Pregenerated sensors for OLFR1178 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056995Ensembl transcript IDs: ENSMUST00000075640.2, ENSMUST00000214040.3
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTACCAGCCCAGAGATGGTCCCACCCACAAGGGTCCTTTCCTCCTTaGTCACTGATTGAGAAAATGCCTTACAGTTGTAGCTCATGGAGG | + |
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Preference number: 1 (lower is better) Translates to: LPAQRWSHPQGSFPP*SLIEKMPYSCSSWR Trigger: CCTCCATGAGCTACAACTGTAAGGCATTTTCTCAATCAGTGATCAAGGAGGAAAGGACCCTTGTGGGTGGGACCATCTCTGGGCTGGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR CCA 90 bp | ACTTGTGAGGCAGAGGCATGCGGATTTCTGAGTTCGAGGCCAACCTaGTCTACAGAGTGGGTTCTGGGACAGTCAAAGCTACACAGAAAA | + |
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Preference number: 1 (lower is better) Translates to: TCEAEACGFLSSRPT*STEWVLGQSKLHRK Trigger: TTTTCTGTGTAGCTTTGACTGTCCCAGAACCCACTCTGTAGACCAGGTTGGCCTCGAACTCAGAAATCCGCATGCCTCTGCCTCACAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR GCA 90 bp | GCAGGAGCTGATGCAGAGGCCATAGAGGGATGTTCTTTACTGGCTTaGTTTGCTGGCTTGCTCAGCTTGCTTTCTTATAGAACCCAAGAC | + |
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Preference number: 1 (lower is better) Translates to: AGADAEAIEGCSLLA*FAGLLSLLSYRTQD Trigger: GTCTTGGGTTCTATAAGAAAGCAAGCTGAGCAAGCCAGCAAAGCAAGCCAGTAAAGAACATCCCTCTATGGCCTCTGCATCAGCTCCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR CCA 90 bp | GAGGCATGCGGATTTCTGAGTTCGAGGCCAACCTGGTCTACAGAGTaGGTTCTGGGACAGTCAAAGCTACACAGAAAACCTGTTTTGAAA | + |
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Preference number: 1 (lower is better) Translates to: EACGFLSSRPTWSTE*VLGQSKLHRKPVLK Trigger: TTTCAAAACAGGTTTTCTGTGTAGCTTTGACTGTCCCAGAACCCACTCTGTAGACCAGGTTGGCCTCGAACTCAGAAATCCGCATGCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR CCA 90 bp | GTAATACAGGAGAATCTGAGAGAAGCCAGAGTGAATCAGTCTGCTTaGAAAGGAGTTCAGGCCAGAGCAGCTGAATTGAGCCAGCCATCA | + |
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Preference number: 1 (lower is better) Translates to: VIQENLREARVNQSA*KGVQARAAELSQPS Trigger: TGATGGCTGGCTCAATTCAGCTGCTCTGGCCTGAACTCCTTTCCAAGCAGACTGATTCACTCTGGCTTCTCTCAGATTCTCCTGTATTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR CCA 90 bp | CTCCGGGGGTACTGGTTAGTTCGTTCATATTGTTGTTCCACCTATTaGGTTGCAGATCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCT | + |
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Preference number: 1 (lower is better) Translates to: LRGYWLVRSYCCSTY*VADPFSSLGTFSSS Trigger: AGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCAATAGGTGGAACAACAATATGAACGAACTAACCAGTACCCCCGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR GCA 90 bp | CAGTTTTATATCATTGAAAATAGTTCTTTGACCAGGTGGTGGTGGTaGACGCCTTTAATCGCATCACTTGTGAGGCAGAGGCATGCGGAT | + |
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Preference number: 1 (lower is better) Translates to: QFYIIENSSLTRWWW*TPLIASLVRQRHAD Trigger: ATCCGCATGCCTCTGCCTCACAAGTGATGCGATTAAAGGCGTGCACCACCACCACCTGGTCAAAGAACTATTTTCAATGATATAAAACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR CCA 90 bp | TGTCAGTTTTATATCATTGAAAATAGTTCTTTGACCAGGTGGTGGTaGTGCACGCCTTTAATCGCATCACTTGTGAGGCAGAGGCATGCG | + |
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Preference number: 1 (lower is better) Translates to: CQFYIIENSSLTRWW*CTPLIASLVRQRHA Trigger: CGCATGCCTCTGCCTCACAAGTGATGCGATTAAAGGCGTGCACCACCACCACCTGGTCAAAGAACTATTTTCAATGATATAAAACTGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR CCA 90 bp | ACCTGTCAGTTTTATATCATTGAAAATAGTTCTTTGACCAGGTGGTaGTGGTGCACGCCTTTAATCGCATCACTTGTGAGGCAGAGGCAT | + |
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Preference number: 1 (lower is better) Translates to: TCQFYIIENSSLTRW*WCTPLIASLVRQRH Trigger: ATGCCTCTGCCTCACAAGTGATGCGATTAAAGGCGTGCACCACCACCACCTGGTCAAAGAACTATTTTCAATGATATAAAACTGACAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR CCA 90 bp | TTCACCTGTCAGTTTTATATCATTGAAAATAGTTCTTTGACCAGGTaGTGGTGGTGCACGCCTTTAATCGCATCACTTGTGAGGCAGAGG | + |
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Preference number: 1 (lower is better) Translates to: FTCQFYIIENSSLTR*WWCTPLIASLVRQR Trigger: CCTCTGCCTCACAAGTGATGCGATTAAAGGCGTGCACCACCACCACCTGGTCAAAGAACTATTTTCAATGATATAAAACTGACAGGTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR TCA 90 bp | GAGAAAATGCCTTACAGTTGTAGCTCATGGAGGCATTTCCTCAACTaGAGCTCCTTTCTCTGTGATAACTCCATCTGTGCCAAGTATCTA | + |
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Preference number: 1 (lower is better) Translates to: EKMPYSCSSWRHFLN*SSFLCDNSICAKYL Trigger: TAGATACTTGGCACAGATGGAGTTATCACAGAGAAAGGAGCTTCAGTTGAGGAAATGCCTCCATGAGCTACAACTGTAAGGCATTTTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR GCA 90 bp | ATGCATGCATGCATGCACACAAATTCAAGAATTTGCTGGTTTTTATaGGGGCACTGCCAAGTGTATAGACCAGCTCTGTGTATGTTTCCT | + |
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Preference number: 1 (lower is better) Translates to: MHACMHTNSRICWFL*GHCQVYRPALCMFP Trigger: AGGAAACATACACAGAGCTGGTCTATACACTTGGCAGTGCCCGCATAAAAACCAGCAAATTCTTGAATTTGTGTGCATGCATGCATGCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR GCA 90 bp | TGCATGCACACAAATTCAAGAATTTGCTGGTTTTTATGCGGGCACTaGCAAGTGTATAGACCAGCTCTGTGTATGTTTCCTGTTCCAATT | + |
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Preference number: 1 (lower is better) Translates to: CMHTNSRICWFLCGH*QVYRPALCMFPVPI Trigger: AATTGGAACAGGAAACATACACAGAGCTGGTCTATACACTTGGCAGTGCCCGCATAAAAACCAGCAAATTCTTGAATTTGTGTGCATGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR GCA 90 bp | GGGGGTTATAGGCATGTGCAGTCATACCTTAACTTTTTACATGAGTaGTGGAAATTAGAACTAAGGTCCTATACAGCAAATTGTCTTACC | + |
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Preference number: 1 (lower is better) Translates to: GGYRHVQSYLNFLHE*WKLELRSYTANCLT Trigger: GGTAAGACAATTTGCTGTATAGGACCTTAGTTCTAATTTCCAGCACTCATGTAAAAAGTTAAGGTATGACTGCACATGCCTATAACCCCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR CCA 90 bp | GGTTATAGGCATGTGCAGTCATACCTTAACTTTTTACATGAGTGCTaGAAATTAGAACTAAGGTCCTATACAGCAAATTGTCTTACCTGC | + |
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Preference number: 1 (lower is better) Translates to: GYRHVQSYLNFLHEC*KLELRSYTANCLTC Trigger: GCAGGTAAGACAATTTGCTGTATAGGACCTTAGTTCTAATTTCCAGCACTCATGTAAAAAGTTAAGGTATGACTGCACATGCCTATAACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR CCA 90 bp | ACATGGTTCAGCTCAGCATTAGTACATATCTTTAATCCCTCTGGTTaGAATTCAGACACACCCTTAGCACACAACTTTAATCACAAACAA | + |
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Preference number: 1 (lower is better) Translates to: TWFSSALVHIFNPSG*NSDTPLAHNFNHKQ Trigger: TTGTTTGTGATTAAAGTTGTGTGCTAAGGGTGTGTCTGAATTCCAACCAGAGGGATTAAAGATATGTACTAATGCTGAGCTGAACCATGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR CAA 90 bp | GCAGAGGCCATAGAGGGATGTTCTTTACTGGCTTGCTTTGCTGGCTaGCTCAGCTTGCTTTCTTATAGAACCCAAGACTACCAGCCCAGA | + |
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Preference number: 2 (lower is better) Translates to: AEAIEGCSLLACFAG*LSLLSYRTQDYQPR Trigger: TCTGGGCTGGTAGTCTTGGGTTCTATAAGAAAGCAAGCTGAGCAAGCCAGCAAAGCAAGCCAGTAAAGAACATCCCTCTATGGCCTCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR-3UTR CCA 90 bp | TCATCACCAAGGAAGTCAGGACTGGAACTCAAGCAGGTAAGAAAGCAGGAGCTGAGTTCTTTGACCAGGTaGTGGTGGTGCACGCCTTTA | + |
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Preference number: 2 (lower is better) Translates to: SSPRKSGLELKQVRKQELSSLTR*WWCTPL Trigger: TAAAGGCGTGCACCACCACCACCTGGTCAAAGAACT...CAGCTCCTGCTTTCTTACCTGCTTGAGTTCCAGTCCTGACTTCCTTGGTGATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR CAA 90 bp | ATAGAGGGATGTTCTTTACTGGCTTGCTTTGCTGGCTTGCTCAGCTaGCTTTCTTATAGAACCCAAGACTACCAGCCCAGAGATGGTCCC | + |
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Preference number: 2 (lower is better) Translates to: IEGCSLLACFAGLLS*LSYRTQDYQPRDGP Trigger: GGGACCATCTCTGGGCTGGTAGTCTTGGGTTCTATAAGAAAGCAAGCTGAGCAAGCCAGCAAAGCAAGCCAGTAAAGAACATCCCTCTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR CAA 90 bp | TCATATTGTTGTTCCACCTATTGGGTTGCAGATCCCTTTAGCTCCTaGGGTACTTTCTCTAGCTCTTTCATTGGGGGCCCTGTGATCCAT | + |
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Preference number: 2 (lower is better) Translates to: SYCCSTYWVADPFSS*GTFSSSFIGGPVIH Trigger: ATGGATCACAGGGCCCCCAATGAAAGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCAATAGGTGGAACAACAATATGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR-3UTR GCA 90 bp | TCATCACCAAGGAAGTCAGGACTGGAACTCAAGCAGGTAAGAAAGCAGGAGCTGTGTACAGAGACAGGTTaGAGAGAGAACAAGCTAGAT | + |
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Preference number: 2 (lower is better) Translates to: SSPRKSGLELKQVRKQELCTETG*RENKLD Trigger: ATCTAGCTTGTTCTCTCTGCAACCTGTCTCTGTACA...CAGCTCCTGCTTTCTTACCTGCTTGAGTTCCAGTCCTGACTTCCTTGGTGATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR-3UTR GCA 90 bp | TCATCACCAAGGAAGTCAGGACTGGAACTCAAGCAGGTAAGAAAGCAGGAGCTGATAGGCAAAGGACTGTaGTGTTCTAAGTGGTTTAAG | + |
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Preference number: 2 (lower is better) Translates to: SSPRKSGLELKQVRKQELIGKGL*CSKWFK Trigger: CTTAAACCACTTAGAACAGCACAGTCCTTTGCCTAT...CAGCTCCTGCTTTCTTACCTGCTTGAGTTCCAGTCCTGACTTCCTTGGTGATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR-3UTR GCA 90 bp | ATTTGTACAGAGACAGGTTGCAGAGAGAACAAGCTAGATACAAGTGAAGGTAAAACCAGGTGGTGGTGGTaGACGCCTTTAATCGCATCA | + |
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Preference number: 2 (lower is better) Translates to: ICTETGCRENKLDTSEGKTRWWW*TPLIAS Trigger: TGATGCGATTAAAGGCGTGCACCACCACCACCTGGT...TTTACCTTCACTTGTATCTAGCTTGTTCTCTCTGCAACCTGTCTCTGTACAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR-3UTR CCA 90 bp | TCATCACCAAGGAAGTCAGGACTGGAACTCAAGCAGGTAAGAAAGCAGGAGCTGAAGAAGAGGAGGTTGTaGAAATTTTGTAAAAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: SSPRKSGLELKQVRKQELKKRRL*KFCKSQ Trigger: CTGGCTTTTACAAAATTTCCACAACCTCCTCTTCTT...CAGCTCCTGCTTTCTTACCTGCTTGAGTTCCAGTCCTGACTTCCTTGGTGATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR-3UTR CCA 90 bp | ATTTGTACAGAGACAGGTTGCAGAGAGAACAAGCTAGATACAAGTGAAGGTAAAACCTGGTCTACAGAGTaGGTTCTGGGACAGTCAAAG | + |
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Preference number: 2 (lower is better) Translates to: ICTETGCRENKLDTSEGKTWSTE*VLGQSK Trigger: CTTTGACTGTCCCAGAACCCACTCTGTAGACCAGGT...TTTACCTTCACTTGTATCTAGCTTGTTCTCTCTGCAACCTGTCTCTGTACAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR-3UTR TCA 90 bp | CTGAGGGAGAAAAGAAGAAAGACGAAAGTTTTACTGGGACATTTGTACAGAGACACAGTTCACCTTGAGTaGACACAGTTTTACTGCCCT | + |
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Preference number: 2 (lower is better) Translates to: LREKRRKTKVLLGHLYRDTVHLE*TQFYCP Trigger: AGGGCAGTAAAACTGTGTTCACTCAAGGTGAACTGT...GTCTCTGTACAAATGTCCCAGTAAAACTTTCGTCTTTCTTCTTTTCTCCCTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR-3UTR TCA 90 bp | ATTTGTACAGAGACAGGTTGCAGAGAGAACAAGCTAGATACAAGTGAAGGTAAATCTTGTAGCTTGAAATaGGCAGGGGTCAGAAGAACC | + |
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Preference number: 2 (lower is better) Translates to: ICTETGCRENKLDTSEGKSCSLK*AGVRRT Trigger: GGTTCTTCTGACCCCTGCTCATTTCAAGCTACAAGA...TTTACCTTCACTTGTATCTAGCTTGTTCTCTCTGCAACCTGTCTCTGTACAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR-3UTR GCA 90 bp | CCGGGGGTACTGGTTAGTTCGTTCATATTGTTGTTCCACCTATTGGGTTGCAGAATAATTCATTATATGTaGTCTCTGTGGTCACTTAGG | + |
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Preference number: 2 (lower is better) Translates to: PGVLVSSFILLFHLLGCRIIHYM*SLWSLR Trigger: CCTAAGTGACCACAGAGAGCACATATAATGAATTAT...TCTGCAACCCAATAGGTGGAACAACAATATGAACGAACTAACCAGTACCCCCGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR-3UTR TCA 90 bp | CTGAGGGAGAAAAGAAGAAAGACGAAAGTTTTACTGGGACATTTGTACAGAGACTTTCATCTTGTAGCTTaGAATGAGCAGGGGTCAGAA | + |
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Preference number: 2 (lower is better) Translates to: LREKRRKTKVLLGHLYRDFHLVA*NEQGSE Trigger: TTCTGACCCCTGCTCATTTCAAGCTACAAGATGAAA...GTCTCTGTACAAATGTCCCAGTAAAACTTTCGTCTTTCTTCTTTTCTCCCTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR-3UTR TCA 90 bp | ACATGCATGCATGCATGCACACAAATTCAAGAATTTGCTGGTTTTTATGCGGGCAGGTATAAGACACATTaGCAGGACATTTGTCTTTTG | + |
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Preference number: 2 (lower is better) Translates to: TCMHACTQIQEFAGFYAGRYKTH*QDICLL Trigger: CAAAAGACAAATGTCCTGTCAATGTGTCTTATACCT...GCCCGCATAAAAACCAGCAAATTCTTGAATTTGTGTGCATGCATGCATGCATGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR-3UTR CCA 90 bp | ATTGTTGTTCCACCTATTGGGTTGCAGATCCCTTTAGCTCCTTGGGTACTTTCTATCTTTGCTTATTTATaGAAGCTGGATCTAGATCGA | + |
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Preference number: 2 (lower is better) Translates to: IVVPPIGLQIPLAPWVLSIFAYL*KLDLDR Trigger: TCGATCTAGATCCAGCTTCCATAAATAAGCAAAGAT...AGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCAATAGGTGGAACAACAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR-3UTR CCA 90 bp | TCTTTGATTAATGGAGCCATTTATACTGAATTGGAAGGCTACCCCATGCTTTTCAGTTTGCAAGACCAATaGGCCTCTCTTTCGATTGAT | + |
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Preference number: 2 (lower is better) Translates to: SLINGAIYTELEGYPMLFSLQDQ*ASLSID Trigger: ATCAATCGAAAGAGAGGCCCATTGGTCTTGCAAACT...GAAAAGCATGGGGTAGCCTTCCAATTCAGTATAAATGGCTCCATTAATCAAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR-3UTR TCA 90 bp | TCTTTGATTAATGGAGCCATTTATACTGAATTGGAAGGCTACCCCATGCTTTTCGGGATGCCAATAATGTaGAAGAGAATTTTTGGCTTG | + |
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Preference number: 2 (lower is better) Translates to: SLINGAIYTELEGYPMLFGMPIM*KRIFGL Trigger: CAAGCCAAAAATTCTCTTTCACATTATTGGCATCCC...GAAAAGCATGGGGTAGCCTTCCAATTCAGTATAAATGGCTCCATTAATCAAAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR-3UTR TCA 90 bp | CTGAGGGAGAAAAGAAGAAAGACGAAAGTTTTACTGGGACATTTGTACAGAGACATAAATTTATGGTTATaGGAGTCACCACAACAGAGG | + |
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Preference number: 2 (lower is better) Translates to: LREKRRKTKVLLGHLYRDINLWL*ESPQQR Trigger: CCTCTGTTGTGGTGACTCTCATAACCATAAATTTAT...GTCTCTGTACAAATGTCCCAGTAAAACTTTCGTCTTTCTTCTTTTCTCCCTCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR-3UTR CCA 90 bp | ATTTGTACAGAGACAGGTTGCAGAGAGAACAAGCTAGATACAAGTGAAGGTAAAAATTCAAGAATTTGCTaGTTTTTATGCGGGCACTGC | + |
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Preference number: 2 (lower is better) Translates to: ICTETGCRENKLDTSEGKNSRIC*FLCGHC Trigger: GCAGTGCCCGCATAAAAACCAGCAAATTCTTGAATT...TTTACCTTCACTTGTATCTAGCTTGTTCTCTCTGCAACCTGTCTCTGTACAAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR-3UTR GCA 90 bp | CTGAGGGAGAAAAGAAGAAAGACGAAAGTTTTACTGGGACATTTGTACAGAGACAGTTGTAGAAATACATaGTTATTGATCCTACCCTAC | + |
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Preference number: 2 (lower is better) Translates to: LREKRRKTKVLLGHLYRDSCRNT*LLILPY Trigger: GTAGGGTAGGATCAATAAGCATGTATTTCTACAACT...GTCTCTGTACAAATGTCCCAGTAAAACTTTCGTCTTTCTTCTTTTCTCCCTCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR TCA 72 bp | CTGCTTGGAAAGGAGTTCAGGCCAGAGCAGCTGAATTaGGCCAGCCATCAGTTCCGAAAGAACTGGGAGGGA | + |
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Preference number: 3 (lower is better) Translates to: LLGKEFRPEQLN*ASHQFRKNWEG Trigger: TCCCTCCCAGTTCTTTCGGAACTGATGGCTGGCTCAATTCAGCTGCTCTGGCCTGAACTCCTTTCCAAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR TCA 72 bp | TCAGTCTGCTTGGAAAGGAGTTCAGGCCAGAGCAGCTaGATTGAGCCAGCCATCAGTTCCGAAAGAACTGGG | + |
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Preference number: 3 (lower is better) Translates to: SVCLERSSGQSS*IEPAISSERTG Trigger: CCCAGTTCTTTCGGAACTGATGGCTGGCTCAATTCAGCTGCTCTGGCCTGAACTCCTTTCCAAGCAGACTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR GCA 72 bp | CACGCCTTTAATCGCATCACTTGTGAGGCAGAGGCATaGGGATTTCTGAGTTCGAGGCCAACCTGGTCTACA | + |
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Preference number: 3 (lower is better) Translates to: HAFNRITCEAEA*GFLSSRPTWST Trigger: TGTAGACCAGGTTGGCCTCGAACTCAGAAATCCGCATGCCTCTGCCTCACAAGTGATGCGATTAAAGGCGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR CCA 72 bp | GTTCCACCTATTGGGTTGCAGATCCCTTTAGCTCCTTaGGTACTTTCTCTAGCTCTTTCATTGGGGGCCCTG | + |
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Preference number: 3 (lower is better) Translates to: VPPIGLQIPLAP*VLSLALSLGAL Trigger: CAGGGCCCCCAATGAAAGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCAATAGGTGGAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR CCA 72 bp | GGATTTCTGAGTTCGAGGCCAACCTGGTCTACAGAGTaGGTTCTGGGACAGTCAAAGCTACACAGAAAACCT | + |
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Preference number: 3 (lower is better) Translates to: GFLSSRPTWSTE*VLGQSKLHRKP Trigger: AGGTTTTCTGTGTAGCTTTGACTGTCCCAGAACCCACTCTGTAGACCAGGTTGGCCTCGAACTCAGAAATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR CCA 72 bp | GAGAATCTGAGAGAAGCCAGAGTGAATCAGTCTGCTTaGAAAGGAGTTCAGGCCAGAGCAGCTGAATTGAGC | + |
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Preference number: 3 (lower is better) Translates to: ENLREARVNQSA*KGVQARAAELS Trigger: GCTCAATTCAGCTGCTCTGGCCTGAACTCCTTTCCAAGCAGACTGATTCACTCTGGCTTCTCTCAGATTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR-3UTR CAA 90 bp | TCATCACCAAGGAAGTCAGGACTGGAACTCAAGCAGGTAAGAAAGCAGGAGCTGGATCCCTTTAGCTCCTaGGGTACTTTCTCTAGCTCT | + |
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Preference number: 3 (lower is better) Translates to: SSPRKSGLELKQVRKQELDPFSS*GTFSSS Trigger: AGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATC...CAGCTCCTGCTTTCTTACCTGCTTGAGTTCCAGTCCTGACTTCCTTGGTGATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR TCA 72 bp | CAGAGATGGTCCCACCCACAAGGGTCCTTTCCTCCTTaGTCACTGATTGAGAAAATGCCTTACAGTTGTAGC | + |
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Preference number: 3 (lower is better) Translates to: QRWSHPQGSFPP*SLIEKMPYSCS Trigger: GCTACAACTGTAAGGCATTTTCTCAATCAGTGATCAAGGAGGAAAGGACCCTTGTGGGTGGGACCATCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR GCA 72 bp | GTTCTTTACTGGCTTGCTTTGCTGGCTTGCTCAGCTTaGTTTCTTATAGAACCCAAGACTACCAGCCCAGAG | + |
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Preference number: 3 (lower is better) Translates to: VLYWLALLACSA*FLIEPKTTSPE Trigger: CTCTGGGCTGGTAGTCTTGGGTTCTATAAGAAAGCAAGCTGAGCAAGCCAGCAAAGCAAGCCAGTAAAGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR TCA 72 bp | CTAGGCCATCTTCTGATACATATGCAGCTAGAGACATaGGCTCCGGGGGTACTGGTTAGTTCGTTCATATTG | + |
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Preference number: 3 (lower is better) Translates to: LGHLLIHMQLET*APGVLVSSFIL Trigger: CAATATGAACGAACTAACCAGTACCCCCGGAGCTCATGTCTCTAGCTGCATATGTATCAGAAGATGGCCTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR GCA 72 bp | ATCATTGAAAATAGTTCTTTGACCAGGTGGTGGTGGTaGACGCCTTTAATCGCATCACTTGTGAGGCAGAGG | + |
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Preference number: 3 (lower is better) Translates to: IIENSSLTRWWW*TPLIASLVRQR Trigger: CCTCTGCCTCACAAGTGATGCGATTAAAGGCGTGCACCACCACCACCTGGTCAAAGAACTATTTTCAATGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR GCA 72 bp | GATGCAGAGGCCATAGAGGGATGTTCTTTACTGGCTTaGTTTGCTGGCTTGCTCAGCTTGCTTTCTTATAGA | + |
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Preference number: 3 (lower is better) Translates to: DAEAIEGCSLLA*FAGLLSLLSYR Trigger: TCTATAAGAAAGCAAGCTGAGCAAGCCAGCAAAGCAAGCCAGTAAAGAACATCCCTCTATGGCCTCTGCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR-3UTR CAA 90 bp | TCATCACCAAGGAAGTCAGGACTGGAACTCAAGCAGGTAAGAAAGCAGGAGCTGGTCCTATACAGCAAATaGTCTTACCTGCTAACATTC | + |
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Preference number: 3 (lower is better) Translates to: SSPRKSGLELKQVRKQELVLYSK*SYLLTF Trigger: GAATGTTAGCAGGTAAGACAATTTGCTGTATAGGAC...CAGCTCCTGCTTTCTTACCTGCTTGAGTTCCAGTCCTGACTTCCTTGGTGATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR-3UTR CAA 90 bp | TCATCACCAAGGAAGTCAGGACTGGAACTCAAGCAGGTAAGAAAGCAGGAGCTGTTGAAGAAGAGGAGGTaGTGGAAATTTTGTAAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: SSPRKSGLELKQVRKQELLKKRR*WKFCKS Trigger: GCTTTTACAAAATTTCCACAACCTCCTCTTCTTCAA...CAGCTCCTGCTTTCTTACCTGCTTGAGTTCCAGTCCTGACTTCCTTGGTGATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR-3UTR CAA 90 bp | ATTTGTACAGAGACAGGTTGCAGAGAGAACAAGCTAGATACAAGTGAAGGTAAAGTGGTGCCTGAAGATTaGTGTGATGGCATTGGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: ICTETGCRENKLDTSEGKVVPED*CDGIGG Trigger: CCCACCAATGCCATCACACAAATCTTCAGGCACCAC...TTTACCTTCACTTGTATCTAGCTTGTTCTCTCTGCAACCTGTCTCTGTACAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR-3UTR CAA 90 bp | TCATCACCAAGGAAGTCAGGACTGGAACTCAAGCAGGTAAGAAAGCAGGAGCTGTTACTCCACCTTGTCTaGAAAGTAAGTAGTCAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: SSPRKSGLELKQVRKQELLLHLV*KVSSQR Trigger: TCTTTGACTACTTACTTTCAAGACAAGGTGGAGTAA...CAGCTCCTGCTTTCTTACCTGCTTGAGTTCCAGTCCTGACTTCCTTGGTGATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR GCA 72 bp | TGCATGCACACAAATTCAAGAATTTGCTGGTTTTTATaGGGGCACTGCCAAGTGTATAGACCAGCTCTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: CMHTNSRICWFL*GHCQVYRPALC Trigger: ACACAGAGCTGGTCTATACACTTGGCAGTGCCCGCATAAAAACCAGCAAATTCTTGAATTTGTGTGCATGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR CCA 72 bp | TACTGGTTAGTTCGTTCATATTGTTGTTCCACCTATTaGGTTGCAGATCCCTTTAGCTCCTTGGGTACTTTC | + |
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Preference number: 3 (lower is better) Translates to: YWLVRSYCCSTY*VADPFSSLGTF Trigger: GAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCAATAGGTGGAACAACAATATGAACGAACTAACCAGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR CCA 72 bp | ATGCATGCATGCATGCACACAAATTCAAGAATTTGCTaGTTTTTATGCGGGCACTGCCAAGTGTATAGACCA | + |
|
Preference number: 3 (lower is better) Translates to: MHACMHTNSRIC*FLCGHCQVYRP Trigger: TGGTCTATACACTTGGCAGTGCCCGCATAAAAACCAGCAAATTCTTGAATTTGTGTGCATGCATGCATGCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR-3UTR CAA 90 bp | CTGAGGGAGAAAAGAAGAAAGACGAAAGTTTTACTGGGACATTTGTACAGAGACATTGAAAATAGTTCTTaGACCAGGTGGTGGTGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: LREKRRKTKVLLGHLYRDIENSS*TRWWWC Trigger: GCACCACCACCACCTGGTCAAAGAACTATTTTCAAT...GTCTCTGTACAAATGTCCCAGTAAAACTTTCGTCTTTCTTCTTTTCTCCCTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR GCA 72 bp | ACAAATTCAAGAATTTGCTGGTTTTTATGCGGGCACTaGCAAGTGTATAGACCAGCTCTGTGTATGTTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: TNSRICWFLCGH*QVYRPALCMFP Trigger: AGGAAACATACACAGAGCTGGTCTATACACTTGGCAGTGCCCGCATAAAAACCAGCAAATTCTTGAATTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR CCA 72 bp | CAGTTTTATATCATTGAAAATAGTTCTTTGACCAGGTaGTGGTGGTGCACGCCTTTAATCGCATCACTTGTG | + |
|
Preference number: 3 (lower is better) Translates to: QFYIIENSSLTR*WWCTPLIASLV Trigger: CACAAGTGATGCGATTAAAGGCGTGCACCACCACCACCTGGTCAAAGAACTATTTTCAATGATATAAAACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR-3UTR CAA 90 bp | CTGAGGGAGAAAAGAAGAAAGACGAAAGTTTTACTGGGACATTTGTACAGAGACATTTGTGTGATGGCATaGGTGGGTCTTGGTAAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: LREKRRKTKVLLGHLYRDICVMA*VGLGKN Trigger: ATTCTTACCAAGACCCACCAATGCCATCACACAAAT...GTCTCTGTACAAATGTCCCAGTAAAACTTTCGTCTTTCTTCTTTTCTCCCTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR-3UTR CAA 90 bp | ACATGCATGCATGCATGCACACAAATTCAAGAATTTGCTGGTTTTTATGCGGGCGCACTAAGTTTGCTGTaGTTTGAATTAGACAGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: TCMHACTQIQEFAGFYAGALSLL*FELDRR Trigger: TCTTCTGTCTAATTCAAACAACAGCAAACTTAGTGC...GCCCGCATAAAAACCAGCAAATTCTTGAATTTGTGTGCATGCATGCATGCATGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR-3UTR CAA 90 bp | CTGAGGGAGAAAAGAAGAAAGACGAAAGTTTTACTGGGACATTTGTACAGAGACGTTATAGACATTTTCTaGAGGGACAAGCACTATACC | + |
|
Preference number: 3 (lower is better) Translates to: LREKRRKTKVLLGHLYRDVIDIF*RDKHYT Trigger: GGTATAGTGCTTGTCCCTCAAGAAAATGTCTATAAC...GTCTCTGTACAAATGTCCCAGTAAAACTTTCGTCTTTCTTCTTTTCTCCCTCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR TCA 72 bp | CTGTTAGGGCTTCTTAGCCTTTTGAGTTCCCTCTTTTaGAAATCCCTGTTTAGATCTGTATCTCCTGCATTT | + |
|
Preference number: 3 (lower is better) Translates to: LLGLLSLLSSLF*KSLFRSVSPAF Trigger: AAATGCAGGAGATACAGATCTAAACAGGGATTTTCAAAAGAGGGAACTCAAAAGGCTAAGAAGCCCTAACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR GCA 72 bp | CGAAAGTTTTACTGGGACATTTGTACAGAGACAGGTTaGAGAGAGAACAAGCTAGATACAAGTGAAGGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: RKFYWDICTETG*RENKLDTSEGK Trigger: TTTACCTTCACTTGTATCTAGCTTGTTCTCTCTGCAACCTGTCTCTGTACAAATGTCCCAGTAAAACTTTCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR CCA 72 bp | TTTCCCTGTTTACAGAGAGCAAGCCCATGTTTTCACTaGTTAGAGAAAGCTAGTCCATGTTGTTTTATCTAC | + |
|
Preference number: 3 (lower is better) Translates to: FPCLQRASPCFH*LEKASPCCFIY Trigger: GTAGATAAAACAACATGGACTAGCTTTCTCTAACCAGTGAAAACATGGGCTTGCTCTCTGTAAACAGGGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR TCA 72 bp | AAAGTAAAATTAATTTGTAGAAGACGCACCCATGTTTaGATGTTATGTCGTACTGAGTGGAGACAAAGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: KVKLICRRRTHV*MLCRTEWRQSD Trigger: GTCACTTTGTCTCCACTCAGTACGACATAACATTCAAACATGGGTGCGTCTTCTACAAATTAATTTTACTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR GCA 72 bp | GTCAAAGAGAAACTGGTTATACAGGACAATAAGTACTaGATAACACAGAAGATGTTAACCATTCTTAGTTGC | + |
|
Preference number: 3 (lower is better) Translates to: VKEKLVIQDNKY*ITQKMLTILSC Trigger: GCAACTAAGAATGGTTAACATCTTCTGTGTTATGCAGTACTTATTGTCCTGTATAACCAGTTTCTCTTTGAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR GCA 72 bp | ATATTCTCTGATGCAGGTACAGATAAGAGTTATCTTTaGTTATTTATGGAAGCTGGATCTAGATCGAGTTTA | + |
|
Preference number: 3 (lower is better) Translates to: IFSDAGTDKSYL*LFMEAGSRSSL Trigger: TAAACTCGATCTAGATCCAGCTTCCATAAATAAGCAAAGATAACTCTTATCTGTACCTGCATCAGAGAATAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR CAA 72 bp | TCTGCTTGGAAAGGAGTTCAGGCCAGAGCAGCTGAATaGAGCCAGCCATCAGTTCCGAAAGAACTGGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SAWKGVQARAAE*SQPSVPKELGG Trigger: CCCTCCCAGTTCTTTCGGAACTGATGGCTGGCTCAATTCAGCTGCTCTGGCCTGAACTCCTTTCCAAGCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| CDS-3UTR GCA 90 bp | TCATCACCAAGGAAGTCAGGACTGGAACTCAAGCAGGTAAGAAAGCAGGAGCTGACAGCATCACACTTCTaGCTGCTCATAAGGATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SSPRKSGLELKQVRKQELTASHF*LLIRMV Trigger: CACCATCCTTATGAGCAGGCAGAAGTGTGATGCTGT...CAGCTCCTGCTTTCTTACCTGCTTGAGTTCCAGTCCTGACTTCCTTGGTGATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| CDS-3UTR TCA 90 bp | CCGGGGGTACTGGTTAGTTCGTTCATATTGTTGTTCCACCTATTGGGTTGCAGAACTGCCAGGAGAAATTaGCCAAAGGAATGCAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: PGVLVSSFILLFHLLGCRTARRN*PKECRN Trigger: ATTTCTGCATTCCTTTGGTCAATTTCTCCTGGCAGT...TCTGCAACCCAATAGGTGGAACAACAATATGAACGAACTAACCAGTACCCCCGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| CDS-3UTR TCA 90 bp | TCTTTGATTAATGGAGCCATTTATACTGAATTGGAAGGCTACCCCATGCTTTTCGATGGTGGAAAACAGTaGCACCCTTCAGCCTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SLINGAIYTELEGYPMLFDGGKQ*HPSACF Trigger: GAAACAGGCTGAAGGGTGTCACTGTTTTCCACCATC...GAAAAGCATGGGGTAGCCTTCCAATTCAGTATAAATGGCTCCATTAATCAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| CDS-3UTR GCA 90 bp | TCTTTGATTAATGGAGCCATTTATACTGAATTGGAAGGCTACCCCATGCTTTTCCCCAGCACAGGAAGCTaGAATCACAGCATCACACTT | + |
|
Preference number: 4 (lower is better) Translates to: SLINGAIYTELEGYPMLFPSTGS*NHSITL Trigger: AAGTGTGATGCTGTGATTGCAGCTTCCTGTGCTGGG...GAAAAGCATGGGGTAGCCTTCCAATTCAGTATAAATGGCTCCATTAATCAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| CDS-3UTR TCA 90 bp | ACATGCATGCATGCATGCACACAAATTCAAGAATTTGCTGGTTTTTATGCGGGCGGTGTAACACAAATCTaGAAGTGCAAGGTAACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TCMHACTQIQEFAGFYAGGVTQI*KCKVTQ Trigger: CTGAGTTACCTTGCACTTTCAGATTTGTGTTACACC...GCCCGCATAAAAACCAGCAAATTCTTGAATTTGTGTGCATGCATGCATGCATGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| CDS-3UTR TCA 90 bp | ATTTGTACAGAGACAGGTTGCAGAGAGAACAAGCTAGATACAAGTGAAGGTAAATACCACAGTGATGTGTaGACTGCATGTGGAAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ICTETGCRENKLDTSEGKYHSDV*TACGKS Trigger: GCTCTTTCCACATGCAGTTCACACATCACTGTGGTA...TTTACCTTCACTTGTATCTAGCTTGTTCTCTCTGCAACCTGTCTCTGTACAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| CDS-3UTR GCA 90 bp | CTGAGGGAGAAAAGAAGAAAGACGAAAGTTTTACTGGGACATTTGTACAGAGACATGTGGAAAGAGCTTTaGGACGATTCTCTGCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LREKRRKTKVLLGHLYRDMWKEL*DDSLQS Trigger: ACTCTGCAGAGAATCGTCGCAAAGCTCTTTCCACAT...GTCTCTGTACAAATGTCCCAGTAAAACTTTCGTCTTTCTTCTTTTCTCCCTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| CDS-3UTR CCA 90 bp | TCTTTGATTAATGGAGCCATTTATACTGAATTGGAAGGCTACCCCATGCTTTTCAGTGATCTATTTCATTaGGGCCACAGTAGGGTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLINGAIYTELEGYPMLFSDLFH*GHSRVR Trigger: TCTTACCCTACTGTGGCCCCAATGAAATAGATCACT...GAAAAGCATGGGGTAGCCTTCCAATTCAGTATAAATGGCTCCATTAATCAAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR CAA 72 bp | GAGAAAAGAAGAAAGACGAAAGTTTTACTGGGACATTaGTACAGAGACAGGTTGCAGAGAGAACAAGCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: EKRRKTKVLLGH*YRDRLQREQAR Trigger: TCTAGCTTGTTCTCTCTGCAACCTGTCTCTGTACAAATGTCCCAGTAAAACTTTCGTCTTTCTTCTTTTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| 3UTR CAA 72 bp | GTGCTGGAAATTAGAACTAAGGTCCTATACAGCAAATaGTCTTACCTGCTAACATTCTTCCCAAACTCATTA | + |
|
Preference number: 4 (lower is better) Translates to: VLEIRTKVLYSK*SYLLTFFPNSL Trigger: TAATGAGTTTGGGAAGAATGTTAGCAGGTAAGACAATTTGCTGTATAGGACCTTAGTTCTAATTTCCAGCAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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| CDS GCA 90 bp | GAGAAATTGACCAAAGGAATGCAGAAATCCCCCAGCACAGGAAGCTaGAATCACAGCATCACACTTCTGCCTGCTCATAAGGATGGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: EKLTKGMQKSPSTGS*NHSITLLPAHKDGV Trigger: TACACCATCCTTATGAGCAGGCAGAAGTGTGATGCTGTGATTGCAGCTTCCTGTGCTGGGGGATTTCTGCATTCCTTTGGTCAATTTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075640.2 ENSMUST00000214040.3 |
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| CDS-3UTR CAA 90 bp | TCATCACCAAGGAAGTCAGGACTGGAACTCAAGCAGGTAAGAAAGCAGGAGCTGGACTGCCAGGAGAAATaGACCAAAGGAATGCAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: SSPRKSGLELKQVRKQELDCQEK*TKGMQK Trigger: TTTCTGCATTCCTTTGGTCAATTTCTCCTGGCAGTC...CAGCTCCTGCTTTCTTACCTGCTTGAGTTCCAGTCCTGACTTCCTTGGTGATGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214040.3 |
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