Pregenerated sensors for OLFR1183 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049372Ensembl transcript IDs: ENSMUST00000102618.2, ENSMUST00000213115.3, ENSMUST00000219871.2
Found 145 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAGGGCCTTGAACTTGTGAAAACCATATGTCCCAGTACAAGGGAATaGCAGAGCCAGGAAGCAGGAGTGGGTGAGTTGGGGAGCAGGGCA | + |
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Preference number: 1 (lower is better) Translates to: EGLELVKTICPSTRE*QSQEAGVGELGSRA Trigger: TGCCCTGCTCCCCAACTCACCCACTCCTGCTTCCTGGCTCTGGCATTCCCTTGTACTGGGACATATGGTTTTCACAAGTTCAAGGCCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
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| 3UTR TCA 90 bp | TTCATATCATGGCTTCTTGGCCTCTCTCCTGTCTCCTCCCATACTTaGTCCTGCTCCTCCTTTGTTCACCCCTTCCCCTCTCGCACCCAG | + |
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Preference number: 1 (lower is better) Translates to: FISWLLGLSPVSSHT*SCSSFVHPFPSRTQ Trigger: CTGGGTGCGAGAGGGGAAGGGGTGAACAAAGGAGGAGCAGGATCAAGTATGGGAGGAGACAGGAGAGAGGCCAAGAAGCCATGATATGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
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| 3UTR CCA 90 bp | GTAACCCCCATAGCTCGTGTCTCTGGCTGCATATGTAGCAGAGGATaGCCTAGTTGGCCATCAATGGGAGGAGAGGGCCTTGAACTTGTG | + |
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Preference number: 1 (lower is better) Translates to: VTPIARVSGCICSRG*PSWPSMGGEGLELV Trigger: CACAAGTTCAAGGCCCTCTCCTCCCATTGATGGCCAACTAGGCCATCCTCTGCTACATATGCAGCCAGAGACACGAGCTATGGGGGTTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
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| 3UTR TCA 90 bp | GATGGCCTAGTTGGCCATCAATGGGAGGAGAGGGCCTTGAACTTGTaGAAACCATATGTCCCAGTACAAGGGAATGCCAGAGCCAGGAAG | + |
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Preference number: 1 (lower is better) Translates to: DGLVGHQWEERALNL*KPYVPVQGNARARK Trigger: CTTCCTGGCTCTGGCATTCCCTTGTACTGGGACATATGGTTTTCACAAGTTCAAGGCCCTCTCCTCCCATTGATGGCCAACTAGGCCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
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| 3UTR CCA 90 bp | AGAAATGATGGCAGCAGCCAATGGTTGAGTACAACAGAGAGAAGTTaGAATTTTAGGATTCCTGGGCTGGAGAGGGAGAAGGGAGAGGGA | + |
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Preference number: 1 (lower is better) Translates to: RNDGSSQWLSTTERS*NFRIPGLEREKGEG Trigger: TCCCTCTCCCTTCTCCCTCTCCAGCCCAGGAATCCTAAAATTCCAACTTCTCTCTGTTGTACTCAACCATTGGCTGCTGCCATCATTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
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| 3UTR CCA 90 bp | CTTAACCCCCAACTCCAGAAGTTACCTATTCATATCATGGCTTCTTaGCCTCTCTCCTGTCTCCTCCCATACTTGATCCTGCTCCTCCTT | + |
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Preference number: 1 (lower is better) Translates to: LNPQLQKLPIHIMAS*PLSCLLPYLILLLL Trigger: AAGGAGGAGCAGGATCAAGTATGGGAGGAGACAGGAGAGAGGCCAAGAAGCCATGATATGAATAGGTAACTTCTGGAGTTGGGGGTTAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
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| 3UTR CCA 90 bp | AGAACCCTGGTACATATGCAGCAGATGTGTAGCTTAATCTCATTGTaGGTCCCCCACCAAGAGGAGCAAAGTTTCTCCCTAAAGCTGTAC | + |
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Preference number: 1 (lower is better) Translates to: RTLVHMQQMCSLISL*VPHQEEQSFSLKLY Trigger: GTACAGCTTTAGGGAGAAACTTTGCTCCTCTTGGTGGGGGACCCACAATGAGATTAAGCTACACATCTGCTGCATATGTACCAGGGTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
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| 3UTR CCA 90 bp | CTGGAAGTGGTCTCTTCAGGTTCCATATCCCTACTCTTGGCATTTTaGCTAAGGTCACCCACATTGAGTTCTAGGAACATACCACATCCC | + |
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Preference number: 1 (lower is better) Translates to: LEVVSSGSISLLLAF*LRSPTLSSRNIPHP Trigger: GGGATGTGGTATGTTCCTAGAACTCAATGTGGGTGACCTTAGCCAAAATGCCAAGAGTAGGGATATGGAACCTGAAGAGACCACTTCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
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| 3UTR TCA 90 bp | ATTATAATAGACTGTGAAAGGCTTCATGATCCCCCTAATCTTAACTaGGGATCTAGGGGCACCAAATGGCTTGCAGGGAAGGCACAGTCT | + |
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Preference number: 1 (lower is better) Translates to: IIIDCERLHDPPNLN*GSRGTKWLAGKAQS Trigger: AGACTGTGCCTTCCCTGCAAGCCATTTGGTGCCCCTAGATCCTCAGTTAAGATTAGGGGGATCATGAAGCCTTTCACAGTCTATTATAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
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| 3UTR CCA 90 bp | GAAATGCAAGGACACAGAGAGAGAGAGAGAGCAGAATCTAAGGAATaGTTTGCCCTTAGGCAAGCACCAATCCCTGCCATTAATGATATT | + |
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Preference number: 1 (lower is better) Translates to: EMQGHRERERAESKE*FALRQAPIPAINDI Trigger: AATATCATTAATGGCAGGGATTGGTGCTTGCCTAAGGGCAAACCATTCCTTAGATTCTGCTCTCTCTCTCTCTCTGTGTCCTTGCATTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
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| 3UTR TCA 90 bp | CCAAATGGCTTGCAGGGAAGGCACAGTCTGTTTTCTTTAACTGTGTaGTTTTCAGAAGTTCAAACAAGCACCAGCCAATGGCCTATAACT | + |
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Preference number: 1 (lower is better) Translates to: PNGLQGRHSLFSLTV*FSEVQTSTSQWPIT Trigger: AGTTATAGGCCATTGGCTGGTGCTTGTTTGAACTTCTGAAAATCACACAGTTAAAGAAAACAGACTGTGCCTTCCCTGCAAGCCATTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
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| 3UTR TCA 90 bp | CTTCACTGGTTCTTACCTTCTCTGAGGATGTGTGTTTCACATGAATaGAATGCAAATGATCACACATTGCTCTGGAGCATGTCTGAAAAC | + |
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Preference number: 1 (lower is better) Translates to: LHWFLPSLRMCVSHE*NANDHTLLWSMSEN Trigger: GTTTTCAGACATGCTCCAGAGCAATGTGTGATCATTTGCATTTCATTCATGTGAAACACACATCCTCAGAGAAGGTAAGAACCAGTGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
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| 3UTR GCA 90 bp | TTTTTCTTGAAATGTATATTCAAGTTGCCTAAATTTCAATTACCCTaGCCCTCCATTCCCAATGGCAACTTAAAAGACCTCCAGTTCAGA | + |
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Preference number: 1 (lower is better) Translates to: FFLKCIFKLPKFQLP*PSIPNGNLKDLQFR Trigger: TCTGAACTGGAGGTCTTTTAAGTTGCCATTGGGAATGGAGGGGCAGGGTAATTGAAATTTAGGCAACTTGAATATACATTTCAAGAAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
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| 3UTR-3UTR TCA 90 bp | TGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGTCTGGTCTGCAGAGGCTCTTATGTGGGTATaGGTGTGCGACCCATGGAAG | + |
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Preference number: 2 (lower is better) Translates to: WEAEAGGFLSSRPVWSAEALMWV*VCDPWK Trigger: CTTCCATGGGTCGCACACTCATACCCACATAAGAGC...CTCTGCAGACCAGACTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
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| 3UTR-3UTR TCA 90 bp | TGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGTCTGGTCTGCAGAGTCCAGGACACTGGAGTaGGTGTTTGCTAGCAGTAGG | + |
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Preference number: 2 (lower is better) Translates to: WEAEAGGFLSSRPVWSAESRTLE*VFASSR Trigger: CCTACTGCTAGCAAACACTCACTCCAGTGTCCTGGA...CTCTGCAGACCAGACTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
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| 3UTR-3UTR CCA 90 bp | TGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGTCTGGTCTGCAGAGGAGGATCACCTAATCTaGCCAAGGCTTGATGCACCA | + |
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Preference number: 2 (lower is better) Translates to: WEAEAGGFLSSRPVWSAEEDHLI*PRLDAP Trigger: TGGTGCATCAAGCCTTGGCCAGATTAGGTGATCCTC...CTCTGCAGACCAGACTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
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| 3UTR-3UTR TCA 90 bp | TGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGTCTGGTCTGCAGAGAGGAAAACCACAGGATaGGCAACAGAGTCAACTACC | + |
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Preference number: 2 (lower is better) Translates to: WEAEAGGFLSSRPVWSAERKTTG*ATESTT Trigger: GGTAGTTGACTCTGTTGCTCATCCTGTGGTTTTCCT...CTCTGCAGACCAGACTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
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| 3UTR-3UTR CCA 90 bp | TGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGTCTGGTCTGCAGAGCTCAGAAAATGGGAGTaGGCTGGGAAGAAGGTCTTA | + |
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Preference number: 2 (lower is better) Translates to: WEAEAGGFLSSRPVWSAELRKWE*AGKKVL Trigger: TAAGACCTTCTTCCCAGCCCACTCCCATTTTCTGAG...CTCTGCAGACCAGACTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
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| 3UTR CAA 90 bp | ATTCATATCATGGCTTCTTGGCCTCTCTCCTGTCTCCTCCCATACTaGATCCTGCTCCTCCTTTGTTCACCCCTTCCCCTCTCGCACCCA | + |
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Preference number: 2 (lower is better) Translates to: IHIMASWPLSCLLPY*ILLLLCSPLPLSHP Trigger: TGGGTGCGAGAGGGGAAGGGGTGAACAAAGGAGGAGCAGGATCAAGTATGGGAGGAGACAGGAGAGAGGCCAAGAAGCCATGATATGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
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| 3UTR-3UTR CCA 90 bp | TGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGTCTGGTCTGCAGAGAGAAAACAGATGGGCTaGAATGAGAACCCTGGTACA | + |
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Preference number: 2 (lower is better) Translates to: WEAEAGGFLSSRPVWSAERKQMG*NENPGT Trigger: TGTACCAGGGTTCTCATTCCAGCCCATCTGTTTTCT...CTCTGCAGACCAGACTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
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| 3UTR-3UTR CCA 90 bp | TGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGTCTGGTCTGCAGAGTTAACTCCAGGACACTaGAGTGAGTGTTTGCTAGCA | + |
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Preference number: 2 (lower is better) Translates to: WEAEAGGFLSSRPVWSAELTPGH*SECLLA Trigger: TGCTAGCAAACACTCACTCCAGTGTCCTGGAGTTAA...CTCTGCAGACCAGACTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
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| 3UTR-3UTR TCA 90 bp | TTTGATCCCCCTTTTAAGTGGGATTTAAGCATCCTCACTTTACCAGTGACTAGGGGAAGCAGGAGTGGGTaGGTTGGGGAGCAGGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: FDPPFKWDLSILTLPVTRGSRSG*VGEQGR Trigger: CCTGCCCTGCTCCCCAACTCACCCACTCCTGCTTCC...CCTAGTCACTGGTAAAGTGAGGATGCTTAAATCCCACTTAAAAGGGGGATCAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
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| 3UTR-3UTR GCA 90 bp | TGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGTCTGGTCTGCAGAGAGCAGTAGGAAGAATTaGAAGTGTCCATCCTTTGAG | + |
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Preference number: 2 (lower is better) Translates to: WEAEAGGFLSSRPVWSAESSRKN*KCPSFE Trigger: CTCAAAGGATGGACACTTGCAATTCTTCCTACTGCT...CTCTGCAGACCAGACTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
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| 3UTR-3UTR TCA 90 bp | TGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGTCTGGTCTGCAGAGTATAGGTGCACAACATaGAGTCAGAGAACAAATTAC | + |
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Preference number: 2 (lower is better) Translates to: WEAEAGGFLSSRPVWSAEYRCTT*SQRTNY Trigger: GTAATTTGTTCTCTGACTTCATGTTGTGCACCTATA...CTCTGCAGACCAGACTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
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| 3UTR-3UTR TCA 90 bp | TGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGTCTGGTCTGCAGAGGTTTCTACCTCTATATaGGGTTTGGATCAGATTATG | + |
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Preference number: 2 (lower is better) Translates to: WEAEAGGFLSSRPVWSAEVSTSI*GLDQIM Trigger: CATAATCTGATCCAAACCTCATATAGAGGTAGAAAC...CTCTGCAGACCAGACTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
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| 3UTR-3UTR TCA 90 bp | GAAATGCAAGGACACAGAGAGAGAGAGAGAGCAGAATCTAAGGAATGGTTTGCCAGGCAGGTGGATTTCTaGGTTCGAGGCCAGTCTGGT | + |
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Preference number: 2 (lower is better) Translates to: EMQGHRERERAESKEWFARQVDF*VRGQSG Trigger: ACCAGACTGGCCTCGAACTCAGAAATCCACCTGCCT...GGCAAACCATTCCTTAGATTCTGCTCTCTCTCTCTCTCTGTGTCCTTGCATTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
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| 3UTR-3UTR GCA 90 bp | GAAATGCAAGGACACAGAGAGAGAGAGAGAGCAGAATCTAAGGAATGGTTTGCCGAGGCCAGTCTGGTCTaGAGAGTGAGTTCCAGGACA | + |
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Preference number: 2 (lower is better) Translates to: EMQGHRERERAESKEWFAEASLV*RVSSRT Trigger: TGTCCTGGAACTCACTCTGCAGACCAGACTGGCCTC...GGCAAACCATTCCTTAGATTCTGCTCTCTCTCTCTCTCTGTGTCCTTGCATTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
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| 3UTR-3UTR CCA 90 bp | GAAATGCAAGGACACAGAGAGAGAGAGAGAGCAGAATCTAAGGAATGGTTTGCCTTAGGATTCCTGGGCTaGAGAGGGAGAAGGGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: EMQGHRERERAESKEWFALGFLG*RGRRER Trigger: CCTCTCCCTTCTCCCTCTCCAGCCCAGGAATCCTAA...GGCAAACCATTCCTTAGATTCTGCTCTCTCTCTCTCTCTGTGTCCTTGCATTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
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| 3UTR-3UTR TCA 90 bp | GAAAGAAAGAGAACAGCCACAGACAAATTTCTTGGATCTCCAAACCAAACTACACTGCCCGTAAGACACTaGGGGACCCTGCCCCCAGTT | + |
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Preference number: 2 (lower is better) Translates to: ERKRTATDKFLGSPNQTTLPVRH*GTLPPV Trigger: AACTGGGGGCAGGGTCCCTCAGTGTCTTACGGGCAG...TGTAGTTTGGTTTGGAGATCCAAGAAATTTGTCTGTGGCTGTTCTCTTTCTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
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| 3UTR-3UTR GCA 90 bp | GAAATGCAAGGACACAGAGAGAGAGAGAGAGCAGAATCTAAGGAATGGTTTGCCGCTCGTGTCTCTGGCTaGATATGTAGCAGAGGATGG | + |
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Preference number: 2 (lower is better) Translates to: EMQGHRERERAESKEWFAARVSG*ICSRGW Trigger: CCATCCTCTGCTACATATGCAGCCAGAGACACGAGC...GGCAAACCATTCCTTAGATTCTGCTCTCTCTCTCTCTCTGTGTCCTTGCATTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
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| 3UTR-3UTR CCA 90 bp | GAAAGAAAGAGAACAGCCACAGACAAATTTCTTGGATCTCCAAACCAAACTACACAGGAGTGGGTGAGTTaGGGAGCAGGGCAGGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: ERKRTATDKFLGSPNQTTQEWVS*GAGQEE Trigger: CTCCTCCTGCCCTGCTCCCCAACTCACCCACTCCTG...TGTAGTTTGGTTTGGAGATCCAAGAAATTTGTCTGTGGCTGTTCTCTTTCTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
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| 3UTR-3UTR CCA 90 bp | GAAAGAAAGAGAACAGCCACAGACAAATTTCTTGGATCTCCAAACCAAACTACAGCCAGGAAGCAGGAGTaGGTGAGTTGGGGAGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: ERKRTATDKFLGSPNQTTARKQE*VSWGAG Trigger: CCCTGCTCCCCAACTCACCCACTCCTGCTTCCTGGC...TGTAGTTTGGTTTGGAGATCCAAGAAATTTGTCTGTGGCTGTTCTCTTTCTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
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| 3UTR CAA 90 bp | ATGAGAACCCTGGTACATATGCAGCAGATGTGTAGCTTAATCTCATaGTGGGTCCCCCACCAAGAGGAGCAAAGTTTCTCCCTAAAGCTG | + |
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Preference number: 2 (lower is better) Translates to: MRTLVHMQQMCSLIS*WVPHQEEQSFSLKL Trigger: CAGCTTTAGGGAGAAACTTTGCTCCTCTTGGTGGGGGACCCACAATGAGATTAAGCTACACATCTGCTGCATATGTACCAGGGTTCTCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
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| 3UTR-3UTR GCA 90 bp | TTTGATCCCCCTTTTAAGTGGGATTTAAGCATCCTCACTTTACCAGTGACTAGGCCCAGTACAAGGGAATaGCAGAGCCAGGAAGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: FDPPFKWDLSILTLPVTRPSTRE*QSQEAG Trigger: TCCTGCTTCCTGGCTCTGGCATTCCCTTGTACTGGG...CCTAGTCACTGGTAAAGTGAGGATGCTTAAATCCCACTTAAAAGGGGGATCAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
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| 3UTR-3UTR CCA 90 bp | GAAATGCAAGGACACAGAGAGAGAGAGAGAGCAGAATCTAAGGAATGGTTTGCCGAGGATCACCTAATCTaGCCAAGGCTTGATGCACCA | + |
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Preference number: 2 (lower is better) Translates to: EMQGHRERERAESKEWFAEDHLI*PRLDAP Trigger: TGGTGCATCAAGCCTTGGCCAGATTAGGTGATCCTC...GGCAAACCATTCCTTAGATTCTGCTCTCTCTCTCTCTCTGTGTCCTTGCATTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
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| 3UTR-3UTR CCA 90 bp | TTTGATCCCCCTTTTAAGTGGGATTTAAGCATCCTCACTTTACCAGTGACTAGGCACGCAGGGCAGTGGTaGCACATGCCTTTAATCCCA | + |
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Preference number: 2 (lower is better) Translates to: FDPPFKWDLSILTLPVTRHAGQW*HMPLIP Trigger: TGGGATTAAAGGCATGTGCCACCACTGCCCTGCGTG...CCTAGTCACTGGTAAAGTGAGGATGCTTAAATCCCACTTAAAAGGGGGATCAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
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| 3UTR-3UTR CCA 90 bp | TTTGATCCCCCTTTTAAGTGGGATTTAAGCATCCTCACTTTACCAGTGACTAGGTTAGGATTCCTGGGCTaGAGAGGGAGAAGGGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: FDPPFKWDLSILTLPVTRLGFLG*RGRRER Trigger: CCTCTCCCTTCTCCCTCTCCAGCCCAGGAATCCTAA...CCTAGTCACTGGTAAAGTGAGGATGCTTAAATCCCACTTAAAAGGGGGATCAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
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| 3UTR-3UTR TCA 90 bp | GAAATGCAAGGACACAGAGAGAGAGAGAGAGCAGAATCTAAGGAATGGTTTGCCAAGCACATCAACCCGTaGCAATATCTAACGGCTCCA | + |
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Preference number: 2 (lower is better) Translates to: EMQGHRERERAESKEWFAKHINP*QYLTAP Trigger: TGGAGCCGTTAGATATTGTCACGGGTTGATGTGCTT...GGCAAACCATTCCTTAGATTCTGCTCTCTCTCTCTCTCTGTGTCCTTGCATTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
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| 3UTR-3UTR TCA 90 bp | GAAAGAAAGAGAACAGCCACAGACAAATTTCTTGGATCTCCAAACCAAACTACAGTCTGGTCTGCAGAGTaGGTTCCAGGACAGCCAGAG | + |
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Preference number: 2 (lower is better) Translates to: ERKRTATDKFLGSPNQTTVWSAE*VPGQPE Trigger: CTCTGGCTGTCCTGGAACTCACTCTGCAGACCAGAC...TGTAGTTTGGTTTGGAGATCCAAGAAATTTGTCTGTGGCTGTTCTCTTTCTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
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| 3UTR-3UTR GCA 90 bp | TTTGATCCCCCTTTTAAGTGGGATTTAAGCATCCTCACTTTACCAGTGACTAGGGCTCGTGTCTCTGGCTaGATATGTAGCAGAGGATGG | + |
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Preference number: 2 (lower is better) Translates to: FDPPFKWDLSILTLPVTRARVSG*ICSRGW Trigger: CCATCCTCTGCTACATATGCAGCCAGAGACACGAGC...CCTAGTCACTGGTAAAGTGAGGATGCTTAAATCCCACTTAAAAGGGGGATCAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
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| 3UTR-3UTR CCA 90 bp | TTTGATCCCCCTTTTAAGTGGGATTTAAGCATCCTCACTTTACCAGTGACTAGGTGTGAGGTCCCCAAATaGTCTGCCTTGTCTGGACTC | + |
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Preference number: 2 (lower is better) Translates to: FDPPFKWDLSILTLPVTRCEVPK*SALSGL Trigger: GAGTCCAGACAAGGCAGACCATTTGGGGACCTCACA...CCTAGTCACTGGTAAAGTGAGGATGCTTAAATCCCACTTAAAAGGGGGATCAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
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| 3UTR-3UTR CCA 90 bp | GAAAGAAAGAGAACAGCCACAGACAAATTTCTTGGATCTCCAAACCAAACTACACCGCACGCAGGGCAGTaGTGGCACATGCCTTTAATC | + |
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Preference number: 2 (lower is better) Translates to: ERKRTATDKFLGSPNQTTPHAGQ*WHMPLI Trigger: GATTAAAGGCATGTGCCACCACTGCCCTGCGTGCGG...TGTAGTTTGGTTTGGAGATCCAAGAAATTTGTCTGTGGCTGTTCTCTTTCTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
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| 3UTR-3UTR CCA 90 bp | GAAATGCAAGGACACAGAGAGAGAGAGAGAGCAGAATCTAAGGAATGGTTTGCCGAGAGGGGTGTAAGATaGAAGGAACAGCCATGTAAG | + |
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Preference number: 2 (lower is better) Translates to: EMQGHRERERAESKEWFAERGVR*KEQPCK Trigger: CTTACATGGCTGTTCCTTCCATCTTACACCCCTCTC...GGCAAACCATTCCTTAGATTCTGCTCTCTCTCTCTCTCTGTGTCCTTGCATTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
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| 3UTR CAA 90 bp | TTACCAGTGACTAGGCCAACTTGGGATCCATCCAATCTGCATCCATaGGGATCCCTCCAACCAATCCCTTATACTATTACTAATGCCAAG | + |
|
Preference number: 2 (lower is better) Translates to: LPVTRPTWDPSNLHP*GSLQPIPYTITNAK Trigger: CTTGGCATTAGTAATAGTATAAGGGATTGGTTGGAGGGATCCCAATGGATGCAGATTGGATGGATCCCAAGTTGGCCTAGTCACTGGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR-3UTR TCA 90 bp | GAAAGAAAGAGAACAGCCACAGACAAATTTCTTGGATCTCCAAACCAAACTACAAGGCAGGTGGATTTCTaGGTTCGAGGCCAGTCTGGT | + |
|
Preference number: 2 (lower is better) Translates to: ERKRTATDKFLGSPNQTTRQVDF*VRGQSG Trigger: ACCAGACTGGCCTCGAACTCAGAAATCCACCTGCCT...TGTAGTTTGGTTTGGAGATCCAAGAAATTTGTCTGTGGCTGTTCTCTTTCTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR-3UTR TCA 90 bp | TTTGATCCCCCTTTTAAGTGGGATTTAAGCATCCTCACTTTACCAGTGACTAGGGGGAGGAGAGGGCCTTaGACTTGTGAAAACCATATG | + |
|
Preference number: 2 (lower is better) Translates to: FDPPFKWDLSILTLPVTRGRRGP*TCENHM Trigger: CATATGGTTTTCACAAGTTCAAGGCCCTCTCCTCCC...CCTAGTCACTGGTAAAGTGAGGATGCTTAAATCCCACTTAAAAGGGGGATCAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR-3UTR TCA 90 bp | GAAAGAAAGAGAACAGCCACAGACAAATTTCTTGGATCTCCAAACCAAACTACACCTTGTACACAGAGCTaGGCAAGGCTGTCCTCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: ERKRTATDKFLGSPNQTTPCTQS*ARLSSE Trigger: CTCAGAGGACAGCCTTGCTCAGCTCTGTGTACAAGG...TGTAGTTTGGTTTGGAGATCCAAGAAATTTGTCTGTGGCTGTTCTCTTTCTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTGATCCCCCTTTTAAGTGGGATTTAAGCATCCTCACTTTACCAGTGACTAGGCAGTGTCTCAGAAAATaGGAGTGGGCTGGGAAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: FDPPFKWDLSILTLPVTRQCLRK*EWAGKK Trigger: CTTCTTCCCAGCCCACTCCCATTTTCTGAGACACTG...CCTAGTCACTGGTAAAGTGAGGATGCTTAAATCCCACTTAAAAGGGGGATCAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR-3UTR CCA 90 bp | GAAATGCAAGGACACAGAGAGAGAGAGAGAGCAGAATCTAAGGAATGGTTTGCCTTAACTCCAGGACACTaGAGTGAGTGTTTGCTAGCA | + |
|
Preference number: 2 (lower is better) Translates to: EMQGHRERERAESKEWFALTPGH*SECLLA Trigger: TGCTAGCAAACACTCACTCCAGTGTCCTGGAGTTAA...GGCAAACCATTCCTTAGATTCTGCTCTCTCTCTCTCTCTGTGTCCTTGCATTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTGATCCCCCTTTTAAGTGGGATTTAAGCATCCTCACTTTACCAGTGACTAGGCTTGATGTCCTAGAGTaGGGGAATGGGGGATTGCAA | + |
|
Preference number: 2 (lower is better) Translates to: FDPPFKWDLSILTLPVTRLDVLE*GNGGLQ Trigger: TTGCAATCCCCCATTCCCCCACTCTAGGACATCAAG...CCTAGTCACTGGTAAAGTGAGGATGCTTAAATCCCACTTAAAAGGGGGATCAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR-3UTR TCA 90 bp | TTTGATCCCCCTTTTAAGTGGGATTTAAGCATCCTCACTTTACCAGTGACTAGGAGGAAAACCACAGGATaGGCAACAGAGTCAACTACC | + |
|
Preference number: 2 (lower is better) Translates to: FDPPFKWDLSILTLPVTRRKTTG*ATESTT Trigger: GGTAGTTGACTCTGTTGCTCATCCTGTGGTTTTCCT...CCTAGTCACTGGTAAAGTGAGGATGCTTAAATCCCACTTAAAAGGGGGATCAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR-3UTR TCA 90 bp | GAAAGAAAGAGAACAGCCACAGACAAATTTCTTGGATCTCCAAACCAAACTACATCCAGGACACTGGAGTaGGTGTTTGCTAGCAGTAGG | + |
|
Preference number: 2 (lower is better) Translates to: ERKRTATDKFLGSPNQTTSRTLE*VFASSR Trigger: CCTACTGCTAGCAAACACTCACTCCAGTGTCCTGGA...TGTAGTTTGGTTTGGAGATCCAAGAAATTTGTCTGTGGCTGTTCTCTTTCTTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR-3UTR CCA 90 bp | GAAAGAAAGAGAACAGCCACAGACAAATTTCTTGGATCTCCAAACCAAACTACATGTGAGGTCCCCAAATaGTCTGCCTTGTCTGGACTC | + |
|
Preference number: 2 (lower is better) Translates to: ERKRTATDKFLGSPNQTTCEVPK*SALSGL Trigger: GAGTCCAGACAAGGCAGACCATTTGGGGACCTCACA...TGTAGTTTGGTTTGGAGATCCAAGAAATTTGTCTGTGGCTGTTCTCTTTCTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR-3UTR TCA 90 bp | ATTACCCTGCCCCTCCATTCCCAATGGCAACTTAAAAGACCTCCAGTTCAGACTTATAGGTGCACAACATaGAGTCAGAGAACAAATTAC | + |
|
Preference number: 2 (lower is better) Translates to: ITLPLHSQWQLKRPPVQTYRCTT*SQRTNY Trigger: GTAATTTGTTCTCTGACTTCATGTTGTGCACCTATA...AGTCTGAACTGGAGGTCTTTTAAGTTGCCATTGGGAATGGAGGGGCAGGGTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR-3UTR TCA 90 bp | GAAAGAAAGAGAACAGCCACAGACAAATTTCTTGGATCTCCAAACCAAACTACAGGGAGGAGAGGGCCTTaGACTTGTGAAAACCATATG | + |
|
Preference number: 2 (lower is better) Translates to: ERKRTATDKFLGSPNQTTGRRGP*TCENHM Trigger: CATATGGTTTTCACAAGTTCAAGGCCCTCTCCTCCC...TGTAGTTTGGTTTGGAGATCCAAGAAATTTGTCTGTGGCTGTTCTCTTTCTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR-3UTR GCA 90 bp | TTTGATCCCCCTTTTAAGTGGGATTTAAGCATCCTCACTTTACCAGTGACTAGGAAATTTCAATTACCCTaGCCCTCCATTCCCAATGGC | + |
|
Preference number: 2 (lower is better) Translates to: FDPPFKWDLSILTLPVTRKFQLP*PSIPNG Trigger: GCCATTGGGAATGGAGGGGCAGGGTAATTGAAATTT...CCTAGTCACTGGTAAAGTGAGGATGCTTAAATCCCACTTAAAAGGGGGATCAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR-3UTR GCA 90 bp | GAAAGAAAGAGAACAGCCACAGACAAATTTCTTGGATCTCCAAACCAAACTACAGGGGGAATGGGGGATTaGAATCCTCTCAGAAGCAAA | + |
|
Preference number: 2 (lower is better) Translates to: ERKRTATDKFLGSPNQTTGGMGD*NPLRSK Trigger: TTTGCTTCTGAGAGGATTGCAATCCCCCATTCCCCC...TGTAGTTTGGTTTGGAGATCCAAGAAATTTGTCTGTGGCTGTTCTCTTTCTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR-3UTR CCA 90 bp | GAAAGAAAGAGAACAGCCACAGACAAATTTCTTGGATCTCCAAACCAAACTACAATGGTCTGCCTTGTCTaGACTCAGTGGAAGAGGATC | + |
|
Preference number: 2 (lower is better) Translates to: ERKRTATDKFLGSPNQTTMVCLV*TQWKRI Trigger: GATCCTCTTCCACTGAGTCCAGACAAGGCAGACCAT...TGTAGTTTGGTTTGGAGATCCAAGAAATTTGTCTGTGGCTGTTCTCTTTCTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTGATCCCCCTTTTAAGTGGGATTTAAGCATCCTCACTTTACCAGTGACTAGGCAAAACTGCTTACAGTaGTATCTGCCCGTAAGACAC | + |
|
Preference number: 2 (lower is better) Translates to: FDPPFKWDLSILTLPVTRQNCLQ*YLPVRH Trigger: GTGTCTTACGGGCAGATACCACTGTAAGCAGTTTTG...CCTAGTCACTGGTAAAGTGAGGATGCTTAAATCCCACTTAAAAGGGGGATCAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR-3UTR TCA 90 bp | GAAAGAAAGAGAACAGCCACAGACAAATTTCTTGGATCTCCAAACCAAACTACAAGGGACCCTTATGGATaGGTTAGAGGAAAGGTGAAG | + |
|
Preference number: 2 (lower is better) Translates to: ERKRTATDKFLGSPNQTTRDPYG*VRGKVK Trigger: CTTCACCTTTCCTCTAACTCATCCATAAGGGTCCCT...TGTAGTTTGGTTTGGAGATCCAAGAAATTTGTCTGTGGCTGTTCTCTTTCTTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR-3UTR TCA 90 bp | GAAAGAAAGAGAACAGCCACAGACAAATTTCTTGGATCTCCAAACCAAACTACATACCCAGCAGCTGACTaGGACACATGCAGATATTCA | + |
|
Preference number: 2 (lower is better) Translates to: ERKRTATDKFLGSPNQTTYPAAD*DTCRYS Trigger: TGAATATCTGCATGTGTCTCAGTCAGCTGCTGGGTA...TGTAGTTTGGTTTGGAGATCCAAGAAATTTGTCTGTGGCTGTTCTCTTTCTTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR-3UTR GCA 90 bp | TTTGATCCCCCTTTTAAGTGGGATTTAAGCATCCTCACTTTACCAGTGACTAGGAGCAGTAGGAAGAATTaGAAGTGTCCATCCTTTGAG | + |
|
Preference number: 2 (lower is better) Translates to: FDPPFKWDLSILTLPVTRSSRKN*KCPSFE Trigger: CTCAAAGGATGGACACTTGCAATTCTTCCTACTGCT...CCTAGTCACTGGTAAAGTGAGGATGCTTAAATCCCACTTAAAAGGGGGATCAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR-3UTR CCA 90 bp | GAAAGAAAGAGAACAGCCACAGACAAATTTCTTGGATCTCCAAACCAAACTACACCCCTCCATTCCCAATaGCAACTTAAAAGACCTCCA | + |
|
Preference number: 2 (lower is better) Translates to: ERKRTATDKFLGSPNQTTPLHSQ*QLKRPP Trigger: TGGAGGTCTTTTAAGTTGCCATTGGGAATGGAGGGG...TGTAGTTTGGTTTGGAGATCCAAGAAATTTGTCTGTGGCTGTTCTCTTTCTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR-3UTR CCA 90 bp | GAAAGAAAGAGAACAGCCACAGACAAATTTCTTGGATCTCCAAACCAAACTACACTCAGAAAATGGGAGTaGGCTGGGAAGAAGGTCTTA | + |
|
Preference number: 2 (lower is better) Translates to: ERKRTATDKFLGSPNQTTLRKWE*AGKKVL Trigger: TAAGACCTTCTTCCCAGCCCACTCCCATTTTCTGAG...TGTAGTTTGGTTTGGAGATCCAAGAAATTTGTCTGTGGCTGTTCTCTTTCTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTGATCCCCCTTTTAAGTGGGATTTAAGCATCCTCACTTTACCAGTGACTAGGATCAAAGAAAACAGATaGGCTGGAATGAGAACCCTG | + |
|
Preference number: 2 (lower is better) Translates to: FDPPFKWDLSILTLPVTRIKENR*AGMRTL Trigger: CAGGGTTCTCATTCCAGCCCATCTGTTTTCTTTGAT...CCTAGTCACTGGTAAAGTGAGGATGCTTAAATCCCACTTAAAAGGGGGATCAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR-3UTR CCA 90 bp | GAAAGAAAGAGAACAGCCACAGACAAATTTCTTGGATCTCCAAACCAAACTACAGAGAGGGGTGTAAGATaGAAGGAACAGCCATGTAAG | + |
|
Preference number: 2 (lower is better) Translates to: ERKRTATDKFLGSPNQTTERGVR*KEQPCK Trigger: CTTACATGGCTGTTCCTTCCATCTTACACCCCTCTC...TGTAGTTTGGTTTGGAGATCCAAGAAATTTGTCTGTGGCTGTTCTCTTTCTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTGATCCCCCTTTTAAGTGGGATTTAAGCATCCTCACTTTACCAGTGACTAGGGATGTCAGTAGTGTGTaGCTTCTTGTCTATTGCATC | + |
|
Preference number: 2 (lower is better) Translates to: FDPPFKWDLSILTLPVTRDVSSV*LLVYCI Trigger: GATGCAATAGACAAGAAGCCACACACTACTGACATC...CCTAGTCACTGGTAAAGTGAGGATGCTTAAATCCCACTTAAAAGGGGGATCAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR-3UTR CCA 90 bp | GAAAGAAAGAGAACAGCCACAGACAAATTTCTTGGATCTCCAAACCAAACTACAACCAAAGAGCATATGTaGGCTGGTCTAAGGTCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: ERKRTATDKFLGSPNQTTTKEHM*AGLRSL Trigger: CAGAGACCTTAGACCAGCCCACATATGCTCTTTGGT...TGTAGTTTGGTTTGGAGATCCAAGAAATTTGTCTGTGGCTGTTCTCTTTCTTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR CAA 90 bp | GTTCATTATAGAAGGATAATTATGATGTCAGTAGTGTGTGGCTTCTaGTCTATTGCATCCACAGCCAGGAAGCAGAGACAGAAAACCACA | + |
|
Preference number: 2 (lower is better) Translates to: VHYRRIIMMSVVCGF*SIASTARKQRQKTT Trigger: TGTGGTTTTCTGTCTCTGCTTCCTGGCTGTGGATGCAATAGACAAGAAGCCACACACTACTGACATCATAATTATCCTTCTATAATGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR-3UTR TCA 90 bp | TTTGATCCCCCTTTTAAGTGGGATTTAAGCATCCTCACTTTACCAGTGACTAGGAATGATATTCTCTTATaGAGTGGGGTTGGCCTAATG | + |
|
Preference number: 2 (lower is better) Translates to: FDPPFKWDLSILTLPVTRNDILL*SGVGLM Trigger: CATTAGGCCAACCCCACTTCATAAGAGAATATCATT...CCTAGTCACTGGTAAAGTGAGGATGCTTAAATCCCACTTAAAAGGGGGATCAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR-3UTR GCA 90 bp | GAAAGAAAGAGAACAGCCACAGACAAATTTCTTGGATCTCCAAACCAAACTACAAAATTTCAATTACCCTaGCCCTCCATTCCCAATGGC | + |
|
Preference number: 2 (lower is better) Translates to: ERKRTATDKFLGSPNQTTKFQLP*PSIPNG Trigger: GCCATTGGGAATGGAGGGGCAGGGTAATTGAAATTT...TGTAGTTTGGTTTGGAGATCCAAGAAATTTGTCTGTGGCTGTTCTCTTTCTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR-3UTR CCA 90 bp | GAAAGAAAGAGAACAGCCACAGACAAATTTCTTGGATCTCCAAACCAAACTACAAAAATGGGAGTGGGCTaGGAAGAAGGTCTTAGTGAA | + |
|
Preference number: 2 (lower is better) Translates to: ERKRTATDKFLGSPNQTTKMGVG*EEGLSE Trigger: TTCACTAAGACCTTCTTCCCAGCCCACTCCCATTTT...TGTAGTTTGGTTTGGAGATCCAAGAAATTTGTCTGTGGCTGTTCTCTTTCTTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTGATCCCCCTTTTAAGTGGGATTTAAGCATCCTCACTTTACCAGTGACTAGGCTTGACAGGTCTCAATaGAAAAGAAGGTTCCTAATC | + |
|
Preference number: 2 (lower is better) Translates to: FDPPFKWDLSILTLPVTRLDRSQ*KRRFLI Trigger: GATTAGGAACCTTCTTTTCCATTGAGACCTGTCAAG...CCTAGTCACTGGTAAAGTGAGGATGCTTAAATCCCACTTAAAAGGGGGATCAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR-3UTR TCA 90 bp | TTTGATCCCCCTTTTAAGTGGGATTTAAGCATCCTCACTTTACCAGTGACTAGGGTTTCTACCTCTATATaGGGTTTGGATCAGATTATG | + |
|
Preference number: 2 (lower is better) Translates to: FDPPFKWDLSILTLPVTRVSTSI*GLDQIM Trigger: CATAATCTGATCCAAACCTCATATAGAGGTAGAAAC...CCTAGTCACTGGTAAAGTGAGGATGCTTAAATCCCACTTAAAAGGGGGATCAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR-3UTR CCA 90 bp | GAAAGAAAGAGAACAGCCACAGACAAATTTCTTGGATCTCCAAACCAAACTACAGATGTCAGTAGTGTGTaGCTTCTTGTCTATTGCATC | + |
|
Preference number: 2 (lower is better) Translates to: ERKRTATDKFLGSPNQTTDVSSV*LLVYCI Trigger: GATGCAATAGACAAGAAGCCACACACTACTGACATC...TGTAGTTTGGTTTGGAGATCCAAGAAATTTGTCTGTGGCTGTTCTCTTTCTTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR CAA 90 bp | AGTCAGAGAACAAATTACAGGAATTTACTTTCTACTTTAACCATGTaGGTTTCAGGGACTGTACTCAAGTCATCAGGCTTACTGGTAAGC | + |
|
Preference number: 2 (lower is better) Translates to: SQRTNYRNLLSTLTM*VSGTVLKSSGLLVS Trigger: GCTTACCAGTAAGCCTGATGACTTGAGTACAGTCCCTGAAACCAACATGGTTAAAGTAGAAAGTAAATTCCTGTAATTTGTTCTCTGACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR-3UTR TCA 90 bp | GAAAGAAAGAGAACAGCCACAGACAAATTTCTTGGATCTCCAAACCAAACTACAAATGATATTCTCTTATaGAGTGGGGTTGGCCTAATG | + |
|
Preference number: 2 (lower is better) Translates to: ERKRTATDKFLGSPNQTTNDILL*SGVGLM Trigger: CATTAGGCCAACCCCACTTCATAAGAGAATATCATT...TGTAGTTTGGTTTGGAGATCCAAGAAATTTGTCTGTGGCTGTTCTCTTTCTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR-3UTR CCA 90 bp | GAAAGAAAGAGAACAGCCACAGACAAATTTCTTGGATCTCCAAACCAAACTACAAGAATTCTGCAGGAGTaGGAACAAGATTTGGTTAAC | + |
|
Preference number: 2 (lower is better) Translates to: ERKRTATDKFLGSPNQTTRILQE*EQDLVN Trigger: GTTAACCAAATCTTGTTCCCACTCCTGCAGAATTCT...TGTAGTTTGGTTTGGAGATCCAAGAAATTTGTCTGTGGCTGTTCTCTTTCTTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR CAA 90 bp | GAAATGCAAATGATCACACATTGCTCTGGAGCATGTCTGAAAACCTaGAATGGTTTCCCATTTCTAAACAGCTGCCAAAATAATCATCTA | + |
|
Preference number: 2 (lower is better) Translates to: EMQMITHCSGACLKT*NGFPFLNSCQNNHL Trigger: TAGATGATTATTTTGGCAGCTGTTTAGAAATGGGAAACCATTCAAGGTTTTCAGACATGCTCCAGAGCAATGTGTGATCATTTGCATTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR-3UTR GCA 90 bp | GAAAGAAAGAGAACAGCCACAGACAAATTTCTTGGATCTCCAAACCAAACTACACTCCATTTTTACCCTTaGATTTCTTTTAGACAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: ERKRTATDKFLGSPNQTTLHFYP*ISFRQE Trigger: TTCCTGTCTAAAAGAAATGCAAGGGTAAAAATGGAG...TGTAGTTTGGTTTGGAGATCCAAGAAATTTGTCTGTGGCTGTTCTCTTTCTTTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR-3UTR CCA 90 bp | GAAAGAAAGAGAACAGCCACAGACAAATTTCTTGGATCTCCAAACCAAACTACAAGTGGGAACAAGATTTaGTTAACATTGGGATGTAAA | + |
|
Preference number: 2 (lower is better) Translates to: ERKRTATDKFLGSPNQTTSGNKI*LTLGCK Trigger: TTTACATCCCAATGTTAACCAAATCTTGTTCCCACT...TGTAGTTTGGTTTGGAGATCCAAGAAATTTGTCTGTGGCTGTTCTCTTTCTTTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR CCA 72 bp | CAACAGAGAGAAGTTGGAATTTTAGGATTCCTGGGCTaGAGAGGGAGAAGGGAGAGGGAGGGAGGGAGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: QQREVGILGFLG*RGRREREGGRE Trigger: CTCTCTCCCTCCCTCCCTCTCCCTTCTCCCTCTCCAGCCCAGGAATCCTAAAATTCCAACTTCTCTCTGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR TCA 72 bp | AGGCTGTCCTCTGAGGGGCTCTACCCAGCAGCTGACTaGGACACATGCAGATATTCACAGCCAAGCATTGAA | + |
|
Preference number: 3 (lower is better) Translates to: RLSSEGLYPAAD*DTCRYSQPSIE Trigger: TTCAATGCTTGGCTGTGAATATCTGCATGTGTCTCAGTCAGCTGCTGGGTAGAGCCCCTCAGAGGACAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR TCA 72 bp | CTATTACTAATGCCAAGTTGGCCTTGTACACAGAGCTaGGCAAGGCTGTCCTCTGAGGGGCTCTACCCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: LLLMPSWPCTQS*ARLSSEGLYPA Trigger: TGCTGGGTAGAGCCCCTCAGAGGACAGCCTTGCTCAGCTCTGTGTACAAGGCCAACTTGGCATTAGTAATAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR CCA 72 bp | GAGGAGGAGGAGGATCACCATGAGAGGGGTGTAAGATaGAAGGAACAGCCATGTAAGAATTCAGGAGCCGCA | + |
|
Preference number: 3 (lower is better) Translates to: EEEEDHHERGVR*KEQPCKNSGAA Trigger: TGCGGCTCCTGAATTCTTACATGGCTGTTCCTTCCATCTTACACCCCTCTCATGGTGATCCTCCTCCTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR CCA 72 bp | CCTTGTCTGGACTCAGTGGAAGAGGATCACCTAATCTaGCCAAGGCTTGATGCACCAAGATGTGAGGATACC | + |
|
Preference number: 3 (lower is better) Translates to: PCLDSVEEDHLI*PRLDAPRCEDT Trigger: GGTATCCTCACATCTTGGTGCATCAAGCCTTGGCCAGATTAGGTGATCCTCTTCCACTGAGTCCAGACAAGG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR TCA 72 bp | GTTGGCCATCAATGGGAGGAGAGGGCCTTGAACTTGTaGAAACCATATGTCCCAGTACAAGGGAATGCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: VGHQWEERALNL*KPYVPVQGNAR Trigger: TCTGGCATTCCCTTGTACTGGGACATATGGTTTTCACAAGTTCAAGGCCCTCTCCTCCCATTGATGGCCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR TCA 72 bp | GACTGTGAAAGGCTTCATGATCCCCCTAATCTTAACTaGGGATCTAGGGGCACCAAATGGCTTGCAGGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: DCERLHDPPNLN*GSRGTKWLAGK Trigger: CTTCCCTGCAAGCCATTTGGTGCCCCTAGATCCTCAGTTAAGATTAGGGGGATCATGAAGCCTTTCACAGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR CCA 72 bp | GGCAGCAGCCAATGGTTGAGTACAACAGAGAGAAGTTaGAATTTTAGGATTCCTGGGCTGGAGAGGGAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: GSSQWLSTTERS*NFRIPGLEREK Trigger: CTTCTCCCTCTCCAGCCCAGGAATCCTAAAATTCCAACTTCTCTCTGTTGTACTCAACCATTGGCTGCTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR CCA 72 bp | GGACACAGAGAGAGAGAGAGAGCAGAATCTAAGGAATaGTTTGCCCTTAGGCAAGCACCAATCCCTGCCATT | + |
|
Preference number: 3 (lower is better) Translates to: GHRERERAESKE*FALRQAPIPAI Trigger: AATGGCAGGGATTGGTGCTTGCCTAAGGGCAAACCATTCCTTAGATTCTGCTCTCTCTCTCTCTCTGTGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR CCA 72 bp | AGTTTTGTAGCTGGCTTGTTCTCACCATCCATCCACTaGGGGTCCTGTTTGACTACTGGAAGTGGTCTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: SFVAGLFSPSIH*GSCLTTGSGLF Trigger: GAAGAGACCACTTCCAGTAGTCAAACAGGACCCCCAGTGGATGGATGGTGAGAACAAGCCAGCTACAAAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAATGCAAGGACACAGAGAGAGAGAGAGAGCAGAATCTAAGGAATGGTTTGCCGAGGGTAGAGGGGCATaGTGCATAGCATTTGAAATG | + |
|
Preference number: 3 (lower is better) Translates to: EMQGHRERERAESKEWFAEGRGA*CIAFEM Trigger: CATTTCAAATGCTATGCACAATGCCCCTCTACCCTC...GGCAAACCATTCCTTAGATTCTGCTCTCTCTCTCTCTCTGTGTCCTTGCATTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR CCA 72 bp | GTACATATGCAGCAGATGTGTAGCTTAATCTCATTGTaGGTCCCCCACCAAGAGGAGCAAAGTTTCTCCCTA | + |
|
Preference number: 3 (lower is better) Translates to: VHMQQMCSLISL*VPHQEEQSFSL Trigger: TAGGGAGAAACTTTGCTCCTCTTGGTGGGGGACCCACAATGAGATTAAGCTACACATCTGCTGCATATGTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTGATCCCCCTTTTAAGTGGGATTTAAGCATCCTCACTTTACCAGTGACTAGGACCCAGGCCATGGCATaGCATTATCTACAGCTAAGG | + |
|
Preference number: 3 (lower is better) Translates to: FDPPFKWDLSILTLPVTRTQAMA*HYLQLR Trigger: CCTTAGCTGTAGATAATGCAATGCCATGGCCTGGGT...CCTAGTCACTGGTAAAGTGAGGATGCTTAAATCCCACTTAAAAGGGGGATCAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR GCA 72 bp | CCTAATCAATATAAGGTAGATCATCCCCCACAGGCATaGCCAGATGCTTATCTTCTCTGTCATCCCAGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: PNQYKVDHPPQA*PDAYLLCHPSS Trigger: AGAACTGGGATGACAGAGAAGATAAGCATCTGGGCATGCCTGTGGGGGATGATCTACCTTATATTGATTAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTGATCCCCCTTTTAAGTGGGATTTAAGCATCCTCACTTTACCAGTGACTAGGGAGGGTAGAGGGGCATaGTGCATAGCATTTGAAATG | + |
|
Preference number: 3 (lower is better) Translates to: FDPPFKWDLSILTLPVTREGRGA*CIAFEM Trigger: CATTTCAAATGCTATGCACAATGCCCCTCTACCCTC...CCTAGTCACTGGTAAAGTGAGGATGCTTAAATCCCACTTAAAAGGGGGATCAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTGATCCCCCTTTTAAGTGGGATTTAAGCATCCTCACTTTACCAGTGACTAGGAATCTAAGGAATGGTTaGCCCTTAGGCAAGCACCAA | + |
|
Preference number: 3 (lower is better) Translates to: FDPPFKWDLSILTLPVTRNLRNG*PLGKHQ Trigger: TTGGTGCTTGCCTAAGGGCAAACCATTCCTTAGATT...CCTAGTCACTGGTAAAGTGAGGATGCTTAAATCCCACTTAAAAGGGGGATCAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAAGAAAGAGAACAGCCACAGACAAATTTCTTGGATCTCCAAACCAAACTACATCCAATCTGCATCCATaGGGATCCCTCCAACCAATC | + |
|
Preference number: 3 (lower is better) Translates to: ERKRTATDKFLGSPNQTTSNLHP*GSLQPI Trigger: GATTGGTTGGAGGGATCCCAATGGATGCAGATTGGA...TGTAGTTTGGTTTGGAGATCCAAGAAATTTGTCTGTGGCTGTTCTCTTTCTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAAGAAAGAGAACAGCCACAGACAAATTTCTTGGATCTCCAAACCAAACTACATGTCTCCTCCCATACTaGATCCTGCTCCTCCTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: ERKRTATDKFLGSPNQTTCLLPY*ILLLLC Trigger: ACAAAGGAGGAGCAGGATCAAGTATGGGAGGAGACA...TGTAGTTTGGTTTGGAGATCCAAGAAATTTGTCTGTGGCTGTTCTCTTTCTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR TCA 72 bp | TTGCAGGGAAGGCACAGTCTGTTTTCTTTAACTGTGTaGTTTTCAGAAGTTCAAACAAGCACCAGCCAATGG | + |
|
Preference number: 3 (lower is better) Translates to: LQGRHSLFSLTV*FSEVQTSTSQW Trigger: CCATTGGCTGGTGCTTGTTTGAACTTCTGAAAATCACACAGTTAAAGAAAACAGACTGTGCCTTCCCTGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR TCA 72 bp | AAGAGTCTTCTGGATGAGACAGATCTGTTGCCTTCTTaGGCTCTTAGGAGTTTATGTTGTTGTTGTTGTTGT | + |
|
Preference number: 3 (lower is better) Translates to: KSLLDETDLLPS*ALRSLCCCCCC Trigger: ACAACAACAACAACAACATAAACTCCTAAGAGCTCAAGAAGGCAACAGATCTGTCTCATCCAGAAGACTCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR GCA 72 bp | AAGTATGGAAGAGTCTTCTGGATGAGACAGATCTGTTaGCTTCTTGAGCTCTTAGGAGTTTATGTTGTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: KYGRVFWMRQIC*LLELLGVYVVV Trigger: AACAACAACATAAACTCCTAAGAGCTCAAGAAGGCAACAGATCTGTCTCATCCAGAAGACTCTTCCATACTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR CCA 72 bp | TGTGTGTGTAATATTTCATCCAGTGAAGTGTCATCTTaGTCTGGTAACAGGAAACTTCTCACCTTGACAATG | + |
|
Preference number: 3 (lower is better) Translates to: CVCNISSSEVSS*SGNRKLLTLTM Trigger: CATTGTCAAGGTGAGAAGTTTCCTGTTACCAGACCAAGATGACACTTCACTGGATGAAATATTACACACACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR GCA 72 bp | CTGAAAACCTTGAATGGTTTCCCATTTCTAAACAGCTaGCAAAATAATCATCTAAGTCTGCGGATTAAGATT | + |
|
Preference number: 3 (lower is better) Translates to: LKTLNGFPFLNS*QNNHLSLRIKI Trigger: AATCTTAATCCGCAGACTTAGATGATTATTTTGGCAGCTGTTTAGAAATGGGAAACCATTCAAGGTTTTCAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR CCA 72 bp | TTAATTAGAATCTTCATAACTATAGAACCTTCCCCATaGGATGAATCTTTGATGATGCAAGTTCGCTTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: LIRIFITIEPSP*DESLMMQVRFK Trigger: CTTGAAGCGAACTTGCATCATCAAAGATTCATCCCATGGGGAAGGTTCTATAGTTATGAAGATTCTAATTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| CDS-3UTR CCA 90 bp | TGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGTCTGGTCTGCAGAGAGAGGAAAAAGTACATaGGACTCCCAAGTGTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: WEAEAGGFLSSRPVWSAERGKST*DSQVSD Trigger: GTCAGACACTTGGGAGTCCCATGTACTTTTTCCTCT...CTCTGCAGACCAGACTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| CDS-3UTR GCA 90 bp | TGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGTCTGGTCTGCAGAGGAAGACTCCAAATATTaGCTTCTGTTTTTCTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: WEAEAGGFLSSRPVWSAEEDSKY*LLFFWI Trigger: GATCCAGAAAAACAGAAGGCAATATTTGGAGTCTTC...CTCTGCAGACCAGACTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| CDS-3UTR GCA 90 bp | ATTACCCTGCCCCTCCATTCCCAATGGCAACTTAAAAGACCTCCAGTTCAGACTGCACGAAGATCTCCATaGACCCAAAGAAGTGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ITLPLHSQWQLKRPPVQTARRSP*TQRSEL Trigger: CAGCTCACTTCTTTGGGTGCATGGAGATCTTCGTGC...AGTCTGAACTGGAGGTCTTTTAAGTTGCCATTGGGAATGGAGGGGCAGGGTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR CAA 72 bp | CTGGTACATATGCAGCAGATGTGTAGCTTAATCTCATaGTGGGTCCCCCACCAAGAGGAGCAAAGTTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LVHMQQMCSLIS*WVPHQEEQSFS Trigger: GGAGAAACTTTGCTCCTCTTGGTGGGGGACCCACAATGAGATTAAGCTACACATCTGCTGCATATGTACCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| CDS-3UTR TCA 90 bp | GAAATGCAAGGACACAGAGAGAGAGAGAGAGCAGAATCTAAGGAATGGTTTGCCATCTGTGCTGAAGAGTaGATACAAGACCCTACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: EMQGHRERERAESKEWFAICAEE*IQDPTQ Trigger: CTGGGTAGGGTCTTGTATTCACTCTTCAGCACAGAT...GGCAAACCATTCCTTAGATTCTGCTCTCTCTCTCTCTCTGTGTCCTTGCATTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| CDS-3UTR CCA 90 bp | GAAATGCAAGGACACAGAGAGAGAGAGAGAGCAGAATCTAAGGAATGGTTTGCCTGTCTATTGGGAAGGTaGTTGGTGGGCGTGTGTATA | + |
|
Preference number: 4 (lower is better) Translates to: EMQGHRERERAESKEWFACLLGR*LVGVCI Trigger: TATACACACGCCCACCAACCACCTTCCCAATAGACA...GGCAAACCATTCCTTAGATTCTGCTCTCTCTCTCTCTCTGTGTCCTTGCATTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| CDS-3UTR CCA 90 bp | TTTGATCCCCCTTTTAAGTGGGATTTAAGCATCCTCACTTTACCAGTGACTAGGCACCATCTTGTCTATTaGGAAGGTGGTTGGTGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: FDPPFKWDLSILTLPVTRHHLVY*EGGWWA Trigger: CGCCCACCAACCACCTTCCCAATAGACAAGATGGTG...CCTAGTCACTGGTAAAGTGAGGATGCTTAAATCCCACTTAAAAGGGGGATCAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR CAA 72 bp | CTCCAACCAATCCCTTATACTATTACTAATGCCAAGTaGGCCTTGTACACAGAGCTGAGCAAGGCTGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LQPIPYTITNAK*ALYTELSKAVL Trigger: GAGGACAGCCTTGCTCAGCTCTGTGTACAAGGCCAACTTGGCATTAGTAATAGTATAAGGGATTGGTTGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR CAA 72 bp | TCCCTACTCTTGGCATTTTGGCTAAGGTCACCCACATaGAGTTCTAGGAACATACCACATCCCAGGTCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: SLLLAFWLRSPT*SSRNIPHPRSL Trigger: TAGAGACCTGGGATGTGGTATGTTCCTAGAACTCAATGTGGGTGACCTTAGCCAAAATGCCAAGAGTAGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR CAA 72 bp | CTGGAAGTGGTCTCTTCAGGTTCCATATCCCTACTCTaGGCATTTTGGCTAAGGTCACCCACATTGAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LEVVSSGSISLL*AFWLRSPTLSS Trigger: AGAACTCAATGTGGGTGACCTTAGCCAAAATGCCAAGAGTAGGGATATGGAACCTGAAGAGACCACTTCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| CDS-3UTR GCA 90 bp | GAAATGCAAGGACACAGAGAGAGAGAGAGAGCAGAATCTAAGGAATGGTTTGCCCCCAAAGAAGTGAGCTaGAAAGACCTGAGTCATACA | + |
|
Preference number: 4 (lower is better) Translates to: EMQGHRERERAESKEWFAPKEVS*KDLSHT Trigger: TGTATGACTCAGGTCTTTGCAGCTCACTTCTTTGGG...GGCAAACCATTCCTTAGATTCTGCTCTCTCTCTCTCTCTGTGTCCTTGCATTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| CDS-3UTR CCA 90 bp | GAAATGCAAGGACACAGAGAGAGAGAGAGAGCAGAATCTAAGGAATGGTTTGCCAGAGGAAAAAGTACATaGGACTCCCAAGTGTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: EMQGHRERERAESKEWFARGKST*DSQVSD Trigger: GTCAGACACTTGGGAGTCCCATGTACTTTTTCCTCT...GGCAAACCATTCCTTAGATTCTGCTCTCTCTCTCTCTCTGTGTCCTTGCATTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| CDS-3UTR CCA 90 bp | ATTACCCTGCCCCTCCATTCCCAATGGCAACTTAAAAGACCTCCAGTTCAGACTTGGGAAGGTGGTTGGTaGGCGTGTGTATATAAATAT | + |
|
Preference number: 4 (lower is better) Translates to: ITLPLHSQWQLKRPPVQTWEGGW*ACVYKY Trigger: ATATTTATATACACACGCCCACCAACCACCTTCCCA...AGTCTGAACTGGAGGTCTTTTAAGTTGCCATTGGGAATGGAGGGGCAGGGTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR CAA 72 bp | ACTAGGCCAACTTGGGATCCATCCAATCTGCATCCATaGGGATCCCTCCAACCAATCCCTTATACTATTACT | + |
|
Preference number: 4 (lower is better) Translates to: TRPTWDPSNLHP*GSLQPIPYTIT Trigger: AGTAATAGTATAAGGGATTGGTTGGAGGGATCCCAATGGATGCAGATTGGATGGATCCCAAGTTGGCCTAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR CAA 72 bp | CTAATCTTAACTGAGGATCTAGGGGCACCAAATGGCTaGCAGGGAAGGCACAGTCTGTTTTCTTTAACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LILTEDLGAPNG*QGRHSLFSLTV Trigger: CACAGTTAAAGAAAACAGACTGTGCCTTCCCTGCAAGCCATTTGGTGCCCCTAGATCCTCAGTTAAGATTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| CDS-3UTR CCA 90 bp | GAAAGAAAGAGAACAGCCACAGACAAATTTCTTGGATCTCCAAACCAAACTACACACCATCTTGTCTATTaGGAAGGTGGTTGGTGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: ERKRTATDKFLGSPNQTTHHLVY*EGGWWA Trigger: CGCCCACCAACCACCTTCCCAATAGACAAGATGGTG...TGTAGTTTGGTTTGGAGATCCAAGAAATTTGTCTGTGGCTGTTCTCTTTCTTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR CAA 72 bp | AGAAGGATAATTATGATGTCAGTAGTGTGTGGCTTCTaGTCTATTGCATCCACAGCCAGGAAGCAGAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: RRIIMMSVVCGF*SIASTARKQRQ Trigger: CTGTCTCTGCTTCCTGGCTGTGGATGCAATAGACAAGAAGCCACACACTACTGACATCATAATTATCCTTCT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR CAA 72 bp | GGAGGGAAAGAAAGAGAACAGCCACAGACAAATTTCTaGGATCTCCAAACCAAACTACAGTACTTAGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GGKEREQPQTNF*DLQTKLQYLVA Trigger: GGCCACTAAGTACTGTAGTTTGGTTTGGAGATCCAAGAAATTTGTCTGTGGCTGTTCTCTTTCTTTCCCTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| 3UTR CAA 72 bp | TCAGGGCCTCACTATGTAGCCAATCTGCTATCAAGCTaGCAAACCTTCTGCCTTATTTATCTGAGAGTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SGPHYVANLLSS*QTFCLIYLRVS Trigger: GCTAACTCTCAGATAAATAAGGCAGAAGGTTTGCAAGCTTGATAGCAGATTGGCTACATAGTGAGGCCCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| CDS-3UTR GCA 90 bp | ATTACCCTGCCCCTCCATTCCCAATGGCAACTTAAAAGACCTCCAGTTCAGACTGAAGACTCCAAATATTaGCTTCTGTTTTTCTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: ITLPLHSQWQLKRPPVQTEDSKY*LLFFWI Trigger: GATCCAGAAAAACAGAAGGCAATATTTGGAGTCTTC...AGTCTGAACTGGAGGTCTTTTAAGTTGCCATTGGGAATGGAGGGGCAGGGTAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| CDS-3UTR GCA 90 bp | GAAAGAAAGAGAACAGCCACAGACAAATTTCTTGGATCTCCAAACCAAACTACAGCACGAAGATCTCCATaGACCCAAAGAAGTGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ERKRTATDKFLGSPNQTTARRSP*TQRSEL Trigger: CAGCTCACTTCTTTGGGTGCATGGAGATCTTCGTGC...TGTAGTTTGGTTTGGAGATCCAAGAAATTTGTCTGTGGCTGTTCTCTTTCTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| CDS-3UTR GCA 90 bp | ATTACCCTGCCCCTCCATTCCCAATGGCAACTTAAAAGACCTCCAGTTCAGACTCAAGAATCACTAATATaGCACAAATACGTTGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ITLPLHSQWQLKRPPVQTQESLI*HKYVGS Trigger: TGAGCCAACGTATTTGTGGCATATTAGTGATTCTTG...AGTCTGAACTGGAGGTCTTTTAAGTTGCCATTGGGAATGGAGGGGCAGGGTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| CDS-3UTR CCA 90 bp | ATTACCCTGCCCCTCCATTCCCAATGGCAACTTAAAAGACCTCCAGTTCAGACTTGCCTTCTGTTTTTCTaGATCCTCATTCAGGATAAT | + |
|
Preference number: 4 (lower is better) Translates to: ITLPLHSQWQLKRPPVQTCLLFF*ILIQDN Trigger: ATTATCCTGAATGAGGATCCAGAAAAACAGAAGGCA...AGTCTGAACTGGAGGTCTTTTAAGTTGCCATTGGGAATGGAGGGGCAGGGTAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000213115.3 |
||
| 3UTR CAA 72 bp | TGGGGTTGGCCTAATGCTTATGTTATAATGTTAAGTTaGTGCCTCAAAACTGCTTACAGTGGTATCTGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: WGWPNAYVIMLS*CLKTAYSGICP Trigger: CGGGCAGATACCACTGTAAGCAGTTTTGAGGCACAAACTTAACATTATAACATAAGCATTAGGCCAACCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| CDS-3UTR TCA 90 bp | GAAAGAAAGAGAACAGCCACAGACAAATTTCTTGGATCTCCAAACCAAACTACAATCTGTGCTGAAGAGTaGATACAAGACCCTACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ERKRTATDKFLGSPNQTTICAEE*IQDPTQ Trigger: CTGGGTAGGGTCTTGTATTCACTCTTCAGCACAGAT...TGTAGTTTGGTTTGGAGATCCAAGAAATTTGTCTGTGGCTGTTCTCTTTCTTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| CDS-3UTR TCA 90 bp | TTTGATCCCCCTTTTAAGTGGGATTTAAGCATCCTCACTTTACCAGTGACTAGGCTTCCTTCTACACTGTaGTTTCTCAGAGAGTATAAG | + |
|
Preference number: 4 (lower is better) Translates to: FDPPFKWDLSILTLPVTRLPSTL*FLREYK Trigger: CTTATACTCTCTGAGAAATCACAGTGTAGAAGGAAG...CCTAGTCACTGGTAAAGTGAGGATGCTTAAATCCCACTTAAAAGGGGGATCAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| CDS-3UTR GCA 90 bp | GAAAGAAAGAGAACAGCCACAGACAAATTTCTTGGATCTCCAAACCAAACTACAGAGAGGCTTACAAATTaGTACATAGCGGTCAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: ERKRTATDKFLGSPNQTTERLTN*YIAVNG Trigger: GCCATTGACCGCTATGTAGCAATTTGTAAGCCTCTC...TGTAGTTTGGTTTGGAGATCCAAGAAATTTGTCTGTGGCTGTTCTCTTTCTTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
||
| CDS-3UTR CCA 90 bp | GAAAGAAAGAGAACAGCCACAGACAAATTTCTTGGATCTCCAAACCAAACTACATGGGAAGGTGGTTGGTaGGCGTGTGTATATAAATAT | + |
|
Preference number: 4 (lower is better) Translates to: ERKRTATDKFLGSPNQTTWEGGW*ACVYKY Trigger: ATATTTATATACACACGCCCACCAACCACCTTCCCA...TGTAGTTTGGTTTGGAGATCCAAGAAATTTGTCTGTGGCTGTTCTCTTTCTTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
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| 3UTR CAA 72 bp | CTTTTTATTCAGTTCAAAAGAACCCAGGCCATGGCATaGCATTATCTACAGCTAAGGTATGTCTTCCTACCT | + |
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Preference number: 4 (lower is better) Translates to: LFIQFKRTQAMA*HYLQLRYVFLP Trigger: AGGTAGGAAGACATACCTTAGCTGTAGATAATGCAATGCCATGGCCTGGGTTCTTTTGAACTGAATAAAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
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| 3UTR CAA 72 bp | ACATTCAACATTACAGTTGCAATTTCTACATTTCAGTaGAGTACGCTAGATTTTGATGGAGGCCACCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: TFNITVAISTFQ*STLDFDGGHLL Trigger: CAGAAGGTGGCCTCCATCAAAATCTAGCGTACTCAACTGAAATGTAGAAATTGCAACTGTAATGTTGAATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
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| 3UTR CAA 72 bp | GTGTCATCTTGGTCTGGTAACAGGAAACTTCTCACCTaGACAATGTCCTATTATTATTGTTGGTTATTGAGA | + |
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Preference number: 4 (lower is better) Translates to: VSSWSGNRKLLT*TMSYYYCWLLR Trigger: TCTCAATAACCAACAATAATAATAGGACATTGTCAAGGTGAGAAGTTTCCTGTTACCAGACCAAGATGACAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
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| 3UTR CAA 72 bp | ACAAATTACAGGAATTTACTTTCTACTTTAACCATGTaGGTTTCAGGGACTGTACTCAAGTCATCAGGCTTA | + |
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Preference number: 4 (lower is better) Translates to: TNYRNLLSTLTM*VSGTVLKSSGL Trigger: TAAGCCTGATGACTTGAGTACAGTCCCTGAAACCAACATGGTTAAAGTAGAAAGTAAATTCCTGTAATTTGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
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| 3UTR CAA 72 bp | AAGTCAACACAGAAAGTCCTCTTTCCTCTCAGTATTTaGGTACTCATAGACTTTAATAAGTTAACCCATTCC | + |
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Preference number: 4 (lower is better) Translates to: KSTQKVLFPLSI*VLIDFNKLTHS Trigger: GGAATGGGTTAACTTATTAAAGTCTATGAGTACCAAAATACTGAGAGGAAAGAGGACTTTCTGTGTTGACTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
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| CDS-3UTR CAA 90 bp | GAAATGCAAGGACACAGAGAGAGAGAGAGAGCAGAATCTAAGGAATGGTTTGCCACACCATCTTGTCTATaGGGAAGGTGGTTGGTGGGC | + |
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Preference number: 5 (lower is better) Translates to: EMQGHRERERAESKEWFATPSCL*GRWLVG Trigger: GCCCACCAACCACCTTCCCAATAGACAAGATGGTGT...GGCAAACCATTCCTTAGATTCTGCTCTCTCTCTCTCTCTGTGTCCTTGCATTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
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| CDS-3UTR CAA 90 bp | GAAAGAAAGAGAACAGCCACAGACAAATTTCTTGGATCTCCAAACCAAACTACAACACCATCTTGTCTATaGGGAAGGTGGTTGGTGGGC | + |
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Preference number: 5 (lower is better) Translates to: ERKRTATDKFLGSPNQTTTPSCL*GRWLVG Trigger: GCCCACCAACCACCTTCCCAATAGACAAGATGGTGT...TGTAGTTTGGTTTGGAGATCCAAGAAATTTGTCTGTGGCTGTTCTCTTTCTTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
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| CDS-3UTR CAA 90 bp | ATTACCCTGCCCCTCCATTCCCAATGGCAACTTAAAAGACCTCCAGTTCAGACTAGAAGACTCCAAATATaGCCTTCTGTTTTTCTGGAT | + |
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Preference number: 5 (lower is better) Translates to: ITLPLHSQWQLKRPPVQTRRLQI*PSVFLD Trigger: ATCCAGAAAAACAGAAGGCAATATTTGGAGTCTTCT...AGTCTGAACTGGAGGTCTTTTAAGTTGCCATTGGGAATGGAGGGGCAGGGTAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
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| CDS CCA 90 bp | CAAGACCCTACCCAGGCAAGAATCACTAATATGCCACAAATACGTTaGCTCATTATAGTTGTATATCTGAGAGGCTTACAAATTGCTACA | + |
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Preference number: 5 (lower is better) Translates to: QDPTQARITNMPQIR*LIIVVYLRGLQIAT Trigger: TGTAGCAATTTGTAAGCCTCTCAGATATACAACTATAATGAGCCAACGTATTTGTGGCATATTAGTGATTCTTGCCTGGGTAGGGTCTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102618.2 ENSMUST00000213115.3 ENSMUST00000219871.2 |
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| CDS-3UTR CAA 90 bp | TTTGATCCCCCTTTTAAGTGGGATTTAAGCATCCTCACTTTACCAGTGACTAGGAGAAGACTCCAAATATaGCCTTCTGTTTTTCTGGAT | + |
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Preference number: 5 (lower is better) Translates to: FDPPFKWDLSILTLPVTRRRLQI*PSVFLD Trigger: ATCCAGAAAAACAGAAGGCAATATTTGGAGTCTTCT...CCTAGTCACTGGTAAAGTGAGGATGCTTAAATCCCACTTAAAAGGGGGATCAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000213115.3 ENSMUST00000219871.2 |
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| CDS TCA 72 bp | GGTAATCTTAAGGCTAAGAAAATCTGTGCTGAAGAGTaGATACAAGACCCTACCCAGGCAAGAATCACTAAT | + |
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Preference number: 6 (lower is better) Translates to: GNLKAKKICAEE*IQDPTQARITN Trigger: ATTAGTGATTCTTGCCTGGGTAGGGTCTTGTATTCACTCTTCAGCACAGATTTTCTTAGCCTTAAGATTACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102618.2 ENSMUST00000213115.3 ENSMUST00000219871.2 |
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| CDS CCA 72 bp | ACCCAGGCAAGAATCACTAATATGCCACAAATACGTTaGCTCATTATAGTTGTATATCTGAGAGGCTTACAA | + |
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Preference number: 6 (lower is better) Translates to: TQARITNMPQIR*LIIVVYLRGLQ Trigger: TTGTAAGCCTCTCAGATATACAACTATAATGAGCCAACGTATTTGTGGCATATTAGTGATTCTTGCCTGGGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102618.2 ENSMUST00000213115.3 ENSMUST00000219871.2 |
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