Pregenerated sensors for OLFR1205 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000057447Ensembl transcript IDs: ENSMUST00000076438.2, ENSMUST00000215929.2
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCAAACACTATGGTAGATTCCAACAAGATCCTGCTGTCAGGAGCCTaGTATAGCTGTCTCCTGAGAGGCTCTGCCAGTGCCTGGCAAAAC | + |
|
Preference number: 1 (lower is better) Translates to: PNTMVDSNKILLSGA*YSCLLRGSASAWQN Trigger: GTTTTGCCAGGCACTGGCAGAGCCTCTCAGGAGACAGCTATATCAGGCTCCTGACAGCAGGATCTTGTTGGAATCTACCATAGTGTTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215929.2 |
||
| 3UTR GCA 90 bp | GTTTGGAGGAGTTCTTCAAACAGGAACAAGAGGAAGAATGAGGAGTaGCCTTTTGACACCCTGGTCCGTCATTGCCCCTGGTACATGATG | + |
|
Preference number: 1 (lower is better) Translates to: VWRSSSNRNKRKNEE*PFDTLVRHCPWYMM Trigger: CATCATGTACCAGGGGCAATGACGGACCAGGGTGTCAAAAGGGCACTCCTCATTCTTCCTCTTGTTCCTGTTTGAAGAACTCCTCCAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215929.2 |
||
| 3UTR CCA 90 bp | ACACATGGTGGGACTGGTAGCTATAGTTGCATATGTAGCAGAGCATaGCCTAGTTGGTCATCAATGGGAGGAGAGTTCCTAGGTCCTGTG | + |
|
Preference number: 1 (lower is better) Translates to: THGGTGSYSCICSRA*PSWSSMGGEFLGPV Trigger: CACAGGACCTAGGAACTCTCCTCCCATTGATGACCAACTAGGCCATGCTCTGCTACATATGCAACTATAGCTACCAGTCCCACCATGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215929.2 |
||
| 3UTR CCA 90 bp | GCAGAATGCACAGAGAGTATCCCAAGGGAACTTAGGCTGGCAGCTTaGACCCACTACTTGCCTTCCAGTAGTTTCTTTTCACAGATCCCA | + |
|
Preference number: 1 (lower is better) Translates to: AECTESIPRELRLAA*THYLPSSSFFSQIP Trigger: TGGGATCTGTGAAAAGAAACTACTGGAAGGCAAGTAGTGGGTCCAAGCTGCCAGCCTAAGTTCCCTTGGGATACTCTCTGTGCATTCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215929.2 |
||
| 3UTR GCA 90 bp | AGAGTATCCCAAGGGAACTTAGGCTGGCAGCTTGGACCCACTACTTaGCTTCCAGTAGTTTCTTTTCACAGATCCCAAACAACCCTTCTC | + |
|
Preference number: 1 (lower is better) Translates to: RVSQGNLGWQLGPTT*LPVVSFHRSQTTLL Trigger: GAGAAGGGTTGTTTGGGATCTGTGAAAAGAAACTACTGGAAGGCAAGTAGTGGGTCCAAGCTGCCAGCCTAAGTTCCCTTGGGATACTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215929.2 |
||
| 3UTR CCA 90 bp | GGGACTGGTAGCTATAGTTGCATATGTAGCAGAGCATGGCCTAGTTaGTCATCAATGGGAGGAGAGTTCCTAGGTCCTGTGAAGGTTCTA | + |
|
Preference number: 1 (lower is better) Translates to: GTGSYSCICSRAWPS*SSMGGEFLGPVKVL Trigger: TAGAACCTTCACAGGACCTAGGAACTCTCCTCCCATTGATGACCAACTAGGCCATGCTCTGCTACATATGCAACTATAGCTACCAGTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215929.2 |
||
| 3UTR CCA 90 bp | AAGAATGAGGAGTGCCCTTTTGACACCCTGGTCCGTCATTGCCCCTaGTACATGATGAAGAGAAACCTGAAGACTTCATTGCAAATGGAC | + |
|
Preference number: 1 (lower is better) Translates to: KNEECPFDTLVRHCP*YMMKRNLKTSLQMD Trigger: GTCCATTTGCAATGAAGTCTTCAGGTTTCTCTTCATCATGTACCAGGGGCAATGACGGACCAGGGTGTCAAAAGGGCACTCCTCATTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215929.2 |
||
| 3UTR GCA 90 bp | AAGCACCAATCAAGAAAAACACATGGTGGGACTGGTAGCTATAGTTaGATATGTAGCAGAGCATGGCCTAGTTGGTCATCAATGGGAGGA | + |
|
Preference number: 1 (lower is better) Translates to: KHQSRKTHGGTGSYS*ICSRAWPSWSSMGG Trigger: TCCTCCCATTGATGACCAACTAGGCCATGCTCTGCTACATATGCAACTATAGCTACCAGTCCCACCATGTGTTTTTCTTGATTGGTGCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215929.2 |
||
| 3UTR GCA 90 bp | TGGGTAACTTCAGGGCAGGGTCCCAGCCAGTTAGCTCATGACCTGTaGTTATCAGAGACAAGCAGATCTCTGATATTTTTACAATGTTCA | + |
|
Preference number: 1 (lower is better) Translates to: WVTSGQGPSQLAHDL*LSETSRSLIFLQCS Trigger: TGAACATTGTAAAAATATCAGAGATCTGCTTGTCTCTGATAAGCACAGGTCATGAGCTAACTGGCTGGGACCCTGCCCTGAAGTTACCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215929.2 |
||
| 3UTR CCA 90 bp | ATCCCAAACAACCCTTCTCTCAGGAACCTGTCTCCAAGACAAACCTaGTCCTTGGCAGTAATGGGTTTGGGTGATCAAAGATTAAGTAAC | + |
|
Preference number: 1 (lower is better) Translates to: IPNNPSLRNLSPRQT*SLAVMGLGDQRLSN Trigger: GTTACTTAATCTTTGATCACCCAAACCCATTACTGCCAAGGACCAGGTTTGTCTTGGAGACAGGTTCCTGAGAGAAGGGTTGTTTGGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215929.2 |
||
| 3UTR TCA 90 bp | CCTGTCTTGTACAGTGGCAGTTATGGAGCATCTGCTGGATTGTATTaGATTGATTTCAAATTACTTGTTTACTTGCTACATAATTACGTC | + |
|
Preference number: 1 (lower is better) Translates to: PVLYSGSYGASAGLY*IDFKLLVYLLHNYV Trigger: GACGTAATTATGTAGCAAGTAAACAAGTAATTTGAAATCAATTCAATACAATCCAGCAGATGCTCCATAACTGCCACTGTACAAGACAGG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215929.2 |
||
| 3UTR-3UTR GCA 90 bp | GAGCACAGGGTCTCCAGTGAAGGAGCTAAAGTACCCAAGGAGCTGAAGGGTTTTCCCAGTATAGGGGAATaGCAGGATCAGGAATGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: EHRVSSEGAKVPKELKGFPSIGE*QDQEWE Trigger: CTCCCATTCCTGATCCTGGCATTCCCCTATACTGGG...AAAACCCTTCAGCTCCTTGGGTACTTTAGCTCCTTCACTGGAGACCCTGTGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215929.2 |
||
| 3UTR-3UTR TCA 90 bp | CTGGTAGCTATAGTTGCATATGTAGCAGAGCATGGCCTAGTTGGTCATCAATGGGATCAGGAATGGGAGTaGGTGGGTTGGGGAGTTGGG | + |
|
Preference number: 2 (lower is better) Translates to: LVAIVAYVAEHGLVGHQWDQEWE*VGWGVG Trigger: CCCAACTCCCCAACCCACTCACTCCCATTCCTGATC...CCATTGATGACCAACTAGGCCATGCTCTGCTACATATGCAACTATAGCTACCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215929.2 |
||
| 3UTR CAA 90 bp | GAGAGTATCCCAAGGGAACTTAGGCTGGCAGCTTGGACCCACTACTaGCCTTCCAGTAGTTTCTTTTCACAGATCCCAAACAACCCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: ESIPRELRLAAWTHY*PSSSFFSQIPNNPS Trigger: AGAAGGGTTGTTTGGGATCTGTGAAAAGAAACTACTGGAAGGCAAGTAGTGGGTCCAAGCTGCCAGCCTAAGTTCCCTTGGGATACTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215929.2 |
||
| 3UTR-3UTR CCA 90 bp | GAGCACAGGGTCTCCAGTGAAGGAGCTAAAGTACCCAAGGAGCTGAAGGGTTTTGTACAGTGGCAGTTATaGAGCATCTGCTGGATTGTA | + |
|
Preference number: 2 (lower is better) Translates to: EHRVSSEGAKVPKELKGFVQWQL*SICWIV Trigger: TACAATCCAGCAGATGCTCCATAACTGCCACTGTAC...AAAACCCTTCAGCTCCTTGGGTACTTTAGCTCCTTCACTGGAGACCCTGTGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215929.2 |
||
| 3UTR CAA 90 bp | AACAACCCTTCTCTCAGGAACCTGTCTCCAAGACAAACCTGGTCCTaGGCAGTAATGGGTTTGGGTGATCAAAGATTAAGTAACAGAACC | + |
|
Preference number: 2 (lower is better) Translates to: NNPSLRNLSPRQTWS*AVMGLGDQRLSNRT Trigger: GGTTCTGTTACTTAATCTTTGATCACCCAAACCCATTACTGCCAAGGACCAGGTTTGTCTTGGAGACAGGTTCCTGAGAGAAGGGTTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215929.2 |
||
| 3UTR-3UTR TCA 90 bp | TTACAATGTTCAAAGAAACTGTATACTTGCTGTTTCCTTAGAAATAAGGGGCCAGATATAGCTGTCTCCTaGGAGGCTCTGCCAGTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: LQCSKKLYTCCFLRNKGPDIAVS*EALPVP Trigger: AGGCACTGGCAGAGCCTCTCAGGAGACAGCTATATC...TGGCCCCTTATTTCTAAGGAAACAGCAAGTATACAGTTTCTTTGAACATTGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215929.2 |
||
| 3UTR-3UTR GCA 90 bp | CTGGTAGCTATAGTTGCATATGTAGCAGAGCATGGCCTAGTTGGTCATCAATGGTTCTTCACAGAAAAGTaGTTTACTGCAGACCAACAT | + |
|
Preference number: 2 (lower is better) Translates to: LVAIVAYVAEHGLVGHQWFFTEK*FTADQH Trigger: ATGTTGGTCTGCAGTAAAGCACTTTTCTGTGAAGAA...CCATTGATGACCAACTAGGCCATGCTCTGCTACATATGCAACTATAGCTACCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215929.2 |
||
| 3UTR-3UTR CCA 90 bp | TTACAATGTTCAAAGAAACTGTATACTTGCTGTTTCCTTAGAAATAAGGGGCCAGGCTCTGCCAGTGCCTaGCAAAACAGAAGTAGATGC | + |
|
Preference number: 2 (lower is better) Translates to: LQCSKKLYTCCFLRNKGPGSASA*QNRSRC Trigger: GCATCTACTTCTGTTTTGCCAGGCACTGGCAGAGCC...TGGCCCCTTATTTCTAAGGAAACAGCAAGTATACAGTTTCTTTGAACATTGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215929.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGGTAGCTATAGTTGCATATGTAGCAGAGCATGGCCTAGTTGGTCATCAATGGGCAACTTTTAAAAATTaGGAACTACCAGCTAAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: LVAIVAYVAEHGLVGHQWATFKN*ELPAKK Trigger: CTTCTTAGCTGGTAGTTCCCAATTTTTAAAAGTTGC...CCATTGATGACCAACTAGGCCATGCTCTGCTACATATGCAACTATAGCTACCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215929.2 |
||
| 3UTR-3UTR TCA 90 bp | TTGGCAGTAATGGGTTTGGGTGATCAAAGATTAAGTAACAGAACCACAGCTAACAAAAAGGATACCTGTTaGACAGGAGTTTTACCAGTT | + |
|
Preference number: 2 (lower is better) Translates to: LAVMGLGDQRLSNRTTANKKDTC*TGVLPV Trigger: AACTGGTAAAACTCCTGTTCAACAGGTATCCTTTTT...GTTAGCTGTGGTTCTGTTACTTAATCTTTGATCACCCAAACCCATTACTGCCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215929.2 |
||
| 3UTR-3UTR TCA 90 bp | TTACAATGTTCAAAGAAACTGTATACTTGCTGTTTCCTTAGAAATAAGGGGCCATGTGTGAAAATAATGTaGGCCAGGCAGTTGTGGATG | + |
|
Preference number: 2 (lower is better) Translates to: LQCSKKLYTCCFLRNKGPCVKIM*ARQLWM Trigger: CATCCACAACTGCCTGGCTCACATTATTTTCACACA...TGGCCCCTTATTTCTAAGGAAACAGCAAGTATACAGTTTCTTTGAACATTGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215929.2 |
||
| 3UTR-3UTR TCA 90 bp | TTGGCAGTAATGGGTTTGGGTGATCAAAGATTAAGTAACAGAACCACAGCTAACCATGACTCCATTCATTaGTGCTGTATGGATGTATTA | + |
|
Preference number: 2 (lower is better) Translates to: LAVMGLGDQRLSNRTTANHDSIH*CCMDVL Trigger: TAATACATCCATACAGCATCAATGAATGGAGTCATG...GTTAGCTGTGGTTCTGTTACTTAATCTTTGATCACCCAAACCCATTACTGCCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215929.2 |
||
| 3UTR-3UTR CCA 90 bp | TTGGCAGTAATGGGTTTGGGTGATCAAAGATTAAGTAACAGAACCACAGCTAACTCAGAACTTTATTCTTaGACTTTCCTGAGGGTAAAT | + |
|
Preference number: 2 (lower is better) Translates to: LAVMGLGDQRLSNRTTANSELYS*TFLRVN Trigger: ATTTACCCTCAGGAAAGTCCAAGAATAAAGTTCTGA...GTTAGCTGTGGTTCTGTTACTTAATCTTTGATCACCCAAACCCATTACTGCCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215929.2 |
||
| 3UTR-3UTR GCA 90 bp | TTACAATGTTCAAAGAAACTGTATACTTGCTGTTTCCTTAGAAATAAGGGGCCAGGTTCAATTGAGAACTaGATCAGATGGTTACATGTG | + |
|
Preference number: 2 (lower is better) Translates to: LQCSKKLYTCCFLRNKGPGSIEN*IRWLHV Trigger: CACATGTAACCATCTGATGCAGTTCTCAATTGAACC...TGGCCCCTTATTTCTAAGGAAACAGCAAGTATACAGTTTCTTTGAACATTGTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215929.2 |
||
| 3UTR TCA 72 bp | AGATCCTGCTGTCAGGAGCCTGATATAGCTGTCTCCTaGGAGGCTCTGCCAGTGCCTGGCAAAACAGAAGTA | + |
|
Preference number: 3 (lower is better) Translates to: RSCCQEPDIAVS*EALPVPGKTEV Trigger: TACTTCTGTTTTGCCAGGCACTGGCAGAGCCTCTCAGGAGACAGCTATATCAGGCTCCTGACAGCAGGATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215929.2 |
||
| 3UTR TCA 72 bp | ATGGTAGATTCCAACAAGATCCTGCTGTCAGGAGCCTaGTATAGCTGTCTCCTGAGAGGCTCTGCCAGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: MVDSNKILLSGA*YSCLLRGSASA Trigger: GGCACTGGCAGAGCCTCTCAGGAGACAGCTATATCAGGCTCCTGACAGCAGGATCTTGTTGGAATCTACCAT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215929.2 |
||
| 3UTR TCA 72 bp | GGTAACTTCAGGGCAGGGTCCCAGCCAGTTAGCTCATaGCCTGTGCTTATCAGAGACAAGCAGATCTCTGAT | + |
|
Preference number: 3 (lower is better) Translates to: GNFRAGSQPVSS*PVLIRDKQISD Trigger: ATCAGAGATCTGCTTGTCTCTGATAAGCACAGGTCATGAGCTAACTGGCTGGGACCCTGCCCTGAAGTTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215929.2 |
||
| 3UTR TCA 72 bp | GGGTCTCCAGTGAAGGAGCTAAAGTACCCAAGGAGCTaGAGGGTTTTGCAACCCAATAGGAGGAACATCAAT | + |
|
Preference number: 3 (lower is better) Translates to: GSPVKELKYPRS*RVLQPNRRNIN Trigger: ATTGATGTTCCTCCTATTGGGTTGCAAAACCCTTCAGCTCCTTGGGTACTTTAGCTCCTTCACTGGAGACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215929.2 |
||
| 3UTR GCA 72 bp | CAAGGGAACTTAGGCTGGCAGCTTGGACCCACTACTTaGCTTCCAGTAGTTTCTTTTCACAGATCCCAAACA | + |
|
Preference number: 3 (lower is better) Translates to: QGNLGWQLGPTT*LPVVSFHRSQT Trigger: TGTTTGGGATCTGTGAAAAGAAACTACTGGAAGGCAAGTAGTGGGTCCAAGCTGCCAGCCTAAGTTCCCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215929.2 |
||
| 3UTR CCA 72 bp | AGCTATAGTTGCATATGTAGCAGAGCATGGCCTAGTTaGTCATCAATGGGAGGAGAGTTCCTAGGTCCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: SYSCICSRAWPS*SSMGGEFLGPV Trigger: CACAGGACCTAGGAACTCTCCTCCCATTGATGACCAACTAGGCCATGCTCTGCTACATATGCAACTATAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215929.2 |
||
| 3UTR CCA 72 bp | AACCCTTCTCTCAGGAACCTGTCTCCAAGACAAACCTaGTCCTTGGCAGTAATGGGTTTGGGTGATCAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: NPSLRNLSPRQT*SLAVMGLGDQR Trigger: TCTTTGATCACCCAAACCCATTACTGCCAAGGACCAGGTTTGTCTTGGAGACAGGTTCCTGAGAGAAGGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215929.2 |
||
| 3UTR CCA 72 bp | ACAGAGAGTATCCCAAGGGAACTTAGGCTGGCAGCTTaGACCCACTACTTGCCTTCCAGTAGTTTCTTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: TESIPRELRLAA*THYLPSSSFFS Trigger: TGAAAAGAAACTACTGGAAGGCAAGTAGTGGGTCCAAGCTGCCAGCCTAAGTTCCCTTGGGATACTCTCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215929.2 |
||
| 3UTR GCA 72 bp | TCAGGGCAGGGTCCCAGCCAGTTAGCTCATGACCTGTaGTTATCAGAGACAAGCAGATCTCTGATATTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: SGQGPSQLAHDL*LSETSRSLIFL Trigger: TAAAAATATCAGAGATCTGCTTGTCTCTGATAAGCACAGGTCATGAGCTAACTGGCTGGGACCCTGCCCTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215929.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGCACAGGGTCTCCAGTGAAGGAGCTAAAGTACCCAAGGAGCTGAAGGGTTTTAAGTTGTGTGCAGTTTaGAAGATTAAAACCAGCATC | + |
|
Preference number: 3 (lower is better) Translates to: EHRVSSEGAKVPKELKGFKLCAV*KIKTSI Trigger: GATGCTGGTTTTAATCTTCAAAACTGCACACAACTT...AAAACCCTTCAGCTCCTTGGGTACTTTAGCTCCTTCACTGGAGACCCTGTGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215929.2 |
||
| 3UTR TCA 72 bp | CTGGACCTTGTTAGCTGTAATTGTGTGAAAATAATGTaGGCCAGGCAGTTGTGGATGGATCTGGAGGACATC | + |
|
Preference number: 3 (lower is better) Translates to: LDLVSCNCVKIM*ARQLWMDLEDI Trigger: GATGTCCTCCAGATCCATCCACAACTGCCTGGCTCACATTATTTTCACACAATTACAGCTAACAAGGTCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215929.2 |
||
| 3UTR GCA 72 bp | TCAAGAAAAACACATGGTGGGACTGGTAGCTATAGTTaGATATGTAGCAGAGCATGGCCTAGTTGGTCATCA | + |
|
Preference number: 3 (lower is better) Translates to: SRKTHGGTGSYS*ICSRAWPSWSS Trigger: TGATGACCAACTAGGCCATGCTCTGCTACATATGCAACTATAGCTACCAGTCCCACCATGTGTTTTTCTTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215929.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGGCAGTAATGGGTTTGGGTGATCAAAGATTAAGTAACAGAACCACAGCTAACTTGGCTATCAAGAACTaGTCTAAGCAAATAGTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: LAVMGLGDQRLSNRTTANLAIKN*SKQIVP Trigger: AGGAACTATTTGCTTAGACAAGTTCTTGATAGCCAA...GTTAGCTGTGGTTCTGTTACTTAATCTTTGATCACCCAAACCCATTACTGCCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215929.2 |
||
| 3UTR TCA 72 bp | AATCACTATAAAGGAGATAAGAGATTTAGGAAGAAGTaGTCACAGTCTCCCACACAGCTAAGATTCCTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: NHYKGDKRFRKK*SQSPTQLRFLS Trigger: ACTCAGGAATCTTAGCTGTGTGGGAGACTGTGATCACTTCTTCCTAAATCTCTTATCTCCTTTATAGTGATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215929.2 |
||
| 3UTR-3UTR CAA 90 bp | TTACAATGTTCAAAGAAACTGTATACTTGCTGTTTCCTTAGAAATAAGGGGCCACAAAATAGATACCAGTaGTTTAGGATTTCTGCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: LQCSKKLYTCCFLRNKGPQNRYQ*FRISAE Trigger: CTCTGCAGAAATCCTAAACAACTGGTATCTATTTTG...TGGCCCCTTATTTCTAAGGAAACAGCAAGTATACAGTTTCTTTGAACATTGTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215929.2 |
||
| CDS-3UTR CCA 90 bp | GAGCACAGGGTCTCCAGTGAAGGAGCTAAAGTACCCAAGGAGCTGAAGGGTTTTCTCCCTTCAGCACTGTaGTTTCGCAGAGAGTATAAG | + |
|
Preference number: 4 (lower is better) Translates to: EHRVSSEGAKVPKELKGFLPSAL*FRREYK Trigger: CTTATACTCTCTGCGAAACCACAGTGCTGAAGGGAG...AAAACCCTTCAGCTCCTTGGGTACTTTAGCTCCTTCACTGGAGACCCTGTGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215929.2 |
||
| 3UTR CAA 72 bp | CCAAGGGAACTTAGGCTGGCAGCTTGGACCCACTACTaGCCTTCCAGTAGTTTCTTTTCACAGATCCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: PRELRLAAWTHY*PSSSFFSQIPN Trigger: GTTTGGGATCTGTGAAAAGAAACTACTGGAAGGCAAGTAGTGGGTCCAAGCTGCCAGCCTAAGTTCCCTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215929.2 |
||
| CDS-3UTR TCA 90 bp | TTCCTGTCTTGTACAGTGGCAGTTATGGAGCATCTGCTGGATTGTATTGAATTGTGGGGCTGTGGACGTTaGAAAGCAGGAATCAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: FLSCTVAVMEHLLDCIELWGCGR*KAGISK Trigger: TTTGCTGATTCCTGCTTTTCAACGTCCACAGCCCCA...CAATTCAATACAATCCAGCAGATGCTCCATAACTGCCACTGTACAAGACAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215929.2 |
||
| CDS-3UTR TCA 90 bp | ACAGGAACAAGAGGAAGAATGAGGAGTGCCCTTTTGACACCCTGGTCCGTCATTACAACTACTATTATATaGGATGTGCAGGTAGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: TGTRGRMRSALLTPWSVITTTII*DVQVES Trigger: ACTCTCTACCTGCACATCTCATATAATAGTAGTTGT...AATGACGGACCAGGGTGTCAAAAGGGCACTCCTCATTCTTCCTCTTGTTCCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215929.2 |
||
| CDS-3UTR TCA 90 bp | TTCCTGTCTTGTACAGTGGCAGTTATGGAGCATCTGCTGGATTGTATTGAATTGGTGGACGTGCATATATaGATATGCAGGGTCCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FLSCTVAVMEHLLDCIELVDVHI*ICRVQR Trigger: CCTTTGGACCCTGCATATTCATATATGCACGTCCAC...CAATTCAATACAATCCAGCAGATGCTCCATAACTGCCACTGTACAAGACAGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215929.2 |
||
| CDS-3UTR CCA 90 bp | TTGGCAGTAATGGGTTTGGGTGATCAAAGATTAAGTAACAGAACCACAGCTAACACAGGAAGAAGTACATaGGACCCCCAAGTGTTCGAC | + |
|
Preference number: 4 (lower is better) Translates to: LAVMGLGDQRLSNRTTANTGRST*DPQVFD Trigger: GTCGAACACTTGGGGGTCCCATGTACTTCTTCCTGT...GTTAGCTGTGGTTCTGTTACTTAATCTTTGATCACCCAAACCCATTACTGCCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215929.2 |
||
| 3UTR CAA 72 bp | GCTATCAAGAACTTGTCTAAGCAAATAGTTCCTGTCTaGTACAGTGGCAGTTATGGAGCATCTGCTGGATTG | + |
|
Preference number: 4 (lower is better) Translates to: AIKNLSKQIVPV*YSGSYGASAGL Trigger: CAATCCAGCAGATGCTCCATAACTGCCACTGTACAAGACAGGAACTATTTGCTTAGACAAGTTCTTGATAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215929.2 |
||
| CDS-3UTR GCA 90 bp | TTGGCAGTAATGGGTTTGGGTGATCAAAGATTAAGTAACAGAACCACAGCTAACAGTAGTTGGTGGACGTaGATATATGAATATGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LAVMGLGDQRLSNRTTANSSWWT*IYEYAG Trigger: CCCTGCATATTCATATATGCACGTCCACCAACTACT...GTTAGCTGTGGTTCTGTTACTTAATCTTTGATCACCCAAACCCATTACTGCCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215929.2 |
||
| CDS-3UTR CCA 90 bp | TTGGCAGTAATGGGTTTGGGTGATCAAAGATTAAGTAACAGAACCACAGCTAACATGCAGCCAAATAAATaGAGAGCAAAGACTTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LAVMGLGDQRLSNRTTANMQPNK*RAKTCV Trigger: GACACAAGTCTTTGCTCTCCATTTATTTGGCTGCAT...GTTAGCTGTGGTTCTGTTACTTAATCTTTGATCACCCAAACCCATTACTGCCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215929.2 |
||
| CDS-3UTR CAA 90 bp | GAGCACAGGGTCTCCAGTGAAGGAGCTAAAGTACCCAAGGAGCTGAAGGGTTTTTTGGGGCTGTGGACGTaGAAAAGCAGGAATCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: EHRVSSEGAKVPKELKGFLGLWT*KSRNQQ Trigger: TTGCTGATTCCTGCTTTTCAACGTCCACAGCCCCAA...AAAACCCTTCAGCTCCTTGGGTACTTTAGCTCCTTCACTGGAGACCCTGTGCTC 51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000215929.2 |
||
| CDS-3UTR CAA 90 bp | CTGGTCCGTCATTGCCCCTGGTACATGATGAAGAGAAACCTGAAGACTTCATTGAGTGTTCGACTGAACTaGATTGTCACAATAATGAGT | + |
|
Preference number: 5 (lower is better) Translates to: LVRHCPWYMMKRNLKTSLSVRLN*IVTIMS Trigger: ACTCATTATTGTGACAATCAAGTTCAGTCGAACACT...CAATGAAGTCTTCAGGTTTCTCTTCATCATGTACCAGGGGCAATGACGGACCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215929.2 |
||
| CDS-3UTR CAA 90 bp | CTGGTAGCTATAGTTGCATATGTAGCAGAGCATGGCCTAGTTGGTCATCAATGGATGGAGAGCAAAGACTaGTGTCATGCATTCATTGTA | + |
|
Preference number: 5 (lower is better) Translates to: LVAIVAYVAEHGLVGHQWMESKD*CHAFIV Trigger: TACAATGAATGCATGACACAAGTCTTTGCTCTCCAT...CCATTGATGACCAACTAGGCCATGCTCTGCTACATATGCAACTATAGCTACCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215929.2 |
||
| CDS TCA 72 bp | GGCCCACAGAAGGGCAGTCTCAAGGCCAAAACAATCTaGGTAGTGGAATGTAGAAAAGACCCTATCCAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: GPQKGSLKAKTI*VVECRKDPIQA Trigger: TGCCTGGATAGGGTCTTTTCTACATTCCACTACTCAGATTGTTTTGGCCTTGAGACTGCCCTTCTGTGGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076438.2 ENSMUST00000215929.2 |
||
| CDS CAA 72 bp | AAGAAGTACATGGGACCCCCAAGTGTTCGACTGAACTaGATTGTCACAATAATGAGTGTATTCCCCACTACA | + |
|
Preference number: 6 (lower is better) Translates to: KKYMGPPSVRLN*IVTIMSVFPTT Trigger: TGTAGTGGGGAATACACTCATTATTGTGACAATCAAGTTCAGTCGAACACTTGGGGGTCCCATGTACTTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000076438.2 ENSMUST00000215929.2 |
||