Pregenerated sensors for OLFR118 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000080990Ensembl transcript IDs: ENSMUST00000122036.2, ENSMUST00000215811.2, ENSMUST00000216551.2
Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CTAGATATGCAGAGAACTACGGCCACAAAGATTGCAGCCTCATTTTaGGATGTATCGCCACAAGCAAGTGCCAGGACAGGTGGAAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LDMQRTTATKIAASF*DVSPQASARTGGRS Trigger: TGACCTTCCACCTGTCCTGGCACTTGCTTGTGGCGATACATCCCAAAATGAGGCTGCAATCTTTGTGGCCGTAGTTCTCTGCATATCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000122036.2 ENSMUST00000215811.2 ENSMUST00000216551.2 |
||
| CDS CCA 90 bp | CACTGCAACCAGAATTCTGACATAGGAATAAATGATCAACAAAAATaGGCTAGATATGCAGAGAACTACGGCCACAAAGATTGCAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: HCNQNSDIGINDQQK*ARYAENYGHKDCSL Trigger: GAGGCTGCAATCTTTGTGGCCGTAGTTCTCTGCATATCTAGCCCATTTTTGTTGATCATTTATTCCTATGTCAGAATTCTGGTTGCAGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000122036.2 ENSMUST00000215811.2 ENSMUST00000216551.2 |
||
| CDS TCA 72 bp | GGAACAGGTGGAGAGAGCTTTATGGCGACCCTCAGGTaGAGGCATCACCAGCACTGCAACCAGAATTCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: GTGGESFMATLR*RHHQHCNQNSD Trigger: GTCAGAATTCTGGTTGCAGTGCTGGTGATGCCTTCACCTGAGGGTCGCCATAAAGCTCTCTCCACCTGTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122036.2 ENSMUST00000215811.2 ENSMUST00000216551.2 |
||
| CDS TCA 72 bp | TGCCAAATGGGCACATACCTCACGACTCATTCGGGTTaGGTAATGGAGTGGGGAGCATATGGCCATGTAGCG | + |
|
Preference number: 6 (lower is better) Translates to: CQMGTYLTTHSG*VMEWGAYGHVA Trigger: CGCTACATGGCCATATGCTCCCCACTCCATTACTCAACCCGAATGAGTCGTGAGGTATGTGCCCATTTGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000122036.2 ENSMUST00000215811.2 ENSMUST00000216551.2 |
||
| CDS CAA 72 bp | ATGCCAAATGGGCACATACCTCACGACTCATTCGGGTaGAGTAATGGAGTGGGGAGCATATGGCCATGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: MPNGHIPHDSFG*SNGVGSIWPCS Trigger: GCTACATGGCCATATGCTCCCCACTCCATTACTCAACCCGAATGAGTCGTGAGGTATGTGCCCATTTGGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000122036.2 ENSMUST00000215811.2 ENSMUST00000216551.2 |
||
| CDS GCA 72 bp | TGGGCTAGATATGCAGAGAACTACGGCCACAAAGATTaGAGCCTCATTTTGGGATGTATCGCCACAAGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: WARYAENYGHKD*SLILGCIATSK Trigger: CTTGCTTGTGGCGATACATCCCAAAATGAGGCTGCAATCTTTGTGGCCGTAGTTCTCTGCATATCTAGCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000122036.2 ENSMUST00000215811.2 ENSMUST00000216551.2 |
||
| CDS TCA 72 bp | CAGGAACCTCAGAGAACTTGGCAAATGCAAAGTGTTTaGCAGACAACTTGTTCTCCTGCCACAGAGAGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: QEPQRTWQMQSV*QTTCSPATESS Trigger: ACTGCTCTCTGTGGCAGGAGAACAAGTTGTCTGTCAAACACTTTGCATTTGCCAAGTTCTCTGAGGTTCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122036.2 ENSMUST00000215811.2 ENSMUST00000216551.2 |
||
| CDS CAA 72 bp | TCAGGAACCTCAGAGAACTTGGCAAATGCAAAGTGTTaGACAGACAACTTGTTCTCCTGCCACAGAGAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SGTSENLANAKC*TDNLFSCHREQ Trigger: CTGCTCTCTGTGGCAGGAGAACAAGTTGTCTGTCAAACACTTTGCATTTGCCAAGTTCTCTGAGGTTCCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122036.2 ENSMUST00000215811.2 ENSMUST00000216551.2 |
||
| CDS CAA 90 bp | AAGCATTCTTCAGGAACCTCAGAGAACTTGGCAAATGCAAAGTGTTaGACAGACAACTTGTTCTCCTGCCACAGAGAGCAGTTGACACTC | + |
|
Preference number: 6 (lower is better) Translates to: KHSSGTSENLANAKC*TDNLFSCHREQLTL Trigger: GAGTGTCAACTGCTCTCTGTGGCAGGAGAACAAGTTGTCTGTCAAACACTTTGCATTTGCCAAGTTCTCTGAGGTTCCTGAAGAATGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122036.2 ENSMUST00000215811.2 ENSMUST00000216551.2 |
||
| CDS CAA 90 bp | ATGAGGGTAAACAGGAGGAAGCATTCTTCAGGAACCTCAGAGAACTaGGCAAATGCAAAGTGTTTGACAGACAACTTGTTCTCCTGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: MRVNRRKHSSGTSEN*ANAKCLTDNLFSCH Trigger: GTGGCAGGAGAACAAGTTGTCTGTCAAACACTTTGCATTTGCCAAGTTCTCTGAGGTTCCTGAAGAATGCTTCCTCCTGTTTACCCTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122036.2 ENSMUST00000215811.2 ENSMUST00000216551.2 |
||
| CDS CAA 72 bp | GCTGGACTGGTGCATATGGCAAGAGTTATAAGTGCATaGCCTGTCAGTGATACTAAGAACATGAGGAGAATG | + |
|
Preference number: 6 (lower is better) Translates to: AGLVHMARVISA*PVSDTKNMRRM Trigger: CATTCTCCTCATGTTCTTAGTATCACTGACAGGCAATGCACTTATAACTCTTGCCATATGCACCAGTCCAGC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122036.2 ENSMUST00000215811.2 ENSMUST00000216551.2 |
||
| CDS CCA 72 bp | CAGAATTCTGACATAGGAATAAATGATCAACAAAAATaGGCTAGATATGCAGAGAACTACGGCCACAAAGAT | + |
|
Preference number: 6 (lower is better) Translates to: QNSDIGINDQQK*ARYAENYGHKD Trigger: ATCTTTGTGGCCGTAGTTCTCTGCATATCTAGCCCATTTTTGTTGATCATTTATTCCTATGTCAGAATTCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000122036.2 ENSMUST00000215811.2 ENSMUST00000216551.2 |
||