Pregenerated sensors for OLFR1193 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000060827Ensembl transcript IDs: ENSMUST00000081697.2, ENSMUST00000213893.2, ENSMUST00000216767.2
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACAGGAGCCTGGTATTGCTGCCCTCAGAGAGATTCTGCCATTGCCTaGCTAAGACAGATGCAGATACTTACAACCAACCATCGGACTGAG | + |
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Preference number: 1 (lower is better) Translates to: TGAWYCCPQRDSAIA*LRQMQILTTNHRTE Trigger: CTCAGTCCGATGGTTGGTTGTAAGTATCTGCATCTGTCTTAGTCAGGCAATGGCAGAATCTCTCTGAGGGCAGCAATACCAGGCTCCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213893.2 ENSMUST00000216767.2 |
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| 3UTR GCA 90 bp | GTAGACAGGAGCCTGGTATTGCTGCCCTCAGAGAGATTCTGCCATTaGCTGACTAAGACAGATGCAGATACTTACAACCAACCATCGGAC | + |
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Preference number: 1 (lower is better) Translates to: VDRSLVLLPSERFCH*LTKTDADTYNQPSD Trigger: GTCCGATGGTTGGTTGTAAGTATCTGCATCTGTCTTAGTCAGGCAATGGCAGAATCTCTCTGAGGGCAGCAATACCAGGCTCCTGTCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213893.2 ENSMUST00000216767.2 |
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| 3UTR TCA 90 bp | CTGGATCCACTATGCTTCATAGATGATGAAACAGGGACAAGAGAGTaGGTAGGAGATCTTCCTGCCTTCAAACATGGTATTTCTGATGTT | + |
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Preference number: 1 (lower is better) Translates to: LDPLCFIDDETGTRE*VGDLPAFKHGISDV Trigger: AACATCAGAAATACCATGTTTGAAGGCAGGAAGATCTCCTACTCACTCTCTTGTCCCTGTTTCATCATCTATGAAGCATAGTGGATCCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213893.2 ENSMUST00000216767.2 |
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| 3UTR-3UTR CCA 90 bp | GACTGCCTTATCTCAGGCATCAAGTGGAGGGGAGGTACTAGGTCCTGTGAAGGCGCTGGAGGGGTGAGCTaGAAGTGGGTGGGGGAGCAC | + |
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Preference number: 2 (lower is better) Translates to: DCLISGIKWRGGTRSCEGAGGVS*KWVGEH Trigger: GTGCTCCCCCACCCACTTCCAGCTCACCCCTCCAGC...GCCTTCACAGGACCTAGTACCTCCCCTCCACTTGATGCCTGAGATAAGGCAGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000213893.2 ENSMUST00000216767.2 |
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| 3UTR-3UTR CCA 90 bp | TGTAGACAGGAGCCTGGTATTGCTGCCCTCAGAGAGATTCTGCCATTGCCTGACGCTGGAGGGGTGAGCTaGAAGTGGGTGGGGGAGCAC | + |
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Preference number: 2 (lower is better) Translates to: CRQEPGIAALREILPLPDAGGVS*KWVGEH Trigger: GTGCTCCCCCACCCACTTCCAGCTCACCCCTCCAGC...GTCAGGCAATGGCAGAATCTCTCTGAGGGCAGCAATACCAGGCTCCTGTCTACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213893.2 ENSMUST00000216767.2 |
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| 3UTR-3UTR GCA 90 bp | GACCCCTCAGATATCCCAGGTACTAAATCACCAACCAAAGAGTATACATGTGTGCCCAGTGAAGGGGGATaGTGGAGGGGTGAGCTGGAA | + |
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Preference number: 2 (lower is better) Translates to: DPSDIPGTKSPTKEYTCVPSEGG*WRGELE Trigger: TTCCAGCTCACCCCTCCAGCATCCCCCTTCACTGGG...CACACATGTATACTCTTTGGTTGGTGATTTAGTACCTGGGATATCTGAGGGGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000213893.2 ENSMUST00000216767.2 |
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| 3UTR-3UTR GCA 90 bp | GACCCCTCAGATATCCCAGGTACTAAATCACCAACCAAAGAGTATACATGTGTGCCTGTGAAGGCTTGTTaGCCCAGTGAAGGGGGATGC | + |
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Preference number: 2 (lower is better) Translates to: DPSDIPGTKSPTKEYTCVPVKAC*PSEGGC Trigger: GCATCCCCCTTCACTGGGGCAACAAGCCTTCACAGG...CACACATGTATACTCTTTGGTTGGTGATTTAGTACCTGGGATATCTGAGGGGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213893.2 ENSMUST00000216767.2 |
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| 3UTR-3UTR TCA 90 bp | GACTGCCTTATCTCAGGCATCAAGTGGAGGGGAGGTACTAGGTCCTGTGAAGGCTACATGCCATATAACTaGGGTCAATTCAAAAATCCC | + |
|
Preference number: 2 (lower is better) Translates to: DCLISGIKWRGGTRSCEGYMPYN*GQFKNP Trigger: GGGATTTTTGAATTGACCTCAGTTATATGGCATGTA...GCCTTCACAGGACCTAGTACCTCCCCTCCACTTGATGCCTGAGATAAGGCAGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213893.2 ENSMUST00000216767.2 |
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| 3UTR-3UTR TCA 90 bp | TGTAGACAGGAGCCTGGTATTGCTGCCCTCAGAGAGATTCTGCCATTGCCTGACTACATGCCATATAACTaGGGTCAATTCAAAAATCCC | + |
|
Preference number: 2 (lower is better) Translates to: CRQEPGIAALREILPLPDYMPYN*GQFKNP Trigger: GGGATTTTTGAATTGACCTCAGTTATATGGCATGTA...GTCAGGCAATGGCAGAATCTCTCTGAGGGCAGCAATACCAGGCTCCTGTCTACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213893.2 ENSMUST00000216767.2 |
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| 3UTR-3UTR GCA 90 bp | TGTAGACAGGAGCCTGGTATTGCTGCCCTCAGAGAGATTCTGCCATTGCCTGACTTAGATATGGTGCTTTaGATGTGTATGATTGCATAC | + |
|
Preference number: 2 (lower is better) Translates to: CRQEPGIAALREILPLPDLDMVL*MCMIAY Trigger: GTATGCAATCATACACATGCAAAGCACCATATCTAA...GTCAGGCAATGGCAGAATCTCTCTGAGGGCAGCAATACCAGGCTCCTGTCTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213893.2 ENSMUST00000216767.2 |
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| 3UTR-3UTR CCA 90 bp | TTGCCTTGTTTCAAAAATGTGCAACATAGGAAGTCTTCTATGTGTTGTAAGCCTAGTGAAGGGGGATGCTaGAGGGGTGAGCTGGAAGTG | + |
|
Preference number: 2 (lower is better) Translates to: LPCFKNVQHRKSSMCCKPSEGGC*RGELEV Trigger: CACTTCCAGCTCACCCCTCCAGCATCCCCCTTCACT...AGGCTTACAACACATAGAAGACTTCCTATGTTGCACATTTTTGAAACAAGGCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000213893.2 ENSMUST00000216767.2 |
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| 3UTR-3UTR TCA 90 bp | GGCTGTCCTGGTACATGCCATATAACTGAGGTCAATTCAAAAATCCCATACCTCTGTTGTAGATCCCAGTaGAGGGAAGTTTTATACTCC | + |
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Preference number: 2 (lower is better) Translates to: GCPGTCHITEVNSKIPYLCCRSQ*REVLYS Trigger: GGAGTATAAAACTTCCCTTCACTGGGATCTACAACA...GAGGTATGGGATTTTTGAATTGACCTCAGTTATATGGCATGTACCAGGACAGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213893.2 ENSMUST00000216767.2 |
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| 3UTR-3UTR TCA 90 bp | TTGCCTTGTTTCAAAAATGTGCAACATAGGAAGTCTTCTATGTGTTGTAAGCCTACAGGGACAAGAGAGTaGGTAGGAGATCTTCCTGCC | + |
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Preference number: 2 (lower is better) Translates to: LPCFKNVQHRKSSMCCKPTGTRE*VGDLPA Trigger: GGCAGGAAGATCTCCTACTCACTCTCTTGTCCCTGT...AGGCTTACAACACATAGAAGACTTCCTATGTTGCACATTTTTGAAACAAGGCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213893.2 ENSMUST00000216767.2 |
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| 3UTR-3UTR GCA 90 bp | TTGCCTTGTTTCAAAAATGTGCAACATAGGAAGTCTTCTATGTGTTGTAAGCCTCCCAGGGTGAGGAAATaGAGGGCCAAAGACACCAAA | + |
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Preference number: 2 (lower is better) Translates to: LPCFKNVQHRKSSMCCKPPRVRK*RAKDTK Trigger: TTTGGTGTCTTTGGCCCTGCATTTCCTCACCCTGGG...AGGCTTACAACACATAGAAGACTTCCTATGTTGCACATTTTTGAAACAAGGCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213893.2 ENSMUST00000216767.2 |
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| 3UTR-3UTR TCA 90 bp | CCTGGTACATGCCATATAACTGAGGTCAATTCAAAAATCCCATACCTCATCCTATGCTTTGCATGTGTATaGTTGCATACACATGTAGGG | + |
|
Preference number: 2 (lower is better) Translates to: PGTCHITEVNSKIPYLILCFACV*LHTHVG Trigger: CCCTACATGTGTATGCAATCATACACATGCAAAGCA...TAGGATGAGGTATGGGATTTTTGAATTGACCTCAGTTATATGGCATGTACCAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213893.2 ENSMUST00000216767.2 |
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| 3UTR-3UTR TCA 90 bp | TTGCCTTGTTTCAAAAATGTGCAACATAGGAAGTCTTCTATGTGTTGTAAGCCTTGCTTTGCATGTGTATaGTTGCATACACATGTAGGG | + |
|
Preference number: 2 (lower is better) Translates to: LPCFKNVQHRKSSMCCKPCFACV*LHTHVG Trigger: CCCTACATGTGTATGCAATCATACACATGCAAAGCA...AGGCTTACAACACATAGAAGACTTCCTATGTTGCACATTTTTGAAACAAGGCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213893.2 ENSMUST00000216767.2 |
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| 3UTR-3UTR GCA 90 bp | TTGCCTTGTTTCAAAAATGTGCAACATAGGAAGTCTTCTATGTGTTGTAAGCCTTTAGATATGGTGCTTTaGATGTGTATGATTGCATAC | + |
|
Preference number: 2 (lower is better) Translates to: LPCFKNVQHRKSSMCCKPLDMVL*MCMIAY Trigger: GTATGCAATCATACACATGCAAAGCACCATATCTAA...AGGCTTACAACACATAGAAGACTTCCTATGTTGCACATTTTTGAAACAAGGCAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213893.2 ENSMUST00000216767.2 |
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| 3UTR-3UTR CAA 90 bp | TGTAGACAGGAGCCTGGTATTGCTGCCCTCAGAGAGATTCTGCCATTGCCTGACCAAAGGGGAGGGGGATaGGGAGAAGTGTTTATAGAG | + |
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Preference number: 3 (lower is better) Translates to: CRQEPGIAALREILPLPDQRGGG*GEVFIE Trigger: CTCTATAAACACTTCTCCCAATCCCCCTCCCCTTTG...GTCAGGCAATGGCAGAATCTCTCTGAGGGCAGCAATACCAGGCTCCTGTCTACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213893.2 ENSMUST00000216767.2 |
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| 3UTR-3UTR CAA 90 bp | GACCCCTCAGATATCCCAGGTACTAAATCACCAACCAAAGAGTATACATGTGTGCAAAGGGGAGGGGGATaGGGAGAAGTGTTTATAGAG | + |
|
Preference number: 3 (lower is better) Translates to: DPSDIPGTKSPTKEYTCVQRGGG*GEVFIE Trigger: CTCTATAAACACTTCTCCCAATCCCCCTCCCCTTTG...CACACATGTATACTCTTTGGTTGGTGATTTAGTACCTGGGATATCTGAGGGGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000213893.2 ENSMUST00000216767.2 |
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| 3UTR GCA 72 bp | AGCCTGGTATTGCTGCCCTCAGAGAGATTCTGCCATTaGCTGACTAAGACAGATGCAGATACTTACAACCAA | + |
|
Preference number: 3 (lower is better) Translates to: SLVLLPSERFCH*LTKTDADTYNQ Trigger: TTGGTTGTAAGTATCTGCATCTGTCTTAGTCAGGCAATGGCAGAATCTCTCTGAGGGCAGCAATACCAGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213893.2 ENSMUST00000216767.2 |
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| 3UTR TCA 72 bp | TGGTATTGCTGCCCTCAGAGAGATTCTGCCATTGCCTaGCTAAGACAGATGCAGATACTTACAACCAACCAT | + |
|
Preference number: 3 (lower is better) Translates to: WYCCPQRDSAIA*LRQMQILTTNH Trigger: ATGGTTGGTTGTAAGTATCTGCATCTGTCTTAGTCAGGCAATGGCAGAATCTCTCTGAGGGCAGCAATACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213893.2 ENSMUST00000216767.2 |
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| 3UTR CCA 72 bp | CAGGTACTAAATCACCAACCAAAGAGTATACATGTGTaGGTCCATGGTTCCAGCTACATATGTAGCAGAGGA | + |
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Preference number: 3 (lower is better) Translates to: QVLNHQPKSIHV*VHGSSYICSRG Trigger: TCCTCTGCTACATATGTAGCTGGAACCATGGACCCACACATGTATACTCTTTGGTTGGTGATTTAGTACCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213893.2 ENSMUST00000216767.2 |
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| 3UTR-3UTR CAA 90 bp | TTGCCTTGTTTCAAAAATGTGCAACATAGGAAGTCTTCTATGTGTTGTAAGCCTAGACATGTACCTTATTaGAAGAAAATAGCACCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LPCFKNVQHRKSSMCCKPRHVPY*KKIAPR Trigger: CCTGGGTGCTATTTTCTTCAAATAAGGTACATGTCT...AGGCTTACAACACATAGAAGACTTCCTATGTTGCACATTTTTGAAACAAGGCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213893.2 ENSMUST00000216767.2 |
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| 3UTR TCA 72 bp | ACATTTCATTTACATGGCAAGGTAAAGAAAAACAGATaGGATGAAGTCTCAGTTTTTGAGGCTGTCCTGGTA | + |
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Preference number: 3 (lower is better) Translates to: TFHLHGKVKKNR*DEVSVFEAVLV Trigger: TACCAGGACAGCCTCAAAAACTGAGACTTCATCTCATCTGTTTTTCTTTACCTTGCCATGTAAATGAAATGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000213893.2 ENSMUST00000216767.2 |
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| 3UTR TCA 72 bp | ATTTTTACCAACGAAGTCTCATGTTGTAGATCCCAGTaGAGGGAAGTTTTATACTCCGAAATTTATGTCCAA | + |
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Preference number: 3 (lower is better) Translates to: IFTNEVSCCRSQ*REVLYSEIYVQ Trigger: TTGGACATAAATTTCGGAGTATAAAACTTCCCTTCACTGGGATCTACAACATGAGACTTCGTTGGTAAAAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213893.2 ENSMUST00000216767.2 |
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| CDS-3UTR GCA 90 bp | TGTAGACAGGAGCCTGGTATTGCTGCCCTCAGAGAGATTCTGCCATTGCCTGACTTCCCAATGCAATGGTaGCACTGTTTGCTGTCACAA | + |
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Preference number: 4 (lower is better) Translates to: CRQEPGIAALREILPLPDFPMQW*HCLLSQ Trigger: TTGTGACAGCAAACAGTGGCACCATTGCATTGGGAA...GTCAGGCAATGGCAGAATCTCTCTGAGGGCAGCAATACCAGGCTCCTGTCTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213893.2 ENSMUST00000216767.2 |
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| CDS-3UTR CCA 90 bp | GACCCCTCAGATATCCCAGGTACTAAATCACCAACCAAAGAGTATACATGTGTGCCACAAAAGGGGAGCTaGACCACAAGAGCCACTTGG | + |
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Preference number: 4 (lower is better) Translates to: DPSDIPGTKSPTKEYTCVPQKGS*TTRATW Trigger: CCAAGTGGCTCTTGTGGTCCAGCTCCCCTTTTGTGG...CACACATGTATACTCTTTGGTTGGTGATTTAGTACCTGGGATATCTGAGGGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000213893.2 ENSMUST00000216767.2 |
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| CDS-3UTR TCA 90 bp | GACTGCCTTATCTCAGGCATCAAGTGGAGGGGAGGTACTAGGTCCTGTGAAGGCAATACATGGGAAACTTaGAAAGATTGCCACTGCAAA | + |
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Preference number: 4 (lower is better) Translates to: DCLISGIKWRGGTRSCEGNTWET*KDCHCK Trigger: TTTGCAGTGGCAATCTTTTCAAGTTTCCCATGTATT...GCCTTCACAGGACCTAGTACCTCCCCTCCACTTGATGCCTGAGATAAGGCAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213893.2 ENSMUST00000216767.2 |
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| CDS-3UTR TCA 90 bp | GACCCCTCAGATATCCCAGGTACTAAATCACCAACCAAAGAGTATACATGTGTGGCGTCTGCCTTCAGATaGCTGCTTTCTCAGAGACAT | + |
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Preference number: 4 (lower is better) Translates to: DPSDIPGTKSPTKEYTCVASAFR*LLSQRH Trigger: ATGTCTCTGAGAAAGCAGTCATCTGAAGGCAGACGC...CACACATGTATACTCTTTGGTTGGTGATTTAGTACCTGGGATATCTGAGGGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213893.2 ENSMUST00000216767.2 |
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| CDS-3UTR CCA 90 bp | CCTGGTACATGCCATATAACTGAGGTCAATTCAAAAATCCCATACCTCATCCTACCACAAAAGGGGAGCTaGACCACAAGAGCCACTTGG | + |
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Preference number: 4 (lower is better) Translates to: PGTCHITEVNSKIPYLILPQKGS*TTRATW Trigger: CCAAGTGGCTCTTGTGGTCCAGCTCCCCTTTTGTGG...TAGGATGAGGTATGGGATTTTTGAATTGACCTCAGTTATATGGCATGTACCAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000213893.2 ENSMUST00000216767.2 |
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| CDS-3UTR GCA 90 bp | GACCCCTCAGATATCCCAGGTACTAAATCACCAACCAAAGAGTATACATGTGTGAGAGAGCTTTGCGTCTaGCTTCAGATGACTGCTTTC | + |
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Preference number: 4 (lower is better) Translates to: DPSDIPGTKSPTKEYTCVRELCV*LQMTAF Trigger: GAAAGCAGTCATCTGAAGGCAGACGCAAAGCTCTCT...CACACATGTATACTCTTTGGTTGGTGATTTAGTACCTGGGATATCTGAGGGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213893.2 ENSMUST00000216767.2 |
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| CDS-3UTR TCA 90 bp | GGCTGTCCTGGTACATGCCATATAACTGAGGTCAATTCAAAAATCCCATACCTCTCAACCTCAGGGTTCTaGGAAAGACCCAAGAAAATG | + |
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Preference number: 4 (lower is better) Translates to: GCPGTCHITEVNSKIPYLSTSGF*ERPKKM Trigger: CATTTTCTTGGGTCTTTCTCAGAACCCTGAGGTTGA...GAGGTATGGGATTTTTGAATTGACCTCAGTTATATGGCATGTACCAGGACAGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213893.2 ENSMUST00000216767.2 |
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| CDS-3UTR TCA 90 bp | CCTGGTACATGCCATATAACTGAGGTCAATTCAAAAATCCCATACCTCATCCTAGCGTCTGCCTTCAGATaGCTGCTTTCTCAGAGACAT | + |
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Preference number: 4 (lower is better) Translates to: PGTCHITEVNSKIPYLILASAFR*LLSQRH Trigger: ATGTCTCTGAGAAAGCAGTCATCTGAAGGCAGACGC...TAGGATGAGGTATGGGATTTTTGAATTGACCTCAGTTATATGGCATGTACCAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213893.2 ENSMUST00000216767.2 |
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| CDS-3UTR GCA 90 bp | GACCCCTCAGATATCCCAGGTACTAAATCACCAACCAAAGAGTATACATGTGTGTTCCCAATGCAATGGTaGCACTGTTTGCTGTCACAA | + |
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Preference number: 4 (lower is better) Translates to: DPSDIPGTKSPTKEYTCVFPMQW*HCLLSQ Trigger: TTGTGACAGCAAACAGTGGCACCATTGCATTGGGAA...CACACATGTATACTCTTTGGTTGGTGATTTAGTACCTGGGATATCTGAGGGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213893.2 ENSMUST00000216767.2 |
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| CDS-3UTR CCA 90 bp | GACCCCTCAGATATCCCAGGTACTAAATCACCAACCAAAGAGTATACATGTGTGATGACAACAGCAATGTaGGATCCACAAGTGGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: DPSDIPGTKSPTKEYTCVMTTAM*DPQVER Trigger: TCTCTCCACTTGTGGATCCCACATTGCTGTTGTCAT...CACACATGTATACTCTTTGGTTGGTGATTTAGTACCTGGGATATCTGAGGGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213893.2 ENSMUST00000216767.2 |
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| CDS-3UTR GCA 90 bp | CCTGGTACATGCCATATAACTGAGGTCAATTCAAAAATCCCATACCTCATCCTAAGAGAGCTTTGCGTCTaGCTTCAGATGACTGCTTTC | + |
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Preference number: 4 (lower is better) Translates to: PGTCHITEVNSKIPYLILRELCV*LQMTAF Trigger: GAAAGCAGTCATCTGAAGGCAGACGCAAAGCTCTCT...TAGGATGAGGTATGGGATTTTTGAATTGACCTCAGTTATATGGCATGTACCAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213893.2 ENSMUST00000216767.2 |
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| CDS-3UTR TCA 90 bp | CCTGGTACATGCCATATAACTGAGGTCAATTCAAAAATCCCATACCTCATCCTATCAACCTCAGGGTTCTaGGAAAGACCCAAGAAAATG | + |
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Preference number: 4 (lower is better) Translates to: PGTCHITEVNSKIPYLILSTSGF*ERPKKM Trigger: CATTTTCTTGGGTCTTTCTCAGAACCCTGAGGTTGA...TAGGATGAGGTATGGGATTTTTGAATTGACCTCAGTTATATGGCATGTACCAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213893.2 ENSMUST00000216767.2 |
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| CDS-3UTR TCA 90 bp | GGCTGTCCTGGTACATGCCATATAACTGAGGTCAATTCAAAAATCCCATACCTCGTGCAACCAAAGAAATaGACCACAAAGAGTTGTAAC | + |
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Preference number: 4 (lower is better) Translates to: GCPGTCHITEVNSKIPYLVQPKK*TTKSCN Trigger: GTTACAACTCTTTGTGGTTCATTTCTTTGGTTGCAC...GAGGTATGGGATTTTTGAATTGACCTCAGTTATATGGCATGTACCAGGACAGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213893.2 ENSMUST00000216767.2 |
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| CDS-3UTR GCA 90 bp | GACCCCTCAGATATCCCAGGTACTAAATCACCAACCAAAGAGTATACATGTGTGAATGGTGCCACTGTTTaGTGTCACAAAAATACCAAC | + |
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Preference number: 4 (lower is better) Translates to: DPSDIPGTKSPTKEYTCVNGATV*CHKNTN Trigger: GTTGGTATTTTTGTGACAGCAAACAGTGGCACCATT...CACACATGTATACTCTTTGGTTGGTGATTTAGTACCTGGGATATCTGAGGGGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213893.2 ENSMUST00000216767.2 |
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| CDS-3UTR CCA 90 bp | GGCTGTCCTGGTACATGCCATATAACTGAGGTCAATTCAAAAATCCCATACCTCACCACAAGAGCCACTTaGATAATAGAATGTAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: GCPGTCHITEVNSKIPYLTTRAT*IIECKK Trigger: CTTCTTACATTCTATTATCCAAGTGGCTCTTGTGGT...GAGGTATGGGATTTTTGAATTGACCTCAGTTATATGGCATGTACCAGGACAGCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213893.2 ENSMUST00000216767.2 |
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| CDS-3UTR TCA 90 bp | CCTGGTACATGCCATATAACTGAGGTCAATTCAAAAATCCCATACCTCATCCTAAATACATGGGAAACTTaGAAAGATTGCCACTGCAAA | + |
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Preference number: 4 (lower is better) Translates to: PGTCHITEVNSKIPYLILNTWET*KDCHCK Trigger: TTTGCAGTGGCAATCTTTTCAAGTTTCCCATGTATT...TAGGATGAGGTATGGGATTTTTGAATTGACCTCAGTTATATGGCATGTACCAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213893.2 ENSMUST00000216767.2 |
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| CDS-3UTR CCA 90 bp | CCTGGTACATGCCATATAACTGAGGTCAATTCAAAAATCCCATACCTCATCCTAACCACAAGAGCCACTTaGATAATAGAATGTAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PGTCHITEVNSKIPYLILTTRAT*IIECKK Trigger: CTTCTTACATTCTATTATCCAAGTGGCTCTTGTGGT...TAGGATGAGGTATGGGATTTTTGAATTGACCTCAGTTATATGGCATGTACCAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213893.2 ENSMUST00000216767.2 |
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| CDS CCA 90 bp | ATCTCATTCGGTCCACAAAAGGGGAGCTGGACCACAAGAGCCACTTaGATAATAGAATGTAAGAAGCCACCGATCCATGTTCCGAGCAAC | + |
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Preference number: 5 (lower is better) Translates to: ISFGPQKGSWTTRAT*IIECKKPPIHVPSN Trigger: GTTGCTCGGAACATGGATCGGTGGCTTCTTACATTCTATTATCCAAGTGGCTCTTGTGGTCCAGCTCCCCTTTTGTGGACCGAATGAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000081697.2 ENSMUST00000213893.2 ENSMUST00000216767.2 |
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| CDS-3UTR CAA 90 bp | GACTGCCTTATCTCAGGCATCAAGTGGAGGGGAGGTACTAGGTCCTGTGAAGGCAAATACATGGGAAACTaGAAAAGATTGCCACTGCAA | + |
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Preference number: 5 (lower is better) Translates to: DCLISGIKWRGGTRSCEGKYMGN*KRLPLQ Trigger: TTGCAGTGGCAATCTTTTCAAGTTTCCCATGTATTT...GCCTTCACAGGACCTAGTACCTCCCCTCCACTTGATGCCTGAGATAAGGCAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213893.2 ENSMUST00000216767.2 |
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| CDS-3UTR CAA 90 bp | TGTAGACAGGAGCCTGGTATTGCTGCCCTCAGAGAGATTCTGCCATTGCCTGACAAATACATGGGAAACTaGAAAAGATTGCCACTGCAA | + |
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Preference number: 5 (lower is better) Translates to: CRQEPGIAALREILPLPDKYMGN*KRLPLQ Trigger: TTGCAGTGGCAATCTTTTCAAGTTTCCCATGTATTT...GTCAGGCAATGGCAGAATCTCTCTGAGGGCAGCAATACCAGGCTCCTGTCTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213893.2 ENSMUST00000216767.2 |
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| CDS-3UTR CAA 90 bp | GACCCCTCAGATATCCCAGGTACTAAATCACCAACCAAAGAGTATACATGTGTGGGAAACTTGAAAAGATaGCCACTGCAAACTGTCAAC | + |
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Preference number: 5 (lower is better) Translates to: DPSDIPGTKSPTKEYTCVGNLKR*PLQTVN Trigger: GTTGACAGTTTGCAGTGGCAATCTTTTCAAGTTTCC...CACACATGTATACTCTTTGGTTGGTGATTTAGTACCTGGGATATCTGAGGGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213893.2 ENSMUST00000216767.2 |
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| CDS-3UTR CAA 90 bp | GACCCCTCAGATATCCCAGGTACTAAATCACCAACCAAAGAGTATACATGTGTGCAATGGTGCCACTGTTaGCTGTCACAAAAATACCAA | + |
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Preference number: 5 (lower is better) Translates to: DPSDIPGTKSPTKEYTCVQWCHC*LSQKYQ Trigger: TTGGTATTTTTGTGACAGCAAACAGTGGCACCATTG...CACACATGTATACTCTTTGGTTGGTGATTTAGTACCTGGGATATCTGAGGGGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213893.2 ENSMUST00000216767.2 |
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| CDS-3UTR CAA 90 bp | CCTGGTACATGCCATATAACTGAGGTCAATTCAAAAATCCCATACCTCATCCTAGGAAACTTGAAAAGATaGCCACTGCAAACTGTCAAC | + |
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Preference number: 5 (lower is better) Translates to: PGTCHITEVNSKIPYLILGNLKR*PLQTVN Trigger: GTTGACAGTTTGCAGTGGCAATCTTTTCAAGTTTCC...TAGGATGAGGTATGGGATTTTTGAATTGACCTCAGTTATATGGCATGTACCAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213893.2 ENSMUST00000216767.2 |
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