Pregenerated sensors for OLFR1204 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000061798Ensembl transcript IDs: ENSMUST00000213283.2
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CATATTTATGTTCCTCCTATGGGACTGCAAACCCCTTCAGCTCCTTaGATACTTTCTCTAGCTCCTTCATTGGGGACCCTGTGCTCCGGC | + |
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Preference number: 1 (lower is better) Translates to: HIYVPPMGLQTPSAP*ILSLAPSLGTLCSG Trigger: GCCGGAGCACAGGGTCCCCAATGAAGGAGCTAGAGAAAGTATCCAAGGAGCTGAAGGGGTTTGCAGTCCCATAGGAGGAACATAAATATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213283.2 |
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| 3UTR GCA 90 bp | AAGAGAGAAATCACAGAAGATCTCAGAAGATGGAAAGATCTCCCATaGTTATGGCTTGACAGGATTAATATAGTCAAAATGGCCATCTTG | + |
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Preference number: 1 (lower is better) Translates to: KREITEDLRRWKDLP*LWLDRINIVKMAIL Trigger: CAAGATGGCCATTTTGACTATATTAATCCTGTCAAGCCATAAGCATGGGAGATCTTTCCATCTTCTGAGATCTTCTGTGATTTCTCTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213283.2 |
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| 3UTR CCA 90 bp | AATCATAGCTTTTCTACAAAACATGAAACAGAATCAATTTCGCTTTaGGTTAAACTTAAATCAGAGGCTGGCTGGCTGTCGGTCTGTCTT | + |
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Preference number: 1 (lower is better) Translates to: NHSFSTKHETESISL*VKLKSEAGWLSVCL Trigger: AAGACAGACCGACAGCCAGCCAGCCTCTGATTTAAGTTTAACCCAAAGCGAAATTGATTCTGTTTCATGTTTTGTAGAAAAGCTATGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213283.2 |
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| 3UTR CCA 90 bp | GAAATCACAGAAGATCTCAGAAGATGGAAAGATCTCCCATGCTTATaGCTTGACAGGATTAATATAGTCAAAATGGCCATCTTGCCAAAA | + |
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Preference number: 1 (lower is better) Translates to: EITEDLRRWKDLPCL*LDRINIVKMAILPK Trigger: TTTTGGCAAGATGGCCATTTTGACTATATTAATCCTGTCAAGCCATAAGCATGGGAGATCTTTCCATCTTCTGAGATCTTCTGTGATTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213283.2 |
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| 3UTR TCA 90 bp | CATTACAAATTATGTTACCTTTTTACAGATTCATCATGGATAGTCTaGGATCCAACTCCACTCCGGACAGTTTACAAAGGTTGTGTCTTT | + |
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Preference number: 1 (lower is better) Translates to: HYKLCYLFTDSSWIV*DPTPLRTVYKGCVF Trigger: AAAGACACAACCTTTGTAAACTGTCCGGAGTGGAGTTGGATCTCAGACTATCCATGATGAATCTGTAAAAAGGTAACATAATTTGTAATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213283.2 |
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| 3UTR CAA 90 bp | TCATATTTATGTTCCTCCTATGGGACTGCAAACCCCTTCAGCTCCTaGGATACTTTCTCTAGCTCCTTCATTGGGGACCCTGTGCTCCGG | + |
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Preference number: 2 (lower is better) Translates to: SYLCSSYGTANPFSS*DTFSSSFIGDPVLR Trigger: CCGGAGCACAGGGTCCCCAATGAAGGAGCTAGAGAAAGTATCCAAGGAGCTGAAGGGGTTTGCAGTCCCATAGGAGGAACATAAATATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213283.2 |
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| 3UTR-3UTR TCA 90 bp | TTGGATACTTTCTCTAGCTCCTTCATTGGGGACCCTGTGCTCCGGCCAATGGATTGTGTGACAGCAACATaGCCAAAAGTGTGTCCACAG | + |
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Preference number: 2 (lower is better) Translates to: LDTFSSSFIGDPVLRPMDCVTAT*PKVCPQ Trigger: CTGTGGACACACTTTTGGTCATGTTGCTGTCACACA...ATCCATTGGCCGGAGCACAGGGTCCCCAATGAAGGAGCTAGAGAAAGTATCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213283.2 |
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| 3UTR-3UTR TCA 90 bp | TTGGATACTTTCTCTAGCTCCTTCATTGGGGACCCTGTGCTCCGGCCAATGGATTTTCTCCAGTCAATCTaGAGACACATGACTGTTCCT | + |
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Preference number: 2 (lower is better) Translates to: LDTFSSSFIGDPVLRPMDFLQSI*RHMTVP Trigger: AGGAACAGTCATGTGTCTTCAGATTGACTGGAGAAA...ATCCATTGGCCGGAGCACAGGGTCCCCAATGAAGGAGCTAGAGAAAGTATCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213283.2 |
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| 3UTR-3UTR TCA 90 bp | TTGGATACTTTCTCTAGCTCCTTCATTGGGGACCCTGTGCTCCGGCCAATGGATAGAACTTCAAGTCTCTaGAGAGAGAAATCACAGAAG | + |
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Preference number: 2 (lower is better) Translates to: LDTFSSSFIGDPVLRPMDRTSSL*REKSQK Trigger: CTTCTGTGATTTCTCTCTTCAGAGACTTGAAGTTCT...ATCCATTGGCCGGAGCACAGGGTCCCCAATGAAGGAGCTAGAGAAAGTATCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213283.2 |
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| 3UTR-3UTR TCA 90 bp | TTGGATACTTTCTCTAGCTCCTTCATTGGGGACCCTGTGCTCCGGCCAATGGATGTTGAAAGAGAGAGTTaGCACAAGAGAATTATCCTA | + |
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Preference number: 2 (lower is better) Translates to: LDTFSSSFIGDPVLRPMDVERES*HKRIIL Trigger: TAGGATAATTCTCTTGTGTCAACTCTCTCTTTCAAC...ATCCATTGGCCGGAGCACAGGGTCCCCAATGAAGGAGCTAGAGAAAGTATCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213283.2 |
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| 3UTR-3UTR TCA 90 bp | CCTGACCTCAAGCTGTACTACAGAGCAATTGTGATAAAAACTGCATGGTACTGCGCAATAGAATGCATGTaGGTGGGGTGCAAGGGAAAA | + |
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Preference number: 2 (lower is better) Translates to: PDLKLYYRAIVIKTAWYCAIECM*VGCKGK Trigger: TTTTCCCTTGCACCCCACTCACATGCATTCTATTGC...GCAGTACCATGCAGTTTTTATCACAATTGCTCTGTAGTACAGCTTGAGGTCAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213283.2 |
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| 3UTR-3UTR TCA 90 bp | TTGGATACTTTCTCTAGCTCCTTCATTGGGGACCCTGTGCTCCGGCCAATGGATGAATATAACCATATTTaGTTGAGGTTCCCAGGTAAG | + |
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Preference number: 2 (lower is better) Translates to: LDTFSSSFIGDPVLRPMDEYNHI*LRFPGK Trigger: CTTACCTGGGAACCTCAATCAAATATGGTTATATTC...ATCCATTGGCCGGAGCACAGGGTCCCCAATGAAGGAGCTAGAGAAAGTATCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213283.2 |
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| 3UTR-3UTR CCA 90 bp | TTGGATACTTTCTCTAGCTCCTTCATTGGGGACCCTGTGCTCCGGCCAATGGATGTGATAAAAACTGCATaGTACTGCTACAGTGAAAGA | + |
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Preference number: 2 (lower is better) Translates to: LDTFSSSFIGDPVLRPMDVIKTA*YCYSER Trigger: TCTTTCACTGTAGCAGTACCATGCAGTTTTTATCAC...ATCCATTGGCCGGAGCACAGGGTCCCCAATGAAGGAGCTAGAGAAAGTATCCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213283.2 |
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| 3UTR-3UTR CCA 90 bp | TTGGATACTTTCTCTAGCTCCTTCATTGGGGACCCTGTGCTCCGGCCAATGGATGAAAAGAAATGTGCTTaGTCGAACTTTAATAGTCCT | + |
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Preference number: 2 (lower is better) Translates to: LDTFSSSFIGDPVLRPMDEKKCA*SNFNSP Trigger: AGGACTATTAAAGTTCGACCAAGCACATTTCTTTTC...ATCCATTGGCCGGAGCACAGGGTCCCCAATGAAGGAGCTAGAGAAAGTATCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213283.2 |
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| 3UTR-3UTR GCA 90 bp | TCATATTTATGTTCCTCCTATGGGACTGCAAACCCCTTCAGCTCCTTGGATACTTGGGGGTCTCATTTCTaGTTTCCTTCACGTAATACA | + |
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Preference number: 2 (lower is better) Translates to: SYLCSSYGTANPFSSLDTWGSHF*FPSRNT Trigger: TGTATTACGTGAAGGAAAGCAGAAATGAGACCCCCA...AGTATCCAAGGAGCTGAAGGGGTTTGCAGTCCCATAGGAGGAACATAAATATGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213283.2 |
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| 3UTR-3UTR GCA 90 bp | TCATATTTATGTTCCTCCTATGGGACTGCAAACCCCTTCAGCTCCTTGGATACTTGGAAAGATCTCCCATaGTTATGGCTTGACAGGATT | + |
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Preference number: 2 (lower is better) Translates to: SYLCSSYGTANPFSSLDTWKDLP*LWLDRI Trigger: AATCCTGTCAAGCCATAAGCATGGGAGATCTTTCCA...AGTATCCAAGGAGCTGAAGGGGTTTGCAGTCCCATAGGAGGAACATAAATATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213283.2 |
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| 3UTR-3UTR TCA 90 bp | CCTGACCTCAAGCTGTACTACAGAGCAATTGTGATAAAAACTGCATGGTACTGCCTGTCTGTCTCTTTCTaGGTGTGTTTGTATATGATG | + |
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Preference number: 2 (lower is better) Translates to: PDLKLYYRAIVIKTAWYCLSVSF*VCLYMM Trigger: CATCATATACAAACACACTCAGAAAGAGACAGACAG...GCAGTACCATGCAGTTTTTATCACAATTGCTCTGTAGTACAGCTTGAGGTCAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213283.2 |
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| 3UTR-3UTR TCA 90 bp | TACTACAGAGCAATTGTGATAAAAACTGCATGGTACTGCTACAGTGAAAGACAGTTACTCCCACCACTGTaGTCAGTTTCTAGACCTGGA | + |
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Preference number: 2 (lower is better) Translates to: YYRAIVIKTAWYCYSERQLLPPL*SVSRPG Trigger: TCCAGGTCTAGAAACTGATCACAGTGGTGGGAGTAA...CTGTCTTTCACTGTAGCAGTACCATGCAGTTTTTATCACAATTGCTCTGTAGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213283.2 |
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| 3UTR-3UTR TCA 90 bp | TACTACAGAGCAATTGTGATAAAAACTGCATGGTACTGCTACAGTGAAAGACAGGGGGTCTGGGGAATGTaGTTTCCTAATGTGTTCTCT | + |
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Preference number: 2 (lower is better) Translates to: YYRAIVIKTAWYCYSERQGVWGM*FPNVFS Trigger: AGAGAACACATTAGGAAATCACATTCCCCAGACCCC...CTGTCTTTCACTGTAGCAGTACCATGCAGTTTTTATCACAATTGCTCTGTAGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000213283.2 |
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| 3UTR-3UTR GCA 90 bp | TTTTACAGATTCATCATGGATAGTCTGAGATCCAACTCCACTCCGGACAGTTTAATGACATGTTTAAAGTaGCCATGGAGGCCACAGGAT | + |
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Preference number: 2 (lower is better) Translates to: FYRFIMDSLRSNSTPDSLMTCLK*PWRPQD Trigger: ATCCTGTGGCCTCCATGGGCACTTTAAACATGTCAT...TAAACTGTCCGGAGTGGAGTTGGATCTCAGACTATCCATGATGAATCTGTAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213283.2 |
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| 3UTR-3UTR TCA 90 bp | TCATATTTATGTTCCTCCTATGGGACTGCAAACCCCTTCAGCTCCTTGGATACTCTGGTAATTAGTTTTTaGTCTCTGGAGCTACACAAA | + |
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Preference number: 2 (lower is better) Translates to: SYLCSSYGTANPFSSLDTLVISF*SLELHK Trigger: TTTGTGTAGCTCCAGAGATCAAAAACTAATTACCAG...AGTATCCAAGGAGCTGAAGGGGTTTGCAGTCCCATAGGAGGAACATAAATATGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213283.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGACCTCAAGCTGTACTACAGAGCAATTGTGATAAAAACTGCATGGTACTGCATATGTCTCTCTATATaGAGCAGACCACTTTCCATT | + |
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Preference number: 2 (lower is better) Translates to: PDLKLYYRAIVIKTAWYCICLSI*SRPLSI Trigger: AATGGAAAGTGGTCTGCTCCATATAGAGAGACATAT...GCAGTACCATGCAGTTTTTATCACAATTGCTCTGTAGTACAGCTTGAGGTCAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213283.2 |
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| 3UTR-3UTR CCA 90 bp | TACTACAGAGCAATTGTGATAAAAACTGCATGGTACTGCTACAGTGAAAGACAGTGTTTAAAGTGCCCATaGAGGCCACAGGATGCATTA | + |
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Preference number: 2 (lower is better) Translates to: YYRAIVIKTAWYCYSERQCLKCP*RPQDAL Trigger: TAATGCATCCTGTGGCCTCCATGGGCACTTTAAACA...CTGTCTTTCACTGTAGCAGTACCATGCAGTTTTTATCACAATTGCTCTGTAGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213283.2 |
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| 3UTR-3UTR CCA 90 bp | TCATATTTATGTTCCTCCTATGGGACTGCAAACCCCTTCAGCTCCTTGGATACTAGACAGGTAGAACAATaGAACATAACTGAAGACTCA | + |
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Preference number: 2 (lower is better) Translates to: SYLCSSYGTANPFSSLDTRQVEQ*NITEDS Trigger: TGAGTCTTCAGTTATGTTCCATTGTTCTACCTGTCT...AGTATCCAAGGAGCTGAAGGGGTTTGCAGTCCCATAGGAGGAACATAAATATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213283.2 |
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| 3UTR-3UTR CCA 90 bp | TCATATTTATGTTCCTCCTATGGGACTGCAAACCCCTTCAGCTCCTTGGATACTACTCAAACAAATGACTaGCCTTTCTTTACACAAAGG | + |
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Preference number: 2 (lower is better) Translates to: SYLCSSYGTANPFSSLDTTQTND*PFFTQR Trigger: CCTTTGTGTAAAGAAAGGCCAGTCATTTGTTTGAGT...AGTATCCAAGGAGCTGAAGGGGTTTGCAGTCCCATAGGAGGAACATAAATATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213283.2 |
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| 3UTR-3UTR GCA 90 bp | TTTTACAGATTCATCATGGATAGTCTGAGATCCAACTCCACTCCGGACAGTTTAAAAGGTTGTGTCTTTTaGTTTCCCAGGAGGAGTATT | + |
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Preference number: 2 (lower is better) Translates to: FYRFIMDSLRSNSTPDSLKGCVF*FPRRSI Trigger: AATACTCCTCCTGGGAAAGCAAAAGACACAACCTTT...TAAACTGTCCGGAGTGGAGTTGGATCTCAGACTATCCATGATGAATCTGTAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213283.2 |
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| 3UTR-3UTR TCA 90 bp | TTTTACAGATTCATCATGGATAGTCTGAGATCCAACTCCACTCCGGACAGTTTATTAAAGTGTGACCTATaGGCAGGTTTAGTACTTTAC | + |
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Preference number: 2 (lower is better) Translates to: FYRFIMDSLRSNSTPDSLLKCDL*AGLVLY Trigger: GTAAAGTACTAAACCTGCTCATAGGTCACACTTTAA...TAAACTGTCCGGAGTGGAGTTGGATCTCAGACTATCCATGATGAATCTGTAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213283.2 |
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| 3UTR-3UTR TCA 90 bp | TACTACAGAGCAATTGTGATAAAAACTGCATGGTACTGCTACAGTGAAAGACAGGTCTATTTTAAAGTGTaGCCTATGAGCAGGTTTAGT | + |
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Preference number: 2 (lower is better) Translates to: YYRAIVIKTAWYCYSERQVYFKV*PMSRFS Trigger: ACTAAACCTGCTCATAGGTCACACTTTAAAATAGAC...CTGTCTTTCACTGTAGCAGTACCATGCAGTTTTTATCACAATTGCTCTGTAGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213283.2 |
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| 3UTR-3UTR TCA 90 bp | TACTACAGAGCAATTGTGATAAAAACTGCATGGTACTGCTACAGTGAAAGACAGTTACCCTACTTTTTCTaGGGAAACTGTAATGGTCTT | + |
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Preference number: 2 (lower is better) Translates to: YYRAIVIKTAWYCYSERQLPYFF*GNCNGL Trigger: AAGACCATTACAGTTTCCTCAGAAAAAGTAGGGTAA...CTGTCTTTCACTGTAGCAGTACCATGCAGTTTTTATCACAATTGCTCTGTAGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000213283.2 |
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| 3UTR CCA 72 bp | CCCACTCCCACTCCTGGCCCTGGTATTCCCCTATACTaGTGTATAGAACTTTCACAGGACCAAGGGCCTCTT | + |
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Preference number: 3 (lower is better) Translates to: PTPTPGPGIPLY*CIELSQDQGPL Trigger: AAGAGGCCCTTGGTCCTGTGAAAGTTCTATACACCAGTATAGGGGAATACCAGGGCCAGGAGTGGGAGTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213283.2 |
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| 3UTR CCA 72 bp | GTTCCTCCTATGGGACTGCAAACCCCTTCAGCTCCTTaGATACTTTCTCTAGCTCCTTCATTGGGGACCCTG | + |
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Preference number: 3 (lower is better) Translates to: VPPMGLQTPSAP*ILSLAPSLGTL Trigger: CAGGGTCCCCAATGAAGGAGCTAGAGAAAGTATCCAAGGAGCTGAAGGGGTTTGCAGTCCCATAGGAGGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213283.2 |
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| 3UTR CCA 72 bp | GGAGAAAAGTATATAGTGATGCCCAGCCCTCACAATTaGGGTCCTACACTTTCAGAGGAGAGGAAGGGTGAT | + |
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Preference number: 3 (lower is better) Translates to: GEKYIVMPSPHN*GPTLSEERKGD Trigger: ATCACCCTTCCTCTCCTCTGAAAGTGTAGGACCCCAATTGTGAGGGCTGGGCATCACTATATACTTTTCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213283.2 |
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| 3UTR CCA 72 bp | GAACCACAAGTCCTACCATGTGTTTCCTTTGATTGTTaGTTTAGTCCCAAGGGGCTCTGGGAGTACTGGTTA | + |
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Preference number: 3 (lower is better) Translates to: EPQVLPCVSFDC*FSPKGLWEYWL Trigger: TAACCAGTACTCCCAGAGCCCCTTGGGACTAAACCAACAATCAAAGGAAACACATGGTAGGACTTGTGGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213283.2 |
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| 3UTR-3UTR CAA 90 bp | TCATATTTATGTTCCTCCTATGGGACTGCAAACCCCTTCAGCTCCTTGGATACTACTTTCCATTGTGACTaGTGCTGTCAGCTCAGAAGG | + |
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Preference number: 3 (lower is better) Translates to: SYLCSSYGTANPFSSLDTTFHCD*CCQLRR Trigger: CCTTCTGAGCTGACAGCACAAGTCACAATGGAAAGT...AGTATCCAAGGAGCTGAAGGGGTTTGCAGTCCCATAGGAGGAACATAAATATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213283.2 |
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| 3UTR CCA 72 bp | GATTGTTGGTTTAGTCCCAAGGGGCTCTGGGAGTACTaGTTAGTTCATATTTATGTTCCTCCTATGGGACTG | + |
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Preference number: 3 (lower is better) Translates to: DCWFSPKGLWEY*LVHIYVPPMGL Trigger: CAGTCCCATAGGAGGAACATAAATATGAACTAACCAGTACTCCCAGAGCCCCTTGGGACTAAACCAACAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213283.2 |
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| 3UTR-3UTR CAA 90 bp | TCGCTTTGGGTTAAACTTAAATCAGAGGCTGGCTGGCTGTCGGTCTGTCTTACTCTGATATCATCCAAATaGTCCATCCCATTCTTTCTC | + |
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Preference number: 3 (lower is better) Translates to: SLWVKLKSEAGWLSVCLTLISSK*SIPFFL Trigger: GAGAAAGAATGGGATGGACAATTTGGATGATATCAG...AGTAAGACAGACCGACAGCCAGCCAGCCTCTGATTTAAGTTTAACCCAAAGCGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213283.2 |
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| 3UTR TCA 72 bp | GTGCTGTCAGCTCAGAAGGATTTACCCTACTTTTTCTaGGGAAACTGTAATGGTCTTTGGTCAGTGCATGCT | + |
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Preference number: 3 (lower is better) Translates to: VLSAQKDLPYFF*GNCNGLWSVHA Trigger: AGCATGCACTGACCAAAGACCATTACAGTTTCCTCAGAAAAAGTAGGGTAAATCCTTCTGAGCTGACAGCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213283.2 |
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| 3UTR TCA 72 bp | TATGTCTCTCTATATGGAGCAGACCACTTTCCATTGTaGCTTGTGCTGTCAGCTCAGAAGGATTTACCCTAC | + |
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Preference number: 3 (lower is better) Translates to: YVSLYGADHFPL*LVLSAQKDLPY Trigger: GTAGGGTAAATCCTTCTGAGCTGACAGCACAAGTCACAATGGAAAGTGGTCTGCTCCATATAGAGAGACATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213283.2 |
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| 3UTR GCA 72 bp | TGGATACTTTCTCTAGCTCCTTCATTGGGGACCCTGTaGTCCGGCCAATGGATGATAATGATCATTTCATTA | + |
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Preference number: 3 (lower is better) Translates to: WILSLAPSLGTL*SGQWMIMIISL Trigger: TAATGAAATGATCATTATCATCCATTGGCCGGAGCACAGGGTCCCCAATGAAGGAGCTAGAGAAAGTATCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213283.2 |
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| 3UTR CCA 72 bp | AATATACAGCAAACCAGTAGCCAACATAAGACTCAATaGCAAGAAACTCGAAGCAATCCCCCGAAAAGCAGG | + |
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Preference number: 3 (lower is better) Translates to: NIQQTSSQHKTQ*QETRSNPPKSR Trigger: CCTGCTTTTCGGGGGATTGCTTCGAGTTTCTTGCCATTGAGTCTTATGTTGGCTACTGGTTTGCTGTATATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213283.2 |
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| 3UTR GCA 72 bp | TATGACATGTTTAAAGTGCCCATGGAGGCCACAGGATaGATTATAATCTCTGGATCTGGGGTTACTGATTGT | + |
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Preference number: 3 (lower is better) Translates to: YDMFKVPMEATG*IIISGSGVTDC Trigger: ACAATCAGTAACCCCAGATCCAGAGATTATAATGCATCCTGTGGCCTCCATGGGCACTTTAAACATGTCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213283.2 |
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| 3UTR GCA 72 bp | ACTCCACTCCGGACAGTTTACAAAGGTTGTGTCTTTTaGTTTCCCAGGAGGAGTATTAGCACTAATGATGTA | + |
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Preference number: 3 (lower is better) Translates to: TPLRTVYKGCVF*FPRRSISTNDV Trigger: TACATCATTAGTGCTAATACTCCTCCTGGGAAAGCAAAAGACACAACCTTTGTAAACTGTCCGGAGTGGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213283.2 |
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| 3UTR CCA 72 bp | GTTTCCTTTGATTGTTGGTTTAGTCCCAAGGGGCTCTaGGAGTACTGGTTAGTTCATATTTATGTTCCTCCT | + |
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Preference number: 3 (lower is better) Translates to: VSFDCWFSPKGL*EYWLVHIYVPP Trigger: AGGAGGAACATAAATATGAACTAACCAGTACTCCCAGAGCCCCTTGGGACTAAACCAACAATCAAAGGAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213283.2 |
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| 3UTR-3UTR CAA 90 bp | CCTGACCTCAAGCTGTACTACAGAGCAATTGTGATAAAAACTGCATGGTACTGCGTTAAGATTATGAAGTaGGAAAGGGTCAATTGTCAG | + |
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Preference number: 3 (lower is better) Translates to: PDLKLYYRAIVIKTAWYCVKIMK*ERVNCQ Trigger: CTGACAATTGACCCTTTCCAACTTCATAATCTTAAC...GCAGTACCATGCAGTTTTTATCACAATTGCTCTGTAGTACAGCTTGAGGTCAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213283.2 |
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| 3UTR-3UTR CAA 90 bp | TACTACAGAGCAATTGTGATAAAAACTGCATGGTACTGCTACAGTGAAAGACAGGACAGTTTACAAAGGTaGTGTCTTTTGCTTTCCCAG | + |
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Preference number: 3 (lower is better) Translates to: YYRAIVIKTAWYCYSERQDSLQR*CLLLSQ Trigger: CTGGGAAAGCAAAAGACACAACCTTTGTAAACTGTC...CTGTCTTTCACTGTAGCAGTACCATGCAGTTTTTATCACAATTGCTCTGTAGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213283.2 |
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| 3UTR CCA 72 bp | GAAGATCTCAGAAGATGGAAAGATCTCCCATGCTTATaGCTTGACAGGATTAATATAGTCAAAATGGCCATC | + |
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Preference number: 3 (lower is better) Translates to: EDLRRWKDLPCL*LDRINIVKMAI Trigger: GATGGCCATTTTGACTATATTAATCCTGTCAAGCCATAAGCATGGGAGATCTTTCCATCTTCTGAGATCTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213283.2 |
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| 3UTR TCA 72 bp | GGAAGTAGATTCATGTCTATTTTAAAGTGTGACCTATaGGCAGGTTTAGTACTTTACACAGGGCTGCATGAT | + |
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Preference number: 3 (lower is better) Translates to: GSRFMSILKCDL*AGLVLYTGLHD Trigger: ATCATGCAGCCCTGTGTAAAGTACTAAACCTGCTCATAGGTCACACTTTAAAATAGACATGAATCTACTTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213283.2 |
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| 3UTR GCA 72 bp | TACTACAGAGCAATTGTGATAAAAACTGCATGGTACTaGTACAGTGAAAGACAGGTAGAACAATGGAACATA | + |
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Preference number: 3 (lower is better) Translates to: YYRAIVIKTAWY*YSERQVEQWNI Trigger: TATGTTCCATTGTTCTACCTGTCTTTCACTGTAGCAGTACCATGCAGTTTTTATCACAATTGCTCTGTAGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213283.2 |
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| 3UTR GCA 72 bp | ATCACAGAAGATCTCAGAAGATGGAAAGATCTCCCATaGTTATGGCTTGACAGGATTAATATAGTCAAAATG | + |
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Preference number: 3 (lower is better) Translates to: ITEDLRRWKDLP*LWLDRINIVKM Trigger: CATTTTGACTATATTAATCCTGTCAAGCCATAAGCATGGGAGATCTTTCCATCTTCTGAGATCTTCTGTGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213283.2 |
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| 3UTR CCA 72 bp | GCATGGTACTGCTACAGTGAAAGACAGGTAGAACAATaGAACATAACTGAAGACTCAACATATTTATTTTTA | + |
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Preference number: 3 (lower is better) Translates to: AWYCYSERQVEQ*NITEDSTYLFL Trigger: TAAAAATAAATATGTTGAGTCTTCAGTTATGTTCCATTGTTCTACCTGTCTTTCACTGTAGCAGTACCATGC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213283.2 |
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| CDS-3UTR CCA 90 bp | TTGGATACTTTCTCTAGCTCCTTCATTGGGGACCCTGTGCTCCGGCCAATGGATAAAAGCCCCAGGATGTaGGTGTCAATACAGGCTAGA | + |
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Preference number: 4 (lower is better) Translates to: LDTFSSSFIGDPVLRPMDKSPRM*VSIQAR Trigger: TCTAGCCTGTATTGACACCCACATCCTGGGGCTTTT...ATCCATTGGCCGGAGCACAGGGTCCCCAATGAAGGAGCTAGAGAAAGTATCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213283.2 |
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| CDS-3UTR TCA 90 bp | TCATATTTATGTTCCTCCTATGGGACTGCAAACCCCTTCAGCTCCTTGGATACTACTGCGGATTCTGTGTaGGCCCCAGGAGAACAAACT | + |
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Preference number: 4 (lower is better) Translates to: SYLCSSYGTANPFSSLDTTADSV*APGEQT Trigger: AGTTTGTTCTCCTGGGGCTCACACAGAATCCGCAGT...AGTATCCAAGGAGCTGAAGGGGTTTGCAGTCCCATAGGAGGAACATAAATATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213283.2 |
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| CDS-3UTR TCA 90 bp | TTGGATACTTTCTCTAGCTCCTTCATTGGGGACCCTGTGCTCCGGCCAATGGATATTTGTATACCTCCATaGAGAAAGCCTCCAACCCAT | + |
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Preference number: 4 (lower is better) Translates to: LDTFSSSFIGDPVLRPMDICIPP*RKPPTH Trigger: ATGGGTTGGAGGCTTTCTTCATGGAGGTATACAAAT...ATCCATTGGCCGGAGCACAGGGTCCCCAATGAAGGAGCTAGAGAAAGTATCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213283.2 |
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| CDS-3UTR CCA 90 bp | TCATATTTATGTTCCTCCTATGGGACTGCAAACCCCTTCAGCTCCTTGGATACTCTGCCTTCTGCACTGTaGGTCCTTAGGGAGTTAAGG | + |
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Preference number: 4 (lower is better) Translates to: SYLCSSYGTANPFSSLDTLPSAL*VLRELR Trigger: CCTTAACTCCCTAAGGACCCACAGTGCAGAAGGCAG...AGTATCCAAGGAGCTGAAGGGGTTTGCAGTCCCATAGGAGGAACATAAATATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213283.2 |
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| 3UTR CAA 72 bp | TCTCTCTATATGGAGCAGACCACTTTCCATTGTGACTaGTGCTGTCAGCTCAGAAGGATTTACCCTACTTTT | + |
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Preference number: 4 (lower is better) Translates to: SLYMEQTTFHCD*CCQLRRIYPTF Trigger: AAAAGTAGGGTAAATCCTTCTGAGCTGACAGCACAAGTCACAATGGAAAGTGGTCTGCTCCATATAGAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213283.2 |
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| CDS-3UTR GCA 90 bp | TACTACAGAGCAATTGTGATAAAAACTGCATGGTACTGCTACAGTGAAAGACAGACAAACAAGATTTTCTaGAACTGCGGATTCTGTGTG | + |
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Preference number: 4 (lower is better) Translates to: YYRAIVIKTAWYCYSERQTNKIF*NCGFCV Trigger: CACACAGAATCCGCAGTTGCAGAAAATCTTGTTTGT...CTGTCTTTCACTGTAGCAGTACCATGCAGTTTTTATCACAATTGCTCTGTAGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213283.2 |
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| CDS-3UTR TCA 90 bp | TACTACAGAGCAATTGTGATAAAAACTGCATGGTACTGCTACAGTGAAAGACAGCTTCAGTTCCTCCAATaGAATGTTCTGCAAAAACTT | + |
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Preference number: 4 (lower is better) Translates to: YYRAIVIKTAWYCYSERQLQFLQ*NVLQKL Trigger: AAGTTTTTGCAGAACATTTCATTGGAGGAACTGAAG...CTGTCTTTCACTGTAGCAGTACCATGCAGTTTTTATCACAATTGCTCTGTAGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000213283.2 |
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