Pregenerated sensors for OLFR1208 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075114Ensembl transcript IDs: ENSMUST00000099810.5, ENSMUST00000214121.2, ENSMUST00000214297.2
Found 46 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAAGGCAACAAAGTCTTACTCAGCTATTACACCTATAAACTACTTTaGCAACCACCCAGGCCTGATAATCCTAAGGGATACAATAGTAAT | + |
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Preference number: 1 (lower is better) Translates to: EGNKVLLSYYTYKLL*QPPRPDNPKGYNSN Trigger: ATTACTATTGTATCCCTTAGGATTATCAGGCCTGGGTGGTTGTCAAAGTAGTTTATAGGTGTAATAGCTGAGTAAGACTTTGTTGCCTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214121.2 ENSMUST00000214297.2 |
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| 3UTR CCA 90 bp | ATGATTACTGGGAGTTTAGCTAACTACAAAGTCCTAGTGAAATCATaGTTATTGGAAGAGAATCTACAAACACTAACCTACCAAACACTC | + |
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Preference number: 1 (lower is better) Translates to: MITGSLANYKVLVKS*LLEENLQTLTYQTL Trigger: GAGTGTTTGGTAGGTTAGTGTTTGTAGATTCTCTTCCAATAACCATGATTTCACTAGGACTTTGTAGTTAGCTAAACTCCCAGTAATCAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214121.2 ENSMUST00000214297.2 |
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| 3UTR-3UTR TCA 90 bp | ACTGGGAGTTTAGCTAACTACAAAGTCCTAGTGAAATCATGGTTATTGGAAGAGAGGGAGAAAAGACTGTaGGAGCTAGGGCATCGAGAA | + |
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Preference number: 2 (lower is better) Translates to: TGSLANYKVLVKSWLLEEREKRL*ELGHRE Trigger: TTCTCGATGCCCTAGCTCTCACAGTCTTTTCTCCCT...CTCTTCCAATAACCATGATTTCACTAGGACTTTGTAGTTAGCTAAACTCCCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214121.2 ENSMUST00000214297.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGGCCTGATAATCCTAAGGGATACAATAGTAATAAACAGCTTTCTCATTGGAAGGGAGAAAAGACTGTaGGAGCTAGGGCATCGAGAA | + |
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Preference number: 2 (lower is better) Translates to: PGLIILRDTIVINSFLIGREKRL*ELGHRE Trigger: TTCTCGATGCCCTAGCTCTCACAGTCTTTTCTCCCT...TCCAATGAGAAAGCTGTTTATTACTATTGTATCCCTTAGGATTATCAGGCCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214121.2 ENSMUST00000214297.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGGCCTGATAATCCTAAGGGATACAATAGTAATAAACAGCTTTCTCATTGGAAAATACTGGCACAACTaGGGCTCCAGCAATATTTCA | + |
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Preference number: 2 (lower is better) Translates to: PGLIILRDTIVINSFLIGKYWHN*GSSNIS Trigger: TGAAATATTGCTGGAGCCTCAGTTGTGCCAGTATTT...TCCAATGAGAAAGCTGTTTATTACTATTGTATCCCTTAGGATTATCAGGCCTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214121.2 ENSMUST00000214297.2 |
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| 3UTR-3UTR TCA 90 bp | ACTGGGAGTTTAGCTAACTACAAAGTCCTAGTGAAATCATGGTTATTGGAAGAGGCAACAAATGTGATATaGTTGGGACTTCTCTATCTA | + |
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Preference number: 2 (lower is better) Translates to: TGSLANYKVLVKSWLLEEATNVI*LGLLYL Trigger: TAGATAGAGAAGTCCCAATCATATCACATTTGTTGC...CTCTTCCAATAACCATGATTTCACTAGGACTTTGTAGTTAGCTAAACTCCCAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214121.2 ENSMUST00000214297.2 |
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| 3UTR-3UTR TCA 90 bp | ATCATGATGATTACTGGGAGTTTAGCTAACTACAAAGTCCTAGTGAAATCATGGGCAACAAATGTGATATaGTTGGGACTTCTCTATCTA | + |
|
Preference number: 2 (lower is better) Translates to: IMMITGSLANYKVLVKSWATNVI*LGLLYL Trigger: TAGATAGAGAAGTCCCAATCATATCACATTTGTTGC...CCATGATTTCACTAGGACTTTGTAGTTAGCTAAACTCCCAGTAATCATCATGAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214121.2 ENSMUST00000214297.2 |
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| 3UTR GCA 72 bp | AACAAATATGCTCTTTGGTGGGGAACACTTAGGCCATaGCTACCAGGAAGAAGGCAACAAAGTCTTACTCAG | + |
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Preference number: 3 (lower is better) Translates to: NKYALWWGTLRP*LPGRRQQSLTQ Trigger: CTGAGTAAGACTTTGTTGCCTTCTTCCTGGTAGGCATGGCCTAAGTGTTCCCCACCAAAGAGCATATTTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214121.2 ENSMUST00000214297.2 |
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| 3UTR TCA 72 bp | TCCAGCAATATTTCAAGAGAGAGGGAGAAAAGACTGTaGGAGCTAGGGCATCGAGAAGTATGCTTTAAGATG | + |
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Preference number: 3 (lower is better) Translates to: SSNISREREKRL*ELGHREVCFKM Trigger: CATCTTAAAGCATACTTCTCGATGCCCTAGCTCTCACAGTCTTTTCTCCCTCTCTCTTGAAATATTGCTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214121.2 ENSMUST00000214297.2 |
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| 3UTR-3UTR CAA 90 bp | CAACCACCCAGGCCTGATAATCCTAAGGGATACAATAGTAATAAACAGCTTTCTGAGGGCTTGAAATTTTaGTTGGCTATGCACCATCTT | + |
|
Preference number: 3 (lower is better) Translates to: QPPRPDNPKGYNSNKQLSEGLKF*LAMHHL Trigger: AAGATGGTGCATAGCCAACAAAAATTTCAAGCCCTC...AGAAAGCTGTTTATTACTATTGTATCCCTTAGGATTATCAGGCCTGGGTGGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214121.2 ENSMUST00000214297.2 |
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| 3UTR TCA 72 bp | AGTTTCAAGGGATATATCTACAAATACTGGCACAACTaGGGCTCCAGCAATATTTCAAGAGAGAGGGAGAAA | + |
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Preference number: 3 (lower is better) Translates to: SFKGYIYKYWHN*GSSNISREREK Trigger: TTTCTCCCTCTCTCTTGAAATATTGCTGGAGCCTCAGTTGTGCCAGTATTTGTAGATATATCCCTTGAAACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214121.2 ENSMUST00000214297.2 |
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| 3UTR TCA 72 bp | AAAGTCTTACTCAGCTATTACACCTATAAACTACTTTaGCAACCACCCAGGCCTGATAATCCTAAGGGATAC | + |
|
Preference number: 3 (lower is better) Translates to: KVLLSYYTYKLL*QPPRPDNPKGY Trigger: GTATCCCTTAGGATTATCAGGCCTGGGTGGTTGTCAAAGTAGTTTATAGGTGTAATAGCTGAGTAAGACTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214121.2 ENSMUST00000214297.2 |
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| 3UTR-3UTR CAA 90 bp | CCAGGCCTGATAATCCTAAGGGATACAATAGTAATAAACAGCTTTCTCATTGGAGGCTTGAAATTTTTGTaGGCTATGCACCATCTTGTT | + |
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Preference number: 3 (lower is better) Translates to: PGLIILRDTIVINSFLIGGLKFL*AMHHLV Trigger: AACAAGATGGTGCATAGCCAACAAAAATTTCAAGCC...TCCAATGAGAAAGCTGTTTATTACTATTGTATCCCTTAGGATTATCAGGCCTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214121.2 ENSMUST00000214297.2 |
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| 3UTR-3UTR CAA 90 bp | GGGAGTTTAGCTAACTACAAAGTCCTAGTGAAATCATGGTTATTGGAAGAGAATGAGGGCTTGAAATTTTaGTTGGCTATGCACCATCTT | + |
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Preference number: 3 (lower is better) Translates to: GSLANYKVLVKSWLLEENEGLKF*LAMHHL Trigger: AAGATGGTGCATAGCCAACAAAAATTTCAAGCCCTC...ATTCTCTTCCAATAACCATGATTTCACTAGGACTTTGTAGTTAGCTAAACTCCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214121.2 ENSMUST00000214297.2 |
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| 3UTR-3UTR CAA 90 bp | ATCATGATGATTACTGGGAGTTTAGCTAACTACAAAGTCCTAGTGAAATCATGGGGCTTGAAATTTTTGTaGGCTATGCACCATCTTGTT | + |
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Preference number: 3 (lower is better) Translates to: IMMITGSLANYKVLVKSWGLKFL*AMHHLV Trigger: AACAAGATGGTGCATAGCCAACAAAAATTTCAAGCC...CCATGATTTCACTAGGACTTTGTAGTTAGCTAAACTCCCAGTAATCATCATGAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214121.2 ENSMUST00000214297.2 |
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| 3UTR-3UTR CAA 90 bp | GGGAGTTTAGCTAACTACAAAGTCCTAGTGAAATCATGGTTATTGGAAGAGAATCCATTGATTTGGGACTaGTTTAGAGGGCTTGAAATT | + |
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Preference number: 3 (lower is better) Translates to: GSLANYKVLVKSWLLEENPLIWD*FRGLEI Trigger: AATTTCAAGCCCTCTAAACAAGTCCCAAATCAATGG...ATTCTCTTCCAATAACCATGATTTCACTAGGACTTTGTAGTTAGCTAAACTCCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214121.2 ENSMUST00000214297.2 |
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| 3UTR CCA 72 bp | GGGAGTTTAGCTAACTACAAAGTCCTAGTGAAATCATaGTTATTGGAAGAGAATCTACAAACACTAACCTAC | + |
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Preference number: 3 (lower is better) Translates to: GSLANYKVLVKS*LLEENLQTLTY Trigger: GTAGGTTAGTGTTTGTAGATTCTCTTCCAATAACCATGATTTCACTAGGACTTTGTAGTTAGCTAAACTCCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214121.2 ENSMUST00000214297.2 |
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| CDS-3UTR CCA 90 bp | CAACCACCCAGGCCTGATAATCCTAAGGGATACAATAGTAATAAACAGCTTTCTGGCTCTCTGATGACCTaGTCCTCAAGATGGACAAAA | + |
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Preference number: 4 (lower is better) Translates to: QPPRPDNPKGYNSNKQLSGSLMT*SSRWTK Trigger: TTTTGTCCATCTTGAGGACCAGGTCATCAGAGAGCC...AGAAAGCTGTTTATTACTATTGTATCCCTTAGGATTATCAGGCCTGGGTGGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214121.2 ENSMUST00000214297.2 |
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| CDS-3UTR TCA 90 bp | ACTGGGAGTTTAGCTAACTACAAAGTCCTAGTGAAATCATGGTTATTGGAAGAGGGCTGCTCACTAAGTTaGCTGCCCTTGATAGTAAGA | + |
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Preference number: 4 (lower is better) Translates to: TGSLANYKVLVKSWLLEEGCSLS*LPLIVR Trigger: TCTTACTATCAAGGGCAGTCAACTTAGTGAGCAGCC...CTCTTCCAATAACCATGATTTCACTAGGACTTTGTAGTTAGCTAAACTCCCAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214121.2 ENSMUST00000214297.2 |
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| CDS-3UTR TCA 90 bp | GGGAGTTTAGCTAACTACAAAGTCCTAGTGAAATCATGGTTATTGGAAGAGAATGGCTGCTCACTAAGTTaGCTGCCCTTGATAGTAAGA | + |
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Preference number: 4 (lower is better) Translates to: GSLANYKVLVKSWLLEENGCSLS*LPLIVR Trigger: TCTTACTATCAAGGGCAGTCAACTTAGTGAGCAGCC...ATTCTCTTCCAATAACCATGATTTCACTAGGACTTTGTAGTTAGCTAAACTCCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214121.2 ENSMUST00000214297.2 |
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| CDS-3UTR CCA 90 bp | GGGAGTTTAGCTAACTACAAAGTCCTAGTGAAATCATGGTTATTGGAAGAGAATGGCTCTCTGATGACCTaGTCCTCAAGATGGACAAAA | + |
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Preference number: 4 (lower is better) Translates to: GSLANYKVLVKSWLLEENGSLMT*SSRWTK Trigger: TTTTGTCCATCTTGAGGACCAGGTCATCAGAGAGCC...ATTCTCTTCCAATAACCATGATTTCACTAGGACTTTGTAGTTAGCTAAACTCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214121.2 ENSMUST00000214297.2 |
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| CDS-3UTR CCA 90 bp | ACTGGGAGTTTAGCTAACTACAAAGTCCTAGTGAAATCATGGTTATTGGAAGAGTCAAAGAGTTTGTCTTaGCACCACACCTTCCTCATG | + |
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Preference number: 4 (lower is better) Translates to: TGSLANYKVLVKSWLLEESKSLS*HHTFLM Trigger: CATGAGGAAGGTGTGGTGCCAAGACAAACTCTTTGA...CTCTTCCAATAACCATGATTTCACTAGGACTTTGTAGTTAGCTAAACTCCCAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214121.2 ENSMUST00000214297.2 |
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| CDS-3UTR GCA 90 bp | CAACCACCCAGGCCTGATAATCCTAAGGGATACAATAGTAATAAACAGCTTTCTCAACACAGCACATATTaGCTTGACATCCTCATTATG | + |
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Preference number: 4 (lower is better) Translates to: QPPRPDNPKGYNSNKQLSQHSTY*LDILIM Trigger: CATAATGAGGATGTCAAGGCAATATGTGCTGTGTTG...AGAAAGCTGTTTATTACTATTGTATCCCTTAGGATTATCAGGCCTGGGTGGTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214121.2 ENSMUST00000214297.2 |
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| CDS-3UTR GCA 90 bp | ACTGGGAGTTTAGCTAACTACAAAGTCCTAGTGAAATCATGGTTATTGGAAGAGGGCACCAAAGAAGTGTaGATAAAACATCTGGGCTAT | + |
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Preference number: 4 (lower is better) Translates to: TGSLANYKVLVKSWLLEEGTKEV*IKHLGY Trigger: ATAGCCCAGATGTTTTATGCACACTTCTTTGGTGCC...CTCTTCCAATAACCATGATTTCACTAGGACTTTGTAGTTAGCTAAACTCCCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214121.2 ENSMUST00000214297.2 |
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| CDS-3UTR CCA 90 bp | CCAGGCCTGATAATCCTAAGGGATACAATAGTAATAAACAGCTTTCTCATTGGAGAGAGGGTTGAACAATaGGGCAATCATGGTGTAAAA | + |
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Preference number: 4 (lower is better) Translates to: PGLIILRDTIVINSFLIGERVEQ*GNHGVK Trigger: TTTTACACCATGATTGCCCCATTGTTCAACCCTCTC...TCCAATGAGAAAGCTGTTTATTACTATTGTATCCCTTAGGATTATCAGGCCTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214121.2 ENSMUST00000214297.2 |
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| CDS-3UTR CCA 90 bp | CCAGGCCTGATAATCCTAAGGGATACAATAGTAATAAACAGCTTTCTCATTGGAACCACACCTTCCTCATaGCATTCTTCATGTCTGTAT | + |
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Preference number: 4 (lower is better) Translates to: PGLIILRDTIVINSFLIGTTPSS*HSSCLY Trigger: ATACAGACATGAAGAATGCCATGAGGAAGGTGTGGT...TCCAATGAGAAAGCTGTTTATTACTATTGTATCCCTTAGGATTATCAGGCCTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214121.2 ENSMUST00000214297.2 |
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| CDS-3UTR TCA 90 bp | ACTGGGAGTTTAGCTAACTACAAAGTCCTAGTGAAATCATGGTTATTGGAAGAGCAGTACATGCACAAGTaGGTGTATAAAAGCACCAAA | + |
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Preference number: 4 (lower is better) Translates to: TGSLANYKVLVKSWLLEEQYMHK*VYKSTK Trigger: TTTGGTGCTTTTATACACTCACTTGTGCATGTACTG...CTCTTCCAATAACCATGATTTCACTAGGACTTTGTAGTTAGCTAAACTCCCAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214121.2 ENSMUST00000214297.2 |
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| CDS-3UTR GCA 90 bp | CAACCACCCAGGCCTGATAATCCTAAGGGATACAATAGTAATAAACAGCTTTCTGTAAGAAATGACCAATaGAACAAAGGTCAGAATGGA | + |
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Preference number: 4 (lower is better) Translates to: QPPRPDNPKGYNSNKQLSVRNDQ*NKGQNG Trigger: TCCATTCTGACCTTTGTTGCATTGGTCATTTCTTAC...AGAAAGCTGTTTATTACTATTGTATCCCTTAGGATTATCAGGCCTGGGTGGTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214121.2 ENSMUST00000214297.2 |
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| CDS-3UTR CCA 90 bp | GGGAGTTTAGCTAACTACAAAGTCCTAGTGAAATCATGGTTATTGGAAGAGAATGAGAGGGTTGAACAATaGGGCAATCATGGTGTAAAA | + |
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Preference number: 4 (lower is better) Translates to: GSLANYKVLVKSWLLEENERVEQ*GNHGVK Trigger: TTTTACACCATGATTGCCCCATTGTTCAACCCTCTC...ATTCTCTTCCAATAACCATGATTTCACTAGGACTTTGTAGTTAGCTAAACTCCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214121.2 ENSMUST00000214297.2 |
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| CDS-3UTR CCA 90 bp | GGGAGTTTAGCTAACTACAAAGTCCTAGTGAAATCATGGTTATTGGAAGAGAATACCACACCTTCCTCATaGCATTCTTCATGTCTGTAT | + |
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Preference number: 4 (lower is better) Translates to: GSLANYKVLVKSWLLEENTTPSS*HSSCLY Trigger: ATACAGACATGAAGAATGCCATGAGGAAGGTGTGGT...ATTCTCTTCCAATAACCATGATTTCACTAGGACTTTGTAGTTAGCTAAACTCCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214121.2 ENSMUST00000214297.2 |
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| CDS-3UTR TCA 90 bp | ATCATGATGATTACTGGGAGTTTAGCTAACTACAAAGTCCTAGTGAAATCATGGCAGTACATGCACAAGTaGGTGTATAAAAGCACCAAA | + |
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Preference number: 4 (lower is better) Translates to: IMMITGSLANYKVLVKSWQYMHK*VYKSTK Trigger: TTTGGTGCTTTTATACACTCACTTGTGCATGTACTG...CCATGATTTCACTAGGACTTTGTAGTTAGCTAAACTCCCAGTAATCATCATGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214121.2 ENSMUST00000214297.2 |
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| CDS-3UTR GCA 90 bp | ATCATGATGATTACTGGGAGTTTAGCTAACTACAAAGTCCTAGTGAAATCATGGCAACACAGCACATATTaGCTTGACATCCTCATTATG | + |
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Preference number: 4 (lower is better) Translates to: IMMITGSLANYKVLVKSWQHSTY*LDILIM Trigger: CATAATGAGGATGTCAAGGCAATATGTGCTGTGTTG...CCATGATTTCACTAGGACTTTGTAGTTAGCTAAACTCCCAGTAATCATCATGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214121.2 ENSMUST00000214297.2 |
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| CDS-3UTR GCA 90 bp | ACTGGGAGTTTAGCTAACTACAAAGTCCTAGTGAAATCATGGTTATTGGAAGAGGTTTCCACAGAGAATTaGAAGATAGCAAAGCAAGAA | + |
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Preference number: 4 (lower is better) Translates to: TGSLANYKVLVKSWLLEEVSTEN*KIAKQE Trigger: TTCTTGCTTTGCTATCTTGCAATTCTCTGTGGAAAC...CTCTTCCAATAACCATGATTTCACTAGGACTTTGTAGTTAGCTAAACTCCCAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214121.2 ENSMUST00000214297.2 |
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| CDS-3UTR CCA 90 bp | CAACCACCCAGGCCTGATAATCCTAAGGGATACAATAGTAATAAACAGCTTTCTTTGACATCCTCATTATaGAAAAGTCCCAGTAAGATA | + |
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Preference number: 4 (lower is better) Translates to: QPPRPDNPKGYNSNKQLSLTSSL*KSPSKI Trigger: TATCTTACTGGGACTTTTCCATAATGAGGATGTCAA...AGAAAGCTGTTTATTACTATTGTATCCCTTAGGATTATCAGGCCTGGGTGGTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214121.2 ENSMUST00000214297.2 |
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| CDS-3UTR CCA 90 bp | GGGAGTTTAGCTAACTACAAAGTCCTAGTGAAATCATGGTTATTGGAAGAGAATACAATGGGGCAATCATaGTGTAAAACAGAGCAAACA | + |
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Preference number: 4 (lower is better) Translates to: GSLANYKVLVKSWLLEENTMGQS*CKTEQT Trigger: TGTTTGCTCTGTTTTACACCATGATTGCCCCATTGT...ATTCTCTTCCAATAACCATGATTTCACTAGGACTTTGTAGTTAGCTAAACTCCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214121.2 ENSMUST00000214297.2 |
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| CDS-3UTR GCA 90 bp | GGGAGTTTAGCTAACTACAAAGTCCTAGTGAAATCATGGTTATTGGAAGAGAATGTTTCCACAGAGAATTaGAAGATAGCAAAGCAAGAA | + |
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Preference number: 4 (lower is better) Translates to: GSLANYKVLVKSWLLEENVSTEN*KIAKQE Trigger: TTCTTGCTTTGCTATCTTGCAATTCTCTGTGGAAAC...ATTCTCTTCCAATAACCATGATTTCACTAGGACTTTGTAGTTAGCTAAACTCCC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214121.2 ENSMUST00000214297.2 |
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| CDS-3UTR GCA 90 bp | GGGAGTTTAGCTAACTACAAAGTCCTAGTGAAATCATGGTTATTGGAAGAGAATGTAAGAAATGACCAATaGAACAAAGGTCAGAATGGA | + |
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Preference number: 4 (lower is better) Translates to: GSLANYKVLVKSWLLEENVRNDQ*NKGQNG Trigger: TCCATTCTGACCTTTGTTGCATTGGTCATTTCTTAC...ATTCTCTTCCAATAACCATGATTTCACTAGGACTTTGTAGTTAGCTAAACTCCC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214121.2 ENSMUST00000214297.2 |
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| CDS-3UTR CCA 90 bp | ATCATGATGATTACTGGGAGTTTAGCTAACTACAAAGTCCTAGTGAAATCATGGTTGACATCCTCATTATaGAAAAGTCCCAGTAAGATA | + |
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Preference number: 4 (lower is better) Translates to: IMMITGSLANYKVLVKSWLTSSL*KSPSKI Trigger: TATCTTACTGGGACTTTTCCATAATGAGGATGTCAA...CCATGATTTCACTAGGACTTTGTAGTTAGCTAAACTCCCAGTAATCATCATGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214121.2 ENSMUST00000214297.2 |
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| CDS CCA 90 bp | GTAAAACAGAGCAAACACCTTGTCGTCCCCAACAGAATCACCCATTaGGACATAGGTAAAGATGAGTGGCAAGAAGAACATGAATACAAC | + |
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Preference number: 5 (lower is better) Translates to: VKQSKHLVVPNRITH*DIGKDEWQEEHEYN Trigger: GTTGTATTCATGTTCTTCTTGCCACTCATCTTTACCTATGTCCCAATGGGTGATTCTGTTGGGGACGACAAGGTGTTTGCTCTGTTTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099810.5 ENSMUST00000214121.2 ENSMUST00000214297.2 |
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| CDS GCA 90 bp | ATATCTCAGTGGCACCAAAGAAGTGTGCATAAAACATCTGGGCTATaGAGCCATTGTAGGAGATTGTGTTACATTGTACCAATAGGCCTA | + |
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Preference number: 5 (lower is better) Translates to: ISQWHQRSVHKTSGL*SHCRRLCYIVPIGL Trigger: TAGGCCTATTGGTACAATGTAACACAATCTCCTACAATGGCTGCATAGCCCAGATGTTTTATGCACACTTCTTTGGTGCCACTGAGATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099810.5 ENSMUST00000214121.2 ENSMUST00000214297.2 |
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| CDS-3UTR CAA 90 bp | ACTGGGAGTTTAGCTAACTACAAAGTCCTAGTGAAATCATGGTTATTGGAAGAGTTCAAAGAGTTTGTCTaGGCACCACACCTTCCTCAT | + |
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Preference number: 5 (lower is better) Translates to: TGSLANYKVLVKSWLLEEFKEFV*APHLPH Trigger: ATGAGGAAGGTGTGGTGCCAAGACAAACTCTTTGAA...CTCTTCCAATAACCATGATTTCACTAGGACTTTGTAGTTAGCTAAACTCCCAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214121.2 ENSMUST00000214297.2 |
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| CDS-3UTR CAA 90 bp | CAACCACCCAGGCCTGATAATCCTAAGGGATACAATAGTAATAAACAGCTTTCTACAGCACATATTGCCTaGACATCCTCATTATGGAAA | + |
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Preference number: 5 (lower is better) Translates to: QPPRPDNPKGYNSNKQLSTAHIA*TSSLWK Trigger: TTTCCATAATGAGGATGTCAAGGCAATATGTGCTGT...AGAAAGCTGTTTATTACTATTGTATCCCTTAGGATTATCAGGCCTGGGTGGTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214121.2 ENSMUST00000214297.2 |
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| CDS-3UTR CAA 90 bp | CCAGGCCTGATAATCCTAAGGGATACAATAGTAATAAACAGCTTTCTCATTGGAGGTTTCCACAGAGAATaGCAAGATAGCAAAGCAAGA | + |
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Preference number: 5 (lower is better) Translates to: PGLIILRDTIVINSFLIGGFHRE*QDSKAR Trigger: TCTTGCTTTGCTATCTTGCAATTCTCTGTGGAAACC...TCCAATGAGAAAGCTGTTTATTACTATTGTATCCCTTAGGATTATCAGGCCTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214121.2 ENSMUST00000214297.2 |
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| CDS-3UTR CAA 90 bp | ATCATGATGATTACTGGGAGTTTAGCTAACTACAAAGTCCTAGTGAAATCATGGGGTTTCCACAGAGAATaGCAAGATAGCAAAGCAAGA | + |
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Preference number: 5 (lower is better) Translates to: IMMITGSLANYKVLVKSWGFHRE*QDSKAR Trigger: TCTTGCTTTGCTATCTTGCAATTCTCTGTGGAAACC...CCATGATTTCACTAGGACTTTGTAGTTAGCTAAACTCCCAGTAATCATCATGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214121.2 ENSMUST00000214297.2 |
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| CDS-3UTR CAA 90 bp | ATCATGATGATTACTGGGAGTTTAGCTAACTACAAAGTCCTAGTGAAATCATGGACAGCACATATTGCCTaGACATCCTCATTATGGAAA | + |
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Preference number: 5 (lower is better) Translates to: IMMITGSLANYKVLVKSWTAHIA*TSSLWK Trigger: TTTCCATAATGAGGATGTCAAGGCAATATGTGCTGT...CCATGATTTCACTAGGACTTTGTAGTTAGCTAAACTCCCAGTAATCATCATGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214121.2 ENSMUST00000214297.2 |
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| CDS CCA 72 bp | AACAACACAGCACATATTGCCTTGACATCCTCATTATaGAAAAGTCCCAGTAAGATAAATTCTGTAAGGTTT | + |
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Preference number: 6 (lower is better) Translates to: NNTAHIALTSSL*KSPSKINSVRF Trigger: AAACCTTACAGAATTTATCTTACTGGGACTTTTCCATAATGAGGATGTCAAGGCAATATGTGCTGTGTTGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099810.5 ENSMUST00000214121.2 ENSMUST00000214297.2 |
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