Pregenerated sensors for OLFR1176 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050023Ensembl transcript IDs: ENSMUST00000057439.5, ENSMUST00000213778.2
Found 27 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CATATTGCTCTTACAAAGGATGTGACTTCGTGCCCCAACACCCACACTGGGCATTCTTTTACTGTTTGCTaGAGGAAGAAACAAAGGGAA | + |
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Preference number: 2 (lower is better) Translates to: HIALTKDVTSCPNTHTGHSFTVC*RKKQRE Trigger: TTCCCTTTGTTTCTTCCTCCAGCAAACAGTAAAAGA...ATGCCCAGTGTGGGTGTTGGGGCACGAAGTCACATCCTTTGTAAGAGCAATATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213778.2 |
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| 3UTR-3UTR GCA 90 bp | AGAACACATATTGCTCTTACAAAGGATGTGACTTCGTGCCCCAACACCCACACTTGCTCTTTTACTGTTTaGTGGAGGAAGAAACAAAGG | + |
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Preference number: 2 (lower is better) Translates to: RTHIALTKDVTSCPNTHTCSFTV*WRKKQR Trigger: CCTTTGTTTCTTCCTCCAGCAAACAGTAAAAGAGCA...AGTGTGGGTGTTGGGGCACGAAGTCACATCCTTTGTAAGAGCAATATGTGTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213778.2 |
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| 3UTR-3UTR TCA 90 bp | AGAACACATATTGCTCTTACAAAGGATGTGACTTCGTGCCCCAACACCCACACTTCATGTGAAGTTTGTTaGGTGTCACTGGAAGTAATA | + |
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Preference number: 2 (lower is better) Translates to: RTHIALTKDVTSCPNTHTSCEVC*VSLEVI Trigger: TATTACTTCCAGTGACACTCAACAAACTTCACATGA...AGTGTGGGTGTTGGGGCACGAAGTCACATCCTTTGTAAGAGCAATATGTGTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213778.2 |
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| 3UTR-3UTR GCA 90 bp | CCACAGTGTAGTTCTTTCTTAGTGAGGGAAGATAGAAAAATTGGCACTAAATCTTCACTGGAAGTAATATaGTCTTTTACTGTTTGCTGG | + |
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Preference number: 2 (lower is better) Translates to: PQCSSFLVREDRKIGTKSSLEVI*SFTVCW Trigger: CCAGCAAACAGTAAAAGAGCATATTACTTCCAGTGA...AGATTTAGTGCCAATTTTTCTATCTTCCCTCACTAAGAAAGAACTACACTGTGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213778.2 |
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| 3UTR GCA 72 bp | AGAACACATATTGCTCTTACAAAGGATGTGACTTCGTaGCCCAACACCCACACTGGGCATCCCACAGCTGAC | + |
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Preference number: 3 (lower is better) Translates to: RTHIALTKDVTS*PNTHTGHPTAD Trigger: GTCAGCTGTGGGATGCCCAGTGTGGGTGTTGGGGCACGAAGTCACATCCTTTGTAAGAGCAATATGTGTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213778.2 |
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| 3UTR-3UTR CAA 90 bp | AGAACACATATTGCTCTTACAAAGGATGTGACTTCGTGCCCCAACACCCACACTGACACTCATATGTCTTaGAAGTACTTCCAAAAGGAA | + |
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Preference number: 3 (lower is better) Translates to: RTHIALTKDVTSCPNTHTDTHMS*KYFQKE Trigger: TTCCTTTTGGAAGTACTTCAAAGACATATGAGTGTC...AGTGTGGGTGTTGGGGCACGAAGTCACATCCTTTGTAAGAGCAATATGTGTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213778.2 |
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| 3UTR-3UTR CAA 90 bp | TCTACCACTGAAATCAGGAGAATGGTGATTAAAATAAAAACACAGGCTGGGAGACCATTGAAGAAATGTTaGGTGCATCCTGTGAAGGAA | + |
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Preference number: 3 (lower is better) Translates to: STTEIRRMVIKIKTQAGRPLKKC*VHPVKE Trigger: TTCCTTCACAGGATGCACCAAACATTTCTTCAATGG...TCTCCCAGCCTGTGTTTTTATTTTAATCACCATTCTCCTGATTTCAGTGGTAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213778.2 |
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| 3UTR TCA 72 bp | GGGAAGATAGAAAAATTGGCACTAAATCTGATCATGTaGAGTTTGTTGAGTGTCACTGGAAGTAATATGCTC | + |
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Preference number: 3 (lower is better) Translates to: GKIEKLALNLIM*SLLSVTGSNML Trigger: GAGCATATTACTTCCAGTGACACTCAACAAACTTCACATGATCAGATTTAGTGCCAATTTTTCTATCTTCCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213778.2 |
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| 3UTR-3UTR CAA 90 bp | AGTGCTATCAAGCTTACAGTAGTATTTTGTGAATATAGTCCTGTGAGAGGATCAGGGAAGATAGAAAAATaGGCACTAAATCTGATCATG | + |
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Preference number: 3 (lower is better) Translates to: SAIKLTVVFCEYSPVRGSGKIEK*ALNLIM Trigger: CATGATCAGATTTAGTGCCAATTTTTCTATCTTCCC...TGATCCTCTCACAGGACTATATTCACAAAATACTACTGTAAGCTTGATAGCACT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213778.2 |
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| CDS-3UTR CCA 90 bp | AGAGATAGGGTGAAGAACACATATTGCTCTTACAAAGGATGTGACTTCGTGCCCAGGAGAATAATCCCATaGCAGAAAGAGATGGCAGTC | + |
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Preference number: 4 (lower is better) Translates to: RDRVKNTYCSYKGCDFVPRRIIP*QKEMAV Trigger: GACTGCCATCTCTTTCTGCCATGGGATTATTCTCCT...GGGCACGAAGTCACATCCTTTGTAAGAGCAATATGTGTTCTTCACCCTATCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213778.2 |
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| CDS-3UTR GCA 90 bp | AGAACACATATTGCTCTTACAAAGGATGTGACTTCGTGCCCCAACACCCACACTAGAATCAGAACAGGCTaGAGAAATTATGGCAGAGTA | + |
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Preference number: 4 (lower is better) Translates to: RTHIALTKDVTSCPNTHTRIRTG*RNYGRV Trigger: TACTCTGCCATAATTTCTGCAGCCTGTTCTGATTCT...AGTGTGGGTGTTGGGGCACGAAGTCACATCCTTTGTAAGAGCAATATGTGTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213778.2 |
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| CDS-3UTR CCA 90 bp | CTGGAGGAAGAAACAAAGGGAATTATCACCCATGTGTACTCTTATATGAATGTAAATATGTTAGTGTGGTaGCACAGAGCCCACCCCATA | + |
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Preference number: 4 (lower is better) Translates to: LEEETKGIITHVYSYMNVNMLVW*HRAHPI Trigger: TATGGGGTGGGCTCTGTGCCACCACACTAACATATT...TACATTCATATAAGAGTACACATGGGTGATAATTCCCTTTGTTTCTTCCTCCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213778.2 |
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| CDS-3UTR CCA 90 bp | AACCAGCAGTTAGATACTGTGGTTAAATGGAAAGTTATAAATGCTATAATGCCCGAAAATATGTTAGTGTaGTGGCACAGAGCCCACCCC | + |
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Preference number: 4 (lower is better) Translates to: NQQLDTVVKWKVINAIMPENMLV*WHRAHP Trigger: GGGGTGGGCTCTGTGCCACCACACTAACATATTTTC...GGGCATTATAGCATTTATAACTTTCCATTTAACCACAGTATCTAACTGCTGGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213778.2 |
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| CDS-3UTR CCA 90 bp | AGTGCTATCAAGCTTACAGTAGTATTTTGTGAATATAGTCCTGTGAGAGGATCAGCTAACATGAAGTTTTaGGTAACCACACAAGCACAG | + |
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Preference number: 4 (lower is better) Translates to: SAIKLTVVFCEYSPVRGSANMKF*VTTQAQ Trigger: CTGTGCTTGTGTGGTTACCCAAAACTTCATGTTAGC...TGATCCTCTCACAGGACTATATTCACAAAATACTACTGTAAGCTTGATAGCACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213778.2 |
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| 3UTR CAA 72 bp | TTGAGTGTCACTGGAAGTAATATGCTCTTTTACTGTTaGCTGGAGGAAGAAACAAAGGGAATTATCACCCAT | + |
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Preference number: 4 (lower is better) Translates to: LSVTGSNMLFYC*LEEETKGIITH Trigger: ATGGGTGATAATTCCCTTTGTTTCTTCCTCCAGCAAACAGTAAAAGAGCATATTACTTCCAGTGACACTCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213778.2 |
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| CDS-3UTR CCA 90 bp | AGTGCTATCAAGCTTACAGTAGTATTTTGTGAATATAGTCCTGTGAGAGGATCAAACAAGCACGCTATCTaGCTGATAGAAGAATCAGAA | + |
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Preference number: 4 (lower is better) Translates to: SAIKLTVVFCEYSPVRGSNKHAI*LIEESE Trigger: TTCTGATTCTTCTATCAGCCAGATAGCGTGCTTGTT...TGATCCTCTCACAGGACTATATTCACAAAATACTACTGTAAGCTTGATAGCACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213778.2 |
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| CDS-3UTR CCA 90 bp | TCTACCACTGAAATCAGGAGAATGGTGATTAAAATAAAAACACAGGCTGGGAGATACTCACAGCAAAAGTaGTTAATGATGGAAGATCTA | + |
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Preference number: 4 (lower is better) Translates to: STTEIRRMVIKIKTQAGRYSQQK*LMMEDL Trigger: TAGATCTTCCATCATTAACCACTTTTGCTGTGAGTA...TCTCCCAGCCTGTGTTTTTATTTTAATCACCATTCTCCTGATTTCAGTGGTAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000213778.2 |
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| CDS-3UTR TCA 90 bp | AACCAGCAGTTAGATACTGTGGTTAAATGGAAAGTTATAAATGCTATAATGCCCGGCTACAAATCTCATTaGACATGCAAATTAACAAGC | + |
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Preference number: 4 (lower is better) Translates to: NQQLDTVVKWKVINAIMPGYKSH*TCKLTS Trigger: GCTTGTTAATTTGCATGTTCAATGAGATTTGTAGCC...GGGCATTATAGCATTTATAACTTTCCATTTAACCACAGTATCTAACTGCTGGTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213778.2 |
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| 3UTR CAA 72 bp | AGAGGAAATAAGTCAGAAGGAGACACTCATATGTCTTaGAAGTACTTCCAAAAGGAAATAGTACAAGAAAGC | + |
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Preference number: 4 (lower is better) Translates to: RGNKSEGDTHMS*KYFQKEIVQES Trigger: GCTTTCTTGTACTATTTCCTTTTGGAAGTACTTCAAAGACATATGAGTGTCTCCTTCTGACTTATTTCCTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213778.2 |
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| CDS CCA 90 bp | AAGATCTACAGTAAGATAATGCCAATAGAAAATATGTTAGTGTGGTaGCACAGAGCCCACCCCATAGGTAAGTTCCAGTTACTAGGAGAG | + |
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Preference number: 5 (lower is better) Translates to: KIYSKIMPIENMLVW*HRAHPIGKFQLLGE Trigger: CTCTCCTAGTAACTGGAACTTACCTATGGGGTGGGCTCTGTGCCACCACACTAACATATTTTCTATTGGCATTATCTTACTGTAGATCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057439.5 ENSMUST00000213778.2 |
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| CDS CCA 90 bp | TGGAAGATCTACAGTAAGATAATGCCAATAGAAAATATGTTAGTGTaGTGGCACAGAGCCCACCCCATAGGTAAGTTCCAGTTACTAGGA | + |
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Preference number: 5 (lower is better) Translates to: WKIYSKIMPIENMLV*WHRAHPIGKFQLLG Trigger: TCCTAGTAACTGGAACTTACCTATGGGGTGGGCTCTGTGCCACCACACTAACATATTTTCTATTGGCATTATCTTACTGTAGATCTTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057439.5 ENSMUST00000213778.2 |
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| CDS CCA 72 bp | TACAGTAAGATAATGCCAATAGAAAATATGTTAGTGTaGTGGCACAGAGCCCACCCCATAGGTAAGTTCCAG | + |
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Preference number: 6 (lower is better) Translates to: YSKIMPIENMLV*WHRAHPIGKFQ Trigger: CTGGAACTTACCTATGGGGTGGGCTCTGTGCCACCACACTAACATATTTTCTATTGGCATTATCTTACTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057439.5 ENSMUST00000213778.2 |
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| CDS TCA 72 bp | AAGCACAGCCAAAGTAAAACTGAATTATGCATCCTTTaGGGGACATGGATCTGTCCTCTGTTATCAGAAGGT | + |
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Preference number: 6 (lower is better) Translates to: KHSQSKTELCIL*GTWICPLLSEG Trigger: ACCTTCTGATAACAGAGGACAGATCCATGTCCCTCAAAGGATGCATAATTCAGTTTTACTTTGGCTGTGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057439.5 ENSMUST00000213778.2 |
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| CDS CCA 72 bp | AGTAAGATAATGCCAATAGAAAATATGTTAGTGTGGTaGCACAGAGCCCACCCCATAGGTAAGTTCCAGTTA | + |
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Preference number: 6 (lower is better) Translates to: SKIMPIENMLVW*HRAHPIGKFQL Trigger: TAACTGGAACTTACCTATGGGGTGGGCTCTGTGCCACCACACTAACATATTTTCTATTGGCATTATCTTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057439.5 ENSMUST00000213778.2 |
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| CDS CAA 72 bp | TGGATCTGTCCTCTGTTATCAGAAGGTCTAACAGTTTaGGGGCAATCACAGTGGTGTAACAAAGATCAACAA | + |
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Preference number: 6 (lower is better) Translates to: WICPLLSEGLTV*GQSQWCNKDQQ Trigger: TTGTTGATCTTTGTTACACCACTGTGATTGCCCCAAAACTGTTAGACCTTCTGATAACAGAGGACAGATCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057439.5 ENSMUST00000213778.2 |
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| CDS CCA 72 bp | ATCTCATTGAACATGCAAATTAACAAGCACGCTATCTaGCTGATAGAAGAATCAGAACAGGCTGCAGAAATT | + |
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Preference number: 6 (lower is better) Translates to: ISLNMQINKHAI*LIEESEQAAEI Trigger: AATTTCTGCAGCCTGTTCTGATTCTTCTATCAGCCAGATAGCGTGCTTGTTAATTTGCATGTTCAATGAGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057439.5 ENSMUST00000213778.2 |
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| CDS CAA 72 bp | TATGAGACAATGATGATAAGGAGGCTACAAATCTCATaGAACATGCAAATTAACAAGCACGCTATCTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: YETMMIRRLQIS*NMQINKHAIWL Trigger: CAGCCAGATAGCGTGCTTGTTAATTTGCATGTTCAATGAGATTTGTAGCCTCCTTATCATCATTGTCTCATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057439.5 ENSMUST00000213778.2 |
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