Pregenerated sensors for OLFR1182 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000090097Ensembl transcript IDs: ENSMUST00000126038.4, ENSMUST00000179450.9
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAACAAATCAGAAGAACGGGAGGAGGCTCCCAAGAGGGCTGGGGGTaGGTGTTTGGGAGAACTGTGTGTATCAAAAGACTGCAATGCATA | + |
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Preference number: 1 (lower is better) Translates to: KQIRRTGGGSQEGWG*VFGRTVCIKRLQCI Trigger: TATGCATTGCAGTCTTTTGATACACACAGTTCTCCCAAACACCCACCCCCAGCCCTCTTGGGAGCCTCCTCCCGTTCTTCTGATTTGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000126038.4 ENSMUST00000179450.9 |
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| 3UTR TCA 90 bp | ATATTTATAAGTAGGCAAGCTAGCAGCTCTCAGGTGAATTCAAGATaGGCATTTGTTGTCAGAATCACTCAAATTCTCTCTCTTTTTCCA | + |
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Preference number: 1 (lower is better) Translates to: IFISRQASSSQVNSR*AFVVRITQILSLFP Trigger: TGGAAAAAGAGAGAGAATTTGAGTGATTCTGACAACAAATGCTCATCTTGAATTCACCTGAGAGCTGCTAGCTTGCCTACTTATAAATAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000126038.4 ENSMUST00000179450.9 |
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| 3UTR-3UTR CCA 90 bp | ATGTATATAGGTCAGCGACAGCTGACCCTAGGCAATGATCACTTGAGTAATATTGGCTCCCAAGAGGGCTaGGGGTGGGTGTTTGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: MYIGQRQLTLGNDHLSNIGSQEG*GWVFGR Trigger: TCTCCCAAACACCCACCCCCAGCCCTCTTGGGAGCC...AATATTACTCAAGTGATCATTGCCTAGGGTCAGCTGTCGCTGACCTATATACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126038.4 ENSMUST00000179450.9 |
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| 3UTR-3UTR CCA 90 bp | GAGAGAAAGTTTACAAATTTGCCATTCTGGAGCACGGCCCATTGTCTATACATCCAAGAGGGCTGGGGGTaGGTGTTTGGGAGAACTGTG | + |
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Preference number: 2 (lower is better) Translates to: ERKFTNLPFWSTAHCLYIQEGWG*VFGRTV Trigger: CACAGTTCTCCCAAACACCCACCCCCAGCCCTCTTG...GATGTATAGACAATGGGCCGTGCTCCAGAATGGCAAATTTGTAAACTTTCTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000126038.4 ENSMUST00000179450.9 |
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| 3UTR-3UTR CCA 90 bp | TTGGTTGAGAAACCACTGCTTGATTTTTCTTACCACGAAATAAATCATGAAGACGGCTCCCAAGAGGGCTaGGGGTGGGTGTTTGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: LVEKPLLDFSYHEINHEDGSQEG*GWVFGR Trigger: TCTCCCAAACACCCACCCCCAGCCCTCTTGGGAGCC...GTCTTCATGATTTATTTCGTGGTAAGAAAAATCAAGCAGTGGTTTCTCAACCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000126038.4 ENSMUST00000179450.9 |
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| 3UTR-3UTR CCA 90 bp | AATGGCAAAGTAGAAGAAGACACAAAATTGTCCCTAACAAAGACACTATTTCCTCAAGAGGGCTGGGGGTaGGTGTTTGGGAGAACTGTG | + |
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Preference number: 2 (lower is better) Translates to: NGKVEEDTKLSLTKTLFPQEGWG*VFGRTV Trigger: CACAGTTCTCCCAAACACCCACCCCCAGCCCTCTTG...AGGAAATAGTGTCTTTGTTAGGGACAATTTTGTGTCTTCTTCTACTTTGCCATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000126038.4 ENSMUST00000179450.9 |
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| 3UTR-3UTR TCA 90 bp | GAGAGAAAGTTTACAAATTTGCCATTCTGGAGCACGGCCCATTGTCTATACATCGACACTATTTCCTACTaGTACCTGATGCGAAAGGGA | + |
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Preference number: 2 (lower is better) Translates to: ERKFTNLPFWSTAHCLYIDTISY*YLMRKG Trigger: TCCCTTTCGCATCAGGTATCAGTAGGAAATAGTGTC...GATGTATAGACAATGGGCCGTGCTCCAGAATGGCAAATTTGTAAACTTTCTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126038.4 ENSMUST00000179450.9 |
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| 3UTR-3UTR CCA 90 bp | GAGAGAAAGTTTACAAATTTGCCATTCTGGAGCACGGCCCATTGTCTATACATCGAACATGCATTTGAGTaGGTAGAGAGGCAAGGAAGT | + |
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Preference number: 2 (lower is better) Translates to: ERKFTNLPFWSTAHCLYIEHAFE*VERQGS Trigger: ACTTCCTTGCCTCTCTACCCACTCAAATGCATGTTC...GATGTATAGACAATGGGCCGTGCTCCAGAATGGCAAATTTGTAAACTTTCTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126038.4 ENSMUST00000179450.9 |
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| 3UTR-3UTR TCA 90 bp | TCACTGAGTATTTTAACTATACAACAGGATAAGCCCCATTCCTATGAGAAGTTAGGGAGAACATGCATTTaGGTGGGTAGAGAGGCAAGG | + |
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Preference number: 2 (lower is better) Translates to: SLSILTIQQDKPHSYEKLGRTCI*VGREAR Trigger: CCTTGCCTCTCTACCCACTCAAATGCATGTTCTCCC...TAACTTCTCATAGGAATGGGGCTTATCCTGTTGTATAGTTAAAATACTCAGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000126038.4 ENSMUST00000179450.9 |
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| 3UTR-3UTR TCA 90 bp | TTGGTTGAGAAACCACTGCTTGATTTTTCTTACCACGAAATAAATCATGAAGACGGGAGAACATGCATTTaGGTGGGTAGAGAGGCAAGG | + |
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Preference number: 2 (lower is better) Translates to: LVEKPLLDFSYHEINHEDGRTCI*VGREAR Trigger: CCTTGCCTCTCTACCCACTCAAATGCATGTTCTCCC...GTCTTCATGATTTATTTCGTGGTAAGAAAAATCAAGCAGTGGTTTCTCAACCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000126038.4 ENSMUST00000179450.9 |
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| 3UTR-3UTR TCA 90 bp | ATGTATATAGGTCAGCGACAGCTGACCCTAGGCAATGATCACTTGAGTAATATTGAGCTGATATACAACTaGAGTCACAGAGAGTATGAG | + |
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Preference number: 2 (lower is better) Translates to: MYIGQRQLTLGNDHLSNIELIYN*SHREYE Trigger: CTCATACTCTCTGTGACTTCAGTTGTATATCAGCTC...AATATTACTCAAGTGATCATTGCCTAGGGTCAGCTGTCGCTGACCTATATACAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126038.4 ENSMUST00000179450.9 |
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| 3UTR-3UTR TCA 90 bp | GAGAGAAAGTTTACAAATTTGCCATTCTGGAGCACGGCCCATTGTCTATACATCGGAATTTGGGACAAATaGAGGCAATGGAATACATGT | + |
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Preference number: 2 (lower is better) Translates to: ERKFTNLPFWSTAHCLYIGIWDK*RQWNTC Trigger: ACATGTATTCCATTGCCTTCATTTGTCCCAAATTCC...GATGTATAGACAATGGGCCGTGCTCCAGAATGGCAAATTTGTAAACTTTCTCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126038.4 ENSMUST00000179450.9 |
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| 3UTR-3UTR TCA 90 bp | ATGTATATAGGTCAGCGACAGCTGACCCTAGGCAATGATCACTTGAGTAATATTCCACCTTTCACAGAATaGTTTGTTTCAGAGACTCAT | + |
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Preference number: 2 (lower is better) Translates to: MYIGQRQLTLGNDHLSNIPPFTE*FVSETH Trigger: ATGAGTCTCTGAAACAAATCATTCTGTGAAAGGTGG...AATATTACTCAAGTGATCATTGCCTAGGGTCAGCTGTCGCTGACCTATATACAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126038.4 ENSMUST00000179450.9 |
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| 3UTR-3UTR TCA 90 bp | TTGGTTGAGAAACCACTGCTTGATTTTTCTTACCACGAAATAAATCATGAAGACAAGTCACAGAGAGTATaGGAGCAAGTCACCACCTAT | + |
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Preference number: 2 (lower is better) Translates to: LVEKPLLDFSYHEINHEDKSQRV*EQVTTY Trigger: ATAGGTGGTGACTTGCTCTCATACTCTCTGTGACTT...GTCTTCATGATTTATTTCGTGGTAAGAAAAATCAAGCAGTGGTTTCTCAACCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000126038.4 ENSMUST00000179450.9 |
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| 3UTR-3UTR TCA 90 bp | TTGGTTGAGAAACCACTGCTTGATTTTTCTTACCACGAAATAAATCATGAAGACCCACCTTTCACAGAATaGTTTGTTTCAGAGACTCAT | + |
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Preference number: 2 (lower is better) Translates to: LVEKPLLDFSYHEINHEDPPFTE*FVSETH Trigger: ATGAGTCTCTGAAACAAATCATTCTGTGAAAGGTGG...GTCTTCATGATTTATTTCGTGGTAAGAAAAATCAAGCAGTGGTTTCTCAACCAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000126038.4 ENSMUST00000179450.9 |
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| 3UTR-3UTR TCA 90 bp | TTGGTTGAGAAACCACTGCTTGATTTTTCTTACCACGAAATAAATCATGAAGACTTTCCTACTGATACCTaGTGCGAAAGGGAAAATTTG | + |
|
Preference number: 2 (lower is better) Translates to: LVEKPLLDFSYHEINHEDFPTDT*CERENL Trigger: CAAATTTTCCCTTTCGCATCAGGTATCAGTAGGAAA...GTCTTCATGATTTATTTCGTGGTAAGAAAAATCAAGCAGTGGTTTCTCAACCAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000126038.4 ENSMUST00000179450.9 |
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| 3UTR-3UTR TCA 90 bp | TTGGTTGAGAAACCACTGCTTGATTTTTCTTACCACGAAATAAATCATGAAGACGATTATATGATGAAGTaGTCACAGTTAGACCCTAGG | + |
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Preference number: 2 (lower is better) Translates to: LVEKPLLDFSYHEINHEDDYMMK*SQLDPR Trigger: CCTAGGGTCTAACTGTGATCACTTCATCATATAATC...GTCTTCATGATTTATTTCGTGGTAAGAAAAATCAAGCAGTGGTTTCTCAACCAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000126038.4 ENSMUST00000179450.9 |
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| 3UTR-3UTR TCA 90 bp | GGACATATTTCCAGGATATTAGAAGAGACATGCTGTGCTATAGAAAAAGGAATGCACATACATGAAAGCTaGAGTGGAATATCCAGAATA | + |
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Preference number: 2 (lower is better) Translates to: GHISRILEETCCAIEKGMHIHES*SGISRI Trigger: TATTCTGGATATTCCACTTCAGCTTTCATGTATGTG...CATTCCTTTTTCTATAGCACAGCATGTCTCTTCTAATATCCTGGAAATATGTCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000126038.4 ENSMUST00000179450.9 |
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| 3UTR-3UTR GCA 90 bp | TTGGTTGAGAAACCACTGCTTGATTTTTCTTACCACGAAATAAATCATGAAGACAGAAGAGACATGCTGTaGTATAGAAAAAGGAATGAA | + |
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Preference number: 2 (lower is better) Translates to: LVEKPLLDFSYHEINHEDRRDML*YRKRNE Trigger: TTCATTCCTTTTTCTATAGCACAGCATGTCTCTTCT...GTCTTCATGATTTATTTCGTGGTAAGAAAAATCAAGCAGTGGTTTCTCAACCAA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000126038.4 ENSMUST00000179450.9 |
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| 3UTR CCA 72 bp | AGAAGAACGGGAGGAGGCTCCCAAGAGGGCTGGGGGTaGGTGTTTGGGAGAACTGTGTGTATCAAAAGACTG | + |
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Preference number: 3 (lower is better) Translates to: RRTGGGSQEGWG*VFGRTVCIKRL Trigger: CAGTCTTTTGATACACACAGTTCTCCCAAACACCCACCCCCAGCCCTCTTGGGAGCCTCCTCCCGTTCTTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000126038.4 ENSMUST00000179450.9 |
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| 3UTR CCA 72 bp | CAAATCAGAAGAACGGGAGGAGGCTCCCAAGAGGGCTaGGGGTGGGTGTTTGGGAGAACTGTGTGTATCAAA | + |
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Preference number: 3 (lower is better) Translates to: QIRRTGGGSQEG*GWVFGRTVCIK Trigger: TTTGATACACACAGTTCTCCCAAACACCCACCCCCAGCCCTCTTGGGAGCCTCCTCCCGTTCTTCTGATTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126038.4 ENSMUST00000179450.9 |
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| 3UTR-3UTR CAA 90 bp | GAGAGAAAGTTTACAAATTTGCCATTCTGGAGCACGGCCCATTGTCTATACATCGCTGGGGGTGGGTGTTaGGGAGAACTGTGTGTATCA | + |
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Preference number: 3 (lower is better) Translates to: ERKFTNLPFWSTAHCLYIAGGGC*GELCVS Trigger: TGATACACACAGTTCTCCCAAACACCCACCCCCAGC...GATGTATAGACAATGGGCCGTGCTCCAGAATGGCAAATTTGTAAACTTTCTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000126038.4 ENSMUST00000179450.9 |
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| 3UTR-3UTR CAA 90 bp | GGACATATTTCCAGGATATTAGAAGAGACATGCTGTGCTATAGAAAAAGGAATGGCTGGGGGTGGGTGTTaGGGAGAACTGTGTGTATCA | + |
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Preference number: 3 (lower is better) Translates to: GHISRILEETCCAIEKGMAGGGC*GELCVS Trigger: TGATACACACAGTTCTCCCAAACACCCACCCCCAGC...CATTCCTTTTTCTATAGCACAGCATGTCTCTTCTAATATCCTGGAAATATGTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000126038.4 ENSMUST00000179450.9 |
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| 3UTR TCA 72 bp | AGTAGGCAAGCTAGCAGCTCTCAGGTGAATTCAAGATaGGCATTTGTTGTCAGAATCACTCAAATTCTCTCT | + |
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Preference number: 3 (lower is better) Translates to: SRQASSSQVNSR*AFVVRITQILS Trigger: AGAGAGAATTTGAGTGATTCTGACAACAAATGCTCATCTTGAATTCACCTGAGAGCTGCTAGCTTGCCTACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126038.4 ENSMUST00000179450.9 |
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| 3UTR TCA 72 bp | AATCACCATTCAGAAACAATAGAGCTGATATACAACTaGAGTCACAGAGAGTATGAGAGCAAGTCACCACCT | + |
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Preference number: 3 (lower is better) Translates to: NHHSETIELIYN*SHREYESKSPP Trigger: AGGTGGTGACTTGCTCTCATACTCTCTGTGACTTCAGTTGTATATCAGCTCTATTGTTTCTGAATGGTGATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126038.4 ENSMUST00000179450.9 |
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| 3UTR-3UTR CAA 90 bp | ATGTATATAGGTCAGCGACAGCTGACCCTAGGCAATGATCACTTGAGTAATATTGAAGAAGACACAAAATaGTCCCTAACAAAGACACTA | + |
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Preference number: 3 (lower is better) Translates to: MYIGQRQLTLGNDHLSNIEEDTK*SLTKTL Trigger: TAGTGTCTTTGTTAGGGACAATTTTGTGTCTTCTTC...AATATTACTCAAGTGATCATTGCCTAGGGTCAGCTGTCGCTGACCTATATACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126038.4 ENSMUST00000179450.9 |
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| 3UTR-3UTR CAA 90 bp | TTGGTTGAGAAACCACTGCTTGATTTTTCTTACCACGAAATAAATCATGAAGACAGAAAGTTTACAAATTaGCCATTCTGGAGCACGGCC | + |
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Preference number: 3 (lower is better) Translates to: LVEKPLLDFSYHEINHEDRKFTN*PFWSTA Trigger: GGCCGTGCTCCAGAATGGCAAATTTGTAAACTTTCT...GTCTTCATGATTTATTTCGTGGTAAGAAAAATCAAGCAGTGGTTTCTCAACCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000126038.4 ENSMUST00000179450.9 |
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| 3UTR TCA 72 bp | AATAGAGCTGATATACAACTGAAGTCACAGAGAGTATaGGAGCAAGTCACCACCTATACATGTTCAATTTGG | + |
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Preference number: 3 (lower is better) Translates to: NRADIQLKSQRV*EQVTTYTCSIW Trigger: CCAAATTGAACATGTATAGGTGGTGACTTGCTCTCATACTCTCTGTGACTTCAGTTGTATATCAGCTCTATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126038.4 ENSMUST00000179450.9 |
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| 3UTR CCA 72 bp | AGATATAGGGAGAGAAAGTTTACAAATTTGCCATTCTaGAGCACGGCCCATTGTCTATACATCAGTTTGTTA | + |
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Preference number: 3 (lower is better) Translates to: RYRERKFTNLPF*STAHCLYISLL Trigger: TAACAAACTGATGTATAGACAATGGGCCGTGCTCCAGAATGGCAAATTTGTAAACTTTCTCTCCCTATATCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126038.4 ENSMUST00000179450.9 |
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| 3UTR-3UTR CAA 90 bp | TATCACCCAGCCTCTATCAGAGAAGTTTCCTCTTATAGTAGATGGCAATTAAAAGAAGAAGACACAAAATaGTCCCTAACAAAGACACTA | + |
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Preference number: 3 (lower is better) Translates to: YHPASIREVSSYSRWQLKEEDTK*SLTKTL Trigger: TAGTGTCTTTGTTAGGGACAATTTTGTGTCTTCTTC...TTTTAATTGCCATCTACTATAAGAGGAAACTTCTCTGATAGAGGCTGGGTGATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000126038.4 ENSMUST00000179450.9 |
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| 3UTR-3UTR CAA 90 bp | TATCACCCAGCCTCTATCAGAGAAGTTTCCTCTTATAGTAGATGGCAATTAAAATCCTACAATTTAACATaGTGCAGAGTGAGAGACTTT | + |
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Preference number: 3 (lower is better) Translates to: YHPASIREVSSYSRWQLKSYNLT*CRVRDF Trigger: AAAGTCTCTCACTCTGCACAATGTTAAATTGTAGGA...TTTTAATTGCCATCTACTATAAGAGGAAACTTCTCTGATAGAGGCTGGGTGATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126038.4 ENSMUST00000179450.9 |
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| 3UTR-3UTR CAA 90 bp | TTGGTTGAGAAACCACTGCTTGATTTTTCTTACCACGAAATAAATCATGAAGACCTTTCACAGAATGATTaGTTTCAGAGACTCATCATC | + |
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Preference number: 3 (lower is better) Translates to: LVEKPLLDFSYHEINHEDLSQND*FQRLII Trigger: GATGATGAGTCTCTGAAACAAATCATTCTGTGAAAG...GTCTTCATGATTTATTTCGTGGTAAGAAAAATCAAGCAGTGGTTTCTCAACCAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000126038.4 ENSMUST00000179450.9 |
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| 3UTR-3UTR CAA 90 bp | TCACTGAGTATTTTAACTATACAACAGGATAAGCCCCATTCCTATGAGAAGTTACTTTCACAGAATGATTaGTTTCAGAGACTCATCATC | + |
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Preference number: 3 (lower is better) Translates to: SLSILTIQQDKPHSYEKLLSQND*FQRLII Trigger: GATGATGAGTCTCTGAAACAAATCATTCTGTGAAAG...TAACTTCTCATAGGAATGGGGCTTATCCTGTTGTATAGTTAAAATACTCAGTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000126038.4 ENSMUST00000179450.9 |
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| 3UTR-3UTR CAA 90 bp | AATGGCAAAGTAGAAGAAGACACAAAATTGTCCCTAACAAAGACACTATTTCCTCAAGATGAGCATTTGTaGTCAGAATCACTCAAATTC | + |
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Preference number: 3 (lower is better) Translates to: NGKVEEDTKLSLTKTLFPQDEHL*SESLKF Trigger: GAATTTGAGTGATTCTGACAACAAATGCTCATCTTG...AGGAAATAGTGTCTTTGTTAGGGACAATTTTGTGTCTTCTTCTACTTTGCCATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126038.4 ENSMUST00000179450.9 |
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| 3UTR TCA 72 bp | TTGTCCCTAACAAAGACACTATTTCCTACTGATACCTaGTGCGAAAGGGAAAATTTGTTTGAAATTTTTCCC | + |
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Preference number: 3 (lower is better) Translates to: LSLTKTLFPTDT*CERENLFEIFP Trigger: GGGAAAAATTTCAAACAAATTTTCCCTTTCGCATCAGGTATCAGTAGGAAATAGTGTCTTTGTTAGGGACAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000126038.4 ENSMUST00000179450.9 |
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| CDS-3UTR TCA 90 bp | GAGAGAAAGTTTACAAATTTGCCATTCTGGAGCACGGCCCATTGTCTATACATCAGCGGTCAAAAGCCATaGCTGTCAGGATTAAGGTTT | + |
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Preference number: 4 (lower is better) Translates to: ERKFTNLPFWSTAHCLYISGQKP*LSGLRF Trigger: AAACCTTAATCCTGACAGTCATGGCTTTTGACCGCT...GATGTATAGACAATGGGCCGTGCTCCAGAATGGCAAATTTGTAAACTTTCTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126038.4 ENSMUST00000179450.9 |
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| 3UTR CAA 72 bp | GAGACACTGAGATATAGGGAGAGAAAGTTTACAAATTaGCCATTCTGGAGCACGGCCCATTGTCTATACATC | + |
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Preference number: 4 (lower is better) Translates to: ETLRYRERKFTN*PFWSTAHCLYI Trigger: GATGTATAGACAATGGGCCGTGCTCCAGAATGGCAAATTTGTAAACTTTCTCTCCCTATATCTCAGTGTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126038.4 ENSMUST00000179450.9 |
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| CDS-3UTR TCA 90 bp | GGACATATTTCCAGGATATTAGAAGAGACATGCTGTGCTATAGAAAAAGGAATGAGAGGCAACCATTCCTaGATTGGCAACCATGAGGAC | + |
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Preference number: 4 (lower is better) Translates to: GHISRILEETCCAIEKGMRGNHS*IGNHED Trigger: GTCCTCATGGTTGCCAATTCAGGAATGGTTGCCTCT...CATTCCTTTTTCTATAGCACAGCATGTCTCTTCTAATATCCTGGAAATATGTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000126038.4 ENSMUST00000179450.9 |
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| 3UTR CAA 72 bp | GCAGCTCTGAATAACATGAGGCATAATTCCAACACATaGAAGAGCCTCACCATTAAAATAAAATGTCCATGG | + |
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Preference number: 4 (lower is better) Translates to: AALNNMRHNSNT*KSLTIKIKCPW Trigger: CCATGGACATTTTATTTTAATGGTGAGGCTCTTCAATGTGTTGGAATTATGCCTCATGTTATTCAGAGCTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000126038.4 ENSMUST00000179450.9 |
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| CDS-3UTR CCA 90 bp | ATGTATATAGGTCAGCGACAGCTGACCCTAGGCAATGATCACTTGAGTAATATTACCAAACCTTCTTTATaGCAGTCTTCATCTCTTTAT | + |
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Preference number: 4 (lower is better) Translates to: MYIGQRQLTLGNDHLSNITKPSL*QSSSLY Trigger: ATAAAGAGATGAAGACTGCCATAAAGAAGGTTTGGT...AATATTACTCAAGTGATCATTGCCTAGGGTCAGCTGTCGCTGACCTATATACAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126038.4 ENSMUST00000179450.9 |
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| CDS-3UTR TCA 90 bp | GGACATATTTCCAGGATATTAGAAGAGACATGCTGTGCTATAGAAAAAGGAATGCATAAGAAGAAATTCTaGTATGTTCCTCTGGCATTC | + |
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Preference number: 4 (lower is better) Translates to: GHISRILEETCCAIEKGMHKKKF*YVPLAF Trigger: GAATGCCAGAGGAACATATCAGAATTTCTTCTTATG...CATTCCTTTTTCTATAGCACAGCATGTCTCTTCTAATATCCTGGAAATATGTCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000126038.4 ENSMUST00000179450.9 |
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| CDS-3UTR TCA 90 bp | ATCTGGTCACAATACAAAGTTCATTACTATAGCACTTCTTCTGAAGACAGTTTGCATGCAGTCTGTATATaGGATAGTTTTTCTTTCGGC | + |
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Preference number: 4 (lower is better) Translates to: IWSQYKVHYYSTSSEDSLHAVCI*DSFSFG Trigger: GCCGAAAGAAAAACTATCTCATATACAGACTGCATG...CAAACTGTCTTCAGAAGAAGTGCTATAGTAATGAACTTTGTATTGTGACCAGAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000126038.4 ENSMUST00000179450.9 |
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| CDS-3UTR TCA 90 bp | TCACTGAGTATTTTAACTATACAACAGGATAAGCCCCATTCCTATGAGAAGTTACATAAGAAGAAATTCTaGTATGTTCCTCTGGCATTC | + |
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Preference number: 4 (lower is better) Translates to: SLSILTIQQDKPHSYEKLHKKKF*YVPLAF Trigger: GAATGCCAGAGGAACATATCAGAATTTCTTCTTATG...TAACTTCTCATAGGAATGGGGCTTATCCTGTTGTATAGTTAAAATACTCAGTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000126038.4 ENSMUST00000179450.9 |
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| CDS-3UTR CCA 90 bp | TATCACCCAGCCTCTATCAGAGAAGTTTCCTCTTATAGTAGATGGCAATTAAAAACCAAACCTTCTTTATaGCAGTCTTCATCTCTTTAT | + |
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Preference number: 4 (lower is better) Translates to: YHPASIREVSSYSRWQLKTKPSL*QSSSLY Trigger: ATAAAGAGATGAAGACTGCCATAAAGAAGGTTTGGT...TTTTAATTGCCATCTACTATAAGAGGAAACTTCTCTGATAGAGGCTGGGTGATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000126038.4 ENSMUST00000179450.9 |
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| 3UTR CAA 72 bp | AAATCCCATAATGGCAAAGTAGAAGAAGACACAAAATaGTCCCTAACAAAGACACTATTTCCTACTGATACC | + |
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Preference number: 4 (lower is better) Translates to: KSHNGKVEEDTK*SLTKTLFPTDT Trigger: GGTATCAGTAGGAAATAGTGTCTTTGTTAGGGACAATTTTGTGTCTTCTTCTACTTTGCCATTATGGGATTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126038.4 ENSMUST00000179450.9 |
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| 3UTR CAA 72 bp | AATAATAAAATGACTTCCAATGACACAATTGCTATATaGGTAAATCAGTGTATCACCCAGCCTCTATCAGAG | + |
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Preference number: 4 (lower is better) Translates to: NNKMTSNDTIAI*VNQCITQPLSE Trigger: CTCTGATAGAGGCTGGGTGATACACTGATTTACCAATATAGCAATTGTGTCATTGGAAGTCATTTTATTATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126038.4 ENSMUST00000179450.9 |
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| CDS TCA 90 bp | GAGGAAATAGTACATAGGTTGGTTGAACAGAGAACTGCACCTAATTaGGAAAAGGATCAGGAGATTCCAAGACAAGATGGTAAAGTAGCA | + |
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Preference number: 5 (lower is better) Translates to: EEIVHRLVEQRTAPN*EKDQEIPRQDGKVA Trigger: TGCTACTTTACCATCTTGTCTTGGAATCTCCTGATCCTTTTCTCAATTAGGTGCAGTTCTCTGTTCAACCAACCTATGTACTATTTCCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126038.4 ENSMUST00000179450.9 |
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| CDS GCA 90 bp | AAAGCCATGACTGTCAGGATTAAGGTTTCAATCATTCCAAAGAAGTaGATGGCAAAGACCTGTAGCATGCAGTCTGTATATGAGATAGTT | + |
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Preference number: 5 (lower is better) Translates to: KAMTVRIKVSIIPKK*MAKTCSMQSVYEIV Trigger: AACTATCTCATATACAGACTGCATGCTACAGGTCTTTGCCATGCACTTCTTTGGAATGATTGAAACCTTAATCCTGACAGTCATGGCTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126038.4 ENSMUST00000179450.9 |
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| CDS TCA 72 bp | AAACAAGAGAACAAAGATAACAGAGGCAACCATTCCTaGATTGGCAACCATGAGGACACCAATGATGTAGGT | + |
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Preference number: 6 (lower is better) Translates to: KQENKDNRGNHS*IGNHEDTNDVG Trigger: ACCTACATCATTGGTGTCCTCATGGTTGCCAATTCAGGAATGGTTGCCTCTGTTATCTTTGTTCTCTTGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126038.4 ENSMUST00000179450.9 |
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