Pregenerated sensors for OLFR1199 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000089892Ensembl transcript IDs: ENSMUST00000099813.2, ENSMUST00000124021.3, ENSMUST00000131038.4, ENSMUST00000213138.3
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTGCAACAAAAGAGTCAATCTGTAGGTATTGCATGAGGACAACGTaGTCAAGATTGAGACTGAAACTCAAAGAATGTAAAATGAAGAGA | + |
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Preference number: 1 (lower is better) Translates to: AATKESICRYCMRTT*SRLRLKLKECKMKR Trigger: TCTCTTCATTTTACATTCTTTGAGTTTCAGTCTCAATCTTGACCACGTTGTCCTCATGCAATACCTACAGATTGACTCTTTTGTTGCAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000124021.3 ENSMUST00000131038.4 ENSMUST00000213138.3 |
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| 3UTR CCA 90 bp | TGTTGGTTTTGCAGAAGACCCAGATATATTTCTCAGCATCCACACTaGTATTCAAAACCATTTACAACTCCAATATCAGGTATCCAGTTT | + |
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Preference number: 1 (lower is better) Translates to: CWFCRRPRYISQHPH*YSKPFTTPISGIQF Trigger: AAACTGGATACCTGATATTGGAGTTGTAAATGGTTTTGAATACCAGTGTGGATGCTGAGAAATATATCTGGGTCTTCTGCAAAACCAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000124021.3 ENSMUST00000131038.4 ENSMUST00000213138.3 |
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| 3UTR-3UTR GCA 90 bp | TATCCAGTTTTCTCTTCTGATGTCTGTGTGGATACCAGGCACATACATAGTACATCAATCTGTAGGTATTaGATGAGGACAACGTGGTCA | + |
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Preference number: 2 (lower is better) Translates to: YPVFSSDVCVDTRHIHSTSICRY*MRTTWS Trigger: TGACCACGTTGTCCTCATGCAATACCTACAGATTGA...TGTACTATGTATGTGCCTGGTATCCACACAGACATCAGAAGAGAAAACTGGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124021.3 ENSMUST00000131038.4 ENSMUST00000213138.3 |
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| 3UTR-3UTR TCA 90 bp | TATTATAAAATACTGCAAATGATTTCATGTAGGGTCGCAGTCTATGGGAGATGTAGATACATATTGGGCTaGAGAGATGACTCAGTGTTT | + |
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Preference number: 2 (lower is better) Translates to: YYKILQMISCRVAVYGRCRYILG*RDDSVF Trigger: AAACACTGAGTCATCTCTTCAGCCCAATATGTATCT...ACATCTCCCATAGACTGCGACCCTACATGAAATCATTTGCAGTATTTTATAATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124021.3 ENSMUST00000131038.4 ENSMUST00000213138.3 |
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| 3UTR-3UTR TCA 90 bp | TCAAAACCATTTACAACTCCAATATCAGGTATCCAGTTTTCTCTTCTGATGTCTTGTCTCTTTATTGTATaGACTTATAGTCCCCATTCC | + |
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Preference number: 2 (lower is better) Translates to: SKPFTTPISGIQFSLLMSCLFIV*TYSPHS Trigger: GGAATGGGGACTATAAGTTCATACAATAAAGAGACA...AGACATCAGAAGAGAAAACTGGATACCTGATATTGGAGTTGTAAATGGTTTTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000124021.3 ENSMUST00000131038.4 ENSMUST00000213138.3 |
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| 3UTR-3UTR TCA 90 bp | TGGGCTAAAGTAAACCTAAGGTTGAATTATGTCTTAATGGTAGATCCTATGACTTGTCTCTTTATTGTATaGACTTATAGTCCCCATTCC | + |
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Preference number: 2 (lower is better) Translates to: WAKVNLRLNYVLMVDPMTCLFIV*TYSPHS Trigger: GGAATGGGGACTATAAGTTCATACAATAAAGAGACA...AGTCATAGGATCTACCATTAAGACATAATTCAACCTTAGGTTTACTTTAGCCCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124021.3 ENSMUST00000131038.4 ENSMUST00000213138.3 |
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| 3UTR-3UTR TCA 90 bp | GAACGTAAGGATAGAGTCAGAAACACAGTATTAGATATGAATAAAGAACAAGGGTGTCTCTTTATTGTATaGACTTATAGTCCCCATTCC | + |
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Preference number: 2 (lower is better) Translates to: ERKDRVRNTVLDMNKEQGCLFIV*TYSPHS Trigger: GGAATGGGGACTATAAGTTCATACAATAAAGAGACA...CCCTTGTTCTTTATTCATATCTAATACTGTGTTTCTGACTCTATCCTTACGTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124021.3 ENSMUST00000131038.4 ENSMUST00000213138.3 |
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| 3UTR-3UTR GCA 90 bp | TATTATAAAATACTGCAAATGATTTCATGTAGGGTCGCAGTCTATGGGAGATGTAGCTCATGTTGGTTTTaGAGAAGACCCAGATATATT | + |
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Preference number: 2 (lower is better) Translates to: YYKILQMISCRVAVYGRCSSCWF*RRPRYI Trigger: AATATATCTGGGTCTTCTGCAAAACCAACATGAGCT...ACATCTCCCATAGACTGCGACCCTACATGAAATCATTTGCAGTATTTTATAATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000124021.3 ENSMUST00000131038.4 ENSMUST00000213138.3 |
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| 3UTR-3UTR CAA 90 bp | TCAAAACCATTTACAACTCCAATATCAGGTATCCAGTTTTCTCTTCTGATGTCTACAGATTGGAGGGTTTaGACAGAAGAAAGGGAAGGG | + |
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Preference number: 3 (lower is better) Translates to: SKPFTTPISGIQFSLLMSTDWRV*TEEREG Trigger: CCCTTCCCTTTCTTCTGTCAAAACCCTCCAATCTGT...AGACATCAGAAGAGAAAACTGGATACCTGATATTGGAGTTGTAAATGGTTTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000124021.3 ENSMUST00000131038.4 ENSMUST00000213138.3 |
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| 3UTR-3UTR CAA 90 bp | TATTATAAAATACTGCAAATGATTTCATGTAGGGTCGCAGTCTATGGGAGATGTACAGATTGGAGGGTTTaGACAGAAGAAAGGGAAGGG | + |
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Preference number: 3 (lower is better) Translates to: YYKILQMISCRVAVYGRCTDWRV*TEEREG Trigger: CCCTTCCCTTTCTTCTGTCAAAACCCTCCAATCTGT...ACATCTCCCATAGACTGCGACCCTACATGAAATCATTTGCAGTATTTTATAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124021.3 ENSMUST00000131038.4 ENSMUST00000213138.3 |
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| 3UTR-3UTR CAA 90 bp | TGGGCTAAAGTAAACCTAAGGTTGAATTATGTCTTAATGGTAGATCCTATGACTACAGATTGGAGGGTTTaGACAGAAGAAAGGGAAGGG | + |
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Preference number: 3 (lower is better) Translates to: WAKVNLRLNYVLMVDPMTTDWRV*TEEREG Trigger: CCCTTCCCTTTCTTCTGTCAAAACCCTCCAATCTGT...AGTCATAGGATCTACCATTAAGACATAATTCAACCTTAGGTTTACTTTAGCCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124021.3 ENSMUST00000131038.4 ENSMUST00000213138.3 |
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| 3UTR-3UTR CAA 90 bp | TATCCAGTTTTCTCTTCTGATGTCTGTGTGGATACCAGGCACATACATAGTACATCAGTAAGATACAGATaGGAGGGTTTTGACAGAAGA | + |
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Preference number: 3 (lower is better) Translates to: YPVFSSDVCVDTRHIHSTSVRYR*EGFDRR Trigger: TCTTCTGTCAAAACCCTCCAATCTGTATCTTACTGA...TGTACTATGTATGTGCCTGGTATCCACACAGACATCAGAAGAGAAAACTGGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000124021.3 ENSMUST00000131038.4 ENSMUST00000213138.3 |
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| 3UTR-3UTR CAA 90 bp | TATCCAGTTTTCTCTTCTGATGTCTGTGTGGATACCAGGCACATACATAGTACAACAACGTGGTCAAGATaGAGACTGAAACTCAAAGAA | + |
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Preference number: 3 (lower is better) Translates to: YPVFSSDVCVDTRHIHSTTTWSR*RLKLKE Trigger: TTCTTTGAGTTTCAGTCTCAATCTTGACCACGTTGT...TGTACTATGTATGTGCCTGGTATCCACACAGACATCAGAAGAGAAAACTGGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124021.3 ENSMUST00000131038.4 ENSMUST00000213138.3 |
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| 3UTR GCA 72 bp | AGAGATGACTCAGTGTTTAAAAGCTCATGTTGGTTTTaGAGAAGACCCAGATATATTTCTCAGCATCCACAC | + |
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Preference number: 3 (lower is better) Translates to: RDDSVFKSSCWF*RRPRYISQHPH Trigger: GTGTGGATGCTGAGAAATATATCTGGGTCTTCTGCAAAACCAACATGAGCTTTTAAACACTGAGTCATCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000124021.3 ENSMUST00000131038.4 ENSMUST00000213138.3 |
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| 3UTR GCA 72 bp | AAAAATGCTGCAACAAAAGAGTCAATCTGTAGGTATTaGATGAGGACAACGTGGTCAAGATTGAGACTGAAA | + |
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Preference number: 3 (lower is better) Translates to: KNAATKESICRY*MRTTWSRLRLK Trigger: TTTCAGTCTCAATCTTGACCACGTTGTCCTCATGCAATACCTACAGATTGACTCTTTTGTTGCAGCATTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000124021.3 ENSMUST00000131038.4 ENSMUST00000213138.3 |
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| 3UTR CCA 72 bp | TGCAGAAGACCCAGATATATTTCTCAGCATCCACACTaGTATTCAAAACCATTTACAACTCCAATATCAGGT | + |
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Preference number: 3 (lower is better) Translates to: CRRPRYISQHPH*YSKPFTTPISG Trigger: ACCTGATATTGGAGTTGTAAATGGTTTTGAATACCAGTGTGGATGCTGAGAAATATATCTGGGTCTTCTGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124021.3 ENSMUST00000131038.4 ENSMUST00000213138.3 |
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| 3UTR CCA 72 bp | AAAGAGTCAATCTGTAGGTATTGCATGAGGACAACGTaGTCAAGATTGAGACTGAAACTCAAAGAATGTAAA | + |
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Preference number: 3 (lower is better) Translates to: KESICRYCMRTT*SRLRLKLKECK Trigger: TTTACATTCTTTGAGTTTCAGTCTCAATCTTGACCACGTTGTCCTCATGCAATACCTACAGATTGACTCTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124021.3 ENSMUST00000131038.4 ENSMUST00000213138.3 |
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| 3UTR-3UTR CAA 90 bp | TGGGCTAAAGTAAACCTAAGGTTGAATTATGTCTTAATGGTAGATCCTATGACTTCAGTAAGATACAGATaGGAGGGTTTTGACAGAAGA | + |
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Preference number: 3 (lower is better) Translates to: WAKVNLRLNYVLMVDPMTSVRYR*EGFDRR Trigger: TCTTCTGTCAAAACCCTCCAATCTGTATCTTACTGA...AGTCATAGGATCTACCATTAAGACATAATTCAACCTTAGGTTTACTTTAGCCCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124021.3 ENSMUST00000131038.4 ENSMUST00000213138.3 |
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| 3UTR TCA 72 bp | CTAAGTAATATGAGACAAAGAAGATACATATTGGGCTaGAGAGATGACTCAGTGTTTAAAAGCTCATGTTGG | + |
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Preference number: 3 (lower is better) Translates to: LSNMRQRRYILG*RDDSVFKSSCW Trigger: CCAACATGAGCTTTTAAACACTGAGTCATCTCTTCAGCCCAATATGTATCTTCTTTGTCTCATATTACTTAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124021.3 ENSMUST00000131038.4 ENSMUST00000213138.3 |
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| CDS-3UTR TCA 90 bp | ACAGGAAGAAGGTCAGAAAATACAATCACAACCAAAAGTGGTGTTAGGAACGTAATACCCGGCGGCTCATaGTGGTCATGTAGTGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: TGRRSENTITTKSGVRNVIPGGS*WSCSAG Trigger: CCCTGCACTACATGACCATCATGAGCCGCCGGGTAT...TACGTTCCTAACACCACTTTTGGTTGTGATTGTATTTTCTGACCTTCTTCCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000124021.3 ENSMUST00000131038.4 ENSMUST00000213138.3 |
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| CDS-3UTR TCA 90 bp | TCAAAACCATTTACAACTCCAATATCAGGTATCCAGTTTTCTCTTCTGATGTCTATACCCGGCGGCTCATaGTGGTCATGTAGTGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: SKPFTTPISGIQFSLLMSIPGGS*WSCSAG Trigger: CCCTGCACTACATGACCATCATGAGCCGCCGGGTAT...AGACATCAGAAGAGAAAACTGGATACCTGATATTGGAGTTGTAAATGGTTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000124021.3 ENSMUST00000131038.4 ENSMUST00000213138.3 |
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| CDS-3UTR GCA 90 bp | TATCCAGTTTTCTCTTCTGATGTCTGTGTGGATACCAGGCACATACATAGTACAACACTATGTTCTTCCTaGTGGGGTCCTGTGTCAAGC | + |
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Preference number: 4 (lower is better) Translates to: YPVFSSDVCVDTRHIHSTTLCSS*WGPVSS Trigger: GCTTGACACAGGACCCCAGCAGGAAGAACATAGTGT...TGTACTATGTATGTGCCTGGTATCCACACAGACATCAGAAGAGAAAACTGGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000124021.3 ENSMUST00000131038.4 ENSMUST00000213138.3 |
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| CDS-3UTR CCA 90 bp | TATCCAGTTTTCTCTTCTGATGTCTGTGTGGATACCAGGCACATACATAGTACAACAGGAAGAAATACATaGGACTCCCAAGAGCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: YPVFSSDVCVDTRHIHSTTGRNT*DSQEPG Trigger: GCCAGGCTCTTGGGAGTCCCATGTATTTCTTCCTGT...TGTACTATGTATGTGCCTGGTATCCACACAGACATCAGAAGAGAAAACTGGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124021.3 ENSMUST00000131038.4 ENSMUST00000213138.3 |
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| CDS-3UTR GCA 90 bp | TATCCAGTTTTCTCTTCTGATGTCTGTGTGGATACCAGGCACATACATAGTACACAAGGAAACTCACTGTaGAAATGGCTCCACTGTTGG | + |
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Preference number: 4 (lower is better) Translates to: YPVFSSDVCVDTRHIHSTQGNSL*KWLHCW Trigger: CCAACAGTGGAGCCATTTGCACAGTGAGTTTCCTTG...TGTACTATGTATGTGCCTGGTATCCACACAGACATCAGAAGAGAAAACTGGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124021.3 ENSMUST00000131038.4 ENSMUST00000213138.3 |
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| CDS-3UTR CCA 90 bp | ACAGGAAGAAGGTCAGAAAATACAATCACAACCAAAAGTGGTGTTAGGAACGTACTATGTTCTTCCTGCTaGGGTCCTGTGTCAAGCCAA | + |
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Preference number: 4 (lower is better) Translates to: TGRRSENTITTKSGVRNVLCSSC*GPVSSQ Trigger: TTGGCTTGACACAGGACCCCAGCAGGAAGAACATAG...TACGTTCCTAACACCACTTTTGGTTGTGATTGTATTTTCTGACCTTCTTCCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000124021.3 ENSMUST00000131038.4 ENSMUST00000213138.3 |
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| CDS-3UTR CCA 90 bp | TATCCAGTTTTCTCTTCTGATGTCTGTGTGGATACCAGGCACATACATAGTACAAACTCACTGTGCAAATaGCTCCACTGTTGGACACCA | + |
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Preference number: 4 (lower is better) Translates to: YPVFSSDVCVDTRHIHSTNSLCK*LHCWTP Trigger: TGGTGTCCAACAGTGGAGCCATTTGCACAGTGAGTT...TGTACTATGTATGTGCCTGGTATCCACACAGACATCAGAAGAGAAAACTGGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124021.3 ENSMUST00000131038.4 ENSMUST00000213138.3 |
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| CDS-3UTR CCA 90 bp | CTAAGGTTGAATTATGTCTTAATGGTAGATCCTATGACTAGCATGAGTGATGACCTATGTTCTTCCTGCTaGGGTCCTGTGTCAAGCCAA | + |
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Preference number: 4 (lower is better) Translates to: LRLNYVLMVDPMTSMSDDLCSSC*GPVSSQ Trigger: TTGGCTTGACACAGGACCCCAGCAGGAAGAACATAG...GTCATCACTCATGCTAGTCATAGGATCTACCATTAAGACATAATTCAACCTTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124021.3 ENSMUST00000131038.4 ENSMUST00000213138.3 |
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| CDS-3UTR GCA 90 bp | TATTATAAAATACTGCAAATGATTTCATGTAGGGTCGCAGTCTATGGGAGATGTACACTATGTTCTTCCTaGTGGGGTCCTGTGTCAAGC | + |
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Preference number: 4 (lower is better) Translates to: YYKILQMISCRVAVYGRCTLCSS*WGPVSS Trigger: GCTTGACACAGGACCCCAGCAGGAAGAACATAGTGT...ACATCTCCCATAGACTGCGACCCTACATGAAATCATTTGCAGTATTTTATAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000124021.3 ENSMUST00000131038.4 ENSMUST00000213138.3 |
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| CDS-3UTR GCA 90 bp | TCAAAACCATTTACAACTCCAATATCAGGTATCCAGTTTTCTCTTCTGATGTCTACACTATGTTCTTCCTaGTGGGGTCCTGTGTCAAGC | + |
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Preference number: 4 (lower is better) Translates to: SKPFTTPISGIQFSLLMSTLCSS*WGPVSS Trigger: GCTTGACACAGGACCCCAGCAGGAAGAACATAGTGT...AGACATCAGAAGAGAAAACTGGATACCTGATATTGGAGTTGTAAATGGTTTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000124021.3 ENSMUST00000131038.4 ENSMUST00000213138.3 |
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| CDS-3UTR GCA 90 bp | CTAAGGTTGAATTATGTCTTAATGGTAGATCCTATGACTAGCATGAGTGATGACCAAGGAAACTCACTGTaGAAATGGCTCCACTGTTGG | + |
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Preference number: 4 (lower is better) Translates to: LRLNYVLMVDPMTSMSDDQGNSL*KWLHCW Trigger: CCAACAGTGGAGCCATTTGCACAGTGAGTTTCCTTG...GTCATCACTCATGCTAGTCATAGGATCTACCATTAAGACATAATTCAACCTTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124021.3 ENSMUST00000131038.4 ENSMUST00000213138.3 |
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| CDS-3UTR CCA 90 bp | TATTATAAAATACTGCAAATGATTTCATGTAGGGTCGCAGTCTATGGGAGATGTCTATGTTCTTCCTGCTaGGGTCCTGTGTCAAGCCAA | + |
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Preference number: 4 (lower is better) Translates to: YYKILQMISCRVAVYGRCLCSSC*GPVSSQ Trigger: TTGGCTTGACACAGGACCCCAGCAGGAAGAACATAG...ACATCTCCCATAGACTGCGACCCTACATGAAATCATTTGCAGTATTTTATAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124021.3 ENSMUST00000131038.4 ENSMUST00000213138.3 |
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| CDS-3UTR CCA 90 bp | GAACGTAAGGATAGAGTCAGAAACACAGTATTAGATATGAATAAAGAACAAGGGGGACTCCCAAGAGCCTaGCTTGTCTTGACAGTAACA | + |
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Preference number: 4 (lower is better) Translates to: ERKDRVRNTVLDMNKEQGGLPRA*LVLTVT Trigger: TGTTACTGTCAAGACAAGCCAGGCTCTTGGGAGTCC...CCCTTGTTCTTTATTCATATCTAATACTGTGTTTCTGACTCTATCCTTACGTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000124021.3 ENSMUST00000131038.4 ENSMUST00000213138.3 |
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| CDS-3UTR CCA 90 bp | TGGGCTAAAGTAAACCTAAGGTTGAATTATGTCTTAATGGTAGATCCTATGACTGGACTCCCAAGAGCCTaGCTTGTCTTGACAGTAACA | + |
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Preference number: 4 (lower is better) Translates to: WAKVNLRLNYVLMVDPMTGLPRA*LVLTVT Trigger: TGTTACTGTCAAGACAAGCCAGGCTCTTGGGAGTCC...AGTCATAGGATCTACCATTAAGACATAATTCAACCTTAGGTTTACTTTAGCCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124021.3 ENSMUST00000131038.4 ENSMUST00000213138.3 |
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| CDS-3UTR CCA 90 bp | GAACGTAAGGATAGAGTCAGAAACACAGTATTAGATATGAATAAAGAACAAGGGACAGGAAGAAATACATaGGACTCCCAAGAGCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: ERKDRVRNTVLDMNKEQGTGRNT*DSQEPG Trigger: GCCAGGCTCTTGGGAGTCCCATGTATTTCTTCCTGT...CCCTTGTTCTTTATTCATATCTAATACTGTGTTTCTGACTCTATCCTTACGTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124021.3 ENSMUST00000131038.4 ENSMUST00000213138.3 |
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| CDS-3UTR CCA 90 bp | TGGGCTAAAGTAAACCTAAGGTTGAATTATGTCTTAATGGTAGATCCTATGACTACAGGAAGAAATACATaGGACTCCCAAGAGCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: WAKVNLRLNYVLMVDPMTTGRNT*DSQEPG Trigger: GCCAGGCTCTTGGGAGTCCCATGTATTTCTTCCTGT...AGTCATAGGATCTACCATTAAGACATAATTCAACCTTAGGTTTACTTTAGCCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124021.3 ENSMUST00000131038.4 ENSMUST00000213138.3 |
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| CDS-3UTR CCA 90 bp | CTAAGGTTGAATTATGTCTTAATGGTAGATCCTATGACTAGCATGAGTGATGACAACTCACTGTGCAAATaGCTCCACTGTTGGACACCA | + |
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Preference number: 4 (lower is better) Translates to: LRLNYVLMVDPMTSMSDDNSLCK*LHCWTP Trigger: TGGTGTCCAACAGTGGAGCCATTTGCACAGTGAGTT...GTCATCACTCATGCTAGTCATAGGATCTACCATTAAGACATAATTCAACCTTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124021.3 ENSMUST00000131038.4 ENSMUST00000213138.3 |
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| CDS-3UTR CCA 90 bp | TATTATAAAATACTGCAAATGATTTCATGTAGGGTCGCAGTCTATGGGAGATGTAACTCACTGTGCAAATaGCTCCACTGTTGGACACCA | + |
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Preference number: 4 (lower is better) Translates to: YYKILQMISCRVAVYGRCNSLCK*LHCWTP Trigger: TGGTGTCCAACAGTGGAGCCATTTGCACAGTGAGTT...ACATCTCCCATAGACTGCGACCCTACATGAAATCATTTGCAGTATTTTATAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124021.3 ENSMUST00000131038.4 ENSMUST00000213138.3 |
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| CDS-3UTR TCA 90 bp | CTAAGGTTGAATTATGTCTTAATGGTAGATCCTATGACTAGCATGAGTGATGACTGTAAATCAGAGGATTaGGCAGAGGTGTTCCAATTG | + |
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Preference number: 4 (lower is better) Translates to: LRLNYVLMVDPMTSMSDDCKSED*AEVFQL Trigger: CAATTGGAACACCTCTGCTCAATCCTCTGATTTACA...GTCATCACTCATGCTAGTCATAGGATCTACCATTAAGACATAATTCAACCTTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124021.3 ENSMUST00000131038.4 ENSMUST00000213138.3 |
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| CDS-3UTR CCA 90 bp | TATCCAGTTTTCTCTTCTGATGTCTGTGTGGATACCAGGCACATACATAGTACAATGACCACAATAATGTaGGATATACAGGTAGATAGG | + |
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Preference number: 4 (lower is better) Translates to: YPVFSSDVCVDTRHIHSTMTTIM*DIQVDR Trigger: CCTATCTACCTGTATATCCCACATTATTGTGGTCAT...TGTACTATGTATGTGCCTGGTATCCACACAGACATCAGAAGAGAAAACTGGATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124021.3 ENSMUST00000131038.4 ENSMUST00000213138.3 |
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| CDS-3UTR TCA 90 bp | TATTATAAAATACTGCAAATGATTTCATGTAGGGTCGCAGTCTATGGGAGATGTAAGGCTAGGAATATCTaGACTAAAGAATGCACGCAG | + |
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Preference number: 4 (lower is better) Translates to: YYKILQMISCRVAVYGRCKARNI*TKECTQ Trigger: CTGCGTGCATTCTTTAGTTCAGATATTCCTAGCCTT...ACATCTCCCATAGACTGCGACCCTACATGAAATCATTTGCAGTATTTTATAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124021.3 ENSMUST00000131038.4 ENSMUST00000213138.3 |
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| CDS-3UTR TCA 90 bp | TGGGCTAAAGTAAACCTAAGGTTGAATTATGTCTTAATGGTAGATCCTATGACTAAGGCTAGGAATATCTaGACTAAAGAATGCACGCAG | + |
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Preference number: 4 (lower is better) Translates to: WAKVNLRLNYVLMVDPMTKARNI*TKECTQ Trigger: CTGCGTGCATTCTTTAGTTCAGATATTCCTAGCCTT...AGTCATAGGATCTACCATTAAGACATAATTCAACCTTAGGTTTACTTTAGCCCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124021.3 ENSMUST00000131038.4 ENSMUST00000213138.3 |
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| CDS-3UTR CCA 90 bp | ACTGGTATTCAAAACCATTTACAACTCCAATATCAGGTATCCAGTTTTCTCTTCATGACCACAATAATGTaGGATATACAGGTAGATAGG | + |
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Preference number: 4 (lower is better) Translates to: TGIQNHLQLQYQVSSFLFMTTIM*DIQVDR Trigger: CCTATCTACCTGTATATCCCACATTATTGTGGTCAT...GAAGAGAAAACTGGATACCTGATATTGGAGTTGTAAATGGTTTTGAATACCAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000124021.3 ENSMUST00000131038.4 ENSMUST00000213138.3 |
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| CDS-3UTR CAA 90 bp | TATCCAGTTTTCTCTTCTGATGTCTGTGTGGATACCAGGCACATACATAGTACAAGAGCCTGGCTTGTCTaGACAGTAACAATGATAAGC | + |
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Preference number: 5 (lower is better) Translates to: YPVFSSDVCVDTRHIHSTRAWLV*TVTMIS Trigger: GCTTATCATTGTTACTGTCAAGACAAGCCAGGCTCT...TGTACTATGTATGTGCCTGGTATCCACACAGACATCAGAAGAGAAAACTGGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124021.3 ENSMUST00000131038.4 ENSMUST00000213138.3 |
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| CDS-3UTR CAA 90 bp | CTAAGGTTGAATTATGTCTTAATGGTAGATCCTATGACTAGCATGAGTGATGACAGAGCCTGGCTTGTCTaGACAGTAACAATGATAAGC | + |
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Preference number: 5 (lower is better) Translates to: LRLNYVLMVDPMTSMSDDRAWLV*TVTMIS Trigger: GCTTATCATTGTTACTGTCAAGACAAGCCAGGCTCT...GTCATCACTCATGCTAGTCATAGGATCTACCATTAAGACATAATTCAACCTTAG 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124021.3 ENSMUST00000131038.4 ENSMUST00000213138.3 |
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| CDS-3UTR CAA 90 bp | TGGGCTAAAGTAAACCTAAGGTTGAATTATGTCTTAATGGTAGATCCTATGACTAGAGCCTGGCTTGTCTaGACAGTAACAATGATAAGC | + |
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Preference number: 5 (lower is better) Translates to: WAKVNLRLNYVLMVDPMTRAWLV*TVTMIS Trigger: GCTTATCATTGTTACTGTCAAGACAAGCCAGGCTCT...AGTCATAGGATCTACCATTAAGACATAATTCAACCTTAGGTTTACTTTAGCCCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124021.3 ENSMUST00000131038.4 ENSMUST00000213138.3 |
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| CDS CAA 72 bp | AAGAAATACATGGGACTCCCAAGAGCCTGGCTTGTCTaGACAGTAACAATGATAAGCAAGTTGCCCAGTAAG | + |
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Preference number: 6 (lower is better) Translates to: KKYMGLPRAWLV*TVTMISKLPSK Trigger: CTTACTGGGCAACTTGCTTATCATTGTTACTGTCAAGACAAGCCAGGCTCTTGGGAGTCCCATGTATTTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099813.2 ENSMUST00000124021.3 ENSMUST00000131038.4 ENSMUST00000213138.3 |
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| CDS CAA 72 bp | GATCTCCAGACAGCCAAAGAAGTGAAATGTAAAGATTaGGATTATGCACTCAGTGAAAGAGATAGAGGCCTC | + |
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Preference number: 6 (lower is better) Translates to: DLQTAKEVKCKD*DYALSERDRGL Trigger: GAGGCCTCTATCTCTTTCACTGAGTGCATAATCCAAATCTTTACATTTCACTTCTTTGGCTGTCTGGAGATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099813.2 ENSMUST00000124021.3 ENSMUST00000131038.4 ENSMUST00000213138.3 |
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