RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OLFR1195 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000075121

Ensembl transcript IDs: ENSMUST00000099818.2, ENSMUST00000213545.2

Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp TATAATAAAGCCACAAGGCATGTTCTTCCTAACTTCAGAGGAACTCTGCCAGTGATTAAAGGATCCAAGTaGTCACACACACATGCACAC +
Preference number: 2 (lower is better)
Translates to: YNKATRHVLPNFRGTLPVIKGSK*SHTHAH
Trigger: GTGTGCATGTGTGTGTGATCACTTGGATCCTTTAAT...CACTGGCAGAGTTCCTCTGAAGTTAGGAAGAACATGCCTTGTGGCTTTATTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213545.2
3UTR-3UTR CCA 90 bp TATAATAAAGCCACAAGGCATGTTCTTCCTAACTTCAGAGGAACTCTGCCAGTGACCTTCCTAAGACAGTaGTATTTTAAAAGTAGGCGA +
Preference number: 2 (lower is better)
Translates to: YNKATRHVLPNFRGTLPVTFLRQ*YFKSRR
Trigger: TCGCCTACTTTTAAAATACCACTGTCTTAGGAAGGT...CACTGGCAGAGTTCCTCTGAAGTTAGGAAGAACATGCCTTGTGGCTTTATTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213545.2
CDS-3UTR CCA 90 bp TATAATAAAGCCACAAGGCATGTTCTTCCTAACTTCAGAGGAACTCTGCCAGTGACAGGAAGAAGTACATaGGACTCCCAAGGGCCGGGC +
Preference number: 4 (lower is better)
Translates to: YNKATRHVLPNFRGTLPVTGRST*DSQGPG
Trigger: GCCCGGCCCTTGGGAGTCCCATGTACTTCTTCCTGT...CACTGGCAGAGTTCCTCTGAAGTTAGGAAGAACATGCCTTGTGGCTTTATTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213545.2
CDS-3UTR CCA 90 bp TATAATAAAGCCACAAGGCATGTTCTTCCTAACTTCAGAGGAACTCTGCCAGTGATCCCACACAGACTGTaGCCACCAGCATTCCACAGA +
Preference number: 4 (lower is better)
Translates to: YNKATRHVLPNFRGTLPVIPHRL*PPAFHR
Trigger: TCTGTGGAATGCTGGTGGCCACAGTCTGTGTGGGAT...CACTGGCAGAGTTCCTCTGAAGTTAGGAAGAACATGCCTTGTGGCTTTATTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213545.2
CDS-3UTR GCA 90 bp TATAATAAAGCCACAAGGCATGTTCTTCCTAACTTCAGAGGAACTCTGCCAGTGACACTATGTTCTTCCTaGTGGGGTCCTGTGTCAATC +
Preference number: 4 (lower is better)
Translates to: YNKATRHVLPNFRGTLPVTLCSS*WGPVSI
Trigger: GATTGACACAGGACCCCAGCAGGAAGAACATAGTGT...CACTGGCAGAGTTCCTCTGAAGTTAGGAAGAACATGCCTTGTGGCTTTATTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213545.2
CDS-3UTR TCA 90 bp GGACCTAATAGGGATAAATATTTAAACAATGTGACTGAGACAAACGTTTGCATCAGACCTGGCGATTCATaGTGGTCATATAGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: GPNRDKYLNNVTETNVCIRPGDS*WSYSAE
Trigger: CTCTGCACTATATGACCATCATGAATCGCCAGGTCT...GATGCAAACGTTTGTCTCAGTCACATTGTTTAAATATTTATCCCTATTAGGTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213545.2
CDS-3UTR CCA 90 bp GGACCTAATAGGGATAAATATTTAAACAATGTGACTGAGACAAACGTTTGCATCCTATGTTCTTCCTGCTaGGGTCCTGTGTCAATCCAA +
Preference number: 4 (lower is better)
Translates to: GPNRDKYLNNVTETNVCILCSSC*GPVSIQ
Trigger: TTGGATTGACACAGGACCCCAGCAGGAAGAACATAG...GATGCAAACGTTTGTCTCAGTCACATTGTTTAAATATTTATCCCTATTAGGTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213545.2
3UTR CAA 72 bp TTAAACAATGTGACTGAGACAAACGTTTGCATCTTATaGCTACATCCTCTTTTGCAAAAGACTAGTTTGATG +
Preference number: 4 (lower is better)
Translates to: LNNVTETNVCIL*LHPLLQKTSLM
Trigger: CATCAAACTAGTCTTTTGCAAAAGAGGATGTAGCAATAAGATGCAAACGTTTGTCTCAGTCACATTGTTTAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213545.2
CDS-3UTR CAA 90 bp GGACCTAATAGGGATAAATATTTAAACAATGTGACTGAGACAAACGTTTGCATCTCGGGGCTACAGTTGTaGAGAAGCAGGTGTCAGACA +
Preference number: 5 (lower is better)
Translates to: GPNRDKYLNNVTETNVCISGLQL*RSRCQT
Trigger: TGTCTGACACCTGCTTCTCAACAACTGTAGCCCCGA...GATGCAAACGTTTGTCTCAGTCACATTGTTTAAATATTTATCCCTATTAGGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213545.2
CDS TCA 90 bp CCCCTCAGCACTGTGATTCCTCAAAGAATAGAGAATAATGATATATaGGACCATGAGCATAAGGAAACTCACTGTACAAAGGGTTCCACT +
Preference number: 5 (lower is better)
Translates to: PLSTVIPQRIENNDI*DHEHKETHCTKGST
Trigger: AGTGGAACCCTTTGTACAGTGAGTTTCCTTATGCTCATGGTCTCATATATCATTATTCTCTATTCTTTGAGGAATCACAGTGCTGAGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099818.2
ENSMUST00000213545.2
CDS CAA 90 bp AGGCCTCTTTCAGCAGGGAATCCACAATTGTTCTCGGGGCTACAGTaGTTGAGAAGCAGGTGTCAGACAAGGATAAGTAGAACAGGAAGA +
Preference number: 6 (lower is better)
Translates to: RPLSAGNPQLFSGLQ*LRSRCQTRISRTGR
Trigger: TCTTCCTGTTCTACTTATCCTTGTCTGACACCTGCTTCTCAACAACTGTAGCCCCGAGAACAATTGTGGATTCCCTGCTGAAAGAGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099818.2
ENSMUST00000213545.2
CDS CAA 90 bp CCTCTTTCAGCAGGGAATCCACAATTGTTCTCGGGGCTACAGTTGTaGAGAAGCAGGTGTCAGACAAGGATAAGTAGAACAGGAAGAAGT +
Preference number: 6 (lower is better)
Translates to: PLSAGNPQLFSGLQL*RSRCQTRISRTGRS
Trigger: ACTTCTTCCTGTTCTACTTATCCTTGTCTGACACCTGCTTCTCAACAACTGTAGCCCCGAGAACAATTGTGGATTCCCTGCTGAAAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099818.2
ENSMUST00000213545.2
CDS CAA 72 bp GCAGGGAATCCACAATTGTTCTCGGGGCTACAGTTGTaGAGAAGCAGGTGTCAGACAAGGATAAGTAGAACA +
Preference number: 6 (lower is better)
Translates to: AGNPQLFSGLQL*RSRCQTRISRT
Trigger: TGTTCTACTTATCCTTGTCTGACACCTGCTTCTCAACAACTGTAGCCCCGAGAACAATTGTGGATTCCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099818.2
ENSMUST00000213545.2
CDS CAA 72 bp TCAGCAGGGAATCCACAATTGTTCTCGGGGCTACAGTaGTTGAGAAGCAGGTGTCAGACAAGGATAAGTAGA +
Preference number: 6 (lower is better)
Translates to: SAGNPQLFSGLQ*LRSRCQTRISR
Trigger: TCTACTTATCCTTGTCTGACACCTGCTTCTCAACAACTGTAGCCCCGAGAACAATTGTGGATTCCCTGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099818.2
ENSMUST00000213545.2
CDS CAA 72 bp AGCATAAGGAAACTCACTGTACAAAGGGTTCCACTATaGGACACCAGGAGAAGGTTGATCACATATGTGTCG +
Preference number: 6 (lower is better)
Translates to: SIRKLTVQRVPL*DTRRRLITYVS
Trigger: CGACACATATGTGATCAACCTTCTCCTGGTGTCCAATAGTGGAACCCTTTGTACAGTGAGTTTCCTTATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099818.2
ENSMUST00000213545.2
CDS TCA 72 bp ACTGTGATTCCTCAAAGAATAGAGAATAATGATATATaGGACCATGAGCATAAGGAAACTCACTGTACAAAG +
Preference number: 6 (lower is better)
Translates to: TVIPQRIENNDI*DHEHKETHCTK
Trigger: CTTTGTACAGTGAGTTTCCTTATGCTCATGGTCTCATATATCATTATTCTCTATTCTTTGAGGAATCACAGT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099818.2
ENSMUST00000213545.2