTTTCCCCAGTGGTGGGCA +
Preference number: 3 (lower is better)
Translates to: VPPVEAMPIYWR*TLHVPFPQWWA
Trigger: TGCCCACCACTGGGGAAAGGGAACATGAAGAGTCCACCTCCAGTAGATAGGCATGGCCTCAACTGGAGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
3UTR GCA 72 bp CTAGGAGGACACCCCCAACCTCTCACTGTCCAAGGGTaGTTATTTCCATTCATTCTCTTGTCCCTCAGGGCT +
Preference number: 3 (lower is better)
Translates to: LGGHPQPLTVQG*LFPFILLSLRA
Trigger: AGCCCTGAGGGACAAGAGAATGAATGGAAATAAGCACCCTTGGACAGTGAGAGGTTGGGGGTGTCCTCCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
3UTR CCA 72 bp CAATTAGTCCTGAGAGTGTCTCCCCTCCAATGTCTCTaGCACATTCTAGGAGGACACCCCCAACCTCTCACT +
Preference number: 3 (lower is better)
Translates to: QLVLRVSPLQCL*HILGGHPQPLT
Trigger: AGTGAGAGGTTGGGGGTGTCCTCCTAGAATGTGCCAGAGACATTGGAGGGGAGACACTCTCAGGACTAATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
3UTR-3UTR CAA 90 bp CTCCAATGTCTCTGGCACATTCTAGGAGGACACCCCCAACCTCTCACTGTCCAATTTCCATTCATTCTCTaGTCCCTCAGGGCTTCTCTC +
Preference number: 3 (lower is better)
Translates to: LQCLWHILGGHPQPLTVQFPFIL*SLRASL
Trigger: GAGAGAAGCCCTGAGGGACAAGAGAATGAATGGAAA...TTGGACAGTGAGAGGTTGGGGGTGTCCTCCTAGAATGTGCCAGAGACATTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
3UTR GCA 72 bp GAGACTATGATGGGGCCTAGCAAACACAGAAGTGGATaGTCACAGTCAGCTATTGGATGGATCACAGGACCC +
Preference number: 3 (lower is better)
Translates to: ETMMGPSKHRSG*SQSAIGWITGP
Trigger: GGGTCCTGTGATCCATCCAATAGCTGACTGTGAGCATCCACTTCTGTGTTTGCTAGGCCCCATCATAGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
3UTR CCA 72 bp GGAGCATGTCTCCCTGTCACATGGTGGGGCATCTTTTaGGTATATGCCCAAGAGTGGTATAGCTGGTTCTAC +
Preference number: 3 (lower is better)
Translates to: GACLPVTWWGIF*VYAQEWYSWFY
Trigger: GTAGAACCAGCTATACCACTCTTGGGCATATACCCAAAAGATGCCCCACCATGTGACAGGGAGACATGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
3UTR TCA 72 bp TTGACTGTGGTTAGTAATCCTGTCTGTCCCTCCAGTTaGGGCCATGCCTATCTACTGGAGGTGGACTCTTCA +
Preference number: 3 (lower is better)
Translates to: LTVVSNPVCPSS*GHAYLLEVDSS
Trigger: TGAAGAGTCCACCTCCAGTAGATAGGCATGGCCTCAACTGGAGGGACAGACAGGATTACTAACCACAGTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
3UTR-3UTR CAA 90 bp TTTCTGCCTCAGTACAGGGGAATGCCAAGGCCAAGAAGTGGGAGTGGGTGGTGGACTATGAACACAATATaGGGAAGAGTGTATCAGAGA +
Preference number: 3 (lower is better)
Translates to: FLPQYRGMPRPRSGSGWWTMNTI*GRVYQR
Trigger: TCTCTGATACACTCTTCCCAATATTGTGTTCATAGT...CCACCACCCACTCCCACTTCTTGGCCTTGGCATTCCCCTGTACTGAGGCAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
3UTR-3UTR CAA 90 bp CTCCAATGTCTCTGGCACATTCTAGGAGGACACCCCCAACCTCTCACTGTCCAATTAAAGAGACACTGTTaGGAGCTGAGACAAAAGGAT +
Preference number: 3 (lower is better)
Translates to: LQCLWHILGGHPQPLTVQLKRHC*ELRQKD
Trigger: ATCCTTTTGTCTCAGCTCCAAACAGTGTCTCTTTAA...TTGGACAGTGAGAGGTTGGGGGTGTCCTCCTAGAATGTGCCAGAGACATTGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
3UTR GCA 72 bp TTGGAGCTGAGACAAAAGGATGGACCATCTAGAGACTaGCATATCCGGGGATCCATAATCAACTTCCAAACG +
Preference number: 3 (lower is better)
Translates to: LELRQKDGPSRD*HIRGSIINFQT
Trigger: CGTTTGGAAGTTGATTATGGATCCCCGGATATGGCAGTCTCTAGATGGTCCATCCTTTTGTCTCAGCTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
3UTR GCA 72 bp CTAGCTGGGAGTGAAGCTTCTTTACTTGGGCATTTTTaGTTCTTACACCTCCTCTGGTCTGTAGGATATATC +
Preference number: 3 (lower is better)
Translates to: LAGSEASLLGHF*FLHLLWSVGYI
Trigger: GATATATCCTACAGACCAGAGGAGGTGTAAGAAGCAAAAATGCCCAAGTAAAGAAGCTTCACTCCCAGCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
3UTR CCA 72 bp ATTCTGGCTATTACAAATAGGTTGCTATTAACATGGTaGAGCATGTCTCCCTGTCACATGGTGGGGCATCTT +
Preference number: 3 (lower is better)
Translates to: ILAITNRLLLTW*SMSPCHMVGHL
Trigger: AAGATGCCCCACCATGTGACAGGGAGACATGCTCCACCATGTTAATAGCAACCTATTTGTAATAGCCAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
3UTR TCA 72 bp CTTCCCCCATATGAGATGGATCACAATTTGGGTCAGTaGTTGAACCTTCTTCCCTTCAGTCTTTTCTCATTT +
Preference number: 3 (lower is better)
Translates to: LPPYEMDHNLGQ*LNLLPFSLFSF
Trigger: AAATGAGAAAAGACTGAAGGGAAGAAGGTTCAATCACTGACCCAAATTGTGATCCATCTCATATGGGGGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
3UTR CCA 72 bp CAGAATGGTTGTACCATTTTGCAATCCCACCAGCAATaGAAGTGTGTTTCTTTTTCTCAACATGCTAGCATA +
Preference number: 3 (lower is better)
Translates to: QNGCTILQSHQQ*KCVSFSQHASI
Trigger: TATGCTAGCATGTTGAGAAAAAGAAACACACTTCCATTGCTGGTGGGATTGCAAAATGGTACAACCATTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
3UTR CCA 72 bp TCTTTACTTGGGCATTTTTGCTTCTTACACCTCCTCTaGTCTGTAGGATATATCCTAGGTATTCGGTACTTT +
Preference number: 3 (lower is better)
Translates to: SLLGHFCFLHLL*SVGYILGIRYF
Trigger: AAAGTACCGAATACCTAGGATATATCCTACAGACCAGAGGAGGTGTAAGAAGCAAAAATGCCCAAGTAAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
3UTR TCA 72 bp TTTCTTTTTCTCAACATGCTAGCATATACTGTCACTTaGGGTTTTGATCTTAGCCATCCAGATTGGAGTGAG +
Preference number: 3 (lower is better)
Translates to: FLFLNMLAYTVT*GFDLSHPDWSE
Trigger: CTCACTCCAATCTGGATGGCTAAGATCAAAACCTCAAGTGACAGTATATGCTAGCATGTTGAGAAAAAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
3UTR TCA 72 bp ACTGAAGAGAATTTGTTCCATGCACCACTTAGATCCTaGGTATTTATTGACCTATGTGGAAGTTCTTTGGTT +
Preference number: 3 (lower is better)
Translates to: TEENLFHAPLRS*VFIDLCGSSLV
Trigger: AACCAAAGAACTTCCACATAGGTCAATAAATACTCAGGATCTAAGTGGTGCATGGAACAAATTCTCTTCAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
3UTR CCA 72 bp AATACAATGACAGCCACAATTGGTGGACAGAAATGGTaGAGAGTGAGAAATATAGCATCAAACATGAACAAA +
Preference number: 3 (lower is better)
Translates to: NTMTATIGGQKW*RVRNIASNMNK
Trigger: TTTGTTCATGTTTGATGCTATATTTCTCACTCTCCACCATTTCTGTCCACCAATTGTGGCTGTCATTGTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
3UTR CCA 72 bp AATAAAAAGAATGAATTTATGAAATTCCTAGTCAAATaGATGGACCTGGAGGGCATCATCCTGAGTGAGGTA +
Preference number: 3 (lower is better)
Translates to: NKKNEFMKFLVK*MDLEGIILSEV
Trigger: TACCTCACTCAGGATGATGCCCTCCAGGTCCATCCATTTGACTAGGAATTTCATAAATTCATTCTTTTTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
3UTR TCA 72 bp CTACTTTCCTACACAGGCTTCCCTGAGATGTTTTACTaGGTTGTTATTAGAAGTAATAAGGAATATGCTCAT +
Preference number: 3 (lower is better)
Translates to: LLSYTGFPEMFY*VVIRSNKEYAH
Trigger: ATGAGCATATTCCTTATTACTTCTAATAACAACTCAGTAAAACATCTCAGGGAAGCCTGTGTAGGAAAGTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
3UTR GCA 72 bp TCTTCAAGTGTATGCACTTTCTCCTATACTAGCCCTTaGTACAGTTATTTGTATCAGTCACAATCTCTTTAT +
Preference number: 3 (lower is better)
Translates to: SSSVCTFSYTSP*YSYLYQSQSLY
Trigger: ATAAAGAGATTGTGACTGATACAAATAACTGTAGCAAGGGCTAGTATAGGAGAAAGTGCATACACTTGAAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
3UTR CCA 72 bp TCAGAAGGTATCTATAGGGCTGGAAAGATTACTCAGTaGCTAAAATACATGTTATTTTCACAGAAGATTCAG +
Preference number: 3 (lower is better)
Translates to: SEGIYRAGKITQ*LKYMLFSQKIQ
Trigger: CTGAATCTTCTGTGAAAATAACATGTATTTTAGCCACTGAGTAATCTTTCCAGCCCTATAGATACCTTCTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
3UTR TCA 72 bp TCTATCAGGTTGCTTACAGCACCTATAAGAAATCTATaGTTTCATGGCATGACTTATATCTTTATCAGTGAG +
Preference number: 3 (lower is better)
Translates to: SIRLLTAPIRNL*FHGMTYIFISE
Trigger: CTCACTGATAAAGATATAAGTCATGCCATGAAATCATAGATTTCTTATAGGTGCTGTAAGCAACCTGATAGA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
CDS-3UTR CCA 90 bp GGGAATGCCAAGGCCAAGAAGTGGGAGTGGGTGGTGGGGAGTGTAGGTAGGGGAATCCCACCCAGGCTATaGCCACCAACACCCCACAGA +
Preference number: 4 (lower is better)
Translates to: GNAKAKKWEWVVGSVGRGIPPRL*PPTPHR
Trigger: TCTGTGGGGTGTTGGTGGCCATAGCCTGGGTGGGAT...TCCCCTACCTACACTCCCCACCACCCACTCCCACTTCTTGGCCTTGGCATTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
CDS-3UTR TCA 90 bp TTTCTGCCTCAGTACAGGGGAATGCCAAGGCCAAGAAGTGGGAGTGGGTGGTGGAAGAGACCATCAGCATaGGGAAACTCACTGTACAAA +
Preference number: 4 (lower is better)
Translates to: FLPQYRGMPRPRSGSGWWKRPSA*GNSLYK
Trigger: TTTGTACAGTGAGTTTCCTCATGCTGATGGTCTCTT...CCACCACCCACTCCCACTTCTTGGCCTTGGCATTCCCCTGTACTGAGGCAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
CDS-3UTR CCA 90 bp CTCCAATGTCTCTGGCACATTCTAGGAGGACACCCCCAACCTCTCACTGTCCAAGTCCACAATTGTTCTTaGAGCTATGGTTGTAGAGAA +
Preference number: 4 (lower is better)
Translates to: LQCLWHILGGHPQPLTVQVHNCS*SYGCRE
Trigger: TTCTCTACAACCATAGCTCCAAGAACAATTGTGGAC...TTGGACAGTGAGAGGTTGGGGGTGTCCTCCTAGAATGTGCCAGAGACATTGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
3UTR CAA 72 bp ATTTCTGAGGAACCACCAGATTCATTTCCAGAATGGTaGTACCATTTTGCAATCCCACCAGCAATGGAAGTG +
Preference number: 4 (lower is better)
Translates to: ISEEPPDSFPEW*YHFAIPPAMEV
Trigger: CACTTCCATTGCTGGTGGGATTGCAAAATGGTACAACCATTCTGGAAATGAATCTGGTGGTTCCTCAGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
CDS-3UTR TCA 90 bp GAGTTAAAGAGACACTGTTTGGAGCTGAGACAAAAGGATGGACCATCTAGAGACTTACTTTCGATCATCTaGGACCACTTTCTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: ELKRHCLELRQKDGPSRDLLSII*DHFLSP
Trigger: TGGAGAAAGAAAGTGGTCTCAGATGATCGAAAGTAA...GTCTCTAGATGGTCCATCCTTTTGTCTCAGCTCCAAACAGTGTCTCTTTAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
CDS-3UTR CCA 90 bp CATATAGAAGAGAGATTTCTTCAAGTGTATGCACTTTCTCCTATACTAGCCCTTGGACTCCCAAGGGTCTaGCTTGTCTTGATTGTAGCA +
Preference number: 4 (lower is better)
Translates to: HIEERFLQVYALSPILALGLPRV*LVLIVA
Trigger: TGCTACAATCAAGACAAGCCAGACCCTTGGGAGTCC...AAGGGCTAGTATAGGAGAAAGTGCATACACTTGAAGAAATCTCTCTTCTATATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
CDS-3UTR CCA 90 bp GAAAGGAACTATGACTTAATGATGTGTTCTTTTCAGAGACAGACACATTGTCTAACAGGAAGAAGTACATaGGACTCCCAAGGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: ERNYDLMMCSFQRQTHCLTGRST*DSQGSG
Trigger: GCCAGACCCTTGGGAGTCCCATGTACTTCTTCCTGT...TAGACAATGTGTCTGTCTCTGAAAAGAACACATCATTAAGTCATAGTTCCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
CDS-3UTR CCA 90 bp GAGTTAAAGAGACACTGTTTGGAGCTGAGACAAAAGGATGGACCATCTAGAGACATGACCACAATAATGTaGGATATGCAGGTAGATAGG +
Preference number: 4 (lower is better)
Translates to: ELKRHCLELRQKDGPSRDMTTIM*DMQVDR
Trigger: CCTATCTACCTGCATATCCCACATTATTGTGGTCAT...GTCTCTAGATGGTCCATCCTTTTGTCTCAGCTCCAAACAGTGTCTCTTTAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
3UTR CAA 72 bp AACCACCAGATTCATTTCCAGAATGGTTGTACCATTTaGCAATCCCACCAGCAATGGAAGTGTGTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: NHQIHFQNGCTI*QSHQQWKCVSF
Trigger: AAAAGAAACACACTTCCATTGCTGGTGGGATTGCAAAATGGTACAACCATTCTGGAAATGAATCTGGTGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
CDS-3UTR CCA 90 bp TGTGTCAACTTCCAATACATGGAATTGTATTCTGACAACCTCTGTGAAAATCTTCTCCCTTCAGCACTGTaGTTTCTTAGAGAACGAAGA +
Preference number: 4 (lower is better)
Translates to: CVNFQYMELYSDNLCENLLPSAL*FLRERR
Trigger: TCTTCGTTCTCTAAGAAACCACAGTGCTGAAGGGAG...AAGATTTTCACAGAGGTTGTCAGAATACAATTCCATGTATTGGAAGTTGACACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
CDS-3UTR TCA 90 bp TGTGTCAACTTCCAATACATGGAATTGTATTCTGACAACCTCTGTGAAAATCTTTGTAAATCAGAGGATTaGGCAAAGGTGTACCAATTG +
Preference number: 4 (lower is better)
Translates to: CVNFQYMELYSDNLCENLCKSED*AKVYQL
Trigger: CAATTGGTACACCTTTGCTCAATCCTCTGATTTACA...AAGATTTTCACAGAGGTTGTCAGAATACAATTCCATGTATTGGAAGTTGACACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
3UTR CAA 72 bp GATAGGATGTCTTGTGTCAACTTCCAATACATGGAATaGTATTCTGACAACCTCTGTGAAAATCTTCATAAC +
Preference number: 4 (lower is better)
Translates to: DRMSCVNFQYME*YSDNLCENLHN
Trigger: GTTATGAAGATTTTCACAGAGGTTGTCAGAATACAATTCCATGTATTGGAAGTTGACACAAGACATCCTATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
CDS-3UTR CAA 90 bp GAGTTAAAGAGACACTGTTTGGAGCTGAGACAAAAGGATGGACCATCTAGAGACCAAATGGCTCCACTGTaGGACACCAGAAGCAGGTTG +
Preference number: 5 (lower is better)
Translates to: ELKRHCLELRQKDGPSRDQMAPL*DTRSRL
Trigger: CAACCTGCTTCTGGTGTCCAACAGTGGAGCCATTTG...GTCTCTAGATGGTCCATCCTTTTGTCTCAGCTCCAAACAGTGTCTCTTTAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
CDS TCA 90 bp AACTCACTGTACAAATGGCTCCACTGTTGGACACCAGAAGCAGGTTaGTCAAATATGTGTCTGAACAGGCAAGCTTCAATAGTGGCTGCA +
Preference number: 5 (lower is better)
Translates to: NSLYKWLHCWTPEAG*SNMCLNRQASIVAA
Trigger: TGCAGCCACTATTGAAGCTTGCCTGTTCAGACACATATTTGATCAACCTGCTTCTGGTGTCCAACAGTGGAGCCATTTGTACAGTGAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099809.2
ENSMUST00000213136.2
CDS-3UTR CAA 90 bp GAGTTAAAGAGACACTGTTTGGAGCTGAGACAAAAGGATGGACCATCTAGAGACAGGGTCTGGCTTGTCTaGATTGTAGCAATGATAAGC +
Preference number: 5 (lower is better)
Translates to: ELKRHCLELRQKDGPSRDRVWLV*IVAMIS
Trigger: GCTTATCATTGCTACAATCAAGACAAGCCAGACCCT...GTCTCTAGATGGTCCATCCTTTTGTCTCAGCTCCAAACAGTGTCTCTTTAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213136.2
CDS CAA 90 bp AAACTCACTGTACAAATGGCTCCACTGTTGGACACCAGAAGCAGGTaGATCAAATATGTGTCTGAACAGGCAAGCTTCAATAGTGGCTGC +
Preference number: 6 (lower is better)
Translates to: KLTVQMAPLLDTRSR*IKYVSEQASFNSGC
Trigger: GCAGCCACTATTGAAGCTTGCCTGTTCAGACACATATTTGATCAACCTGCTTCTGGTGTCCAACAGTGGAGCCATTTGTACAGTGAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099809.2
ENSMUST00000213136.2
CDS CCA 72 bp AGAGGCTTCCTTAAGCAAAGAGTCCACAATTGTTCTTaGAGCTATGGTTGTAGAGAAGCAGGTGTCAGACAA +
Preference number: 6 (lower is better)
Translates to: RGFLKQRVHNCS*SYGCREAGVRQ
Trigger: TTGTCTGACACCTGCTTCTCTACAACCATAGCTCCAAGAACAATTGTGGACTCTTTGCTTAAGGAAGCCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099809.2
ENSMUST00000213136.2
CDS TCA 72 bp TACAAATGGCTCCACTGTTGGACACCAGAAGCAGGTTaGTCAAATATGTGTCTGAACAGGCAAGCTTCAATA +
Preference number: 6 (lower is better)
Translates to: YKWLHCWTPEAG*SNMCLNRQASI
Trigger: TATTGAAGCTTGCCTGTTCAGACACATATTTGATCAACCTGCTTCTGGTGTCCAACAGTGGAGCCATTTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099809.2
ENSMUST00000213136.2