Pregenerated sensors for OLFR1196 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075120Ensembl transcript IDs: ENSMUST00000104892.2, ENSMUST00000216928.2, ENSMUST00000216977.2
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTATATGCCCCAGTACAGGGGAATGCCAGTGTCAAGAAGCAGGAGTaGCTATTTATCAGAGCATGGCAGAGGGAAGGTAGTGGGAACTTT | + |
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Preference number: 1 (lower is better) Translates to: LYAPVQGNASVKKQE*LFIRAWQREGSGNF Trigger: AAAGTTCCCACTACCTTCCCTCTGCCATGCTCTGATAAATAGCCACTCCTGCTTCTTGACACTGGCATTCCCCTGTACTGGGGCATATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000216928.2 ENSMUST00000216977.2 |
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| 3UTR TCA 90 bp | GTCCTCTATCAAACCAAGAAAATTCTTGCAGCCTTTCCACCCATCTaGTCATCTCTGGATACACTTGTACTCTATAGATTAGACAGAGCA | + |
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Preference number: 1 (lower is better) Translates to: VLYQTKKILAAFPPI*SSLDTLVLYRLDRA Trigger: TGCTCTGTCTAATCTATAGAGTACAAGTGTATCCAGAGATGATCAGATGGGTGGAAAGGCTGCAAGAATTTTCTTGGTTTGATAGAGGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216928.2 ENSMUST00000216977.2 |
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| 3UTR TCA 90 bp | CAAGGTACAATAAGACTAGGCACAAACACTCATATCAAGTCTGCATaGGACCACCCAGATGGAGAAAAGCTATCCCAAGAGTTGATAAAA | + |
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Preference number: 1 (lower is better) Translates to: QGTIRLGTNTHIKSA*DHPDGEKLSQELIK Trigger: TTTTATCAACTCTTGGGATAGCTTTTCTCCATCTGGGTGGTCTCATGCAGACTTGATATGAGTGTTTGTGCCTAGTCTTATTGTACCTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216928.2 ENSMUST00000216977.2 |
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| 3UTR-3UTR TCA 90 bp | AACACACGGCCCCCAATGGAGAAGCAAGAGAAAGCACCCAAGGAGCTGAAGGTACTGCTCTGTAAGAGGTaGGAAGAGGAAGGTAAGAAA | + |
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Preference number: 2 (lower is better) Translates to: NTRPPMEKQEKAPKELKVLLCKR*EEEGKK Trigger: TTTCTTACCTTCCTCTTCTCACCTCTTACAGAGCAG...TACCTTCAGCTCCTTGGGTGCTTTCTCTTGCTTCTCCATTGGGGGCCGTGTGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000216928.2 ENSMUST00000216977.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGGCCTCCCAGGGCTATCCACAGAACATGGCTTAACAAGGTACAATAAGACTGCCTTTCCACCCATCTaGTCATCTCTGGATACACTT | + |
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Preference number: 2 (lower is better) Translates to: AGLPGLSTEHGLTRYNKTAFPPI*SSLDTL Trigger: AAGTGTATCCAGAGATGATCAGATGGGTGGAAAGGC...AGTCTTATTGTACCTTGTTAAGCCATGTTCTGTGGATAGCCCTGGGAGGCCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216928.2 ENSMUST00000216977.2 |
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| 3UTR-3UTR CCA 90 bp | GCAGGCCTCCCAGGGCTATCCACAGAACATGGCTTAACAAGGTACAATAAGACTATGAGACCACCCAGATaGAGAAAAGCTATCCCAAGA | + |
|
Preference number: 2 (lower is better) Translates to: AGLPGLSTEHGLTRYNKTMRPPR*RKAIPR Trigger: TCTTGGGATAGCTTTTCTCCATCTGGGTGGTCTCAT...AGTCTTATTGTACCTTGTTAAGCCATGTTCTGTGGATAGCCCTGGGAGGCCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216928.2 ENSMUST00000216977.2 |
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| 3UTR-3UTR CCA 90 bp | AACACACGGCCCCCAATGGAGAAGCAAGAGAAAGCACCCAAGGAGCTGAAGGTAATATGTAGCAGAAGATaGCCTAGTCAGCCATTAATG | + |
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Preference number: 2 (lower is better) Translates to: NTRPPMEKQEKAPKELKVICSRR*PSQPLM Trigger: CATTAATGGCTGACTAGGCCATCTTCTGCTACATAT...TACCTTCAGCTCCTTGGGTGCTTTCTCTTGCTTCTCCATTGGGGGCCGTGTGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000216928.2 ENSMUST00000216977.2 |
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| 3UTR-3UTR TCA 90 bp | GGTATATATGAGGCATGGACGCTCAATGACAGTCACAAGAGCAAGCTAGGCAAGCTGCTCTGTAAGAGGTaGGAAGAGGAAGGTAAGAAA | + |
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Preference number: 2 (lower is better) Translates to: GIYEAWTLNDSHKSKLGKLLCKR*EEEGKK Trigger: TTTCTTACCTTCCTCTTCTCACCTCTTACAGAGCAG...CTTGCCTAGCTTGCTCTTGTGACTGTCATTGAGCGTCCATGCCTCATATATACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216928.2 ENSMUST00000216977.2 |
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| 3UTR-3UTR TCA 90 bp | AACACACGGCCCCCAATGGAGAAGCAAGAGAAAGCACCCAAGGAGCTGAAGGTATTGTGTTTAGTTTGTTaGTTTGCCACCAGAATCTTC | + |
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Preference number: 2 (lower is better) Translates to: NTRPPMEKQEKAPKELKVLCLVC*FATRIF Trigger: GAAGATTCTGGTGGCAAATCAACAAACTAAACACAA...TACCTTCAGCTCCTTGGGTGCTTTCTCTTGCTTCTCCATTGGGGGCCGTGTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000216928.2 ENSMUST00000216977.2 |
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| 3UTR-3UTR GCA 90 bp | AACACACGGCCCCCAATGGAGAAGCAAGAGAAAGCACCCAAGGAGCTGAAGGTATTTAGTTTGTTGATTTaGCACCAGAATCTTCCTGGA | + |
|
Preference number: 2 (lower is better) Translates to: NTRPPMEKQEKAPKELKVFSLLI*HQNLPG Trigger: TCCAGGAAGATTCTGGTGGCAAATCAACAAACTAAA...TACCTTCAGCTCCTTGGGTGCTTTCTCTTGCTTCTCCATTGGGGGCCGTGTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000216928.2 ENSMUST00000216977.2 |
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| 3UTR-3UTR GCA 90 bp | GGTATATATGAGGCATGGACGCTCAATGACAGTCACAAGAGCAAGCTAGGCAAGAACCAAGAAAATTCTTaGAGCCTTTCCACCCATCTG | + |
|
Preference number: 2 (lower is better) Translates to: GIYEAWTLNDSHKSKLGKNQENS*SLSTHL Trigger: CAGATGGGTGGAAAGGCTGCAAGAATTTTCTTGGTT...CTTGCCTAGCTTGCTCTTGTGACTGTCATTGAGCGTCCATGCCTCATATATACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216928.2 ENSMUST00000216977.2 |
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| 3UTR CAA 90 bp | TGTTTGGTTGGTTGGTTGGTTGGTTGGTGGTTGGTTGTGTTTAGTTaGTTGATTTGCCACCAGAATCTTCCTGGAGAAGGTAAACTGAGG | + |
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Preference number: 2 (lower is better) Translates to: CLVGWLVGWWLVVFS*LICHQNLPGEGKLR Trigger: CCTCAGTTTACCTTCTCCAGGAAGATTCTGGTGGCAAATCAACAAACTAAACACAACCAACCACCAACCAACCAACCAACCAACCAAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216928.2 ENSMUST00000216977.2 |
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| 3UTR-3UTR TCA 90 bp | GGTATATATGAGGCATGGACGCTCAATGACAGTCACAAGAGCAAGCTAGGCAAGTTACCCCAAACAGTTTaGATTTTCTGTGACCTGTCA | + |
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Preference number: 2 (lower is better) Translates to: GIYEAWTLNDSHKSKLGKLPQTV*IFCDLS Trigger: TGACAGGTCACAGAAAATTCAAACTGTTTGGGGTAA...CTTGCCTAGCTTGCTCTTGTGACTGTCATTGAGCGTCCATGCCTCATATATACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000216928.2 ENSMUST00000216977.2 |
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| 3UTR-3UTR GCA 90 bp | TATGAACTCACCAGTACCCCAAGAGCTCATATCTCTAGCTGTATATGTAGCAGACACTCATATCAAGTCTaGATGAGACCACCCAGATGG | + |
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Preference number: 2 (lower is better) Translates to: YELTSTPRAHISSCICSRHSYQV*MRPPRW Trigger: CCATCTGGGTGGTCTCATGCAGACTTGATATGAGTG...TCTGCTACATATACAGCTAGAGATATGAGCTCTTGGGGTACTGGTGAGTTCATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216928.2 ENSMUST00000216977.2 |
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| 3UTR-3UTR CCA 90 bp | TATGAACTCACCAGTACCCCAAGAGCTCATATCTCTAGCTGTATATGTAGCAGAGTCAAGAAGCAGGAGTaGCTATTTATCAGAGCATGG | + |
|
Preference number: 2 (lower is better) Translates to: YELTSTPRAHISSCICSRVKKQE*LFIRAW Trigger: CCATGCTCTGATAAATAGCCACTCCTGCTTCTTGAC...TCTGCTACATATACAGCTAGAGATATGAGCTCTTGGGGTACTGGTGAGTTCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216928.2 ENSMUST00000216977.2 |
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| 3UTR-3UTR TCA 90 bp | TATGAACTCACCAGTACCCCAAGAGCTCATATCTCTAGCTGTATATGTAGCAGAAGCAGCATTGGATATTaGGGGAATTTGGGTATTCTG | + |
|
Preference number: 2 (lower is better) Translates to: YELTSTPRAHISSCICSRSSIGY*GNLGIL Trigger: CAGAATACCCAAATTCCCTCAATATCCAATGCTGCT...TCTGCTACATATACAGCTAGAGATATGAGCTCTTGGGGTACTGGTGAGTTCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000216928.2 ENSMUST00000216977.2 |
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| 3UTR-3UTR TCA 90 bp | TATGAACTCACCAGTACCCCAAGAGCTCATATCTCTAGCTGTATATGTAGCAGATTACCCCAAACAGTTTaGATTTTCTGTGACCTGTCA | + |
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Preference number: 2 (lower is better) Translates to: YELTSTPRAHISSCICSRLPQTV*IFCDLS Trigger: TGACAGGTCACAGAAAATTCAAACTGTTTGGGGTAA...TCTGCTACATATACAGCTAGAGATATGAGCTCTTGGGGTACTGGTGAGTTCATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000216928.2 ENSMUST00000216977.2 |
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| 3UTR-3UTR TCA 90 bp | TATGAACTCACCAGTACCCCAAGAGCTCATATCTCTAGCTGTATATGTAGCAGATTGTGTTTAGTTTGTTaGTTTGCCACCAGAATCTTC | + |
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Preference number: 2 (lower is better) Translates to: YELTSTPRAHISSCICSRLCLVC*FATRIF Trigger: GAAGATTCTGGTGGCAAATCAACAAACTAAACACAA...TCTGCTACATATACAGCTAGAGATATGAGCTCTTGGGGTACTGGTGAGTTCATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216928.2 ENSMUST00000216977.2 |
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| 3UTR-3UTR CCA 90 bp | TCCTCTATCAAACCAAGAAAATTCTTGCAGCCTTTCCACCCATCTGATCATCTCACTAAGTTGTTCCTTTaGCTCATAACTTTACCCCAA | + |
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Preference number: 2 (lower is better) Translates to: SSIKPRKFLQPFHPSDHLTKLFL*LITLPQ Trigger: TTGGGGTAAAGTTATGAGCCAAAGGAACAACTTAGT...GAGATGATCAGATGGGTGGAAAGGCTGCAAGAATTTTCTTGGTTTGATAGAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000216928.2 ENSMUST00000216977.2 |
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| 3UTR-3UTR CCA 90 bp | TATGAACTCACCAGTACCCCAAGAGCTCATATCTCTAGCTGTATATGTAGCAGAACTAAGTTGTTCCTTTaGCTCATAACTTTACCCCAA | + |
|
Preference number: 2 (lower is better) Translates to: YELTSTPRAHISSCICSRTKLFL*LITLPQ Trigger: TTGGGGTAAAGTTATGAGCCAAAGGAACAACTTAGT...TCTGCTACATATACAGCTAGAGATATGAGCTCTTGGGGTACTGGTGAGTTCATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000216928.2 ENSMUST00000216977.2 |
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| 3UTR-3UTR GCA 90 bp | TATGAACTCACCAGTACCCCAAGAGCTCATATCTCTAGCTGTATATGTAGCAGAAGCTTAGTGGTATACTaGATGTTGAGTGTACTTAAA | + |
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Preference number: 2 (lower is better) Translates to: YELTSTPRAHISSCICSRSLVVY*MLSVLK Trigger: TTTAAGTACACTCAACATGCAGTATACCACTAAGCT...TCTGCTACATATACAGCTAGAGATATGAGCTCTTGGGGTACTGGTGAGTTCATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216928.2 ENSMUST00000216977.2 |
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| 3UTR-3UTR CAA 90 bp | AACACACGGCCCCCAATGGAGAAGCAAGAGAAAGCACCCAAGGAGCTGAAGGTAATGTGTGTGCTAGGGTaGCTAGGAAAGGATCCTAGG | + |
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Preference number: 3 (lower is better) Translates to: NTRPPMEKQEKAPKELKVMCVLG*LGKDPR Trigger: CCTAGGATCCTTTCCTAGCAACCCTAGCACACACAT...TACCTTCAGCTCCTTGGGTGCTTTCTCTTGCTTCTCCATTGGGGGCCGTGTGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000216928.2 ENSMUST00000216977.2 |
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| 3UTR CCA 72 bp | CCAGTACAGGGGAATGCCAGTGTCAAGAAGCAGGAGTaGCTATTTATCAGAGCATGGCAGAGGGAAGGTAGT | + |
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Preference number: 3 (lower is better) Translates to: PVQGNASVKKQE*LFIRAWQREGS Trigger: ACTACCTTCCCTCTGCCATGCTCTGATAAATAGCCACTCCTGCTTCTTGACACTGGCATTCCCCTGTACTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216928.2 ENSMUST00000216977.2 |
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| 3UTR-3UTR CAA 90 bp | AACACACGGCCCCCAATGGAGAAGCAAGAGAAAGCACCCAAGGAGCTGAAGGTATGCTTGCTTGCTTGCTaGCTTGCTTGGTTAGTTGTT | + |
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Preference number: 3 (lower is better) Translates to: NTRPPMEKQEKAPKELKVCLLAC*LAWLVV Trigger: AACAACTAACCAAGCAAGCAAGCAAGCAAGCAAGCA...TACCTTCAGCTCCTTGGGTGCTTTCTCTTGCTTCTCCATTGGGGGCCGTGTGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000216928.2 ENSMUST00000216977.2 |
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| 3UTR GCA 72 bp | TGGGAAGAGAGGCCCCTTGGTATTGCAAACTTTATATaGCCCAGTACAGGGGAATGCCAGTGTCAAGAAGCA | + |
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Preference number: 3 (lower is better) Translates to: WEERPLGIANFI*PSTGECQCQEA Trigger: TGCTTCTTGACACTGGCATTCCCCTGTACTGGGGCATATAAAGTTTGCAATACCAAGGGGCCTCTCTTCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000216928.2 ENSMUST00000216977.2 |
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| 3UTR-3UTR CAA 90 bp | AACACACGGCCCCCAATGGAGAAGCAAGAGAAAGCACCCAAGGAGCTGAAGGTAAGACAGAGCACTAAGTaGTTCCTTTGGCTCATAACT | + |
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Preference number: 3 (lower is better) Translates to: NTRPPMEKQEKAPKELKVRQSTK*FLWLIT Trigger: AGTTATGAGCCAAAGGAACAACTTAGTGCTCTGTCT...TACCTTCAGCTCCTTGGGTGCTTTCTCTTGCTTCTCCATTGGGGGCCGTGTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000216928.2 ENSMUST00000216977.2 |
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| 3UTR-3UTR CAA 90 bp | GGTATATATGAGGCATGGACGCTCAATGACAGTCACAAGAGCAAGCTAGGCAAGATGTGTGTGCTAGGGTaGCTAGGAAAGGATCCTAGG | + |
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Preference number: 3 (lower is better) Translates to: GIYEAWTLNDSHKSKLGKMCVLG*LGKDPR Trigger: CCTAGGATCCTTTCCTAGCAACCCTAGCACACACAT...CTTGCCTAGCTTGCTCTTGTGACTGTCATTGAGCGTCCATGCCTCATATATACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216928.2 ENSMUST00000216977.2 |
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| 3UTR TCA 72 bp | CCCCAATGGAGAAGCAAGAGAAAGCACCCAAGGAGCTaGAGGTATCTGCAACCCTATAGGTGGAACAACAAT | + |
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Preference number: 3 (lower is better) Translates to: PQWRSKRKHPRS*RYLQPYRWNNN Trigger: ATTGTTGTTCCACCTATAGGGTTGCAGATACCTTCAGCTCCTTGGGTGCTTTCTCTTGCTTCTCCATTGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216928.2 ENSMUST00000216977.2 |
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| 3UTR-3UTR CAA 90 bp | AACACACGGCCCCCAATGGAGAAGCAAGAGAAAGCACCCAAGGAGCTGAAGGTATGCTTGCTTGCTTGCTaGGTTAGTTGTTTGTTTGTT | + |
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Preference number: 3 (lower is better) Translates to: NTRPPMEKQEKAPKELKVCLLAC*VSCLFV Trigger: AACAAACAAACAACTAACCAAGCAAGCAAGCAAGCA...TACCTTCAGCTCCTTGGGTGCTTTCTCTTGCTTCTCCATTGGGGGCCGTGTGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000216928.2 ENSMUST00000216977.2 |
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| 3UTR-3UTR CAA 90 bp | GCAGGCCTCCCAGGGCTATCCACAGAACATGGCTTAACAAGGTACAATAAGACTAAACCAAGAAAATTCTaGCAGCCTTTCCACCCATCT | + |
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Preference number: 3 (lower is better) Translates to: AGLPGLSTEHGLTRYNKTKPRKF*QPFHPS Trigger: AGATGGGTGGAAAGGCTGCAAGAATTTTCTTGGTTT...AGTCTTATTGTACCTTGTTAAGCCATGTTCTGTGGATAGCCCTGGGAGGCCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216928.2 ENSMUST00000216977.2 |
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| 3UTR-3UTR CAA 90 bp | AACACACGGCCCCCAATGGAGAAGCAAGAGAAAGCACCCAAGGAGCTGAAGGTATTGGTTGTGTTTAGTTaGTTGATTTGCCACCAGAAT | + |
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Preference number: 3 (lower is better) Translates to: NTRPPMEKQEKAPKELKVLVVFS*LICHQN Trigger: ATTCTGGTGGCAAATCAACAAACTAAACACAACCAA...TACCTTCAGCTCCTTGGGTGCTTTCTCTTGCTTCTCCATTGGGGGCCGTGTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000216928.2 ENSMUST00000216977.2 |
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| 3UTR-3UTR CAA 90 bp | AACACACGGCCCCCAATGGAGAAGCAAGAGAAAGCACCCAAGGAGCTGAAGGTAGTGGTATACTGCATGTaGAGTGTACTTAAAAGTCTT | + |
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Preference number: 3 (lower is better) Translates to: NTRPPMEKQEKAPKELKVVVYCM*SVLKSL Trigger: AAGACTTTTAAGTACACTCAACATGCAGTATACCAC...TACCTTCAGCTCCTTGGGTGCTTTCTCTTGCTTCTCCATTGGGGGCCGTGTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000216928.2 ENSMUST00000216977.2 |
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| 3UTR-3UTR CAA 90 bp | GCAGGCCTCCCAGGGCTATCCACAGAACATGGCTTAACAAGGTACAATAAGACTTGCTTGCTTGCTTGCTaGGTTAGTTGTTTGTTTGTT | + |
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Preference number: 3 (lower is better) Translates to: AGLPGLSTEHGLTRYNKTCLLAC*VSCLFV Trigger: AACAAACAAACAACTAACCAAGCAAGCAAGCAAGCA...AGTCTTATTGTACCTTGTTAAGCCATGTTCTGTGGATAGCCCTGGGAGGCCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216928.2 ENSMUST00000216977.2 |
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| 3UTR-3UTR CAA 90 bp | GCAGGCCTCCCAGGGCTATCCACAGAACATGGCTTAACAAGGTACAATAAGACTGTTGTGTTTAGTTTGTaGATTTGCCACCAGAATCTT | + |
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Preference number: 3 (lower is better) Translates to: AGLPGLSTEHGLTRYNKTVVFSL*ICHQNL Trigger: AAGATTCTGGTGGCAAATCAACAAACTAAACACAAC...AGTCTTATTGTACCTTGTTAAGCCATGTTCTGTGGATAGCCCTGGGAGGCCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216928.2 ENSMUST00000216977.2 |
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| 3UTR TCA 72 bp | ATAAGACTAGGCACAAACACTCATATCAAGTCTGCATaGGACCACCCAGATGGAGAAAAGCTATCCCAAGAG | + |
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Preference number: 3 (lower is better) Translates to: IRLGTNTHIKSA*DHPDGEKLSQE Trigger: CTCTTGGGATAGCTTTTCTCCATCTGGGTGGTCTCATGCAGACTTGATATGAGTGTTTGTGCCTAGTCTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216928.2 ENSMUST00000216977.2 |
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| 3UTR GCA 72 bp | GTTGGTTGGTGGTTGGTTGTGTTTAGTTTGTTGATTTaGCACCAGAATCTTCCTGGAGAAGGTAAACTGAGG | + |
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Preference number: 3 (lower is better) Translates to: VGWWLVVFSLLI*HQNLPGEGKLR Trigger: CCTCAGTTTACCTTCTCCAGGAAGATTCTGGTGGCAAATCAACAAACTAAACACAACCAACCACCAACCAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216928.2 ENSMUST00000216977.2 |
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| 3UTR GCA 72 bp | TACAATAAGACTAGGCACAAACACTCATATCAAGTCTaGATGAGACCACCCAGATGGAGAAAAGCTATCCCA | + |
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Preference number: 3 (lower is better) Translates to: YNKTRHKHSYQV*MRPPRWRKAIP Trigger: TGGGATAGCTTTTCTCCATCTGGGTGGTCTCATGCAGACTTGATATGAGTGTTTGTGCCTAGTCTTATTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216928.2 ENSMUST00000216977.2 |
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| 3UTR-3UTR CAA 90 bp | TATGAACTCACCAGTACCCCAAGAGCTCATATCTCTAGCTGTATATGTAGCAGAAGACAGAGCACTAAGTaGTTCCTTTGGCTCATAACT | + |
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Preference number: 3 (lower is better) Translates to: YELTSTPRAHISSCICSRRQSTK*FLWLIT Trigger: AGTTATGAGCCAAAGGAACAACTTAGTGCTCTGTCT...TCTGCTACATATACAGCTAGAGATATGAGCTCTTGGGGTACTGGTGAGTTCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216928.2 ENSMUST00000216977.2 |
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| 3UTR TCA 72 bp | CAAACCAAGAAAATTCTTGCAGCCTTTCCACCCATCTaGTCATCTCTGGATACACTTGTACTCTATAGATTA | + |
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Preference number: 3 (lower is better) Translates to: QTKKILAAFPPI*SSLDTLVLYRL Trigger: TAATCTATAGAGTACAAGTGTATCCAGAGATGATCAGATGGGTGGAAAGGCTGCAAGAATTTTCTTGGTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216928.2 ENSMUST00000216977.2 |
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| CDS-3UTR TCA 90 bp | AACACACGGCCCCCAATGGAGAAGCAAGAGAAAGCACCCAAGGAGCTGAAGGTACCAGCAAGTGGGAAGTaGAGAGCTGGGTCATGCACT | + |
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Preference number: 4 (lower is better) Translates to: NTRPPMEKQEKAPKELKVPASGK*RAGSCT Trigger: AGTGCATGACCCAGCTCTTCACTTCCCACTTGCTGG...TACCTTCAGCTCCTTGGGTGCTTTCTCTTGCTTCTCCATTGGGGGCCGTGTGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000216928.2 ENSMUST00000216977.2 |
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| CDS-3UTR TCA 90 bp | AACACACGGCCCCCAATGGAGAAGCAAGAGAAAGCACCCAAGGAGCTGAAGGTAGCGCTTCCCTGCAGATaGTCTTGTCCTCAGAGAATA | + |
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Preference number: 4 (lower is better) Translates to: NTRPPMEKQEKAPKELKVALPCR*SCPQRI Trigger: TATTCTCTGAGGACAAGATCATCTGCAGGGAAGCGC...TACCTTCAGCTCCTTGGGTGCTTTCTCTTGCTTCTCCATTGGGGGCCGTGTGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000216928.2 ENSMUST00000216977.2 |
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| CDS-3UTR GCA 90 bp | AACACACGGCCCCCAATGGAGAAGCAAGAGAAAGCACCCAAGGAGCTGAAGGTACGAGACCACACCTTGTaGATGGCACTTTTCATCTCA | + |
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Preference number: 4 (lower is better) Translates to: NTRPPMEKQEKAPKELKVRDHTL*MALFIS Trigger: TGAGATGAAAAGTGCCATGCACAAGGTGTGGTCTCG...TACCTTCAGCTCCTTGGGTGCTTTCTCTTGCTTCTCCATTGGGGGCCGTGTGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000216928.2 ENSMUST00000216977.2 |
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| CDS-3UTR CCA 90 bp | GGTATATATGAGGCATGGACGCTCAATGACAGTCACAAGAGCAAGCTAGGCAAGACACCTGCCAGCAAGTaGGAAGTGAAGAGCTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: GIYEAWTLNDSHKSKLGKTPASK*EVKSWV Trigger: GACCCAGCTCTTCACTTCCCACTTGCTGGCAGGTGT...CTTGCCTAGCTTGCTCTTGTGACTGTCATTGAGCGTCCATGCCTCATATATACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216928.2 ENSMUST00000216977.2 |
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| CDS-3UTR TCA 90 bp | GCAGGCCTCCCAGGGCTATCCACAGAACATGGCTTAACAAGGTACAATAAGACTCACTTACTTCAACTCTaGGTGACAGCCGAGACCACA | + |
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Preference number: 4 (lower is better) Translates to: AGLPGLSTEHGLTRYNKTHLLQL*VTAETT Trigger: TGTGGTCTCGGCTGTCACTCAGAGTTGAAGTAAGTG...AGTCTTATTGTACCTTGTTAAGCCATGTTCTGTGGATAGCCCTGGGAGGCCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216928.2 ENSMUST00000216977.2 |
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| CDS-3UTR CCA 90 bp | AACACACGGCCCCCAATGGAGAAGCAAGAGAAAGCACCCAAGGAGCTGAAGGTAGGTTGTTCTATTAGGTaGCTGCAGGTGATGGTGAAT | + |
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Preference number: 4 (lower is better) Translates to: NTRPPMEKQEKAPKELKVGCSIR*LQVMVN Trigger: ATTCACCATCACCTGCAGCCACCTAATAGAACAACC...TACCTTCAGCTCCTTGGGTGCTTTCTCTTGCTTCTCCATTGGGGGCCGTGTGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000216928.2 ENSMUST00000216977.2 |
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| CDS-3UTR TCA 90 bp | TCCTCTATCAAACCAAGAAAATTCTTGCAGCCTTTCCACCCATCTGATCATCTCCCAGCAAGTGGGAAGTaGAGAGCTGGGTCATGCACT | + |
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Preference number: 4 (lower is better) Translates to: SSIKPRKFLQPFHPSDHLPASGK*RAGSCT Trigger: AGTGCATGACCCAGCTCTTCACTTCCCACTTGCTGG...GAGATGATCAGATGGGTGGAAAGGCTGCAAGAATTTTCTTGGTTTGATAGAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216928.2 ENSMUST00000216977.2 |
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| CDS-3UTR GCA 90 bp | GGTATATATGAGGCATGGACGCTCAATGACAGTCACAAGAGCAAGCTAGGCAAGCGAGACCACACCTTGTaGATGGCACTTTTCATCTCA | + |
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Preference number: 4 (lower is better) Translates to: GIYEAWTLNDSHKSKLGKRDHTL*MALFIS Trigger: TGAGATGAAAAGTGCCATGCACAAGGTGTGGTCTCG...CTTGCCTAGCTTGCTCTTGTGACTGTCATTGAGCGTCCATGCCTCATATATACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216928.2 ENSMUST00000216977.2 |
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| CDS-3UTR CCA 90 bp | TATGAACTCACCAGTACCCCAAGAGCTCATATCTCTAGCTGTATATGTAGCAGAACACCTGCCAGCAAGTaGGAAGTGAAGAGCTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: YELTSTPRAHISSCICSRTPASK*EVKSWV Trigger: GACCCAGCTCTTCACTTCCCACTTGCTGGCAGGTGT...TCTGCTACATATACAGCTAGAGATATGAGCTCTTGGGGTACTGGTGAGTTCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216928.2 ENSMUST00000216977.2 |
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| CDS-3UTR CCA 90 bp | GGTATATATGAGGCATGGACGCTCAATGACAGTCACAAGAGCAAGCTAGGCAAGGGTTGTTCTATTAGGTaGCTGCAGGTGATGGTGAAT | + |
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Preference number: 4 (lower is better) Translates to: GIYEAWTLNDSHKSKLGKGCSIR*LQVMVN Trigger: ATTCACCATCACCTGCAGCCACCTAATAGAACAACC...CTTGCCTAGCTTGCTCTTGTGACTGTCATTGAGCGTCCATGCCTCATATATACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216928.2 ENSMUST00000216977.2 |
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| CDS-3UTR TCA 90 bp | TCCTCTATCAAACCAAGAAAATTCTTGCAGCCTTTCCACCCATCTGATCATCTCGCGCTTCCCTGCAGATaGTCTTGTCCTCAGAGAATA | + |
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Preference number: 4 (lower is better) Translates to: SSIKPRKFLQPFHPSDHLALPCR*SCPQRI Trigger: TATTCTCTGAGGACAAGATCATCTGCAGGGAAGCGC...GAGATGATCAGATGGGTGGAAAGGCTGCAAGAATTTTCTTGGTTTGATAGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216928.2 ENSMUST00000216977.2 |
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| CDS-3UTR CCA 90 bp | GGTATATATGAGGCATGGACGCTCAATGACAGTCACAAGAGCAAGCTAGGCAAGGCACCATCCCAGAGTTaGCAATTGCTAAGATACTTA | + |
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Preference number: 4 (lower is better) Translates to: GIYEAWTLNDSHKSKLGKAPSQS*QLLRYL Trigger: TAAGTATCTTAGCAATTGCCAACTCTGGGATGGTGC...CTTGCCTAGCTTGCTCTTGTGACTGTCATTGAGCGTCCATGCCTCATATATACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216928.2 ENSMUST00000216977.2 |
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| 3UTR CAA 72 bp | GGTTGGTTGGTTGGTTGGTGGTTGGTTGTGTTTAGTTaGTTGATTTGCCACCAGAATCTTCCTGGAGAAGGT | + |
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Preference number: 4 (lower is better) Translates to: GWLVGWWLVVFS*LICHQNLPGEG Trigger: ACCTTCTCCAGGAAGATTCTGGTGGCAAATCAACAAACTAAACACAACCAACCACCAACCAACCAACCAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216928.2 ENSMUST00000216977.2 |
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| CDS-3UTR GCA 90 bp | GCAGGCCTCCCAGGGCTATCCACAGAACATGGCTTAACAAGGTACAATAAGACTTCTATTTGTCTATTCTaGCAAAGACCCATGAAAATG | + |
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Preference number: 4 (lower is better) Translates to: AGLPGLSTEHGLTRYNKTSICLF*QRPMKM Trigger: CATTTTCATGGGTCTTTGGCAGAATAGACAAATAGA...AGTCTTATTGTACCTTGTTAAGCCATGTTCTGTGGATAGCCCTGGGAGGCCTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216928.2 ENSMUST00000216977.2 |
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| 3UTR CAA 72 bp | TGGTTGGTTGGTTGGTGGTTGGTTGTGTTTAGTTTGTaGATTTGCCACCAGAATCTTCCTGGAGAAGGTAAA | + |
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Preference number: 4 (lower is better) Translates to: WLVGWWLVVFSL*ICHQNLPGEGK Trigger: TTTACCTTCTCCAGGAAGATTCTGGTGGCAAATCAACAAACTAAACACAACCAACCACCAACCAACCAACCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216928.2 ENSMUST00000216977.2 |
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| 3UTR CAA 72 bp | CATCCTAACATGTCCTCTATCAAACCAAGAAAATTCTaGCAGCCTTTCCACCCATCTGATCATCTCTGGATA | + |
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Preference number: 4 (lower is better) Translates to: HPNMSSIKPRKF*QPFHPSDHLWI Trigger: TATCCAGAGATGATCAGATGGGTGGAAAGGCTGCAAGAATTTTCTTGGTTTGATAGAGGACATGTTAGGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216928.2 ENSMUST00000216977.2 |
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| CDS GCA 90 bp | CCACAGAATGGCAGACTGAGCACCATCAGTAGTAAAGCAATGGAGTaGCAGAACCCCAGTATCCAGGCCGTGACAATCAACATATCACAT | + |
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Preference number: 5 (lower is better) Translates to: PQNGRLSTISSKAME*QNPSIQAVTINISH Trigger: ATGTGATATGTTGATTGTCACGGCCTGGATACTGGGGTTCTGGCACTCCATTGCTTTACTACTGATGGTGCTCAGTCTGCCATTCTGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000104892.2 ENSMUST00000216928.2 ENSMUST00000216977.2 |
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| CDS-3UTR CAA 90 bp | TCCTCTATCAAACCAAGAAAATTCTTGCAGCCTTTCCACCCATCTGATCATCTCTCCCAGAGTTGGCAATaGCTAAGATACTTACAACAT | + |
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Preference number: 5 (lower is better) Translates to: SSIKPRKFLQPFHPSDHLSQSWQ*LRYLQH Trigger: ATGTTGTAAGTATCTTAGCAATTGCCAACTCTGGGA...GAGATGATCAGATGGGTGGAAAGGCTGCAAGAATTTTCTTGGTTTGATAGAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216928.2 ENSMUST00000216977.2 |
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| CDS GCA 72 bp | CAAGGCCATGGACACCAGGATGAAGATTTCCACACCTaGCAGCAAGTGGGAAGTGAAGAGCTGGGTCATGCA | + |
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Preference number: 6 (lower is better) Translates to: QGHGHQDEDFHT*QQVGSEELGHA Trigger: TGCATGACCCAGCTCTTCACTTCCCACTTGCTGGCAGGTGTGGAAATCTTCATCCTGGTGTCCATGGCCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000104892.2 ENSMUST00000216928.2 ENSMUST00000216977.2 |
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| CDS CAA 72 bp | ACTACCATTATGTGTGAACTACAGGTAGAGAGTGCTTaGCGCTTCCCTGCAGATGATCTTGTCCTCAGAGAA | + |
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Preference number: 6 (lower is better) Translates to: TTIMCELQVESA*RFPADDLVLRE Trigger: TTCTCTGAGGACAAGATCATCTGCAGGGAAGCGCAAAGCACTCTCTACCTGTAGTTCACACATAATGGTAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000104892.2 ENSMUST00000216928.2 ENSMUST00000216977.2 |
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| CDS CAA 90 bp | AGCCAGATAGCAAAGCAGGAACAAGAGAAAGAACAGCAGCTCTATTaGTCTATTCTGCCAAAGACCCATGAAAATGAACTCTGTGACATT | + |
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Preference number: 6 (lower is better) Translates to: SQIAKQEQEKEQQLY*SILPKTHENELCDI Trigger: AATGTCACAGAGTTCATTTTCATGGGTCTTTGGCAGAATAGACAAATAGAGCTGCTGTTCTTTCTCTTGTTCCTGCTTTGCTATCTGGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000104892.2 ENSMUST00000216928.2 ENSMUST00000216977.2 |
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| CDS TCA 72 bp | ATCCCAGAGTTGGCAATTGCTAAGATACTTACAACATaGACGTCTTTACAGACCAATTTCAGAAGAGGCTTG | + |
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Preference number: 6 (lower is better) Translates to: IPELAIAKILTT*TSLQTNFRRGL Trigger: CAAGCCTCTTCTGAAATTGGTCTGTAAAGACGTTCATGTTGTAAGTATCTTAGCAATTGCCAACTCTGGGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000104892.2 ENSMUST00000216928.2 ENSMUST00000216977.2 |
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