Pregenerated sensors for OLFR1175 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000083855Ensembl transcript IDs: ENSMUST00000214207.2
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATAGGTCAGAGATGTGACTATGGGATGGCAACCCCATCCCTCACTTaGTGCCCTATCTTCCTGCTACAGGTGGGCTCTATATGTTTCCTC | + |
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Preference number: 1 (lower is better) Translates to: IGQRCDYGMATPSLT*CPIFLLQVGSICFL Trigger: GAGGAAACATATAGAGCCCACCTGTAGCAGGAAGATAGGGCATCAAGTGAGGGATGGGGTTGCCATCCCATAGTCACATCTCTGACCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
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| 3UTR GCA 90 bp | ACTATGGGATGGCAACCCCATCCCTCACTTGATGCCCTATCTTCCTaGTACAGGTGGGCTCTATATGTTTCCTCTACCTACTGTAGGACA | + |
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Preference number: 1 (lower is better) Translates to: TMGWQPHPSLDALSS*YRWALYVSSTYCRT Trigger: TGTCCTACAGTAGGTAGAGGAAACATATAGAGCCCACCTGTAGCAGGAAGATAGGGCATCAAGTGAGGGATGGGGTTGCCATCCCATAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
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| 3UTR GCA 90 bp | GAGTCTGGTGCAGGTGTAGCAACTCCAGATTGGCCGGGCTGTGGTTaGTGGAGAGATTTTCTGACTCTTTCTCAGCAACCAATATCACAA | + |
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Preference number: 1 (lower is better) Translates to: ESGAGVATPDWPGCG*WRDFLTLSQQPISQ Trigger: TTGTGATATTGGTTGCTGAGAAAGAGTCAGAAAATCTCTCCAGCAACCACAGCCCGGCCAATCTGGAGTTGCTACACCTGCACCAGACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
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| 3UTR CCA 90 bp | GAAAGAGTCTGGTGCAGGTGTAGCAACTCCAGATTGGCCGGGCTGTaGTTGCTGGAGAGATTTTCTGACTCTTTCTCAGCAACCAATATC | + |
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Preference number: 1 (lower is better) Translates to: ERVWCRCSNSRLAGL*LLERFSDSFSATNI Trigger: GATATTGGTTGCTGAGAAAGAGTCAGAAAATCTCTCCAGCAACCACAGCCCGGCCAATCTGGAGTTGCTACACCTGCACCAGACTCTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
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| 3UTR CCA 90 bp | TCTGGTGCAGGTGTAGCAACTCCAGATTGGCCGGGCTGTGGTTGCTaGAGAGATTTTCTGACTCTTTCTCAGCAACCAATATCACAAACA | + |
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Preference number: 1 (lower is better) Translates to: SGAGVATPDWPGCGC*RDFLTLSQQPISQT Trigger: TGTTTGTGATATTGGTTGCTGAGAAAGAGTCAGAAAATCTCTCCAGCAACCACAGCCCGGCCAATCTGGAGTTGCTACACCTGCACCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
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| 3UTR TCA 90 bp | TTCATCAGTGGGCACACACATGGGTTCAAGGAATGGTCAAAACATTaGCAGACACACAGGTTCAAGGAGTGGCCAGAGCATTTTGCACCT | + |
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Preference number: 1 (lower is better) Translates to: FISGHTHGFKEWSKH*QTHRFKEWPEHFAP Trigger: AGGTGCAAAATGCTCTGGCCACTCCTTGAACCTGTGTGTCTGTCAATGTTTTGACCATTCCTTGAACCCATGTGTGTGCCCACTGATGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
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| 3UTR TCA 90 bp | ACCCCTGTAATTCTTTCAGACAGGAACAACTATAGGTCAGAGATGTaGCTATGGGATGGCAACCCCATCCCTCACTTGATGCCCTATCTT | + |
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Preference number: 1 (lower is better) Translates to: TPVILSDRNNYRSEM*LWDGNPIPHLMPYL Trigger: AAGATAGGGCATCAAGTGAGGGATGGGGTTGCCATCCCATAGTCACATCTCTGACCTATAGTTGTTCCTGTCTGAAAGAATTACAGGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
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| 3UTR CCA 90 bp | TGGCAACCCCATCCCTCACTTGATGCCCTATCTTCCTGCTACAGGTaGGCTCTATATGTTTCCTCTACCTACTGTAGGACATTTCATATA | + |
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Preference number: 1 (lower is better) Translates to: WQPHPSLDALSSCYR*ALYVSSTYCRTFHI Trigger: TATATGAAATGTCCTACAGTAGGTAGAGGAAACATATAGAGCCCACCTGTAGCAGGAAGATAGGGCATCAAGTGAGGGATGGGGTTGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
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| 3UTR CCA 90 bp | TCTCAGCAACCAATATCACAAACACCTGGCAATGGGCTTCATCAGTaGGCACACACATGGGTTCAAGGAATGGTCAAAACATTGACAGAC | + |
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Preference number: 1 (lower is better) Translates to: SQQPISQTPGNGLHQ*AHTWVQGMVKTLTD Trigger: GTCTGTCAATGTTTTGACCATTCCTTGAACCCATGTGTGTGCCCACTGATGAAGCCCATTGCCAGGTGTTTGTGATATTGGTTGCTGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
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| 3UTR TCA 90 bp | TCTCTAGCACAGGACCACCAAAAAGACACCATATACCAGCTGATATaGGTTACCAACACACATACAGTAGAGGACTTCCAGGTCTCTGCT | + |
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Preference number: 1 (lower is better) Translates to: SLAQDHQKDTIYQLI*VTNTHTVEDFQVSA Trigger: AGCAGAGACCTGGAAGTCCTCTACTGTATGTGTGTTGGTAACTCATATCAGCTGGTATATGGTGTCTTTTTGGTGGTCCTGTGCTAGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
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| 3UTR GCA 90 bp | ATGACTGACACCCAAAAGATTCAACAAGCAGCTGAAAGAGTCAGATaGAGATATTTGCACCCAACCAGTGGACAGAAGCAACAGACTGCT | + |
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Preference number: 1 (lower is better) Translates to: MTDTQKIQQAAERVR*RYLHPTSGQKQQTA Trigger: AGCAGTCTGTTGCTTCTGTCCACTGGTTGGGTGCAAATATCTGCATCTGACTCTTTCAGCTGCTTGTTGAATCTTTTGGGTGTCAGTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
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| 3UTR GCA 90 bp | TCCCCCAACCTCCTATTTTCTGAACTTGTCTGTATACATTATTTCTaGTGGCCCTCAGGGCTTCTTACTGTGGCTATCAGGAACTCACAA | + |
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Preference number: 1 (lower is better) Translates to: SPNLLFSELVCIHYF*WPSGLLTVAIRNSQ Trigger: TTGTGAGTTCCTGATAGCCACAGTAAGAAGCCCTGAGGGCCAGCAGAAATAATGTATACAGACAAGTTCAGAAAATAGGAGGTTGGGGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
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| 3UTR GCA 90 bp | CCAACCAGGTCACACCTATTCCAAAAAGGCCACACCTCAAAATGGTaGCACTCCTTTGTCCAAGAATATACAAACCATCACACCAACACA | + |
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Preference number: 1 (lower is better) Translates to: PTRSHLFQKGHTSKW*HSFVQEYTNHHTNT Trigger: TGTGTTGGTGTGATGGTTTGTATATTCTTGGACAAAGGAGTGGCACCATTTTGAGGTGTGGCCTTTTTGGAATAGGTGTGACCTGGTTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
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| 3UTR CCA 90 bp | GAGAGATTTTCTGACTCTTTCTCAGCAACCAATATCACAAACACCTaGCAATGGGCTTCATCAGTGGGCACACACATGGGTTCAAGGAAT | + |
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Preference number: 1 (lower is better) Translates to: ERFSDSFSATNITNT*QWASSVGTHMGSRN Trigger: ATTCCTTGAACCCATGTGTGTGCCCACTGATGAAGCCCATTGCCAGGTGTTTGTGATATTGGTTGCTGAGAAAGAGTCAGAAAATCTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
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| 3UTR CCA 90 bp | CCCAACCTCCTATTTTCTGAACTTGTCTGTATACATTATTTCTGCTaGCCCTCAGGGCTTCTTACTGTGGCTATCAGGAACTCACAAAAA | + |
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Preference number: 1 (lower is better) Translates to: PNLLFSELVCIHYFC*PSGLLTVAIRNSQK Trigger: TTTTTGTGAGTTCCTGATAGCCACAGTAAGAAGCCCTGAGGGCCAGCAGAAATAATGTATACAGACAAGTTCAGAAAATAGGAGGTTGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
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| 3UTR TCA 90 bp | GCTTCTTACTGTGGCTATCAGGAACTCACAAAAAGGGATCTATCATaGCTGACACCCAAAAGATTCAACAAGCAGCTGAAAGAGTCAGAT | + |
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Preference number: 1 (lower is better) Translates to: ASYCGYQELTKRDLS*LTPKRFNKQLKESD Trigger: ATCTGACTCTTTCAGCTGCTTGTTGAATCTTTTGGGTGTCAGTCATGATAGATCCCTTTTTGTGAGTTCCTGATAGCCACAGTAAGAAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
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| 3UTR GCA 90 bp | CAAGAATATACAAACCATCACACCAACACACCTAGTCCGGCTTTCTaGTCCATATGCAACTATATTGGACTAACCGATTCCCAAATGTTT | + |
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Preference number: 1 (lower is better) Translates to: QEYTNHHTNTPSPAF*SICNYIGLTDSQMF Trigger: AAACATTTGGGAATCGGTTAGTCCAATATAGTTGCATATGGAGCAGAAAGCCGGACTAGGTGTGTTGGTGTGATGGTTTGTATATTCTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
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| 3UTR GCA 90 bp | ACAATAGGGAATCTGAGACTACAGAGCTACTTCACTATAATGAAATaGTGTTCCAAACAGGAAAACAAAGACAACAAGAGGAATGATAGT | + |
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Preference number: 1 (lower is better) Translates to: TIGNLRLQSYFTIMK*CSKQENKDNKRNDS Trigger: ACTATCATTCCTCTTGTTGTCTTTGTTTTCCTGTTTGGAACAGCATTTCATTATAGTGAAGTAGCTCTGTAGTCTCAGATTCCCTATTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
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| 3UTR-3UTR CCA 90 bp | ATCCCACGCAGGGGTAGAGGAGTCTACCACAAGGGGAAAGAGGTCCCAGTTTTTAGAGGTCAGGTGGGATaGGGTTGGGAGCATGTACAT | + |
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Preference number: 2 (lower is better) Translates to: IPRRGRGVYHKGKEVPVFRGQVG*GWEHVH Trigger: ATGTACATGCTCCCAACCCCATCCCACCTGACCTCT...AAAAACTGGGACCTCTTTCCCCTTGTGGTAGACTCCTCTACCCCTGCGTGGGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
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| 3UTR-3UTR TCA 90 bp | ATCCCACGCAGGGGTAGAGGAGTCTACCACAAGGGGAAAGAGGTCCCAGTTTTTTGGTGCAGGCAGAGCTaGGAGTTTTACACCTTCATC | + |
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Preference number: 2 (lower is better) Translates to: IPRRGRGVYHKGKEVPVFWCRQS*EFYTFI Trigger: GATGAAGGTGTAAAACTCTCAGCTCTGCCTGCACCA...AAAAACTGGGACCTCTTTCCCCTTGTGGTAGACTCCTCTACCCCTGCGTGGGAT 52% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
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| 3UTR-3UTR CCA 90 bp | ATCCCACGCAGGGGTAGAGGAGTCTACCACAAGGGGAAAGAGGTCCCAGTTTTTGATGTGACTATGGGATaGCAACCCCATCCCTCACTT | + |
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Preference number: 2 (lower is better) Translates to: IPRRGRGVYHKGKEVPVFDVTMG*QPHPSL Trigger: AAGTGAGGGATGGGGTTGCCATCCCATAGTCACATC...AAAAACTGGGACCTCTTTCCCCTTGTGGTAGACTCCTCTACCCCTGCGTGGGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
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| 3UTR CAA 90 bp | AGAGTCTGGTGCAGGTGTAGCAACTCCAGATTGGCCGGGCTGTGGTaGCTGGAGAGATTTTCTGACTCTTTCTCAGCAACCAATATCACA | + |
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Preference number: 2 (lower is better) Translates to: RVWCRCSNSRLAGLW*LERFSDSFSATNIT Trigger: TGTGATATTGGTTGCTGAGAAAGAGTCAGAAAATCTCTCCAGCAACCACAGCCCGGCCAATCTGGAGTTGCTACACCTGCACCAGACTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
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| 3UTR-3UTR TCA 90 bp | CCTATCACAGCAATACCCCAGTCCCTGGTACTAATGTCTGTCTTAGTTAGGGCTACCCCATCCCTCACTTaGTGCCCTATCTTCCTGCTA | + |
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Preference number: 2 (lower is better) Translates to: PITAIPQSLVLMSVLVRATPSLT*CPIFLL Trigger: TAGCAGGAAGATAGGGCATCAAGTGAGGGATGGGGT...AGCCCTAACTAAGACAGACATTAGTACCAGGGACTGGGGTATTGCTGTGATAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
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| 3UTR-3UTR TCA 90 bp | ATCCCACGCAGGGGTAGAGGAGTCTACCACAAGGGGAAAGAGGTCCCAGTTTTTCTATGTTTCAGTAGATaGTCTGCCTTCCGAGTTCCT | + |
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Preference number: 2 (lower is better) Translates to: IPRRGRGVYHKGKEVPVFLCFSR*SAFRVP Trigger: AGGAACTCGGAAGGCAGATCATCTACTGAAACATAG...AAAAACTGGGACCTCTTTCCCCTTGTGGTAGACTCCTCTACCCCTGCGTGGGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
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| 3UTR-3UTR CCA 90 bp | CCTATCACAGCAATACCCCAGTCCCTGGTACTAATGTCTGTCTTAGTTAGGGCTAGTTTAGAGGTCAGGTaGGATGGGGTTGGGAGCATG | + |
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Preference number: 2 (lower is better) Translates to: PITAIPQSLVLMSVLVRASLEVR*DGVGSM Trigger: CATGCTCCCAACCCCATCCCACCTGACCTCTAAACT...AGCCCTAACTAAGACAGACATTAGTACCAGGGACTGGGGTATTGCTGTGATAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
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| 3UTR-3UTR CCA 90 bp | ATCCCACGCAGGGGTAGAGGAGTCTACCACAAGGGGAAAGAGGTCCCAGTTTTTTCTGCTCAAAAGGGTTaGCTAATACCCAGGGATTAC | + |
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Preference number: 2 (lower is better) Translates to: IPRRGRGVYHKGKEVPVFSAQKG*LIPRDY Trigger: GTAATCCCTGGGTATTAGCCAACCCTTTTGAGCAGA...AAAAACTGGGACCTCTTTCCCCTTGTGGTAGACTCCTCTACCCCTGCGTGGGAT 50% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
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| 3UTR CAA 90 bp | CTTCATCAGTGGGCACACACATGGGTTCAAGGAATGGTCAAAACATaGACAGACACACAGGTTCAAGGAGTGGCCAGAGCATTTTGCACC | + |
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Preference number: 2 (lower is better) Translates to: LHQWAHTWVQGMVKT*TDTQVQGVARAFCT Trigger: GGTGCAAAATGCTCTGGCCACTCCTTGAACCTGTGTGTCTGTCAATGTTTTGACCATTCCTTGAACCCATGTGTGTGCCCACTGATGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
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| 3UTR CAA 90 bp | CACACCTATTCCAAAAAGGCCACACCTCAAAATGGTGCCACTCCTTaGTCCAAGAATATACAAACCATCACACCAACACACCTAGTCCGG | + |
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Preference number: 2 (lower is better) Translates to: HTYSKKATPQNGATP*SKNIQTITPTHLVR Trigger: CCGGACTAGGTGTGTTGGTGTGATGGTTTGTATATTCTTGGACAAAGGAGTGGCACCATTTTGAGGTGTGGCCTTTTTGGAATAGGTGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
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| 3UTR-3UTR TCA 90 bp | ACAGCAATACCCCAGTCCCTGGTACTAATGTCTGTCTTAGTTAGGGCTTTACTGTCTTGGAAGGTGCTCTaGGTCATAGATGCCTACTTG | + |
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Preference number: 2 (lower is better) Translates to: TAIPQSLVLMSVLVRALLSWKVL*VIDAYL Trigger: CAAGTAGGCATCTATGACTCAGAGCACCTTCCAAGA...CAGTAAAGCCCTAACTAAGACAGACATTAGTACCAGGGACTGGGGTATTGCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
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| 3UTR-3UTR GCA 90 bp | CCTATCACAGCAATACCCCAGTCCCTGGTACTAATGTCTGTCTTAGTTAGGGCTTCAGATGCAGATATTTaGACCCAACCAGTGGACAGA | + |
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Preference number: 2 (lower is better) Translates to: PITAIPQSLVLMSVLVRASDADI*TQPVDR Trigger: TCTGTCCACTGGTTGGGTGCAAATATCTGCATCTGA...AGCCCTAACTAAGACAGACATTAGTACCAGGGACTGGGGTATTGCTGTGATAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
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| 3UTR-3UTR GCA 90 bp | CCTATCACAGCAATACCCCAGTCCCTGGTACTAATGTCTGTCTTAGTTAGGGCTGCTCTGAGTCATAGATaGCTACTTGCTATCTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: PITAIPQSLVLMSVLVRAALSHR*LLAISG Trigger: TCCTGAGATAGCAAGTAGGCATCTATGACTCAGAGC...AGCCCTAACTAAGACAGACATTAGTACCAGGGACTGGGGTATTGCTGTGATAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
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| 3UTR-3UTR CCA 90 bp | ATCCCACGCAGGGGTAGAGGAGTCTACCACAAGGGGAAAGAGGTCCCAGTTTTTCATGGGGCTAAAGTGTaGTCTTACAAGATATTTATG | + |
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Preference number: 2 (lower is better) Translates to: IPRRGRGVYHKGKEVPVFHGAKV*SYKIFM Trigger: CATAAATATCTTGTAAGACCACACTTTAGCCCCATG...AAAAACTGGGACCTCTTTCCCCTTGTGGTAGACTCCTCTACCCCTGCGTGGGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
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| 3UTR-3UTR TCA 90 bp | TTGATTGTTCTGTATAATTCTGCTCAAAAGGGTTGGCTAATACCCAGGGATTACATGGGGACCTCCCCTTaGGGATCTGGTTCCCACTTT | + |
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Preference number: 2 (lower is better) Translates to: LIVLYNSAQKGWLIPRDYMGTSP*GSGSHF Trigger: AAAGTGGGAACCAGATCCTCAAGGGGAGGTCCCCAT...GTAATCCCTGGGTATTAGCCAACCCTTTTGAGCAGAATTATACAGAACAATCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
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| 3UTR-3UTR CCA 90 bp | CCTATCACAGCAATACCCCAGTCCCTGGTACTAATGTCTGTCTTAGTTAGGGCTAAGAGGTGTGAAATATaGAGCAGTCATAGGGTGGAT | + |
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Preference number: 2 (lower is better) Translates to: PITAIPQSLVLMSVLVRAKRCEI*SSHRVD Trigger: ATCCACCCTATGACTGCTCCATATTTCACACCTCTT...AGCCCTAACTAAGACAGACATTAGTACCAGGGACTGGGGTATTGCTGTGATAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
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| 3UTR-3UTR CCA 90 bp | CCTATCACAGCAATACCCCAGTCCCTGGTACTAATGTCTGTCTTAGTTAGGGCTATACATTATTTCTGCTaGCCCTCAGGGCTTCTTACT | + |
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Preference number: 2 (lower is better) Translates to: PITAIPQSLVLMSVLVRAIHYFC*PSGLLT Trigger: AGTAAGAAGCCCTGAGGGCCAGCAGAAATAATGTAT...AGCCCTAACTAAGACAGACATTAGTACCAGGGACTGGGGTATTGCTGTGATAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
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| 3UTR-3UTR TCA 90 bp | TTGATTGTTCTGTATAATTCTGCTCAAAAGGGTTGGCTAATACCCAGGGATTACAAGGCTGAAAGAAGCTaGGGAGAAGGGCCATCCTGT | + |
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Preference number: 2 (lower is better) Translates to: LIVLYNSAQKGWLIPRDYKAERS*GEGPSC Trigger: ACAGGATGGCCCTTCTCCTCAGCTTCTTTCAGCCTT...GTAATCCCTGGGTATTAGCCAACCCTTTTGAGCAGAATTATACAGAACAATCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
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| 3UTR-3UTR CCA 90 bp | GGCTTTACTGCTGTGAACAGACACCATGACCAAGGCAAGTCTTATAAAACAAAATTGGGAGCATGTACATaGAGACATGGAGATGGGGTG | + |
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Preference number: 2 (lower is better) Translates to: GFTAVNRHHDQGKSYKTKLGACT*RHGDGV Trigger: CACCCCATCTCCATGTCTCCATGTACATGCTCCCAA...TTTTGTTTTATAAGACTTGCCTTGGTCATGGTGTCTGTTCACAGCAGTAAAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
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| 3UTR-3UTR CCA 90 bp | GGCTTTACTGCTGTGAACAGACACCATGACCAAGGCAAGTCTTATAAAACAAAATTTGCACCCAACCAGTaGACAGAAGCAACAGACTGC | + |
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Preference number: 2 (lower is better) Translates to: GFTAVNRHHDQGKSYKTKFAPNQ*TEATDC Trigger: GCAGTCTGTTGCTTCTGTCCACTGGTTGGGTGCAAA...TTTTGTTTTATAAGACTTGCCTTGGTCATGGTGTCTGTTCACAGCAGTAAAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
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| 3UTR-3UTR CCA 90 bp | TGGTTGCTGGAGAGATTTTCTGACTCTTTCTCAGCAACCAATATCACAAACACCGCTGCAAAGCAGGGATaGACAATAGGGAATCTGAGA | + |
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Preference number: 2 (lower is better) Translates to: WLLERFSDSFSATNITNTAAKQG*TIGNLR Trigger: TCTCAGATTCCCTATTGTCCATCCCTGCTTTGCAGC...GGTGTTTGTGATATTGGTTGCTGAGAAAGAGTCAGAAAATCTCTCCAGCAACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
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| 3UTR-3UTR CCA 90 bp | TGGTTGCTGGAGAGATTTTCTGACTCTTTCTCAGCAACCAATATCACAAACACCTTAGCTTCTCCTTCTTaGCTCCTGGCAGTCAGTCAT | + |
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Preference number: 2 (lower is better) Translates to: WLLERFSDSFSATNITNTLASPS*LLAVSH Trigger: ATGACTGACTGCCAGGAGCCAAGAAGGAGAAGCTAA...GGTGTTTGTGATATTGGTTGCTGAGAAAGAGTCAGAAAATCTCTCCAGCAACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
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| 3UTR-3UTR CCA 90 bp | GGCTTTACTGCTGTGAACAGACACCATGACCAAGGCAAGTCTTATAAAACAAAAGGCCACACCTCAAAATaGTGCCACTCCTTTGTCCAA | + |
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Preference number: 2 (lower is better) Translates to: GFTAVNRHHDQGKSYKTKGHTSK*CHSFVQ Trigger: TTGGACAAAGGAGTGGCACCATTTTGAGGTGTGGCC...TTTTGTTTTATAAGACTTGCCTTGGTCATGGTGTCTGTTCACAGCAGTAAAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
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| 3UTR-3UTR TCA 90 bp | GGTCCCCCAACCTCCTATTTTCTGAACTTGTCTGTATACATTATTTCTGCTGGCACACCATATACCAGCTaGTATGAGTTACCAACACAC | + |
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Preference number: 2 (lower is better) Translates to: GPPTSYFLNLSVYIISAGTPYTS*YELPTH Trigger: GTGTGTTGGTAACTCATATCAGCTGGTATATGGTGT...GCCAGCAGAAATAATGTATACAGACAAGTTCAGAAAATAGGAGGTTGGGGGACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
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| 3UTR-3UTR GCA 90 bp | TGGTTGCTGGAGAGATTTTCTGACTCTTTCTCAGCAACCAATATCACAAACACCGCTGAAAGAGTCAGATaGAGATATTTGCACCCAACC | + |
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Preference number: 2 (lower is better) Translates to: WLLERFSDSFSATNITNTAERVR*RYLHPT Trigger: GGTTGGGTGCAAATATCTGCATCTGACTCTTTCAGC...GGTGTTTGTGATATTGGTTGCTGAGAAAGAGTCAGAAAATCTCTCCAGCAACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGCAATACCCCAGTCCCTGGTACTAATGTCTGTCTTAGTTAGGGCTTTACTGTTTAATTGTAGTAGCTaGAAAGCAGGGATGGACAAT | + |
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Preference number: 2 (lower is better) Translates to: TAIPQSLVLMSVLVRALLFNCSS*KAGMDN Trigger: ATTGTCCATCCCTGCTTTGCAGCTACTACAATTAAA...CAGTAAAGCCCTAACTAAGACAGACATTAGTACCAGGGACTGGGGTATTGCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
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| 3UTR-3UTR GCA 90 bp | GGCTTTACTGCTGTGAACAGACACCATGACCAAGGCAAGTCTTATAAAACAAAACACACCTCAAAATGGTaGCACTCCTTTGTCCAAGAA | + |
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Preference number: 2 (lower is better) Translates to: GFTAVNRHHDQGKSYKTKHTSKW*HSFVQE Trigger: TTCTTGGACAAAGGAGTGGCACCATTTTGAGGTGTG...TTTTGTTTTATAAGACTTGCCTTGGTCATGGTGTCTGTTCACAGCAGTAAAGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
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| 3UTR-3UTR CCA 90 bp | CCTATCACAGCAATACCCCAGTCCCTGGTACTAATGTCTGTCTTAGTTAGGGCTGCAGGGGATGGAATATaGAGTGTAAGAAATAAATTA | + |
|
Preference number: 2 (lower is better) Translates to: PITAIPQSLVLMSVLVRAAGDGI*SVRNKL Trigger: TAATTTATTTCTTACACTCCATATTCCATCCCCTGC...AGCCCTAACTAAGACAGACATTAGTACCAGGGACTGGGGTATTGCTGTGATAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
||
| 3UTR-3UTR CCA 90 bp | GGCTTTACTGCTGTGAACAGACACCATGACCAAGGCAAGTCTTATAAAACAAAATCTTCCTGCTACAGGTaGGCTCTATATGTTTCCTCT | + |
|
Preference number: 2 (lower is better) Translates to: GFTAVNRHHDQGKSYKTKSSCYR*ALYVSS Trigger: AGAGGAAACATATAGAGCCCACCTGTAGCAGGAAGA...TTTTGTTTTATAAGACTTGCCTTGGTCATGGTGTCTGTTCACAGCAGTAAAGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
||
| 3UTR-3UTR CCA 90 bp | GGCTTTACTGCTGTGAACAGACACCATGACCAAGGCAAGTCTTATAAAACAAAATTGTCCTTGAAGCAGTaGAGGGGTAAGAGGTTTCAT | + |
|
Preference number: 2 (lower is better) Translates to: GFTAVNRHHDQGKSYKTKLSLKQ*RGKRFH Trigger: ATGAAACCTCTTACCCCTCCACTGCTTCAAGGACAA...TTTTGTTTTATAAGACTTGCCTTGGTCATGGTGTCTGTTCACAGCAGTAAAGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
||
| 3UTR-3UTR CCA 90 bp | TGGTTGCTGGAGAGATTTTCTGACTCTTTCTCAGCAACCAATATCACAAACACCGTTCTTCTTTCTTGTTaGTTGTCCTTGAAGCAGTGG | + |
|
Preference number: 2 (lower is better) Translates to: WLLERFSDSFSATNITNTVLLSC*LSLKQW Trigger: CCACTGCTTCAAGGACAACCAACAAGAAAGAAGAAC...GGTGTTTGTGATATTGGTTGCTGAGAAAGAGTCAGAAAATCTCTCCAGCAACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
||
| 3UTR CAA 90 bp | CAAAACATTGACAGACACACAGGTTCAAGGAGTGGCCAGAGCATTTaGCACCTCTATTTTTCTAAATCAGTGAAGCTAGTTCTGCTAACA | + |
|
Preference number: 2 (lower is better) Translates to: QNIDRHTGSRSGQSI*HLYFSKSVKLVLLT Trigger: TGTTAGCAGAACTAGCTTCACTGATTTAGAAAAATAGAGGTGCAAAATGCTCTGGCCACTCCTTGAACCTGTGTGTCTGTCAATGTTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
||
| 3UTR-3UTR GCA 90 bp | GGCTTTACTGCTGTGAACAGACACCATGACCAAGGCAAGTCTTATAAAACAAAATGTATACATTATTTCTaGTGGCCCTCAGGGCTTCTT | + |
|
Preference number: 2 (lower is better) Translates to: GFTAVNRHHDQGKSYKTKCIHYF*WPSGLL Trigger: AAGAAGCCCTGAGGGCCAGCAGAAATAATGTATACA...TTTTGTTTTATAAGACTTGCCTTGGTCATGGTGTCTGTTCACAGCAGTAAAGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
||
| 3UTR-3UTR TCA 90 bp | TTGATTGTTCTGTATAATTCTGCTCAAAAGGGTTGGCTAATACCCAGGGATTACGATTCAACAAGCAGCTaGAAGAGTCAGATGCAGATA | + |
|
Preference number: 2 (lower is better) Translates to: LIVLYNSAQKGWLIPRDYDSTSS*KSQMQI Trigger: TATCTGCATCTGACTCTTTCAGCTGCTTGTTGAATC...GTAATCCCTGGGTATTAGCCAACCCTTTTGAGCAGAATTATACAGAACAATCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
||
| 3UTR-3UTR TCA 90 bp | TTGATTGTTCTGTATAATTCTGCTCAAAAGGGTTGGCTAATACCCAGGGATTACGGGATCTATCATGACTaGCACCCAAAAGATTCAACA | + |
|
Preference number: 2 (lower is better) Translates to: LIVLYNSAQKGWLIPRDYGIYHD*HPKDST Trigger: TGTTGAATCTTTTGGGTGTCAGTCATGATAGATCCC...GTAATCCCTGGGTATTAGCCAACCCTTTTGAGCAGAATTATACAGAACAATCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
||
| 3UTR-3UTR TCA 90 bp | GGCTTTACTGCTGTGAACAGACACCATGACCAAGGCAAGTCTTATAAAACAAAATTCTTACACTGTCCCTaGTACATGATTTATGTTGCG | + |
|
Preference number: 2 (lower is better) Translates to: GFTAVNRHHDQGKSYKTKFLHCP*YMIYVA Trigger: CGCAACATAAATCATGTATCAGGGACAGTGTAAGAA...TTTTGTTTTATAAGACTTGCCTTGGTCATGGTGTCTGTTCACAGCAGTAAAGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
||
| 3UTR-3UTR TCA 90 bp | TGGTTGCTGGAGAGATTTTCTGACTCTTTCTCAGCAACCAATATCACAAACACCTCTGATTTAGAACCCTaGAGTATTATAAGTTGTGGG | + |
|
Preference number: 2 (lower is better) Translates to: WLLERFSDSFSATNITNTSDLEP*SIISCG Trigger: CCCACAACTTATAATACTTCAGGGTTCTAAATCAGA...GGTGTTTGTGATATTGGTTGCTGAGAAAGAGTCAGAAAATCTCTCCAGCAACCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
||
| 3UTR-3UTR CCA 90 bp | GGCTTTACTGCTGTGAACAGACACCATGACCAAGGCAAGTCTTATAAAACAAAAAGATCAACAGATGCATaGAGGATTAAAAACCATAAC | + |
|
Preference number: 2 (lower is better) Translates to: GFTAVNRHHDQGKSYKTKRSTDA*RIKNHN Trigger: GTTATGGTTTTTAATCCTCCATGCATCTGTTGATCT...TTTTGTTTTATAAGACTTGCCTTGGTCATGGTGTCTGTTCACAGCAGTAAAGCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
||
| 3UTR GCA 72 bp | AGGTTCAGCGGTTCAGTCCATTATCATCAAGGTGGGTaGATGGCAGCATCCAGGCTGTCATGGTGCAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: RFSGSVHYHQGG*MAASRLSWCRQ Trigger: CTGCCTGCACCATGACAGCCTGGATGCTGCCATGCACCCACCTTGATGATAATGGACTGAACCGCTGAACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
||
| 3UTR CCA 72 bp | TCAGCGGTTCAGTCCATTATCATCAAGGTGGGTGCATaGCAGCATCCAGGCTGTCATGGTGCAGGCAGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: SAVQSIIIKVGA*QHPGCHGAGRA Trigger: AGCTCTGCCTGCACCATGACAGCCTGGATGCTGCCATGCACCCACCTTGATGATAATGGACTGAACCGCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
||
| 3UTR GCA 72 bp | AAATGGGTATGGGATGGGTACAAGGAAAGAGTCTGGTaGAGGTGTAGCAACTCCAGATTGGCCGGGCTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: KWVWDGYKERVW*RCSNSRLAGLW Trigger: CCACAGCCCGGCCAATCTGGAGTTGCTACACCTGCACCAGACTCTTTCCTTGTACCCATCCCATACCCATTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
||
| 3UTR GCA 72 bp | GCAGGTGTAGCAACTCCAGATTGGCCGGGCTGTGGTTaGTGGAGAGATTTTCTGACTCTTTCTCAGCAACCA | + |
|
Preference number: 3 (lower is better) Translates to: AGVATPDWPGCG*WRDFLTLSQQP Trigger: TGGTTGCTGAGAAAGAGTCAGAAAATCTCTCCAGCAACCACAGCCCGGCCAATCTGGAGTTGCTACACCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
||
| 3UTR CCA 72 bp | CCCTTGAGGATCTGGTTCCCACTTTGGGCCTGTCATTaGACCTTCTTTTCCTCGGGTTCCTCTCCACTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: PLRIWFPLWACH*TFFSSGSSPLL Trigger: TAGAAGTGGAGAGGAACCCGAGGAAAAGAAGGTCCAATGACAGGCCCAAAGTGGGAACCAGATCCTCAAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
||
| 3UTR CCA 72 bp | ACTAGTGTCAGGTATGGGGACCTCCCCTTGAGGATCTaGTTCCCACTTTGGGCCTGTCATTGGACCTTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: TSVRYGDLPLRI*FPLWACHWTFF Trigger: AAAGAAGGTCCAATGACAGGCCCAAAGTGGGAACCAGATCCTCAAGGGGAGGTCCCCATACCTGACACTAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
||
| 3UTR CCA 72 bp | TGGTGCAGGTGTAGCAACTCCAGATTGGCCGGGCTGTaGTTGCTGGAGAGATTTTCTGACTCTTTCTCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: WCRCSNSRLAGL*LLERFSDSFSA Trigger: TGCTGAGAAAGAGTCAGAAAATCTCTCCAGCAACCACAGCCCGGCCAATCTGGAGTTGCTACACCTGCACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
||
| 3UTR CCA 72 bp | AAGAAATGGGTATGGGATGGGTACAAGGAAAGAGTCTaGTGCAGGTGTAGCAACTCCAGATTGGCCGGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: KKWVWDGYKERV*CRCSNSRLAGL Trigger: CAGCCCGGCCAATCTGGAGTTGCTACACCTGCACCAGACTCTTTCCTTGTACCCATCCCATACCCATTTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
||
| 3UTR-3UTR CAA 90 bp | ATCCCACGCAGGGGTAGAGGAGTCTACCACAAGGGGAAAGAGGTCCCAGTTTTTTTTAGCTTCTCCTTCTaGGCTCCTGGCAGTCAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: IPRRGRGVYHKGKEVPVFFSFSF*APGSQS Trigger: TGACTGACTGCCAGGAGCCAAGAAGGAGAAGCTAAA...AAAAACTGGGACCTCTTTCCCCTTGTGGTAGACTCCTCTACCCCTGCGTGGGAT 52% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
||
| 3UTR TCA 72 bp | AGATGTGACTATGGGATGGCAACCCCATCCCTCACTTaGTGCCCTATCTTCCTGCTACAGGTGGGCTCTATA | + |
|
Preference number: 3 (lower is better) Translates to: RCDYGMATPSLT*CPIFLLQVGSI Trigger: TATAGAGCCCACCTGTAGCAGGAAGATAGGGCATCAAGTGAGGGATGGGGTTGCCATCCCATAGTCACATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
||
| 3UTR GCA 72 bp | TGGCAACCCCATCCCTCACTTGATGCCCTATCTTCCTaGTACAGGTGGGCTCTATATGTTTCCTCTACCTAC | + |
|
Preference number: 3 (lower is better) Translates to: WQPHPSLDALSS*YRWALYVSSTY Trigger: GTAGGTAGAGGAAACATATAGAGCCCACCTGTAGCAGGAAGATAGGGCATCAAGTGAGGGATGGGGTTGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
||
| 3UTR-3UTR CAA 90 bp | ATCCCACGCAGGGGTAGAGGAGTCTACCACAAGGGGAAAGAGGTCCCAGTTTTTACAGTGACATCTATCTaGCCAATTTCAGGGCTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: IPRRGRGVYHKGKEVPVFTVTSI*PISGLL Trigger: CAGAAGCCCTGAAATTGGCAAGATAGATGTCACTGT...AAAAACTGGGACCTCTTTCCCCTTGTGGTAGACTCCTCTACCCCTGCGTGGGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
||
| 3UTR TCA 72 bp | GGGCACACACATGGGTTCAAGGAATGGTCAAAACATTaGCAGACACACAGGTTCAAGGAGTGGCCAGAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: GHTHGFKEWSKH*QTHRFKEWPEH Trigger: ATGCTCTGGCCACTCCTTGAACCTGTGTGTCTGTCAATGTTTTGACCATTCCTTGAACCCATGTGTGTGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
||
| 3UTR CCA 72 bp | GGTGTAGCAACTCCAGATTGGCCGGGCTGTGGTTGCTaGAGAGATTTTCTGACTCTTTCTCAGCAACCAATA | + |
|
Preference number: 3 (lower is better) Translates to: GVATPDWPGCGC*RDFLTLSQQPI Trigger: TATTGGTTGCTGAGAAAGAGTCAGAAAATCTCTCCAGCAACCACAGCCCGGCCAATCTGGAGTTGCTACACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAGCAATACCCCAGTCCCTGGTACTAATGTCTGTCTTAGTTAGGGCTTTACTGAACCCCATCCCTCACTaGATGCCCTATCTTCCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: TAIPQSLVLMSVLVRALLNPIPH*MPYLPA Trigger: AGCAGGAAGATAGGGCATCAAGTGAGGGATGGGGTT...CAGTAAAGCCCTAACTAAGACAGACATTAGTACCAGGGACTGGGGTATTGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
||
| 3UTR CCA 72 bp | ACACCTGGCAATGGGCTTCATCAGTGGGCACACACATaGGTTCAAGGAATGGTCAAAACATTGACAGACACA | + |
|
Preference number: 3 (lower is better) Translates to: TPGNGLHQWAHT*VQGMVKTLTDT Trigger: TGTGTCTGTCAATGTTTTGACCATTCCTTGAACCCATGTGTGTGCCCACTGATGAAGCCCATTGCCAGGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
||
| 3UTR CCA 72 bp | TCTTTCTCAGCAACCAATATCACAAACACCTGGCAATaGGCTTCATCAGTGGGCACACACATGGGTTCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: SFSATNITNTWQ*ASSVGTHMGSR Trigger: CCTTGAACCCATGTGTGTGCCCACTGATGAAGCCCATTGCCAGGTGTTTGTGATATTGGTTGCTGAGAAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
||
| 3UTR CCA 72 bp | TCTGACTCTTTCTCAGCAACCAATATCACAAACACCTaGCAATGGGCTTCATCAGTGGGCACACACATGGGT | + |
|
Preference number: 3 (lower is better) Translates to: SDSFSATNITNT*QWASSVGTHMG Trigger: ACCCATGTGTGTGCCCACTGATGAAGCCCATTGCCAGGTGTTTGTGATATTGGTTGCTGAGAAAGAGTCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
||
| 3UTR TCA 72 bp | CAGACTGCTATTGAATTAGACAAGGCTGAAAGAAGCTaGGGAGAAGGGCCATCCTGTAGGAGTACCAACGAT | + |
|
Preference number: 3 (lower is better) Translates to: QTAIELDKAERS*GEGPSCRSTND Trigger: ATCGTTGGTACTCCTACAGGATGGCCCTTCTCCTCAGCTTCTTTCAGCCTTGTCTAATTCAATAGCAGTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
||
| 3UTR CCA 72 bp | ACTGTTCTTCTTTCTTGTTGGTTGTCCTTGAAGCAGTaGAGGGGTAAGAGGTTTCATGGGGCTAAAGTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: TVLLSCWLSLKQ*RGKRFHGAKVW Trigger: CCACACTTTAGCCCCATGAAACCTCTTACCCCTCCACTGCTTCAAGGACAACCAACAAGAAAGAAGAACAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGATTGTTCTGTATAATTCTGCTCAAAAGGGTTGGCTAATACCCAGGGATTACTCAGGTGGGATGGGGTaGGGAGCATGTACATGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: LIVLYNSAQKGWLIPRDYSGGMG*GACTWR Trigger: TCTCCATGTACATGCTCCCAACCCCATCCCACCTGA...GTAATCCCTGGGTATTAGCCAACCCTTTTGAGCAGAATTATACAGAACAATCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGTTGCTGGAGAGATTTTCTGACTCTTTCTCAGCAACCAATATCACAAACACCTCTTGTTGGTTGTCCTaGAAGCAGTGGAGGGGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: WLLERFSDSFSATNITNTSCWLS*KQWRGK Trigger: CTTACCCCTCCACTGCTTCAAGGACAACCAACAAGA...GGTGTTTGTGATATTGGTTGCTGAGAAAGAGTCAGAAAATCTCTCCAGCAACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
||
| 3UTR TCA 72 bp | ATTCTTTCAGACAGGAACAACTATAGGTCAGAGATGTaGCTATGGGATGGCAACCCCATCCCTCACTTGATG | + |
|
Preference number: 3 (lower is better) Translates to: ILSDRNNYRSEM*LWDGNPIPHLM Trigger: CATCAAGTGAGGGATGGGGTTGCCATCCCATAGTCACATCTCTGACCTATAGTTGTTCCTGTCTGAAAGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
||
| 3UTR GCA 72 bp | TTCAACAAGCAGCTGAAAGAGTCAGATGCAGATATTTaGACCCAACCAGTGGACAGAAGCAACAGACTGCTA | + |
|
Preference number: 3 (lower is better) Translates to: FNKQLKESDADI*TQPVDRSNRLL Trigger: TAGCAGTCTGTTGCTTCTGTCCACTGGTTGGGTGCAAATATCTGCATCTGACTCTTTCAGCTGCTTGTTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
||
| 3UTR GCA 72 bp | ACAAACCATCACACCAACACACCTAGTCCGGCTTTCTaGTCCATATGCAACTATATTGGACTAACCGATTCC | + |
|
Preference number: 3 (lower is better) Translates to: TNHHTNTPSPAF*SICNYIGLTDS Trigger: GGAATCGGTTAGTCCAATATAGTTGCATATGGAGCAGAAAGCCGGACTAGGTGTGTTGGTGTGATGGTTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAGCAATACCCCAGTCCCTGGTACTAATGTCTGTCTTAGTTAGGGCTTTACTGATTAACTCACGACACTaGAACTCAGGTAGAGTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: TAIPQSLVLMSVLVRALLINSRH*NSGRVL Trigger: GAGAACTCTACCTGAGTTCAAGTGTCGTGAGTTAAT...CAGTAAAGCCCTAACTAAGACAGACATTAGTACCAGGGACTGGGGTATTGCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAGCAATACCCCAGTCCCTGGTACTAATGTCTGTCTTAGTTAGGGCTTTACTGGACTGTTCTTCTTTCTaGTTGGTTGTCCTTGAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: TAIPQSLVLMSVLVRALLDCSSF*LVVLEA Trigger: TGCTTCAAGGACAACCAACAAGAAAGAAGAACAGTC...CAGTAAAGCCCTAACTAAGACAGACATTAGTACCAGGGACTGGGGTATTGCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
||
| 3UTR TCA 72 bp | CAGGACCACCAAAAAGACACCATATACCAGCTGATATaGGTTACCAACACACATACAGTAGAGGACTTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: QDHQKDTIYQLI*VTNTHTVEDFQ Trigger: CTGGAAGTCCTCTACTGTATGTGTGTTGGTAACTCATATCAGCTGGTATATGGTGTCTTTTTGGTGGTCCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
||
| 3UTR TCA 72 bp | ACAGTGACATCTATCTTGCCAATTTCAGGGCTTCTGTaGCCTTTTACATTCTGTCAGGATCTTTCAGGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: TVTSILPISGLL*PFTFCQDLSGP Trigger: TGGCCCTGAAAGATCCTGACAGAATGTAAAAGGTCACAGAAGCCCTGAAATTGGCAAGATAGATGTCACTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
||
| 3UTR GCA 72 bp | CTCCTATTTTCTGAACTTGTCTGTATACATTATTTCTaGTGGCCCTCAGGGCTTCTTACTGTGGCTATCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LLFSELVCIHYF*WPSGLLTVAIR Trigger: CCTGATAGCCACAGTAAGAAGCCCTGAGGGCCAGCAGAAATAATGTATACAGACAAGTTCAGAAAATAGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
||
| 3UTR GCA 72 bp | CACACCAACACACCTAGTCCGGCTTTCTGCTCCATATaGAACTATATTGGACTAACCGATTCCCAAATGTTT | + |
|
Preference number: 3 (lower is better) Translates to: HTNTPSPAFCSI*NYIGLTDSQMF Trigger: AAACATTTGGGAATCGGTTAGTCCAATATAGTTGCATATGGAGCAGAAAGCCGGACTAGGTGTGTTGGTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
||
| 3UTR TCA 72 bp | TATGTTTCAGTAGATGATCTGCCTTCCGAGTTCCTCTaGCAAGAGAATGATCAGCACCTCATCCTAAAACAG | + |
|
Preference number: 3 (lower is better) Translates to: YVSVDDLPSEFL*QENDQHLILKQ Trigger: CTGTTTTAGGATGAGGTGCTGATCATTCTCTTGTCAGAGGAACTCGGAAGGCAGATCATCTACTGAAACATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
||
| 3UTR GCA 72 bp | TCACACCTATTCCAAAAAGGCCACACCTCAAAATGGTaGCACTCCTTTGTCCAAGAATATACAAACCATCAC | + |
|
Preference number: 3 (lower is better) Translates to: SHLFQKGHTSKW*HSFVQEYTNHH Trigger: GTGATGGTTTGTATATTCTTGGACAAAGGAGTGGCACCATTTTGAGGTGTGGCCTTTTTGGAATAGGTGTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
||
| 3UTR CCA 72 bp | CTATTTTCTGAACTTGTCTGTATACATTATTTCTGCTaGCCCTCAGGGCTTCTTACTGTGGCTATCAGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: LFSELVCIHYFC*PSGLLTVAIRN Trigger: GTTCCTGATAGCCACAGTAAGAAGCCCTGAGGGCCAGCAGAAATAATGTATACAGACAAGTTCAGAAAATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
||
| 3UTR CCA 72 bp | AGGTCACACCTATTCCAAAAAGGCCACACCTCAAAATaGTGCCACTCCTTTGTCCAAGAATATACAAACCAT | + |
|
Preference number: 3 (lower is better) Translates to: RSHLFQKGHTSK*CHSFVQEYTNH Trigger: ATGGTTTGTATATTCTTGGACAAAGGAGTGGCACCATTTTGAGGTGTGGCCTTTTTGGAATAGGTGTGACCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
||
| 3UTR-3UTR CAA 90 bp | GGCTTTACTGCTGTGAACAGACACCATGACCAAGGCAAGTCTTATAAAACAAAATTCTGCTCAAAAGGGTaGGCTAATACCCAGGGATTA | + |
|
Preference number: 3 (lower is better) Translates to: GFTAVNRHHDQGKSYKTKFCSKG*ANTQGL Trigger: TAATCCCTGGGTATTAGCCAACCCTTTTGAGCAGAA...TTTTGTTTTATAAGACTTGCCTTGGTCATGGTGTCTGTTCACAGCAGTAAAGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGTTGCTGGAGAGATTTTCTGACTCTTTCTCAGCAACCAATATCACAAACACCAATGGTGCCACTCCTTaGTCCAAGAATATACAAACC | + |
|
Preference number: 3 (lower is better) Translates to: WLLERFSDSFSATNITNTNGATP*SKNIQT Trigger: GGTTTGTATATTCTTGGACAAAGGAGTGGCACCATT...GGTGTTTGTGATATTGGTTGCTGAGAAAGAGTCAGAAAATCTCTCCAGCAACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
||
| 3UTR TCA 72 bp | TTGTTTAATGGCTTTAAAACCTCTTGGAAGGTGCTCTaGGTCATAGATGCCTACTTGCTATCTCAGGAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: LFNGFKTSWKVL*VIDAYLLSQEQ Trigger: TTGCTCCTGAGATAGCAAGTAGGCATCTATGACTCAGAGCACCTTCCAAGAGGTTTTAAAGCCATTAAACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
||
| 3UTR CCA 72 bp | TGGATAATTTTAATTGTAGTAGCTGCAAAGCAGGGATaGACAATAGGGAATCTGAGACTACAGAGCTACTTC | + |
|
Preference number: 3 (lower is better) Translates to: WIILIVVAAKQG*TIGNLRLQSYF Trigger: GAAGTAGCTCTGTAGTCTCAGATTCCCTATTGTCCATCCCTGCTTTGCAGCTACTACAATTAAAATTATCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
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| 3UTR GCA 72 bp | AATCTGAGACTACAGAGCTACTTCACTATAATGAAATaGTGTTCCAAACAGGAAAACAAAGACAACAAGAGG | + |
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Preference number: 3 (lower is better) Translates to: NLRLQSYFTIMK*CSKQENKDNKR Trigger: CCTCTTGTTGTCTTTGTTTTCCTGTTTGGAACAGCATTTCATTATAGTGAAGTAGCTCTGTAGTCTCAGATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
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| 3UTR GCA 72 bp | ATGTGTATAGTGATGGATAATTTTAATTGTAGTAGCTaGAAAGCAGGGATGGACAATAGGGAATCTGAGACT | + |
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Preference number: 3 (lower is better) Translates to: MCIVMDNFNCSS*KAGMDNRESET Trigger: AGTCTCAGATTCCCTATTGTCCATCCCTGCTTTGCAGCTACTACAATTAAAATTATCCATCACTATACACAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
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| 3UTR TCA 72 bp | TTCCACATCCAACAAACCAGTAGTCACATGTTTCACTaGAGAACCAAGATTGAAAAATATTATCAAACTGGC | + |
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Preference number: 3 (lower is better) Translates to: FHIQQTSSHMFH*RTKIEKYYQTG Trigger: GCCAGTTTGATAATATTTTTCAATCTTGGTTCTTCAGTGAAACATGTGACTACTGGTTTGTTGGATGTGGAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
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| 3UTR CAA 72 bp | CCCCTTGAGGATCTGGTTCCCACTTTGGGCCTGTCATaGGACCTTCTTTTCCTCGGGTTCCTCTCCACTTCT | + |
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Preference number: 4 (lower is better) Translates to: PLEDLVPTLGLS*DLLFLGFLSTS Trigger: AGAAGTGGAGAGGAACCCGAGGAAAAGAAGGTCCAATGACAGGCCCAAAGTGGGAACCAGATCCTCAAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
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| 3UTR CAA 72 bp | TGCAGGTGTAGCAACTCCAGATTGGCCGGGCTGTGGTaGCTGGAGAGATTTTCTGACTCTTTCTCAGCAACC | + |
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Preference number: 4 (lower is better) Translates to: CRCSNSRLAGLW*LERFSDSFSAT Trigger: GGTTGCTGAGAAAGAGTCAGAAAATCTCTCCAGCAACCACAGCCCGGCCAATCTGGAGTTGCTACACCTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
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| CDS-3UTR GCA 90 bp | ATCCCACGCAGGGGTAGAGGAGTCTACCACAAGGGGAAAGAGGTCCCAGTTTTTTGTAGAGGAGGGGGTTaGATACTGCCACAAATCTGT | + |
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Preference number: 4 (lower is better) Translates to: IPRRGRGVYHKGKEVPVFCRGGG*ILPQIC Trigger: ACAGATTTGTGGCAGTATGCAACCCCCTCCTCTACA...AAAAACTGGGACCTCTTTCCCCTTGTGGTAGACTCCTCTACCCCTGCGTGGGAT 51% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
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| 3UTR CAA 72 bp | TGGGCACACACATGGGTTCAAGGAATGGTCAAAACATaGACAGACACACAGGTTCAAGGAGTGGCCAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: WAHTWVQGMVKT*TDTQVQGVARA Trigger: TGCTCTGGCCACTCCTTGAACCTGTGTGTCTGTCAATGTTTTGACCATTCCTTGAACCCATGTGTGTGCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
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| CDS-3UTR GCA 90 bp | ATCCCACGCAGGGGTAGAGGAGTCTACCACAAGGGGAAAGAGGTCCCAGTTTTTCATGCAAAGAAGAATTaGATGACACAGCCTGTGAAG | + |
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Preference number: 4 (lower is better) Translates to: IPRRGRGVYHKGKEVPVFHAKKN*MTQPVK Trigger: CTTCACAGGCTGTGTCATGCAATTCTTCTTTGCATG...AAAAACTGGGACCTCTTTCCCCTTGTGGTAGACTCCTCTACCCCTGCGTGGGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
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| CDS-3UTR GCA 90 bp | CCTATCACAGCAATACCCCAGTCCCTGGTACTAATGTCTGTCTTAGTTAGGGCTGAGGGGGTTGCATACTaGCACAAATCTGTCATAGGC | + |
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Preference number: 4 (lower is better) Translates to: PITAIPQSLVLMSVLVRAEGVAY*HKSVIG Trigger: GCCTATGACAGATTTGTGGCAGTATGCAACCCCCTC...AGCCCTAACTAAGACAGACATTAGTACCAGGGACTGGGGTATTGCTGTGATAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
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| 3UTR CAA 72 bp | CCAGTGTTGACTGTTCTTCTTTCTTGTTGGTTGTCCTaGAAGCAGTGGAGGGGTAAGAGGTTTCATGGGGCT | + |
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Preference number: 4 (lower is better) Translates to: PVLTVLLSCWLS*KQWRGKRFHGA Trigger: AGCCCCATGAAACCTCTTACCCCTCCACTGCTTCAAGGACAACCAACAAGAAAGAAGAACAGTCAACACTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
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| CDS-3UTR TCA 90 bp | GGCTTTACTGCTGTGAACAGACACCATGACCAAGGCAAGTCTTATAAAACAAAAGGTTCCCCAGCGCAGTaGCTGTGTATATGGTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: GFTAVNRHHDQGKSYKTKGSPAQ*LCIWSG Trigger: TCCTGACCATATACACAGTCACTGCGCTGGGGAACC...TTTTGTTTTATAAGACTTGCCTTGGTCATGGTGTCTGTTCACAGCAGTAAAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
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| CDS-3UTR TCA 90 bp | CCTATCACAGCAATACCCCAGTCCCTGGTACTAATGTCTGTCTTAGTTAGGGCTAGACTGAAGCCACCTTaGCCAAAAGCCAAGAACTTT | + |
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Preference number: 4 (lower is better) Translates to: PITAIPQSLVLMSVLVRARLKPP*PKAKNF Trigger: AAAGTTCTTGGCTTTTGGTCAAGGTGGCTTCAGTCT...AGCCCTAACTAAGACAGACATTAGTACCAGGGACTGGGGTATTGCTGTGATAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
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| 3UTR CAA 72 bp | ATTCAACAAGCAGCTGAAAGAGTCAGATGCAGATATTaGCACCCAACCAGTGGACAGAAGCAACAGACTGCT | + |
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Preference number: 4 (lower is better) Translates to: IQQAAERVRCRY*HPTSGQKQQTA Trigger: AGCAGTCTGTTGCTTCTGTCCACTGGTTGGGTGCAAATATCTGCATCTGACTCTTTCAGCTGCTTGTTGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
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| 3UTR CAA 72 bp | TCCAAAAAGGCCACACCTCAAAATGGTGCCACTCCTTaGTCCAAGAATATACAAACCATCACACCAACACAC | + |
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Preference number: 4 (lower is better) Translates to: SKKATPQNGATP*SKNIQTITPTH Trigger: GTGTGTTGGTGTGATGGTTTGTATATTCTTGGACAAAGGAGTGGCACCATTTTGAGGTGTGGCCTTTTTGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
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| CDS-3UTR CCA 90 bp | GGTCCCCCAACCTCCTATTTTCTGAACTTGTCTGTATACATTATTTCTGCTGGCCAGATGATAATGCTATaGAAAATAGTGATGGTAGTG | + |
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Preference number: 4 (lower is better) Translates to: GPPTSYFLNLSVYIISAGQMIML*KIVMVV Trigger: CACTACCATCACTATTTTCCATAGCATTATCATCTG...GCCAGCAGAAATAATGTATACAGACAAGTTCAGAAAATAGGAGGTTGGGGGACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
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| CDS-3UTR GCA 90 bp | TTGATTGTTCTGTATAATTCTGCTCAAAAGGGTTGGCTAATACCCAGGGATTACCTGTCACCACAAATATaGATGCAAAGAAGAATTGCA | + |
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Preference number: 4 (lower is better) Translates to: LIVLYNSAQKGWLIPRDYLSPQI*MQRRIA Trigger: TGCAATTCTTCTTTGCATGCATATTTGTGGTGACAG...GTAATCCCTGGGTATTAGCCAACCCTTTTGAGCAGAATTATACAGAACAATCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
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| CDS-3UTR CAA 90 bp | GGCTTTACTGCTGTGAACAGACACCATGACCAAGGCAAGTCTTATAAAACAAAAAAGACTGAAGCCACCTaGACCAAAAGCCAAGAACTT | + |
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Preference number: 5 (lower is better) Translates to: GFTAVNRHHDQGKSYKTKKTEAT*TKSQEL Trigger: AAGTTCTTGGCTTTTGGTCAAGGTGGCTTCAGTCTT...TTTTGTTTTATAAGACTTGCCTTGGTCATGGTGTCTGTTCACAGCAGTAAAGCC 42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000214207.2 |
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