Pregenerated sensors for OLFR1198 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075117Ensembl transcript IDs: ENSMUST00000099814.2, ENSMUST00000215179.3, ENSMUST00000215529.3
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGAAGCAGGAGCTGATGCAGAGGCCACAGAGGGATGTTCCTTACTaGCTTGCCTCCCCTGGCTTACTCAGCCTGCTCTCTTATAGAACC | + |
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Preference number: 1 (lower is better) Translates to: RKQELMQRPQRDVPY*LASPGLLSLLSYRT Trigger: GGTTCTATAAGAGAGCAGGCTGAGTAAGCCAGGGGAGGCAAGCCAGTAAGGAACATCCCTCTGTGGCCTCTGCATCAGCTCCTGCTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| 3UTR CCA 90 bp | CTAATCCTCAAGAGACTGGAAGCTTCAGGGAATTTAGAGGTCAAGTaGGGTGGGTGTGGGGTAAGGACATGGGGACATCCACGTGGAGAC | + |
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Preference number: 1 (lower is better) Translates to: LILKRLEASGNLEVK*GGCGVRTWGHPRGD Trigger: GTCTCCACGTGGATGTCCCCATGTCCTTACCCCACACCCACCCCACTTGACCTCTAAATTCCCTGAAGCTTCCAGTCTCTTGAGGATTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| 3UTR TCA 90 bp | AGGTTATGGAGCACTCATGAAAAGGGACCTAGCATGACTGCCCTCTaGAAGACCCAACAAGCAGCTGGAAGAGTCAGATGTAGATATTTG | + |
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Preference number: 1 (lower is better) Translates to: RLWSTHEKGPSMTAL*KTQQAAGRVRCRYL Trigger: CAAATATCTACATCTGACTCTTCCAGCTGCTTGTTGGGTCTTTCAGAGGGCAGTCATGCTAGGTCCCTTTTCATGAGTGCTCCATAACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| 3UTR TCA 90 bp | TCAACTGAAGCTCCTTTCTCTGTGATAACTCCAGCTGTGTCAAGTTaGCACAAAACTAGCCAGTACAGGCCTAAAGGCCTAGAATTTTGT | + |
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Preference number: 1 (lower is better) Translates to: STEAPFSVITPAVSS*HKTSQYRPKGLEFC Trigger: ACAAAATTCTAGGCCTTTAGGCCTGTACTGGCTAGTTTTGTGTCAACTTGACACAGCTGGAGTTATCACAGAGAAAGGAGCTTCAGTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| 3UTR CCA 90 bp | GCAGGGTTTCTATTCCTGCACAAACATCATGACCAAGAAGCAAATTaGAGAGGGAAGGGTTTATTCAGCTTACACTTCCACATTGCTGTT | + |
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Preference number: 1 (lower is better) Translates to: AGFLFLHKHHDQEAN*RGKGLFSLHFHIAV Trigger: AACAGCAATGTGGAAGTGTAAGCTGAATAAACCCTTCCCTCTCCAATTTGCTTCTTGGTCATGATGTTTGTGCAGGAATAGAAACCCTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| 3UTR TCA 90 bp | ACACACACACACAAATTACTCACACAACTAAGACTCAGGCAACATTaGAGAGAGGGAGAAAAGACTCAGAACCAGAGAATAGAGGACTTT | + |
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Preference number: 1 (lower is better) Translates to: THTHKLLTQLRLRQH*REGEKTQNQRIEDF Trigger: AAAGTCCTCTATTCTCTGGTTCTGAGTCTTTTCTCCCTCTCTTCAATGTTGCCTGAGTCTTAGTTGTGTGAGTAATTTGTGTGTGTGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| 3UTR CCA 90 bp | CTGAGTAAGTGGGTACTTAAAGGAAGAAACCACAACTCAAGAAGGTaGGAAGGGAGTTGTTGGAAAATACCAAAAATACCAGTTAAGAGT | + |
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Preference number: 1 (lower is better) Translates to: LSKWVLKGRNHNSRR*EGSCWKIPKIPVKS Trigger: ACTCTTAACTGGTATTTTTGGTATTTTCCAACAACTCCCTTCCCACCTTCTTGAGTTGTGGTTTCTTCCTTTAAGTACCCACTTACTCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| 3UTR TCA 90 bp | TCAGAACCAGAGAATAGAGGACTTTGCTTTGAGATTGCGTCTCCTTaGAACAATGGAAACTATATCCATATAGTCTCAACAACATGGTTG | + |
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Preference number: 1 (lower is better) Translates to: SEPENRGLCFEIASP*NNGNYIHIVSTTWL Trigger: CAACCATGTTGTTGAGACTATATGGATATAGTTTCCATTGTTTCAAGGAGACGCAATCTCAAAGCAAAGTCCTCTATTCTCTGGTTCTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| 3UTR-3UTR CCA 90 bp | TCATCACCAAGGAAGTCAGGACTGGAACTCAAGCAGGTCAGGAAGCAGGAGCTGAATTTAGAGGTCAAGTaGGGTGGGTGTGGGGTAAGG | + |
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Preference number: 2 (lower is better) Translates to: SSPRKSGLELKQVRKQELNLEVK*GGCGVR Trigger: CCTTACCCCACACCCACCCCACTTGACCTCTAAATT...CAGCTCCTGCTTCCTGACCTGCTTGAGTTCCAGTCCTGACTTCCTTGGTGATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| 3UTR-3UTR TCA 90 bp | ATTGCTGTTCATCACCAAGGAAGTCAGGACTGGAACTCAAGCAGGTCAGGAAGCGGGATGTGGAACAGTTaGAGGTGGATGGGGGATGAA | + |
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Preference number: 2 (lower is better) Translates to: IAVHHQGSQDWNSSRSGSGMWNS*RWMGDE Trigger: TTCATCCCCCATCCACCTTCAACTGTTCCACATCCC...GCTTCCTGACCTGCTTGAGTTCCAGTCCTGACTTCCTTGGTGATGAACAGCAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| 3UTR-3UTR TCA 90 bp | GTCAGGACTGGAACTCAAGCAGGTCAGGAAGCAGGAGCTGATGCAGAGGCCACAATTAATCAGGACCCCTaGGATCTTTCAAACACTAGA | + |
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Preference number: 2 (lower is better) Translates to: VRTGTQAGQEAGADAEATINQDP*DLSNTR Trigger: TCTAGTGTTTGAAAGATCTCAGGGGTCCTGATTAAT...TGTGGCCTCTGCATCAGCTCCTGCTTCCTGACCTGCTTGAGTTCCAGTCCTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| 3UTR-3UTR CCA 90 bp | GTTTATTCAGCTTACACTTCCACATTGCTGTTCATCACCAAGGAAGTCAGGACTCAAGTGGGGTGGGTGTaGGGTAAGGACATGGGGACA | + |
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Preference number: 2 (lower is better) Translates to: VYSAYTSTLLFITKEVRTQVGWV*GKDMGT Trigger: TGTCCCCATGTCCTTACCCCACACCCACCCCACTTG...AGTCCTGACTTCCTTGGTGATGAACAGCAATGTGGAAGTGTAAGCTGAATAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| 3UTR-3UTR CCA 90 bp | TCTCATGAAGGCATTTCCTCAACTGAAGCTCCTTTCTCTGTGATAACTCCAGCTAGAGGTCAAGTGGGGTaGGTGTGGGGTAAGGACATG | + |
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Preference number: 2 (lower is better) Translates to: SHEGISSTEAPFSVITPARGQVG*VWGKDM Trigger: CATGTCCTTACCCCACACCCACCCCACTTGACCTCT...AGCTGGAGTTATCACAGAGAAAGGAGCTTCAGTTGAGGAAATGCCTTCATGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| 3UTR-3UTR CCA 90 bp | AAATTGGAGAGGGAAGGGTTTATTCAGCTTACACTTCCACATTGCTGTTCATCACAAGTGGGGTGGGTGTaGGGTAAGGACATGGGGACA | + |
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Preference number: 2 (lower is better) Translates to: KLEREGFIQLTLPHCCSSQVGWV*GKDMGT Trigger: TGTCCCCATGTCCTTACCCCACACCCACCCCACTTG...TGATGAACAGCAATGTGGAAGTGTAAGCTGAATAAACCCTTCCCTCTCCAATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| 3UTR-3UTR GCA 90 bp | AATCCTCAAGAGACTGGAAGCTTCAGGGAATTTAGAGGTCAAGTGGGGTGGGTGGAGAATAGAGGACTTTaGTTTGAGATTGCGTCTCCT | + |
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Preference number: 2 (lower is better) Translates to: NPQETGSFREFRGQVGWVENRGL*FEIASP Trigger: AGGAGACGCAATCTCAAAGCAAAGTCCTCTATTCTC...CACCCACCCCACTTGACCTCTAAATTCCCTGAAGCTTCCAGTCTCTTGAGGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| 3UTR-3UTR TCA 90 bp | AAATTGGAGAGGGAAGGGTTTATTCAGCTTACACTTCCACATTGCTGTTCATCAAAGCAGAGAGAAGGGTaGTCCTGTAGGAGGACCAGA | + |
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Preference number: 2 (lower is better) Translates to: KLEREGFIQLTLPHCCSSKQREG*SCRRTR Trigger: TCTGGTCCTCCTACAGGATCACCCTTCTCTCTGCTT...TGATGAACAGCAATGTGGAAGTGTAAGCTGAATAAACCCTTCCCTCTCCAATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| 3UTR-3UTR GCA 90 bp | TCATCACCAAGGAAGTCAGGACTGGAACTCAAGCAGGTCAGGAAGCAGGAGCTGTCAGATGTAGATATTTaGACCCAAGAAATGGAAAGA | + |
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Preference number: 2 (lower is better) Translates to: SSPRKSGLELKQVRKQELSDVDI*TQEMER Trigger: TCTTTCCATTTCTTGGGTGCAAATATCTACATCTGA...CAGCTCCTGCTTCCTGACCTGCTTGAGTTCCAGTCCTGACTTCCTTGGTGATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| 3UTR-3UTR TCA 90 bp | ATTGCTGTTCATCACCAAGGAAGTCAGGACTGGAACTCAAGCAGGTCAGGAAGCCCCTTGATCACTAATTaGGAAAATGCCTTACAGTTA | + |
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Preference number: 2 (lower is better) Translates to: IAVHHQGSQDWNSSRSGSPLITN*ENALQL Trigger: TAACTGTAAGGCATTTTCTCAATTAGTGATCAAGGG...GCTTCCTGACCTGCTTGAGTTCCAGTCCTGACTTCCTTGGTGATGAACAGCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| 3UTR-3UTR TCA 90 bp | ATTCAGCTTACACTTCCACATTGCTGTTCATCACCAAGGAAGTCAGGACTGGAAGATGATCCCTGTTGTTaGATTAGGGAAGGCTTAAAG | + |
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Preference number: 2 (lower is better) Translates to: IQLTLPHCCSSPRKSGLEDDPCC*IREGLK Trigger: CTTTAAGCCTTCCCTAATTCAACAACAGGGATCATC...TTCCAGTCCTGACTTCCTTGGTGATGAACAGCAATGTGGAAGTGTAAGCTGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| 3UTR-3UTR GCA 90 bp | ATTGCTGTTCATCACCAAGGAAGTCAGGACTGGAACTCAAGCAGGTCAGGAAGCTCAGATGTAGATATTTaGACCCAAGAAATGGAAAGA | + |
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Preference number: 2 (lower is better) Translates to: IAVHHQGSQDWNSSRSGSSDVDI*TQEMER Trigger: TCTTTCCATTTCTTGGGTGCAAATATCTACATCTGA...GCTTCCTGACCTGCTTGAGTTCCAGTCCTGACTTCCTTGGTGATGAACAGCAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| 3UTR-3UTR TCA 90 bp | ATCATGACCAAGAAGCAAATTGGAGAGGGAAGGGTTTATTCAGCTTACACTTCCGATGATCCCTGTTGTTaGATTAGGGAAGGCTTAAAG | + |
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Preference number: 2 (lower is better) Translates to: IMTKKQIGEGRVYSAYTSDDPCC*IREGLK Trigger: CTTTAAGCCTTCCCTAATTCAACAACAGGGATCATC...GGAAGTGTAAGCTGAATAAACCCTTCCCTCTCCAATTTGCTTCTTGGTCATGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| 3UTR-3UTR GCA 90 bp | CAGTCCTCATGGCTGGGGGTCTTATCTTCTTGGGTCTTGAAACTTTTGTTGACTACTGCCTTGTTATCTTaGTGTGTTGCTCACATTTAT | + |
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Preference number: 2 (lower is better) Translates to: QSSWLGVLSSWVLKLLLTTALLS*CVAHIY Trigger: ATAAATGTGAGCAACACAGCAAGATAACAAGGCAGT...AGTCAACAAAAGTTTCAAGACCCAAGAAGATAAGACCCCCAGCCATGAGGACTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| 3UTR-3UTR CCA 90 bp | CCAAGAAGCAAATTGGAGAGGGAAGGGTTTATTCAGCTTACACTTCCACATTGCGGGGTCTTATCTTCTTaGGTCTTGAAACTTTTGTTG | + |
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Preference number: 2 (lower is better) Translates to: PRSKLEREGFIQLTLPHCGVLSS*VLKLLL Trigger: CAACAAAAGTTTCAAGACCCAAGAAGATAAGACCCC...GCAATGTGGAAGTGTAAGCTGAATAAACCCTTCCCTCTCCAATTTGCTTCTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| 3UTR-3UTR GCA 90 bp | CAGTCCTCATGGCTGGGGGTCTTATCTTCTTGGGTCTTGAAACTTTTGTTGACTGTTATCTTGCTGTGTTaGTCACATTTATTCTGTAGA | + |
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Preference number: 2 (lower is better) Translates to: QSSWLGVLSSWVLKLLLTVILLC*SHLFCR Trigger: TCTACAGAATAAATGTGAGCAACACAGCAAGATAAC...AGTCAACAAAAGTTTCAAGACCCAAGAAGATAAGACCCCCAGCCATGAGGACTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| 3UTR-3UTR GCA 90 bp | TACACAGTCCTCATGGCTGGGGGTCTTATCTTCTTGGGTCTTGAAACTTTTGTTACTGCCTTGTTATCTTaGTGTGTTGCTCACATTTAT | + |
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Preference number: 2 (lower is better) Translates to: YTVLMAGGLIFLGLETFVTALLS*CVAHIY Trigger: ATAAATGTGAGCAACACAGCAAGATAACAAGGCAGT...AACAAAAGTTTCAAGACCCAAGAAGATAAGACCCCCAGCCATGAGGACTGTGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| 3UTR-3UTR GCA 90 bp | CAAATTGGAGAGGGAAGGGTTTATTCAGCTTACACTTCCACATTGCTGTTCATCCATACAGTAGAGGATTaGAGGTTCTGTGGTAATTCA | + |
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Preference number: 2 (lower is better) Translates to: QIGEGRVYSAYTSTLLFIHTVED*RFCGNS Trigger: TGAATTACCACAGAACCTGCAATCCTCTACTGTATG...GATGAACAGCAATGTGGAAGTGTAAGCTGAATAAACCCTTCCCTCTCCAATTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| 3UTR-3UTR CCA 90 bp | GTTTATTCAGCTTACACTTCCACATTGCTGTTCATCACCAAGGAAGTCAGGACTTTTGCACCCAAGAAATaGAAAGAAGCAGCTGATGAT | + |
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Preference number: 2 (lower is better) Translates to: VYSAYTSTLLFITKEVRTFAPKK*KEAADD Trigger: ATCATCAGCTGCTTCTTTCCATTTCTTGGGTGCAAA...AGTCCTGACTTCCTTGGTGATGAACAGCAATGTGGAAGTGTAAGCTGAATAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| 3UTR-3UTR CCA 90 bp | CAAATTGGAGAGGGAAGGGTTTATTCAGCTTACACTTCCACATTGCTGTTCATCCTATTACTGAGGTTATaGAGCACTCATGAAAAGGGA | + |
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Preference number: 2 (lower is better) Translates to: QIGEGRVYSAYTSTLLFILLLRL*STHEKG Trigger: TCCCTTTTCATGAGTGCTCCATAACCTCAGTAATAG...GATGAACAGCAATGTGGAAGTGTAAGCTGAATAAACCCTTCCCTCTCCAATTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| 3UTR-3UTR TCA 90 bp | AAATTGGAGAGGGAAGGGTTTATTCAGCTTACACTTCCACATTGCTGTTCATCAGAGATTGCGTCTCCTTaGAACAATGGAAACTATATC | + |
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Preference number: 2 (lower is better) Translates to: KLEREGFIQLTLPHCCSSEIASP*NNGNYI Trigger: GATATAGTTTCCATTGTTTCAAGGAGACGCAATCTC...TGATGAACAGCAATGTGGAAGTGTAAGCTGAATAAACCCTTCCCTCTCCAATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| 3UTR-3UTR CCA 90 bp | AAATTGGAGAGGGAAGGGTTTATTCAGCTTACACTTCCACATTGCTGTTCATCAGGGGTCTTATCTTCTTaGGTCTTGAAACTTTTGTTG | + |
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Preference number: 2 (lower is better) Translates to: KLEREGFIQLTLPHCCSSGVLSS*VLKLLL Trigger: CAACAAAAGTTTCAAGACCCAAGAAGATAAGACCCC...TGATGAACAGCAATGTGGAAGTGTAAGCTGAATAAACCCTTCCCTCTCCAATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| 3UTR-3UTR GCA 90 bp | GTTTATTCAGCTTACACTTCCACATTGCTGTTCATCACCAAGGAAGTCAGGACTGTTATCTTGCTGTGTTaGTCACATTTATTCTGTAGA | + |
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Preference number: 2 (lower is better) Translates to: VYSAYTSTLLFITKEVRTVILLC*SHLFCR Trigger: TCTACAGAATAAATGTGAGCAACACAGCAAGATAAC...AGTCCTGACTTCCTTGGTGATGAACAGCAATGTGGAAGTGTAAGCTGAATAAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| 3UTR-3UTR TCA 90 bp | ATATGTGATCTGTATTACACACACACACACACACAAATTACTCACACAACTAAGGAGATTGCGTCTCCTTaGAACAATGGAAACTATATC | + |
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Preference number: 2 (lower is better) Translates to: ICDLYYTHTHTQITHTTKEIASP*NNGNYI Trigger: GATATAGTTTCCATTGTTTCAAGGAGACGCAATCTC...CTTAGTTGTGTGAGTAATTTGTGTGTGTGTGTGTGTGTAATACAGATCACATAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| 3UTR CCA 72 bp | AGCTTCAGGGAATTTAGAGGTCAAGTGGGGTGGGTGTaGGGTAAGGACATGGGGACATCCACGTGGAGACAG | + |
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Preference number: 3 (lower is better) Translates to: SFREFRGQVGWV*GKDMGTSTWRQ Trigger: CTGTCTCCACGTGGATGTCCCCATGTCCTTACCCCACACCCACCCCACTTGACCTCTAAATTCCCTGAAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| 3UTR GCA 72 bp | TTCCTTACTGGCTTGCCTCCCCTGGCTTACTCAGCCTaGTCTCTTATAGAACCCAAAACTACCAGCCCAGAG | + |
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Preference number: 3 (lower is better) Translates to: FLTGLPPLAYSA*SLIEPKTTSPE Trigger: CTCTGGGCTGGTAGTTTTGGGTTCTATAAGAGAGCAGGCTGAGTAAGCCAGGGGAGGCAAGCCAGTAAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| 3UTR TCA 72 bp | AGCACTCATGAAAAGGGACCTAGCATGACTGCCCTCTaGAAGACCCAACAAGCAGCTGGAAGAGTCAGATGT | + |
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Preference number: 3 (lower is better) Translates to: STHEKGPSMTAL*KTQQAAGRVRC Trigger: ACATCTGACTCTTCCAGCTGCTTGTTGGGTCTTTCAGAGGGCAGTCATGCTAGGTCCCTTTTCATGAGTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| 3UTR-3UTR CAA 90 bp | TCATCACCAAGGAAGTCAGGACTGGAACTCAAGCAGGTCAGGAAGCAGGAGCTGGGGGGTCTTATCTTCTaGGGTCTTGAAACTTTTGTT | + |
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Preference number: 3 (lower is better) Translates to: SSPRKSGLELKQVRKQELGGLIF*GLETFV Trigger: AACAAAAGTTTCAAGACCCAAGAAGATAAGACCCCC...CAGCTCCTGCTTCCTGACCTGCTTGAGTTCCAGTCCTGACTTCCTTGGTGATGA 49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| 3UTR GCA 72 bp | GAGAGGGAAGGGTTTATTCAGCTTACACTTCCACATTaGTGTTCATCACCAAGGAAGTCAGGACTGGAACTC | + |
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Preference number: 3 (lower is better) Translates to: EREGFIQLTLPH*CSSPRKSGLEL Trigger: GAGTTCCAGTCCTGACTTCCTTGGTGATGAACAGCAATGTGGAAGTGTAAGCTGAATAAACCCTTCCCTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| 3UTR GCA 72 bp | AAGCTTGGGCCTTGTCTTAGGCAGGGTTTCTATTCCTaGACAAACATCATGACCAAGAAGCAAATTGGAGAG | + |
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Preference number: 3 (lower is better) Translates to: KLGPCLRQGFYS*TNIMTKKQIGE Trigger: CTCTCCAATTTGCTTCTTGGTCATGATGTTTGTGCAGGAATAGAAACCCTGCCTAAGACAAGGCCCAAGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| 3UTR TCA 72 bp | GTCTTAGGCAGGGTTTCTATTCCTGCACAAACATCATaGCCAAGAAGCAAATTGGAGAGGGAAGGGTTTATT | + |
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Preference number: 3 (lower is better) Translates to: VLGRVSIPAQTS*PRSKLEREGFI Trigger: AATAAACCCTTCCCTCTCCAATTTGCTTCTTGGTCATGATGTTTGTGCAGGAATAGAAACCCTGCCTAAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| 3UTR CCA 72 bp | CTATTCCTGCACAAACATCATGACCAAGAAGCAAATTaGAGAGGGAAGGGTTTATTCAGCTTACACTTCCAC | + |
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Preference number: 3 (lower is better) Translates to: LFLHKHHDQEAN*RGKGLFSLHFH Trigger: GTGGAAGTGTAAGCTGAATAAACCCTTCCCTCTCCAATTTGCTTCTTGGTCATGATGTTTGTGCAGGAATAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| 3UTR-3UTR CAA 90 bp | CAAATTGGAGAGGGAAGGGTTTATTCAGCTTACACTTCCACATTGCTGTTCATCATAGAGGACTTTGCTTaGAGATTGCGTCTCCTTGAA | + |
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Preference number: 3 (lower is better) Translates to: QIGEGRVYSAYTSTLLFIIEDFA*RLRLLE Trigger: TTCAAGGAGACGCAATCTCAAAGCAAAGTCCTCTAT...GATGAACAGCAATGTGGAAGTGTAAGCTGAATAAACCCTTCCCTCTCCAATTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| 3UTR CCA 72 bp | TATACACAGTCCTCATGGCTGGGGGTCTTATCTTCTTaGGTCTTGAAACTTTTGTTGACTATATACTGCCTT | + |
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Preference number: 3 (lower is better) Translates to: YTQSSWLGVLSS*VLKLLLTIYCL Trigger: AAGGCAGTATATAGTCAACAAAAGTTTCAAGACCCAAGAAGATAAGACCCCCAGCCATGAGGACTGTGTATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| 3UTR CCA 72 bp | TGGGTACTTAAAGGAAGAAACCACAACTCAAGAAGGTaGGAAGGGAGTTGTTGGAAAATACCAAAAATACCA | + |
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Preference number: 3 (lower is better) Translates to: WVLKGRNHNSRR*EGSCWKIPKIP Trigger: TGGTATTTTTGGTATTTTCCAACAACTCCCTTCCCACCTTCTTGAGTTGTGGTTTCTTCCTTTAAGTACCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| 3UTR TCA 72 bp | AAGCAGATGGGTAGAGGAATGTTGATATCTGTTTTATaGTTAGCATACCTTTACAAAGGCCACATTCCCAAG | + |
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Preference number: 3 (lower is better) Translates to: KQMGRGMLISVL*LAYLYKGHIPK Trigger: CTTGGGAATGTGGCCTTTGTAAAGGTATGCTAATCATAAAACAGATATCAACATTCCTCTACCCATCTGCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| 3UTR CCA 72 bp | TACTTTGTTATACTTTCAATACTATTACTGAGGTTATaGAGCACTCATGAAAAGGGACCTAGCATGACTGCC | + |
|
Preference number: 3 (lower is better) Translates to: YFVILSILLLRL*STHEKGPSMTA Trigger: GGCAGTCATGCTAGGTCCCTTTTCATGAGTGCTCCATAACCTCAGTAATAGTATTGAAAGTATAACAAAGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| 3UTR TCA 72 bp | GAGAATAGAGGACTTTGCTTTGAGATTGCGTCTCCTTaGAACAATGGAAACTATATCCATATAGTCTCAACA | + |
|
Preference number: 3 (lower is better) Translates to: ENRGLCFEIASP*NNGNYIHIVST Trigger: TGTTGAGACTATATGGATATAGTTTCCATTGTTTCAAGGAGACGCAATCTCAAAGCAAAGTCCTCTATTCTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| 3UTR GCA 72 bp | TCTTCTTGGGTCTTGAAACTTTTGTTGACTATATACTaGCTTGTTATCTTGCTGTGTTGCTCACATTTATTC | + |
|
Preference number: 3 (lower is better) Translates to: SSWVLKLLLTIY*LVILLCCSHLF Trigger: GAATAAATGTGAGCAACACAGCAAGATAACAAGGCAGTATATAGTCAACAAAAGTTTCAAGACCCAAGAAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| CDS-3UTR TCA 90 bp | GTCAGGACTGGAACTCAAGCAGGTCAGGAAGCAGGAGCTGATGCAGAGGCCACAGGCTGCTCACTAAGGTaGCTGCCCCTAATAGTAATA | + |
|
Preference number: 4 (lower is better) Translates to: VRTGTQAGQEAGADAEATGCSLR*LPLIVI Trigger: TATTACTATTAGGGGCAGTCACCTTAGTGAGCAGCC...TGTGGCCTCTGCATCAGCTCCTGCTTCCTGACCTGCTTGAGTTCCAGTCCTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| CDS-3UTR GCA 90 bp | GTCAGGACTGGAACTCAAGCAGGTCAGGAAGCAGGAGCTGATGCAGAGGCCACAGTTGCCACAGAGAATTaGAAGATAGCAAAGCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VRTGTQAGQEAGADAEATVATEN*KIAKQE Trigger: TTCTTGCTTTGCTATCTTGCAATTCTCTGTGGCAAC...TGTGGCCTCTGCATCAGCTCCTGCTTCCTGACCTGCTTGAGTTCCAGTCCTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| CDS-3UTR CCA 90 bp | CAGTCCTCATGGCTGGGGGTCTTATCTTCTTGGGTCTTGAAACTTTTGTTGACTGGCCCTCTGATGACCTaGTCCTCAGGATGGACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: QSSWLGVLSSWVLKLLLTGPLMT*SSGWTK Trigger: TTTTGTCCATCCTGAGGACCAGGTCATCAGAGGGCC...AGTCAACAAAAGTTTCAAGACCCAAGAAGATAAGACCCCCAGCCATGAGGACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| CDS-3UTR GCA 90 bp | CTCTCTTATAGAACCCAAAACTACCAGCCCAGAGATGGTCCCACCCACAAGGGGGTTGCCACAGAGAATTaGAAGATAGCAAAGCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LSYRTQNYQPRDGPTHKGVATEN*KIAKQE Trigger: TTCTTGCTTTGCTATCTTGCAATTCTCTGTGGCAAC...CCCCTTGTGGGTGGGACCATCTCTGGGCTGGTAGTTTTGGGTTCTATAAGAGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| CDS-3UTR TCA 90 bp | CAGTCCTCATGGCTGGGGGTCTTATCTTCTTGGGTCTTGAAACTTTTGTTGACTTACAACGGTGATATGTaGGCCACAGGTAGAAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QSSWLGVLSSWVLKLLLTYNGDM*ATGRKS Trigger: GCTCTTTCTACCTGTGGCTCACATATCACCGTTGTA...AGTCAACAAAAGTTTCAAGACCCAAGAAGATAAGACCCCCAGCCATGAGGACTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| CDS-3UTR CCA 90 bp | CTCTCTTATAGAACCCAAAACTACCAGCCCAGAGATGGTCCCACCCACAAGGGGGAGAAAATAATACATTaGCTGCTCACTAAGGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: LSYRTQNYQPRDGPTHKGEKIIH*LLTKVT Trigger: AGTCACCTTAGTGAGCAGCCAATGTATTATTTTCTC...CCCCTTGTGGGTGGGACCATCTCTGGGCTGGTAGTTTTGGGTTCTATAAGAGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| CDS-3UTR CCA 90 bp | AAATTGGAGAGGGAAGGGTTTATTCAGCTTACACTTCCACATTGCTGTTCATCAGGCCCTCTGATGACCTaGTCCTCAGGATGGACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: KLEREGFIQLTLPHCCSSGPLMT*SSGWTK Trigger: TTTTGTCCATCCTGAGGACCAGGTCATCAGAGGGCC...TGATGAACAGCAATGTGGAAGTGTAAGCTGAATAAACCCTTCCCTCTCCAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| CDS-3UTR TCA 90 bp | CAAATTGGAGAGGGAAGGGTTTATTCAGCTTACACTTCCACATTGCTGTTCATCTACAACGGTGATATGTaGGCCACAGGTAGAAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QIGEGRVYSAYTSTLLFIYNGDM*ATGRKS Trigger: GCTCTTTCTACCTGTGGCTCACATATCACCGTTGTA...GATGAACAGCAATGTGGAAGTGTAAGCTGAATAAACCCTTCCCTCTCCAATTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| CDS-3UTR TCA 90 bp | AAATTGGAGAGGGAAGGGTTTATTCAGCTTACACTTCCACATTGCTGTTCATCAGGCTGCTCACTAAGGTaGCTGCCCCTAATAGTAATA | + |
|
Preference number: 4 (lower is better) Translates to: KLEREGFIQLTLPHCCSSGCSLR*LPLIVI Trigger: TATTACTATTAGGGGCAGTCACCTTAGTGAGCAGCC...TGATGAACAGCAATGTGGAAGTGTAAGCTGAATAAACCCTTCCCTCTCCAATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| CDS-3UTR GCA 90 bp | ATTCAGCTTACACTTCCACATTGCTGTTCATCACCAAGGAAGTCAGGACTGGAAAAAACATCTGGGCTATaGAGCCATTGTAGGAGATTG | + |
|
Preference number: 4 (lower is better) Translates to: IQLTLPHCCSSPRKSGLEKTSGL*SHCRRL Trigger: CAATCTCCTACAATGGCTGCATAGCCCAGATGTTTT...TTCCAGTCCTGACTTCCTTGGTGATGAACAGCAATGTGGAAGTGTAAGCTGAAT 43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| CDS-3UTR GCA 90 bp | TACACAGTCCTCATGGCTGGGGGTCTTATCTTCTTGGGTCTTGAAACTTTTGTTAAAACATCTGGGCTATaGAGCCATTGTAGGAGATTG | + |
|
Preference number: 4 (lower is better) Translates to: YTVLMAGGLIFLGLETFVKTSGL*SHCRRL Trigger: CAATCTCCTACAATGGCTGCATAGCCCAGATGTTTT...AACAAAAGTTTCAAGACCCAAGAAGATAAGACCCCCAGCCATGAGGACTGTGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| 3UTR CAA 72 bp | CAGTCCTCATGGCTGGGGGTCTTATCTTCTTGGGTCTaGAAACTTTTGTTGACTATATACTGCCTTGTTATC | + |
|
Preference number: 4 (lower is better) Translates to: QSSWLGVLSSWV*KLLLTIYCLVI Trigger: GATAACAAGGCAGTATATAGTCAACAAAAGTTTCAAGACCCAAGAAGATAAGACCCCCAGCCATGAGGACTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| 3UTR CAA 72 bp | CTGGGGGTCTTATCTTCTTGGGTCTTGAAACTTTTGTaGACTATATACTGCCTTGTTATCTTGCTGTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LGVLSSWVLKLL*TIYCLVILLCC Trigger: GCAACACAGCAAGATAACAAGGCAGTATATAGTCAACAAAAGTTTCAAGACCCAAGAAGATAAGACCCCCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| 3UTR CAA 72 bp | TGGCTGGGGGTCTTATCTTCTTGGGTCTTGAAACTTTaGTTGACTATATACTGCCTTGTTATCTTGCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: WLGVLSSWVLKL*LTIYCLVILLC Trigger: ACACAGCAAGATAACAAGGCAGTATATAGTCAACAAAAGTTTCAAGACCCAAGAAGATAAGACCCCCAGCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| 3UTR CAA 72 bp | ATATACACAGTCCTCATGGCTGGGGGTCTTATCTTCTaGGGTCTTGAAACTTTTGTTGACTATATACTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: IYTVLMAGGLIF*GLETFVDYILP Trigger: AGGCAGTATATAGTCAACAAAAGTTTCAAGACCCAAGAAGATAAGACCCCCAGCCATGAGGACTGTGTATAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| CDS-3UTR CCA 90 bp | ATTCAGCTTACACTTCCACATTGCTGTTCATCACCAAGGAAGTCAGGACTGGAAGAGAAAATAATACATTaGCTGCTCACTAAGGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: IQLTLPHCCSSPRKSGLEEKIIH*LLTKVT Trigger: AGTCACCTTAGTGAGCAGCCAATGTATTATTTTCTC...TTCCAGTCCTGACTTCCTTGGTGATGAACAGCAATGTGGAAGTGTAAGCTGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| 3UTR CAA 72 bp | ACTCAGAACCAGAGAATAGAGGACTTTGCTTTGAGATaGCGTCTCCTTGAAACAATGGAAACTATATCCATA | + |
|
Preference number: 4 (lower is better) Translates to: TQNQRIEDFALR*RLLETMETISI Trigger: TATGGATATAGTTTCCATTGTTTCAAGGAGACGCAATCTCAAAGCAAAGTCCTCTATTCTCTGGTTCTGAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| 3UTR CAA 72 bp | GAAAAGACTCAGAACCAGAGAATAGAGGACTTTGCTTaGAGATTGCGTCTCCTTGAAACAATGGAAACTATA | + |
|
Preference number: 4 (lower is better) Translates to: EKTQNQRIEDFA*RLRLLETMETI Trigger: TATAGTTTCCATTGTTTCAAGGAGACGCAATCTCAAAGCAAAGTCCTCTATTCTCTGGTTCTGAGTCTTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| CDS CCA 90 bp | GTAAAACAGAGCAAACACCTTGTCGTCCCCAACAGAATCACCCACTaGGACATAGGTAAAGATGAGTGGCAAGAAGAACATGAATACAAC | + |
|
Preference number: 5 (lower is better) Translates to: VKQSKHLVVPNRITH*DIGKDEWQEEHEYN Trigger: GTTGTATTCATGTTCTTCTTGCCACTCATCTTTACCTATGTCCCAGTGGGTGATTCTGTTGGGGACGACAAGGTGTTTGCTCTGTTTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099814.2 ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| CDS-3UTR CAA 90 bp | TCTCATGAAGGCATTTCCTCAACTGAAGCTCCTTTCTCTGTGATAACTCCAGCTTTCAAACAGTTTGTCTaGGCACCACACCTTCCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: SHEGISSTEAPFSVITPAFKQFV*APHLPH Trigger: ATGAGGAAGGTGTGGTGCCAAGACAAACTGTTTGAA...AGCTGGAGTTATCACAGAGAAAGGAGCTTCAGTTGAGGAAATGCCTTCATGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| CDS-3UTR CAA 90 bp | ATTCAGCTTACACTTCCACATTGCTGTTCATCACCAAGGAAGTCAGGACTGGAATTCAAACAGTTTGTCTaGGCACCACACCTTCCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: IQLTLPHCCSSPRKSGLEFKQFV*APHLPH Trigger: ATGAGGAAGGTGTGGTGCCAAGACAAACTGTTTGAA...TTCCAGTCCTGACTTCCTTGGTGATGAACAGCAATGTGGAAGTGTAAGCTGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| CDS-3UTR CAA 90 bp | ATCATGACCAAGAAGCAAATTGGAGAGGGAAGGGTTTATTCAGCTTACACTTCCGGTTGCCACAGAGAATaGCAAGATAGCAAAGCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: IMTKKQIGEGRVYSAYTSGCHRE*QDSKAR Trigger: TCTTGCTTTGCTATCTTGCAATTCTCTGTGGCAACC...GGAAGTGTAAGCTGAATAAACCCTTCCCTCTCCAATTTGCTTCTTGGTCATGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| CDS-3UTR CAA 90 bp | ATATGTGATCTGTATTACACACACACACACACACAAATTACTCACACAACTAAGGGTTGCCACAGAGAATaGCAAGATAGCAAAGCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: ICDLYYTHTHTQITHTTKGCHRE*QDSKAR Trigger: TCTTGCTTTGCTATCTTGCAATTCTCTGTGGCAACC...CTTAGTTGTGTGAGTAATTTGTGTGTGTGTGTGTGTGTAATACAGATCACATAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| CDS CCA 72 bp | AGCAAACACCTTGTCGTCCCCAACAGAATCACCCACTaGGACATAGGTAAAGATGAGTGGCAAGAAGAACAT | + |
|
Preference number: 6 (lower is better) Translates to: SKHLVVPNRITH*DIGKDEWQEEH Trigger: ATGTTCTTCTTGCCACTCATCTTTACCTATGTCCCAGTGGGTGATTCTGTTGGGGACGACAAGGTGTTTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099814.2 ENSMUST00000215179.3 ENSMUST00000215529.3 |
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| CDS GCA 72 bp | AATAGTAATAAGAACAACCAGGTTGCCACAGAGAATTaGAAGATAGCAAAGCAAGAACAACACAGCACACAT | + |
|
Preference number: 6 (lower is better) Translates to: NSNKNNQVATEN*KIAKQEQHSTH Trigger: ATGTGTGCTGTGTTGTTCTTGCTTTGCTATCTTGCAATTCTCTGTGGCAACCTGGTTGTTCTTATTACTATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099814.2 ENSMUST00000215179.3 ENSMUST00000215529.3 |
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