RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OLFR1167 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000100899

Ensembl transcript IDs: ENSMUST00000099832.5, ENSMUST00000216951.2

Found 71 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCTGATTTCCAGAGTGGTTGTACACGCTTGCAATCCCACCAGCAATaGAGGAGTGTTCCTCTTTCTCCACATCCTCGCCAGCATCTGCTG +
Preference number: 1 (lower is better)
Translates to: ADFQSGCTRLQSHQQ*RSVPLSPHPRQHLL
Trigger: CAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGCTGGTGGGATTGCAAGCGTGTACAACCACTCTGGAAATCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216951.2
3UTR CCA 90 bp GTTTGGTGGCTGATTATGGGATGGACCCCCTGGTGGAGCAGTCTCTaGATGGTCCATCCTTTCGTCTTAGCTCCAAACTTTGTCTCTGTA +
Preference number: 1 (lower is better)
Translates to: VWWLIMGWTPWWSSL*MVHPFVLAPNFVSV
Trigger: TACAGAGACAAAGTTTGGAGCTAAGACGAAAGGATGGACCATCCAGAGACTGCTCCACCAGGGGGTCCATCCCATAATCAGCCACCAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000216951.2
3UTR CCA 90 bp TCCCTTCAGCAAAATCTTGCTGTCATATGTAATAGTGTCTGGGTTTaGTGGCTGATTATGGGATGGACCCCCTGGTGGAGCAGTCTCTGG +
Preference number: 1 (lower is better)
Translates to: SLQQNLAVICNSVWV*WLIMGWTPWWSSLW
Trigger: CCAGAGACTGCTCCACCAGGGGGTCCATCCCATAATCAGCCACCAAACCCAGACACTATTACATATGACAGCAAGATTTTGCTGAAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000216951.2
3UTR CCA 90 bp TCAGGCTCCCTTCAGCAAAATCTTGCTGTCATATGTAATAGTGTCTaGGTTTGGTGGCTGATTATGGGATGGACCCCCTGGTGGAGCAGT +
Preference number: 1 (lower is better)
Translates to: SGSLQQNLAVICNSV*VWWLIMGWTPWWSS
Trigger: ACTGCTCCACCAGGGGGTCCATCCCATAATCAGCCACCAAACCCAGACACTATTACATATGACAGCAAGATTTTGCTGAAGGGAGCCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000216951.2
3UTR TCA 90 bp GAGTGTTCCTCTTTCTCCACATCCTCGCCAGCATCTGCTGTCACCTaGATTTTTGATCTTAGCCATTCTGACTGGTGTGAGGTGGAATCT +
Preference number: 1 (lower is better)
Translates to: ECSSFSTSSPASAVT*IFDLSHSDWCEVES
Trigger: AGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000216951.2
3UTR GCA 90 bp AGTCAATCACCCCCTCTCAACTCTCTTTGCCTCTCACAATGTTTCTaGTTCAGTGTGGGCCTCTTCCTGTGTCTACATAAAAACACACAC +
Preference number: 1 (lower is better)
Translates to: SQSPPLNSLCLSQCF*FSVGLFLCLHKNTH
Trigger: GTGTGTGTTTTTATGTAGACACAGGAAGAGGCCCACACTGAAGCAGAAACATTGTGAGAGGCAAAGAGAGTTGAGAGGGGGTGATTGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000216951.2
3UTR GCA 90 bp AACTTAGAAAATTACCACAGTCAATCACCCCCTCTCAACTCTCTTTaGCTCTCACAATGTTTCTGCTTCAGTGTGGGCCTCTTCCTGTGT +
Preference number: 1 (lower is better)
Translates to: NLENYHSQSPPLNSL*LSQCFCFSVGLFLC
Trigger: ACACAGGAAGAGGCCCACACTGAAGCAGAAACATTGTGAGAGGCAAAGAGAGTTGAGAGGGGGTGATTGACTGTGGTAATTTTCTAAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000216951.2
3UTR GCA 90 bp ATTGCTGGATCTTTCAGTAGTACTATTTCCAATTTTCTGAGGAACTaGCAGGCTGATTTCCAGAGTGGTTGTACACGCTTGCAATCCCAC +
Preference number: 1 (lower is better)
Translates to: IAGSFSSTISNFLRN*QADFQSGCTRLQSH
Trigger: GTGGGATTGCAAGCGTGTACAACCACTCTGGAAATCAGCCTGGCAGTTCCTCAGAAAATTGGAAATAGTACTACTGAAAGATCCAGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216951.2
3UTR GCA 90 bp TGGAGCATGTGTCCTTATTACCAGTTGAAACATCTTCTGGGTATATaGCCCAGGAGAGGTATTGCTGGATCTTTCAGTAGTACTATTTCC +
Preference number: 1 (lower is better)
Translates to: WSMCPYYQLKHLLGI*PRRGIAGSFSSTIS
Trigger: GGAAATAGTACTACTGAAAGATCCAGCAATACCTCTCCTGGGGCATATACCCAGAAGATGTTTCAACTGGTAATAAGGACACATGCTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216951.2
3UTR-3UTR CCA 90 bp CCCCTACCCACCAACTCCCACTTGGCCCTGGTGTTCCCCTGTACTGGCACATATCTGCTTCGTTTATTTTaGGACCCAAATGAAGGCCTA +
Preference number: 2 (lower is better)
Translates to: PLPTNSHLALVFPCTGTYLLRLF*DPNEGL
Trigger: TAGGCCTTCATTTGGGTCCCAAAATAAACGAAGCAG...ATATGTGCCAGTACAGGGGAACACCAGGGCCAAGTGGGAGTTGGTGGGTAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000216951.2
3UTR-3UTR CCA 90 bp AGCAGCCAACTGCTTTTCCAAAGGTCCGGAGTTCAAATCCCAGCAACCACATGGGTTTCTGCTTCAGTGTaGGCCTCTTCCTGTGTCTAC +
Preference number: 2 (lower is better)
Translates to: SSQLLFQRSGVQIPATTWVSASV*ASSCVY
Trigger: GTAGACACAGGAAGAGGCCCACACTGAAGCAGAAAC...CCATGTGGTTGCTGGGATTTGAACTCCGGACCTTTGGAAAAGCAGTTGGCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216951.2
3UTR-3UTR GCA 90 bp CTAGGTCTAGCCCAGGTATGTTCTTTTGTTGGAGTTTCAGCCTCTGTGAGAACCCTCTCACAATGTTTCTaGTTCAGTGTGGGCCTCTTC +
Preference number: 2 (lower is better)
Translates to: LGLAQVCSFVGVSASVRTLSQCF*FSVGLF
Trigger: GAAGAGGCCCACACTGAAGCAGAAACATTGTGAGAG...GGTTCTCACAGAGGCTGAAACTCCAACAAAAGAACATACCTGGGCTAGACCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216951.2
3UTR CAA 90 bp GAACTTAGAAAATTACCACAGTCAATCACCCCCTCTCAACTCTCTTaGCCTCTCACAATGTTTCTGCTTCAGTGTGGGCCTCTTCCTGTG +
Preference number: 2 (lower is better)
Translates to: ELRKLPQSITPSQLS*PLTMFLLQCGPLPV
Trigger: CACAGGAAGAGGCCCACACTGAAGCAGAAACATTGTGAGAGGCAAAGAGAGTTGAGAGGGGGTGATTGACTGTGGTAATTTTCTAAGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000216951.2
3UTR CAA 90 bp CCTCTTTCTCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTaGATCTTAGCCATTCTGACTGGTGTGAGGTGGAATCTTGTTTTG +
Preference number: 2 (lower is better)
Translates to: PLSPHPRQHLLSPEF*ILAILTGVRWNLVL
Trigger: CAAAACAAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216951.2
3UTR-3UTR CCA 90 bp GACTGTACCCTTTTTCTCCCACTAATGCCAAGCAAGGAATCCAAGTTTGGAGACAGTTTCTATCCTCTTTaGGGGGCCACTTTAACCCCT +
Preference number: 2 (lower is better)
Translates to: DCTLFLPLMPSKESKFGDSFYPL*GATLTP
Trigger: AGGGGTTAAAGTGGCCCCCCAAAGAGGATAGAAACT...GTCTCCAAACTTGGATTCCTTGCTTGGCATTAGTGGGAGAAAAAGGGTACAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000216951.2
3UTR CAA 90 bp CTTGTGTTCCGTCTTATAGATGACTGTGAGCATCCACCTCTGTATTaGCTATGCAATGGCATAGCCTCACACAAGACAGCTATATCAGGC +
Preference number: 2 (lower is better)
Translates to: LVFRLIDDCEHPPLY*LCNGIASHKTAISG
Trigger: GCCTGATATAGCTGTCTTGTGTGAGGCTATGCCATTGCATAGCAAATACAGAGGTGGATGCTCACAGTCATCTATAAGACGGAACACAAG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216951.2
3UTR CAA 90 bp CTCTGGGGGTACTGGTTAGTTCTTATTGTTGTTCTACCTATAGGGTaGCAGACTCCTTCAGCAACTTGGGTACTTTCTCTAGCTCTTCCA +
Preference number: 2 (lower is better)
Translates to: LWGYWLVLIVVLPIG*QTPSATWVLSLALP
Trigger: TGGAAGAGCTAGAGAAAGTACCCAAGTTGCTGAAGGAGTCTGCAACCCTATAGGTAGAACAACAATAAGAACTAACCAGTACCCCCAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000216951.2
3UTR-3UTR GCA 90 bp GCAAGACTGTACCCTTTTTCTCCCACTAATGCCAAGCAAGGAATCCAAGTTTGGCCTCTCAACTCTCTTTaGCTCTCACAATGTTTCTGC +
Preference number: 2 (lower is better)
Translates to: ARLYPFSPTNAKQGIQVWPLNSL*LSQCFC
Trigger: GCAGAAACATTGTGAGAGGCAAAGAGAGTTGAGAGG...CCAAACTTGGATTCCTTGCTTGGCATTAGTGGGAGAAAAAGGGTACAGTCTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000216951.2
3UTR-3UTR CCA 90 bp CGTTTATTTTGGGACCCAAATGAAGGCCTAGATGTACAACTTCCACATACTATCAAAACAACCAAGAAGTaGGAGTGGGTGGGTGGGGGA +
Preference number: 2 (lower is better)
Translates to: RLFWDPNEGLDVQLPHTIKTTKK*EWVGGG
Trigger: TCCCCCACCCACCCACTCCCACTTCTTGGTTGTTTT...GATAGTATGTGGAAGTTGTACATCTAGGCCTTCATTTGGGTCCCAAAATAAACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000216951.2
3UTR-3UTR TCA 90 bp AGCAGTCTCTGGATGGTCCATCCTTTCGTCTTAGCTCCAAACTTTGTCTCTGTACTATTTCCAATTTTCTaGGGAACTGCCAGGCTGATT +
Preference number: 2 (lower is better)
Translates to: SSLWMVHPFVLAPNFVSVLFPIF*GTARLI
Trigger: AATCAGCCTGGCAGTTCCTCAGAAAATTGGAAATAG...TACAGAGACAAAGTTTGGAGCTAAGACGAAAGGATGGACCATCCAGAGACTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216951.2
3UTR-3UTR TCA 90 bp GCTGCTATGAACATAGTGGAGCATGTGTCCTTATTACCAGTTGAAACATCTTCTAATCACATTACATCCTaGTCTCTCTCCCACCTCCAG +
Preference number: 2 (lower is better)
Translates to: AAMNIVEHVSLLPVETSSNHITS*SLSHLQ
Trigger: CTGGAGGTGGGAGAGAGATCAGGATGTAATGTGATT...AGAAGATGTTTCAACTGGTAATAAGGACACATGCTCCACTATGTTCATAGCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216951.2
3UTR-3UTR CCA 90 bp GCAAGACTGTACCCTTTTTCTCCCACTAATGCCAAGCAAGGAATCCAAGTTTGGATGTTGGTGTTCTTGTaGAGTTTCTATCCTCTTTGG +
Preference number: 2 (lower is better)
Translates to: ARLYPFSPTNAKQGIQVWMLVFL*SFYPLW
Trigger: CCAAAGAGGATAGAAACTCCACAAGAACACCAACAT...CCAAACTTGGATTCCTTGCTTGGCATTAGTGGGAGAAAAAGGGTACAGTCTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000216951.2
3UTR-3UTR TCA 90 bp AGCAGTCTCTGGATGGTCCATCCTTTCGTCTTAGCTCCAAACTTTGTCTCTGTAGGTGGAATCTTGTTTTaGTTTGCATTCCCTGATAAT +
Preference number: 2 (lower is better)
Translates to: SSLWMVHPFVLAPNFVSVGGILF*FAFPDN
Trigger: ATTATCAGGGAATGCAAATCAAAACAAGATTCCACC...TACAGAGACAAAGTTTGGAGCTAAGACGAAAGGATGGACCATCCAGAGACTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216951.2
3UTR-3UTR GCA 90 bp AATAAGGCTGCTATGAACATAGTGGAGCATGTGTCCTTATTACCAGTTGAAACATCTCAAATCCTCCTCTaGTTATCCTCTGAGAGAGTG +
Preference number: 2 (lower is better)
Translates to: NKAAMNIVEHVSLLPVETSQILL*LSSERV
Trigger: CACTCTCTCAGAGGATAAGCAGAGGAGGATTTGAGA...TGTTTCAACTGGTAATAAGGACACATGCTCCACTATGTTCATAGCAGCCTTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216951.2
3UTR-3UTR TCA 90 bp CGTTTATTTTGGGACCCAAATGAAGGCCTAGATGTACAACTTCCACATACTATCCACTGCAACAATTTGTaGCTTATGAACACAAGAGTA +
Preference number: 2 (lower is better)
Translates to: RLFWDPNEGLDVQLPHTIHCNNL*LMNTRV
Trigger: TACTCTTGTGTTCATAAGTCACAAATTGTTGCAGTG...GATAGTATGTGGAAGTTGTACATCTAGGCCTTCATTTGGGTCCCAAAATAAACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216951.2
3UTR CCA 72 bp GCCCTGTTCCCCTACCCACCAACTCCCACTTGGCCCTaGTGTTCCCCTGTACTGGCACATATAAAGTTTGCA +
Preference number: 3 (lower is better)
Translates to: ALFPYPPTPTWP*CSPVLAHIKFA
Trigger: TGCAAACTTTATATGTGCCAGTACAGGGGAACACCAGGGCCAAGTGGGAGTTGGTGGGTAGGGGAACAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216951.2
3UTR CCA 72 bp CAGAGTGGTTGTACACGCTTGCAATCCCACCAGCAATaGAGGAGTGTTCCTCTTTCTCCACATCCTCGCCAG +
Preference number: 3 (lower is better)
Translates to: QSGCTRLQSHQQ*RSVPLSPHPRQ
Trigger: CTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGCTGGTGGGATTGCAAGCGTGTACAACCACTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216951.2
3UTR GCA 72 bp GCTGTTGAGATGGCTCAGTGGGTAAGAGCAGCCAACTaGTTTTCCAAAGGTCCGGAGTTCAAATCCCAGCAA +
Preference number: 3 (lower is better)
Translates to: AVEMAQWVRAAN*FSKGPEFKSQQ
Trigger: TTGCTGGGATTTGAACTCCGGACCTTTGGAAAAGCAGTTGGCTGCTCTTACCCACTGAGCCATCTCAACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216951.2
3UTR GCA 72 bp ACTGCCAGGCTGATTTCCAGAGTGGTTGTACACGCTTaGAATCCCACCAGCAATGGAGGAGTGTTCCTCTTT +
Preference number: 3 (lower is better)
Translates to: TARLISRVVVHA*NPTSNGGVFLF
Trigger: AAAGAGGAACACTCCTCCATTGCTGGTGGGATTGCAAGCGTGTACAACCACTCTGGAAATCAGCCTGGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216951.2
3UTR CCA 72 bp AAGGGGCCTAGGTCTAGCCCAGGTATGTTCTTTTGTTaGAGTTTCAGCCTCTGTGAGAACCCAAGGGTCCAA +
Preference number: 3 (lower is better)
Translates to: KGPRSSPGMFFC*SFSLCENPRVQ
Trigger: TTGGACCCTTGGGTTCTCACAGAGGCTGAAACTCCAACAAAAGAACATACCTGGGCTAGACCTAGGCCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216951.2
3UTR CCA 72 bp TCTCTCAAATCCTCCTCTGCTTATCCTCTGAGAGAGTaGAAATCAGCAGTCCCAGGTGTCTCCCATCTGAGC +
Preference number: 3 (lower is better)
Translates to: SLKSSSAYPLRE*KSAVPGVSHLS
Trigger: GCTCAGATGGGAGACACCTGGGACTGCTGATTTCCACTCTCTCAGAGGATAAGCAGAGGAGGATTTGAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216951.2
3UTR CCA 72 bp CTGATTATGGGATGGACCCCCTGGTGGAGCAGTCTCTaGATGGTCCATCCTTTCGTCTTAGCTCCAAACTTT +
Preference number: 3 (lower is better)
Translates to: LIMGWTPWWSSL*MVHPFVLAPNF
Trigger: AAAGTTTGGAGCTAAGACGAAAGGATGGACCATCCAGAGACTGCTCCACCAGGGGGTCCATCCCATAATCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000216951.2
3UTR TCA 72 bp AAATCAGCAGTCCCAGGTGTCTCCCATCTGAGCTCATaGAATCGCTGCAAGACTGTACCCTTTTTCTCCCAC +
Preference number: 3 (lower is better)
Translates to: KSAVPGVSHLSS*NRCKTVPFFSH
Trigger: GTGGGAGAAAAAGGGTACAGTCTTGCAGCGATTTCATGAGCTCAGATGGGAGACACCTGGGACTGCTGATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000216951.2
3UTR TCA 72 bp GAGAGTGGAAATCAGCAGTCCCAGGTGTCTCCCATCTaGGCTCATGAAATCGCTGCAAGACTGTACCCTTTT +
Preference number: 3 (lower is better)
Translates to: ESGNQQSQVSPI*AHEIAARLYPF
Trigger: AAAAGGGTACAGTCTTGCAGCGATTTCATGAGCTCAGATGGGAGACACCTGGGACTGCTGATTTCCACTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216951.2
3UTR TCA 72 bp TTGCTGTCATATGTAATAGTGTCTGGGTTTGGTGGCTaGTTATGGGATGGACCCCCTGGTGGAGCAGTCTCT +
Preference number: 3 (lower is better)
Translates to: LLSYVIVSGFGG*LWDGPPGGAVS
Trigger: AGAGACTGCTCCACCAGGGGGTCCATCCCATAATCAGCCACCAAACCCAGACACTATTACATATGACAGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000216951.2
3UTR TCA 72 bp ACAATTCTTCTCTCAAATCCTCCTCTGCTTATCCTCTaGGAGAGTGGAAATCAGCAGTCCCAGGTGTCTCCC +
Preference number: 3 (lower is better)
Translates to: TILLSNPPLLIL*ESGNQQSQVSP
Trigger: GGGAGACACCTGGGACTGCTGATTTCCACTCTCTCAGAGGATAAGCAGAGGAGGATTTGAGAGAAGAATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216951.2
3UTR GCA 72 bp CCCCCTCTCAACTCTCTTTGCCTCTCACAATGTTTCTaGTTCAGTGTGGGCCTCTTCCTGTGTCTACATAAA +
Preference number: 3 (lower is better)
Translates to: PPLNSLCLSQCF*FSVGLFLCLHK
Trigger: TTTATGTAGACACAGGAAGAGGCCCACACTGAAGCAGAAACATTGTGAGAGGCAAAGAGAGTTGAGAGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000216951.2
3UTR CCA 72 bp CAAAATCTTGCTGTCATATGTAATAGTGTCTGGGTTTaGTGGCTGATTATGGGATGGACCCCCTGGTGGAGC +
Preference number: 3 (lower is better)
Translates to: QNLAVICNSVWV*WLIMGWTPWWS
Trigger: GCTCCACCAGGGGGTCCATCCCATAATCAGCCACCAAACCCAGACACTATTACATATGACAGCAAGATTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000216951.2
3UTR TCA 72 bp TCTTTCTCCACATCCTCGCCAGCATCTGCTGTCACCTaGATTTTTGATCTTAGCCATTCTGACTGGTGTGAG +
Preference number: 3 (lower is better)
Translates to: SFSTSSPASAVT*IFDLSHSDWCE
Trigger: CTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000216951.2
3UTR CCA 72 bp CTTCAGCAAAATCTTGCTGTCATATGTAATAGTGTCTaGGTTTGGTGGCTGATTATGGGATGGACCCCCTGG +
Preference number: 3 (lower is better)
Translates to: LQQNLAVICNSV*VWWLIMGWTPW
Trigger: CCAGGGGGTCCATCCCATAATCAGCCACCAAACCCAGACACTATTACATATGACAGCAAGATTTTGCTGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000216951.2
3UTR TCA 72 bp GTAGATGTGCCACATTTTCTGTATCCATTCCTCTGTTaGGGGGCATCTAGGTTCTTTCCAGCATCTGGCTAT +
Preference number: 3 (lower is better)
Translates to: VDVPHFLYPFLC*GASRFFPASGY
Trigger: ATAGCCAGATGCTGGAAAGAACCTAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGCACATCTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000216951.2
3UTR-3UTR CAA 90 bp AGTAGTACTCCATTGGGTAGATGTGCCACATTTTCTGTATCCATTCCTCTGTTGCCCAGGTATGTTCTTTaGTTGGAGTTTCAGCCTCTG +
Preference number: 3 (lower is better)
Translates to: SSTPLGRCATFSVSIPLLPRYVL*LEFQPL
Trigger: CAGAGGCTGAAACTCCAACAAAAGAACATACCTGGG...CAACAGAGGAATGGATACAGAAAATGTGGCACATCTACCCAATGGAGTACTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216951.2
3UTR TCA 72 bp TTCAGCCTCTGTGAGAACCCAAGGGTCCAAGTTAGTTaGTTATGTTGGTGTTCTTGTGGAGTTTCTATCCTC +
Preference number: 3 (lower is better)
Translates to: FSLCENPRVQVS*LCWCSCGVSIL
Trigger: GAGGATAGAAACTCCACAAGAACACCAACATAATCAACTAACTTGGACCCTTGGGTTCTCACAGAGGCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216951.2
3UTR CCA 72 bp ACTCTCTTTGCCTCTCACAATGTTTCTGCTTCAGTGTaGGCCTCTTCCTGTGTCTACATAAAAACACACACA +
Preference number: 3 (lower is better)
Translates to: TLFASHNVSASV*ASSCVYIKTHT
Trigger: TGTGTGTGTTTTTATGTAGACACAGGAAGAGGCCCACACTGAAGCAGAAACATTGTGAGAGGCAAAGAGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000216951.2
3UTR TCA 72 bp TATGAACATAGTGGAGCATGTGTCCTTATTACCAGTTaGAACATCTTCTGGGTATATGCCCCAGGAGAGGTA +
Preference number: 3 (lower is better)
Translates to: YEHSGACVLITS*NIFWVYAPGEV
Trigger: TACCTCTCCTGGGGCATATACCCAGAAGATGTTTCAACTGGTAATAAGGACACATGCTCCACTATGTTCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216951.2
3UTR GCA 72 bp TGTCCTTATTACCAGTTGAAACATCTTCTGGGTATATaGCCCAGGAGAGGTATTGCTGGATCTTTCAGTAGT +
Preference number: 3 (lower is better)
Translates to: CPYYQLKHLLGI*PRRGIAGSFSS
Trigger: ACTACTGAAAGATCCAGCAATACCTCTCCTGGGGCATATACCCAGAAGATGTTTCAACTGGTAATAAGGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216951.2
3UTR TCA 72 bp TTTTTAAGATACTTAAGATACTGGAAAATGGGCTGTTaGGATGGCTCAGTGGGTAAGAGCAGCCAACTGCTT +
Preference number: 3 (lower is better)
Translates to: FLRYLRYWKMGC*DGSVGKSSQLL
Trigger: AAGCAGTTGGCTGCTCTTACCCACTGAGCCATCTCAACAGCCCATTTTCCAGTATCTTAAGTATCTTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000216951.2
3UTR TCA 72 bp TTGCTGGATCTTTCAGTAGTACTATTTCCAATTTTCTaGGGAACTGCCAGGCTGATTTCCAGAGTGGTTGTA +
Preference number: 3 (lower is better)
Translates to: LLDLSVVLFPIF*GTARLISRVVV
Trigger: TACAACCACTCTGGAAATCAGCCTGGCAGTTCCTCAGAAAATTGGAAATAGTACTACTGAAAGATCCAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216951.2
3UTR GCA 72 bp GAGATTACACATATAATCAACAACTTTAGGGATAGCTaGTGCTTCGTTTATTTTGGGACCCAAATGAAGGCC +
Preference number: 3 (lower is better)
Translates to: EITHIINNFRDS*CFVYFGTQMKA
Trigger: GGCCTTCATTTGGGTCCCAAAATAAACGAAGCAGCAGCTATCCCTAAAGTTGTTGATTATATGTGTAATCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216951.2
3UTR TCA 72 bp TCTCAACTGAGGAATAACGAATGGCTGAGAAGCCTCTaGATTGTACTTTCTGAATTAAATACTAAGTGCTTT +
Preference number: 3 (lower is better)
Translates to: SQLRNNEWLRSL*IVLSELNTKCF
Trigger: AAAGCACTTAGTATTTAATTCAGAAAGTACAATTCAGAGGCTTCTCAGCCATTCGTTATTCCTCAGTTGAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216951.2
3UTR TCA 72 bp CAATTTGTGACTTATGAACACAAGAGTATGTATTCCTaGGAGATAACTATTATCTGCATGTACCAACCTCAT +
Preference number: 3 (lower is better)
Translates to: QFVTYEHKSMYS*EITIICMYQPH
Trigger: ATGAGGTTGGTACATGCAGATAATAGTTATCTCTCAGGAATACATACTCTTGTGTTCATAAGTCACAAATTG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216951.2
3UTR CAA 72 bp AACTGCCAGGCTGATTTCCAGAGTGGTTGTACACGCTaGCAATCCCACCAGCAATGGAGGAGTGTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: NCQADFQSGCTR*QSHQQWRSVPL
Trigger: AAGAGGAACACTCCTCCATTGCTGGTGGGATTGCAAGCGTGTACAACCACTCTGGAAATCAGCCTGGCAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216951.2
3UTR CAA 72 bp CCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTaGATCTTAGCCATTCTGACTGGTGTGAGGTGGAAT +
Preference number: 4 (lower is better)
Translates to: PHPRQHLLSPEF*ILAILTGVRWN
Trigger: ATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGCAGATGCTGGCGAGGATGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216951.2
CDS-3UTR CCA 90 bp AGCAGCCAACTGCTTTTCCAAAGGTCCGGAGTTCAAATCCCAGCAACCACATGGGTGAGCTGTTTGAGTTaGGAATACAGTATAGGAGGA +
Preference number: 4 (lower is better)
Translates to: SSQLLFQRSGVQIPATTWVSCLS*EYSIGG
Trigger: TCCTCCTATACTGTATTCCCAACTCAAACAGCTCAC...CCATGTGGTTGCTGGGATTTGAACTCCGGACCTTTGGAAAAGCAGTTGGCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216951.2
3UTR CAA 72 bp AAATTACCACAGTCAATCACCCCCTCTCAACTCTCTTaGCCTCTCACAATGTTTCTGCTTCAGTGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: KLPQSITPSQLS*PLTMFLLQCGP
Trigger: AGGCCCACACTGAAGCAGAAACATTGTGAGAGGCAAAGAGAGTTGAGAGGGGGTGATTGACTGTGGTAATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000216951.2
CDS-3UTR CCA 90 bp CTAGGTCTAGCCCAGGTATGTTCTTTTGTTGGAGTTTCAGCCTCTGTGAGAACCACTAAGCATATCAACTaGCTAAAGGAGGAGTCAGAG +
Preference number: 4 (lower is better)
Translates to: LGLAQVCSFVGVSASVRTTKHIN*LKEESE
Trigger: CTCTGACTCCTCCTTTAGCCAGTTGATATGCTTAGT...GGTTCTCACAGAGGCTGAAACTCCAACAAAAGAACATACCTGGGCTAGACCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216951.2
3UTR CAA 72 bp CGTCTTATAGATGACTGTGAGCATCCACCTCTGTATTaGCTATGCAATGGCATAGCCTCACACAAGACAGCT +
Preference number: 4 (lower is better)
Translates to: RLIDDCEHPPLY*LCNGIASHKTA
Trigger: AGCTGTCTTGTGTGAGGCTATGCCATTGCATAGCAAATACAGAGGTGGATGCTCACAGTCATCTATAAGACG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216951.2
CDS-3UTR TCA 90 bp GTGTGGGCCTCTTCCTGTGTCTACATAAAAACACACACATATACACACATACACGTGAGAGTGAAGTTTTaGGCTGATAAGTCTCCTGAC +
Preference number: 4 (lower is better)
Translates to: VWASSCVYIKTHTYTHIHVRVKF*ADKSPD
Trigger: GTCAGGAGACTTATCAGCTCAAAACTTCACTCTCAC...GTGTATGTGTGTATATGTGTGTGTTTTTATGTAGACACAGGAAGAGGCCCACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000099832.5
ENSMUST00000216951.2
CDS-3UTR CCA 90 bp GTGGGCCTCTTCCTGTGTCTACATAAAAACACACACATATACACACATACACACGTGAGCTGTTTGAGTTaGGAATACAGTATAGGAGGA +
Preference number: 4 (lower is better)
Translates to: VGLFLCLHKNTHIYTHTHVSCLS*EYSIGG
Trigger: TCCTCCTATACTGTATTCCCAACTCAAACAGCTCAC...GTGTGTATGTGTGTATATGTGTGTGTTTTTATGTAGACACAGGAAGAGGCCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099832.5
ENSMUST00000216951.2
CDS-3UTR TCA 90 bp AGTGTGGGCCTCTTCCTGTGTCTACATAAAAACACACACATATACACACATACATCAACATGGGGATCATaGTTGTATAAAGAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: SVGLFLCLHKNTHIYTHTSTWGS*LYKEQW
Trigger: CCACTGCTCTTTATACAATCATGATCCCCATGTTGA...TGTATGTGTGTATATGTGTGTGTTTTTATGTAGACACAGGAAGAGGCCCACACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000099832.5
ENSMUST00000216951.2
CDS-3UTR CCA 90 bp TGGGCCTCTTCCTGTGTCTACATAAAAACACACACATATACACACATACACACAACTAAGCATATCAACTaGCTAAAGGAGGAGTCAGAG +
Preference number: 4 (lower is better)
Translates to: WASSCVYIKTHTYTHIHTTKHIN*LKEESE
Trigger: CTCTGACTCCTCCTTTAGCCAGTTGATATGCTTAGT...TGTGTGTATGTGTGTATATGTGTGTGTTTTTATGTAGACACAGGAAGAGGCCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099832.5
ENSMUST00000216951.2
CDS-3UTR CCA 90 bp GTGTGGGCCTCTTCCTGTGTCTACATAAAAACACACACATATACACACATACACCATGGAAAATTGTTATaGCAGTCAAGTGGGAAGTAC +
Preference number: 4 (lower is better)
Translates to: VWASSCVYIKTHTYTHIHHGKLL*QSSGKY
Trigger: GTACTTCCCACTTGACTGCCATAACAATTTTCCATG...GTGTATGTGTGTATATGTGTGTGTTTTTATGTAGACACAGGAAGAGGCCCACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000099832.5
ENSMUST00000216951.2
CDS-3UTR TCA 90 bp GTGTGGGCCTCTTCCTGTGTCTACATAAAAACACACACATATACACACATACACAAGTACATTGGAGTGTaGAGTTTGGGATTAACCTTT +
Preference number: 4 (lower is better)
Translates to: VWASSCVYIKTHTYTHIHKYIGV*SLGLTF
Trigger: AAAGGTTAATCCCAAACTTCACACTCCAATGTACTT...GTGTATGTGTGTATATGTGTGTGTTTTTATGTAGACACAGGAAGAGGCCCACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099832.5
ENSMUST00000216951.2
CDS-3UTR TCA 90 bp AATAAGGCTGCTATGAACATAGTGGAGCATGTGTCCTTATTACCAGTTGAAACATCAACATGGGGATCATaGTTGTATAAAGAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: NKAAMNIVEHVSLLPVETSTWGS*LYKEQW
Trigger: CCACTGCTCTTTATACAATCATGATCCCCATGTTGA...TGTTTCAACTGGTAATAAGGACACATGCTCCACTATGTTCATAGCAGCCTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216951.2
CDS-3UTR CCA 90 bp AGTGTGGGCCTCTTCCTGTGTCTACATAAAAACACACACATATACACACATACAAGGAGTAAGATCCCATaGAAAATTGTTATGGCAGTC +
Preference number: 4 (lower is better)
Translates to: SVGLFLCLHKNTHIYTHTRSKIP*KIVMAV
Trigger: GACTGCCATAACAATTTTCCATGGGATCTTACTCCT...TGTATGTGTGTATATGTGTGTGTTTTTATGTAGACACAGGAAGAGGCCCACACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000099832.5
ENSMUST00000216951.2
CDS-3UTR TCA 90 bp TGGGCCTCTTCCTGTGTCTACATAAAAACACACACATATACACACATACACACAAAGTACATTGGAGTGTaGAGTTTGGGATTAACCTTT +
Preference number: 4 (lower is better)
Translates to: WASSCVYIKTHTYTHIHTKYIGV*SLGLTF
Trigger: AAAGGTTAATCCCAAACTTCACACTCCAATGTACTT...TGTGTGTATGTGTGTATATGTGTGTGTTTTTATGTAGACACAGGAAGAGGCCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099832.5
ENSMUST00000216951.2
CDS-3UTR CCA 90 bp GACGAGATTACACATATAATCAACAACTTTAGGGATAGCTGCTGCTTCGTTTATAGGAGTAAGATCCCATaGAAAATTGTTATGGCAGTC +
Preference number: 4 (lower is better)
Translates to: DEITHIINNFRDSCCFVYRSKIP*KIVMAV
Trigger: GACTGCCATAACAATTTTCCATGGGATCTTACTCCT...ATAAACGAAGCAGCAGCTATCCCTAAAGTTGTTGATTATATGTGTAATCTCGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216951.2
CDS-3UTR CAA 90 bp CCCCTACCCACCAACTCCCACTTGGCCCTGGTGTTCCCCTGTACTGGCACATATTTTCTCAGTCCTCCTTaGGAAGGCATCTTTATAATA +
Preference number: 5 (lower is better)
Translates to: PLPTNSHLALVFPCTGTYFLSPP*EGIFII
Trigger: TATTATAAAGATGCCTTCCAAAGGAGGACTGAGAAA...ATATGTGCCAGTACAGGGGAACACCAGGGCCAAGTGGGAGTTGGTGGGTAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000216951.2
CDS-3UTR CAA 90 bp GTGTGGGCCTCTTCCTGTGTCTACATAAAAACACACACATATACACACATACACCGTGAGCTGTTTGAGTaGGGAATACAGTATAGGAGG +
Preference number: 5 (lower is better)
Translates to: VWASSCVYIKTHTYTHIHRELFE*GIQYRR
Trigger: CCTCCTATACTGTATTCCCAACTCAAACAGCTCACG...GTGTATGTGTGTATATGTGTGTGTTTTTATGTAGACACAGGAAGAGGCCCACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099832.5
ENSMUST00000216951.2
CDS-3UTR CAA 90 bp CACAACATAGCACTGCAACAATTTGTGACTTATGAACACAAGAGTATGTATTCCCGTGAGCTGTTTGAGTaGGGAATACAGTATAGGAGG +
Preference number: 5 (lower is better)
Translates to: HNIALQQFVTYEHKSMYSRELFE*GIQYRR
Trigger: CCTCCTATACTGTATTCCCAACTCAAACAGCTCACG...GGAATACATACTCTTGTGTTCATAAGTCACAAATTGTTGCAGTGCTATGTTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216951.2
CDS-3UTR CAA 90 bp GTGTGGGCCTCTTCCTGTGTCTACATAAAAACACACACATATACACACATACACTTTCTCAGTCCTCCTTaGGAAGGCATCTTTATAATA +
Preference number: 5 (lower is better)
Translates to: VWASSCVYIKTHTYTHIHFLSPP*EGIFII
Trigger: TATTATAAAGATGCCTTCCAAAGGAGGACTGAGAAA...GTGTATGTGTGTATATGTGTGTGTTTTTATGTAGACACAGGAAGAGGCCCACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099832.5
ENSMUST00000216951.2