Pregenerated sensors for OLFR1200 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075115Ensembl transcript IDs: ENSMUST00000099811.2, ENSMUST00000217588.3
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTCCATTCCCAATTTCTACATGATTCTAGGAGAGGAATGCCTCAGTaGGGGAATTATGTGCAGAATAAATTCAGGAATTCTGACTTAAGT | + |
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Preference number: 1 (lower is better) Translates to: LHSQFLHDSRRGMPQ*GNYVQNKFRNSDLS Trigger: ACTTAAGTCAGAATTCCTGAATTTATTCTGCACATAATTCCCTCACTGAGGCATTCCTCTCCTAGAATCATGTAGAAATTGGGAATGGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217588.3 |
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| 3UTR CCA 90 bp | GCATGGGAGAAAGCGTTCCTTATCAATTTTGCTGATTCCCATAATTaGGTGTTATCTTTACAAAAAGAAGGTGAGGAATCTGAGGTAGAT | + |
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Preference number: 1 (lower is better) Translates to: AWEKAFLINFADSHN*VLSLQKEGEESEVD Trigger: ATCTACCTCAGATTCCTCACCTTCTTTTTGTAAAGATAACACCCAATTATGGGAATCAGCAAAATTGATAAGGAACGCTTTCTCCCATGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217588.3 |
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| 3UTR TCA 90 bp | ATATATATAAGGCACAGACTTTCAACTATAGTAACCAGAATAAGCTaGGCAAATGAAATAAAGGAAAACGTCACTGGATCTGGGAAAGAC | + |
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Preference number: 1 (lower is better) Translates to: IYIRHRLSTIVTRIS*ANEIKENVTGSGKD Trigger: GTCTTTCCCAGATCCAGTGACGTTTTCCTTTATTTCATTTGCTCAGCTTATTCTGGTTACTATAGTTGAAAGTCTGTGCCTTATATATAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217588.3 |
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| 3UTR-3UTR TCA 90 bp | ACTCTTGGGTCTAAGGGTGTTGGATGCCCCAATGTAGGAGAATGCCAGGGTGGGTTACCTAACTCAGGATaGTATTTTCTAGTTCCATCC | + |
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Preference number: 2 (lower is better) Translates to: TLGSKGVGCPNVGECQGGLPNSG*YFLVPS Trigger: GGATGGAACTAGAAAATATCATCCTGAGTTAGGTAA...CCCACCCTGGCATTCTCCTACATTGGGGCATCCAACACCCTTAGACCCAAGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217588.3 |
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| 3UTR-3UTR CCA 90 bp | ACTCTTGGGTCTAAGGGTGTTGGATGCCCCAATGTAGGAGAATGCCAGGGTGGGAAACGTCACTGGATCTaGGAAAGACTTTGTTTTACA | + |
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Preference number: 2 (lower is better) Translates to: TLGSKGVGCPNVGECQGGKRHWI*ERLCFT Trigger: TGTAAAACAAAGTCTTTCCCAGATCCAGTGACGTTT...CCCACCCTGGCATTCTCCTACATTGGGGCATCCAACACCCTTAGACCCAAGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217588.3 |
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| 3UTR-3UTR TCA 90 bp | TCAAGAGTAGGTGGAAGAGTCAGAGACTCCCTAACTCCCACTATTAAGAGTCACCATCTCTGTGTGTGTTaGGGTAGTTGGGAAAGGAAC | + |
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Preference number: 2 (lower is better) Translates to: SRVGGRVRDSLTPTIKSHHLCVC*GSWERN Trigger: GTTCCTTTCCCAACTACCTCAACACACACAGAGATG...GTGACTCTTAATAGTGGGAGTTAGGGAGTCTCTGACTCTTCCACCTACTCTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217588.3 |
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| 3UTR-3UTR CCA 90 bp | ACTCTTGGGTCTAAGGGTGTTGGATGCCCCAATGTAGGAGAATGCCAGGGTGGGCTACTAGAGCACAGATaGGAATATTTAAAAAGGCAA | + |
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Preference number: 2 (lower is better) Translates to: TLGSKGVGCPNVGECQGGLLEHR*EYLKRQ Trigger: TTGCCTTTTTAAATATTCCCATCTGTGCTCTAGTAG...CCCACCCTGGCATTCTCCTACATTGGGGCATCCAACACCCTTAGACCCAAGAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217588.3 |
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| 3UTR-3UTR CCA 90 bp | TCTTCTGTCATGGGACATCTAGGTTGTTTCCAGCTTCTGGATGCTATGAAAGGGGGTTTCAAGAGTAGGTaGAAGAGTCAGAGACTCCCT | + |
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Preference number: 2 (lower is better) Translates to: SSVMGHLGCFQLLDAMKGGFKSR*KSQRLP Trigger: AGGGAGTCTCTGACTCTTCCACCTACTCTTGAAACC...CCCTTTCATAGCATCCAGAAGCTGGAAACAACCTAGATGTCCCATGACAGAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217588.3 |
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| 3UTR-3UTR TCA 90 bp | TCAAGAGTAGGTGGAAGAGTCAGAGACTCCCTAACTCCCACTATTAAGAGTCACTCTATATCTGCTCTGTaGGGGATATCAAGGGGAAAG | + |
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Preference number: 2 (lower is better) Translates to: SRVGGRVRDSLTPTIKSHSISAL*GISRGK Trigger: CTTTCCCCTTGATATCCCTCACAGAGCAGATATAGA...GTGACTCTTAATAGTGGGAGTTAGGGAGTCTCTGACTCTTCCACCTACTCTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217588.3 |
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| 3UTR-3UTR TCA 90 bp | TCAAGAGTAGGTGGAAGAGTCAGAGACTCCCTAACTCCCACTATTAAGAGTCACACTTCTTCAACCAAGTaGGTTCTGAGGAGACAGATC | + |
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Preference number: 2 (lower is better) Translates to: SRVGGRVRDSLTPTIKSHTSSTK*VLRRQI Trigger: GATCTGTCTCCTCAGAACTCACTTGGTTGAAGAAGT...GTGACTCTTAATAGTGGGAGTTAGGGAGTCTCTGACTCTTCCACCTACTCTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217588.3 |
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| 3UTR-3UTR CCA 90 bp | ATATATTTTTGTCCTGACTCAGTGCTATGCTCATATTCTCTTCTGTGGAGTAGGGAAAACAGGAGTGGGTaGGTGGGGAAGCACCCTCAT | + |
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Preference number: 2 (lower is better) Translates to: IYFCPDSVLCSYSLLWSRENRSG*VGKHPH Trigger: ATGAGGGTGCTTCCCCACCCACCCACTCCTGTTTTC...CCTACTCCACAGAAGAGAATATGAGCATAGCACTGAGTCAGGACAAAAATATAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000217588.3 |
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| 3UTR-3UTR CCA 90 bp | ATATATTTTTGTCCTGACTCAGTGCTATGCTCATATTCTCTTCTGTGGAGTAGGTCCTCATCTCAACCCTaGGTAAAGGAAGCCAGTAGG | + |
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Preference number: 2 (lower is better) Translates to: IYFCPDSVLCSYSLLWSRSSSQP*VKEASR Trigger: CCTACTGGCTTCCTTTACCCAGGGTTGAGATGAGGA...CCTACTCCACAGAAGAGAATATGAGCATAGCACTGAGTCAGGACAAAAATATAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217588.3 |
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| 3UTR-3UTR TCA 90 bp | AGAGTAGGTGGAAGAGTCAGAGACTCCCTAACTCCCACTATTAAGAGTCACAAACTCCAGAATCTTTCTTaGGAAAGTAAGAGCAAAGGT | + |
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Preference number: 2 (lower is better) Translates to: RVGGRVRDSLTPTIKSHKLQNLS*ESKSKG Trigger: ACCTTTGCTCTTACTTTCTCAAGAAAGATTCTGGAG...TTTGTGACTCTTAATAGTGGGAGTTAGGGAGTCTCTGACTCTTCCACCTACTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217588.3 |
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| 3UTR-3UTR TCA 90 bp | ATATATTTTTGTCCTGACTCAGTGCTATGCTCATATTCTCTTCTGTGGAGTAGGTTTGAGACAGAGGACTaGCATGGTGAAGCTATACTT | + |
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Preference number: 2 (lower is better) Translates to: IYFCPDSVLCSYSLLWSRFETED*HGEAIL Trigger: AAGTATAGCTTCACCATGTCAGTCCTCTGTCTCAAA...CCTACTCCACAGAAGAGAATATGAGCATAGCACTGAGTCAGGACAAAAATATAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217588.3 |
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| 3UTR-3UTR GCA 90 bp | ATATATTTTTGTCCTGACTCAGTGCTATGCTCATATTCTCTTCTGTGGAGTAGGAGACAGATCTATATCTaGTCTGTGAGGGATATCAAG | + |
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Preference number: 2 (lower is better) Translates to: IYFCPDSVLCSYSLLWSRRQIYI*SVRDIK Trigger: CTTGATATCCCTCACAGAGCAGATATAGATCTGTCT...CCTACTCCACAGAAGAGAATATGAGCATAGCACTGAGTCAGGACAAAAATATAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217588.3 |
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| 3UTR CAA 90 bp | GAAAAACATCGCATTTGGCATGGGAGAAAGCGTTCCTTATCAATTTaGCTGATTCCCATAATTGGGTGTTATCTTTACAAAAAGAAGGTG | + |
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Preference number: 2 (lower is better) Translates to: EKHRIWHGRKRSLSI*LIPIIGCYLYKKKV Trigger: CACCTTCTTTTTGTAAAGATAACACCCAATTATGGGAATCAGCAAAATTGATAAGGAACGCTTTCTCCCATGCCAAATGCGATGTTTTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000217588.3 |
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| 3UTR-3UTR TCA 90 bp | ATATATTTTTGTCCTGACTCAGTGCTATGCTCATATTCTCTTCTGTGGAGTAGGAGCTTCTGGATGCTATaGAAGGGGCAAAATATTTTT | + |
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Preference number: 2 (lower is better) Translates to: IYFCPDSVLCSYSLLWSRSFWML*KGQNIF Trigger: AAAAATATTTTGCCCCTTTCATAGCATCCAGAAGCT...CCTACTCCACAGAAGAGAATATGAGCATAGCACTGAGTCAGGACAAAAATATAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000217588.3 |
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| 3UTR-3UTR GCA 90 bp | ATATATTTTTGTCCTGACTCAGTGCTATGCTCATATTCTCTTCTGTGGAGTAGGTATTCATATGACTGTTaGAAACTACTAGAGCACAGA | + |
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Preference number: 2 (lower is better) Translates to: IYFCPDSVLCSYSLLWSRYSYDC*KLLEHR Trigger: TCTGTGCTCTAGTAGTTTGCAACAGTCATATGAATA...CCTACTCCACAGAAGAGAATATGAGCATAGCACTGAGTCAGGACAAAAATATAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217588.3 |
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| 3UTR-3UTR GCA 90 bp | ATATATTTTTGTCCTGACTCAGTGCTATGCTCATATTCTCTTCTGTGGAGTAGGACAATGGGAAAATGTTaGATTTCATGTGATGATGTG | + |
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Preference number: 2 (lower is better) Translates to: IYFCPDSVLCSYSLLWSRTMGKC*ISCDDV Trigger: CACATCATCACATGAAATGCAACATTTTCCCATTGT...CCTACTCCACAGAAGAGAATATGAGCATAGCACTGAGTCAGGACAAAAATATAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217588.3 |
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| 3UTR-3UTR CCA 90 bp | ATATATTTTTGTCCTGACTCAGTGCTATGCTCATATTCTCTTCTGTGGAGTAGGGAAAGGAGTGAAATATaGGAGCTTAATGTATGTCTA | + |
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Preference number: 2 (lower is better) Translates to: IYFCPDSVLCSYSLLWSRERSEI*ELNVCL Trigger: TAGACATACATTAAGCTCCCATATTTCACTCCTTTC...CCTACTCCACAGAAGAGAATATGAGCATAGCACTGAGTCAGGACAAAAATATAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217588.3 |
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| 3UTR GCA 72 bp | GTGGGAGGAGAGACTCTTGGGTCTAAGGGTGTTGGATaGCCCAATGTAGGAGAATGCCAGGGTGGGAAAACA | + |
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Preference number: 3 (lower is better) Translates to: VGGETLGSKGVG*PNVGECQGGKT Trigger: TGTTTTCCCACCCTGGCATTCTCCTACATTGGGGCATCCAACACCCTTAGACCCAAGAGTCTCTCCTCCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217588.3 |
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| 3UTR-3UTR CAA 90 bp | TCAAGAGTAGGTGGAAGAGTCAGAGACTCCCTAACTCCCACTATTAAGAGTCACACACTCCTAAGAATTTaGTGTGTTAACAGAGTGATC | + |
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Preference number: 3 (lower is better) Translates to: SRVGGRVRDSLTPTIKSHTLLRI*CVNRVI Trigger: GATCACTCTGTTAACACACAAAATTCTTAGGAGTGT...GTGACTCTTAATAGTGGGAGTTAGGGAGTCTCTGACTCTTCCACCTACTCTTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217588.3 |
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| 3UTR-3UTR CAA 90 bp | TCAAGAGTAGGTGGAAGAGTCAGAGACTCCCTAACTCCCACTATTAAGAGTCACGATCTGGGAAAGACTTaGTTTTACAACCATACAAAG | + |
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Preference number: 3 (lower is better) Translates to: SRVGGRVRDSLTPTIKSHDLGKT*FYNHTK Trigger: CTTTGTATGGTTGTAAAACAAAGTCTTTCCCAGATC...GTGACTCTTAATAGTGGGAGTTAGGGAGTCTCTGACTCTTCCACCTACTCTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217588.3 |
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| 3UTR GCA 72 bp | TCCATTCCCAATTTCTACATGATTCTAGGAGAGGAATaGCTCAGTGAGGGAATTATGTGCAGAATAAATTCA | + |
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Preference number: 3 (lower is better) Translates to: SIPNFYMILGEE*LSEGIMCRINS Trigger: TGAATTTATTCTGCACATAATTCCCTCACTGAGGCATTCCTCTCCTAGAATCATGTAGAAATTGGGAATGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217588.3 |
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| 3UTR CCA 72 bp | TGTCCTGACTCAGTGCTATGCTCATATTCTCTTCTGTaGAGTAGGTCTAAACTCCAATTAGAATATGATATG | + |
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Preference number: 3 (lower is better) Translates to: CPDSVLCSYSLL*SRSKLQLEYDM Trigger: CATATCATATTCTAATTGGAGTTTAGACCTACTCCACAGAAGAGAATATGAGCATAGCACTGAGTCAGGACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217588.3 |
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| 3UTR TCA 72 bp | AGGCACAGACTTTCAACTATAGTAACCAGAATAAGCTaGGCAAATGAAATAAAGGAAAACGTCACTGGATCT | + |
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Preference number: 3 (lower is better) Translates to: RHRLSTIVTRIS*ANEIKENVTGS Trigger: AGATCCAGTGACGTTTTCCTTTATTTCATTTGCTCAGCTTATTCTGGTTACTATAGTTGAAAGTCTGTGCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217588.3 |
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| 3UTR TCA 72 bp | TTTTTAGGGTTGCTGATGGGTCTCCAGAATCTTTCTTaGGAAAGTAAGAGCAAAGGTGGTGGTTATATATAT | + |
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Preference number: 3 (lower is better) Translates to: FLGLLMGLQNLS*ESKSKGGGYIY Trigger: ATATATATAACCACCACCTTTGCTCTTACTTTCTCAAGAAAGATTCTGGAGACCCATCAGCAACCCTAAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217588.3 |
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| 3UTR TCA 72 bp | CAATTTCTACATGATTCTAGGAGAGGAATGCCTCAGTaGGGGAATTATGTGCAGAATAAATTCAGGAATTCT | + |
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Preference number: 3 (lower is better) Translates to: QFLHDSRRGMPQ*GNYVQNKFRNS Trigger: AGAATTCCTGAATTTATTCTGCACATAATTCCCTCACTGAGGCATTCCTCTCCTAGAATCATGTAGAAATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217588.3 |
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| 3UTR TCA 72 bp | GAGATAGAGTGCATGGTGACAATACTATATAACACATaGGAAAAACTGTTAAGTAGTGCAGCAATATCTCTC | + |
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Preference number: 3 (lower is better) Translates to: EIECMVTILYNT*EKLLSSAAISL Trigger: GAGAGATATTGCTGCACTACTTAACAGTTTTTCTCATGTGTTATATAGTATTGTCACCATGCACTCTATCTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217588.3 |
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| 3UTR TCA 72 bp | AATTCTGACTTAAGTAGAGGTAAGGAATTAAAACACTaGGCAGAGATAGAGTGCATGGTGACAATACTATAT | + |
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Preference number: 3 (lower is better) Translates to: NSDLSRGKELKH*AEIECMVTILY Trigger: ATATAGTATTGTCACCATGCACTCTATCTCTGCTCAGTGTTTTAATTCCTTACCTCTACTTAAGTCAGAATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217588.3 |
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| 3UTR CCA 72 bp | AAAGCGTTCCTTATCAATTTTGCTGATTCCCATAATTaGGTGTTATCTTTACAAAAAGAAGGTGAGGAATCT | + |
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Preference number: 3 (lower is better) Translates to: KAFLINFADSHN*VLSLQKEGEES Trigger: AGATTCCTCACCTTCTTTTTGTAAAGATAACACCCAATTATGGGAATCAGCAAAATTGATAAGGAACGCTTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217588.3 |
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| CDS-3UTR GCA 90 bp | ACTCTTGGGTCTAAGGGTGTTGGATGCCCCAATGTAGGAGAATGCCAGGGTGGGAGTAAAGCAATGGAGTaGCAGAACCCCAGTATCCAG | + |
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Preference number: 4 (lower is better) Translates to: TLGSKGVGCPNVGECQGGSKAME*QNPSIQ Trigger: CTGGATACTGGGGTTCTGGCACTCCATTGCTTTACT...CCCACCCTGGCATTCTCCTACATTGGGGCATCCAACACCCTTAGACCCAAGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217588.3 |
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| CDS-3UTR CCA 90 bp | TGCTCTGTGAGGGATATCAAGGGGAAAGGAGTGAAATATGGGAGCTTAATGTATACACCTGCCAGCAAGTaGGCAGTGAAGAGCTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: CSVRDIKGKGVKYGSLMYTPASK*AVKSWV Trigger: GACCCAGCTCTTCACTGCCCACTTGCTGGCAGGTGT...ATACATTAAGCTCCCATATTTCACTCCTTTCCCCTTGATATCCCTCACAGAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217588.3 |
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| CDS-3UTR CCA 90 bp | TCAAGAGTAGGTGGAAGAGTCAGAGACTCCCTAACTCCCACTATTAAGAGTCACGTTGGGACCACAGAATaGCAGACTGAGCACCATCAG | + |
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Preference number: 4 (lower is better) Translates to: SRVGGRVRDSLTPTIKSHVGTTE*QTEHHQ Trigger: CTGATGGTGCTCAGTCTGCCATTCTGTGGTCCCAAC...GTGACTCTTAATAGTGGGAGTTAGGGAGTCTCTGACTCTTCCACCTACTCTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217588.3 |
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| CDS-3UTR TCA 90 bp | ACTCTTGGGTCTAAGGGTGTTGGATGCCCCAATGTAGGAGAATGCCAGGGTGGGAAGATACTAACAACATaGACATCTTTACAGACCAGC | + |
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Preference number: 4 (lower is better) Translates to: TLGSKGVGCPNVGECQGGKILTT*TSLQTS Trigger: GCTGGTCTGTAAAGATGTTCATGTTGTTAGTATCTT...CCCACCCTGGCATTCTCCTACATTGGGGCATCCAACACCCTTAGACCCAAGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217588.3 |
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| CDS-3UTR TCA 90 bp | TCTTCTGTCATGGGACATCTAGGTTGTTTCCAGCTTCTGGATGCTATGAAAGGGCCGCTTCCCTGCAGATaGTCTTGTCCTCAGAGAATA | + |
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Preference number: 4 (lower is better) Translates to: SSVMGHLGCFQLLDAMKGPLPCR*SCPQRI Trigger: TATTCTCTGAGGACAAGATCATCTGCAGGGAAGCGG...CCCTTTCATAGCATCCAGAAGCTGGAAACAACCTAGATGTCCCATGACAGAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217588.3 |
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| CDS-3UTR TCA 90 bp | TCTTCTGTCATGGGACATCTAGGTTGTTTCCAGCTTCTGGATGCTATGAAAGGGCACAGAATGGCAGACTaGGCACCATCAGTAGTAAAG | + |
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Preference number: 4 (lower is better) Translates to: SSVMGHLGCFQLLDAMKGHRMAD*APSVVK Trigger: CTTTACTACTGATGGTGCTCAGTCTGCCATTCTGTG...CCCTTTCATAGCATCCAGAAGCTGGAAACAACCTAGATGTCCCATGACAGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217588.3 |
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| CDS-3UTR TCA 90 bp | AGAGTAGGTGGAAGAGTCAGAGACTCCCTAACTCCCACTATTAAGAGTCACAAATTCTCAGTGTGTAGATaGCAGGATTTAGGATGGGGG | + |
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Preference number: 4 (lower is better) Translates to: RVGGRVRDSLTPTIKSHKFSVCR*QDLGWG Trigger: CCCCCATCCTAAATCCTGTCATCTACACACTGAGAA...TTTGTGACTCTTAATAGTGGGAGTTAGGGAGTCTCTGACTCTTCCACCTACTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217588.3 |
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| CDS-3UTR GCA 90 bp | TCAAGAGTAGGTGGAAGAGTCAGAGACTCCCTAACTCCCACTATTAAGAGTCACCGAGACCACACTTTGTaGATGGCACTTTTCATCTCA | + |
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Preference number: 4 (lower is better) Translates to: SRVGGRVRDSLTPTIKSHRDHTL*MALFIS Trigger: TGAGATGAAAAGTGCCATGCACAAAGTGTGGTCTCG...GTGACTCTTAATAGTGGGAGTTAGGGAGTCTCTGACTCTTCCACCTACTCTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217588.3 |
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| 3UTR CAA 72 bp | TTTCTGTATCCATTCTTCTGTCATGGGACATCTAGGTaGTTTCCAGCTTCTGGATGCTATGAAAGGGGCAAA | + |
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Preference number: 4 (lower is better) Translates to: FLYPFFCHGTSR*FPASGCYERGK Trigger: TTTGCCCCTTTCATAGCATCCAGAAGCTGGAAACAACCTAGATGTCCCATGACAGAAGAATGGATACAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217588.3 |
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| CDS-3UTR CCA 90 bp | ATATATTTTTGTCCTGACTCAGTGCTATGCTCATATTCTCTTCTGTGGAGTAGGACCACACTTTGTGCATaGCACTTTTCATCTCACTGT | + |
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Preference number: 4 (lower is better) Translates to: IYFCPDSVLCSYSLLWSRTTLCA*HFSSHC Trigger: ACAGTGAGATGAAAAGTGCCATGCACAAAGTGTGGT...CCTACTCCACAGAAGAGAATATGAGCATAGCACTGAGTCAGGACAAAAATATAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217588.3 |
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| CDS-3UTR CAA 90 bp | ACTCTTGGGTCTAAGGGTGTTGGATGCCCCAATGTAGGAGAATGCCAGGGTGGGGAACAGCAACTCTATTaGTCTATTCTCCCAAAGACC | + |
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Preference number: 5 (lower is better) Translates to: TLGSKGVGCPNVGECQGGEQQLY*SILPKT Trigger: GGTCTTTGGGAGAATAGACAAATAGAGTTGCTGTTC...CCCACCCTGGCATTCTCCTACATTGGGGCATCCAACACCCTTAGACCCAAGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217588.3 |
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| CDS-3UTR CAA 90 bp | ACTCTTGGGTCTAAGGGTGTTGGATGCCCCAATGTAGGAGAATGCCAGGGTGGGGAAATTTCCTTATCCTaGTTCTCACTTCCTGCAGGT | + |
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Preference number: 5 (lower is better) Translates to: TLGSKGVGCPNVGECQGGEISLS*FSLPAG Trigger: ACCTGCAGGAAGTGAGAACAAGGATAAGGAAATTTC...CCCACCCTGGCATTCTCCTACATTGGGGCATCCAACACCCTTAGACCCAAGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217588.3 |
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| CDS-3UTR CAA 90 bp | AGAGTAGGTGGAAGAGTCAGAGACTCCCTAACTCCCACTATTAAGAGTCACAAAAGCCGAGACCACACTTaGTGCATGGCACTTTTCATC | + |
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Preference number: 5 (lower is better) Translates to: RVGGRVRDSLTPTIKSHKSRDHT*CMALFI Trigger: GATGAAAAGTGCCATGCACAAAGTGTGGTCTCGGCT...TTTGTGACTCTTAATAGTGGGAGTTAGGGAGTCTCTGACTCTTCCACCTACTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217588.3 |
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| CDS TCA 90 bp | CAGAGCAGAATTACAAGATGGTTTCACGTATTTCAACCCCAAATTTaGCAGCCGAGACCACACTTTGTGCATGGCACTTTTCATCTCACT | + |
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Preference number: 5 (lower is better) Translates to: QSRITRWFHVFQPQI*QPRPHFVHGTFHLT Trigger: AGTGAGATGAAAAGTGCCATGCACAAAGTGTGGTCTCGGCTGTCAAATTTGGGGTTGAAATACGTGAAACCATCTTGTAATTCTGCTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099811.2 ENSMUST00000217588.3 |
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| CDS-3UTR CAA 90 bp | AGAGTAGGTGGAAGAGTCAGAGACTCCCTAACTCCCACTATTAAGAGTCACAAATCCCTGCAGATGATCTaGTCCTCAGAGAATACAATA | + |
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Preference number: 5 (lower is better) Translates to: RVGGRVRDSLTPTIKSHKSLQMI*SSENTI Trigger: TATTGTATTCTCTGAGGACAAGATCATCTGCAGGGA...TTTGTGACTCTTAATAGTGGGAGTTAGGGAGTCTCTGACTCTTCCACCTACTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217588.3 |
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| CDS-3UTR CAA 90 bp | TCAAGAGTAGGTGGAAGAGTCAGAGACTCCCTAACTCCCACTATTAAGAGTCACAGAGAAAATAATACATaGGTTGTTCGATTAGGTGGC | + |
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Preference number: 5 (lower is better) Translates to: SRVGGRVRDSLTPTIKSHRENNT*VVRLGG Trigger: GCCACCTAATCGAACAACCAATGTATTATTTTCTCT...GTGACTCTTAATAGTGGGAGTTAGGGAGTCTCTGACTCTTCCACCTACTCTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217588.3 |
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| CDS TCA 90 bp | AAAAGCACCATCCCAGAGTTAACAATTGCTAAGATACTAACAACATaGACATCTTTACAGACCAGCTTCAAAAGCGGCTTAATGTCACAG | + |
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Preference number: 5 (lower is better) Translates to: KSTIPELTIAKILTT*TSLQTSFKSGLMSQ Trigger: CTGTGACATTAAGCCGCTTTTGAAGCTGGTCTGTAAAGATGTTCATGTTGTTAGTATCTTAGCAATTGTTAACTCTGGGATGGTGCTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099811.2 ENSMUST00000217588.3 |
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| CDS GCA 72 bp | CAAGGCCATGGACACCAGGATGAAGATTTCCACACCTaGCAGCAAGTGGGCAGTGAAGAGCTGGGTCATGCA | + |
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Preference number: 6 (lower is better) Translates to: QGHGHQDEDFHT*QQVGSEELGHA Trigger: TGCATGACCCAGCTCTTCACTGCCCACTTGCTGGCAGGTGTGGAAATCTTCATCCTGGTGTCCATGGCCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099811.2 ENSMUST00000217588.3 |
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| CDS GCA 72 bp | GGCAGACTGAGCACCATCAGTAGTAAAGCAATGGAGTaGCAGAACCCCAGTATCCAGGCCGTGACAATCAAC | + |
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Preference number: 6 (lower is better) Translates to: GRLSTISSKAME*QNPSIQAVTIN Trigger: GTTGATTGTCACGGCCTGGATACTGGGGTTCTGGCACTCCATTGCTTTACTACTGATGGTGCTCAGTCTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099811.2 ENSMUST00000217588.3 |
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| CDS GCA 72 bp | TTCAACCCCAAATTTGACAGCCGAGACCACACTTTGTaGATGGCACTTTTCATCTCACTGTTTCTCAGTGTG | + |
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Preference number: 6 (lower is better) Translates to: FNPKFDSRDHTL*MALFISLFLSV Trigger: CACACTGAGAAACAGTGAGATGAAAAGTGCCATGCACAAAGTGTGGTCTCGGCTGTCAAATTTGGGGTTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099811.2 ENSMUST00000217588.3 |
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| CDS CAA 90 bp | TCAGAGCAGAATTACAAGATGGTTTCACGTATTTCAACCCCAAATTaGACAGCCGAGACCACACTTTGTGCATGGCACTTTTCATCTCAC | + |
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Preference number: 6 (lower is better) Translates to: SEQNYKMVSRISTPN*TAETTLCAWHFSSH Trigger: GTGAGATGAAAAGTGCCATGCACAAAGTGTGGTCTCGGCTGTCAAATTTGGGGTTGAAATACGTGAAACCATCTTGTAATTCTGCTCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099811.2 ENSMUST00000217588.3 |
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| CDS TCA 72 bp | ACTACAGGTAGAGAGTGCTTTCCGCTTCCCTGCAGATaGTCTTGTCCTCAGAGAATACAATATGAGTATGTA | + |
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Preference number: 6 (lower is better) Translates to: TTGRECFPLPCR*SCPQRIQYEYV Trigger: TACATACTCATATTGTATTCTCTGAGGACAAGATCATCTGCAGGGAAGCGGAAAGCACTCTCTACCTGTAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099811.2 ENSMUST00000217588.3 |
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| CDS TCA 72 bp | ATTACAAGATGGTTTCACGTATTTCAACCCCAAATTTaGCAGCCGAGACCACACTTTGTGCATGGCACTTTT | + |
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Preference number: 6 (lower is better) Translates to: ITRWFHVFQPQI*QPRPHFVHGTF Trigger: AAAAGTGCCATGCACAAAGTGTGGTCTCGGCTGTCAAATTTGGGGTTGAAATACGTGAAACCATCTTGTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099811.2 ENSMUST00000217588.3 |
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| CDS CAA 72 bp | AATTACAAGATGGTTTCACGTATTTCAACCCCAAATTaGACAGCCGAGACCACACTTTGTGCATGGCACTTT | + |
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Preference number: 6 (lower is better) Translates to: NYKMVSRISTPN*TAETTLCAWHF Trigger: AAAGTGCCATGCACAAAGTGTGGTCTCGGCTGTCAAATTTGGGGTTGAAATACGTGAAACCATCTTGTAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099811.2 ENSMUST00000217588.3 |
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| CDS TCA 72 bp | ATTGTTTGTACTTTCTGTGACCTGTTGGATAGTAGCTaGCCTAGGAACATCAGAGCAGAATTACAAGATGGT | + |
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Preference number: 6 (lower is better) Translates to: IVCTFCDLLDSS*PRNIRAELQDG Trigger: ACCATCTTGTAATTCTGCTCTGATGTTCCTAGGTCAGCTACTATCCAACAGGTCACAGAAAGTACAAACAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099811.2 ENSMUST00000217588.3 |
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| CDS TCA 72 bp | ATCCCAGAGTTAACAATTGCTAAGATACTAACAACATaGACATCTTTACAGACCAGCTTCAAAAGCGGCTTA | + |
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Preference number: 6 (lower is better) Translates to: IPELTIAKILTT*TSLQTSFKSGL Trigger: TAAGCCGCTTTTGAAGCTGGTCTGTAAAGATGTTCATGTTGTTAGTATCTTAGCAATTGTTAACTCTGGGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099811.2 ENSMUST00000217588.3 |
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