Pregenerated sensors for OLFR1166 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000101078Ensembl transcript IDs: ENSMUST00000099833.6, ENSMUST00000217575.3
Found 18 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACTCTTACCACTCTTTGCCTCTCAATGTATCTCTGTCTTACTGTGTaGCTATATCTGAGTCTTGCCATCACATACACACACAGAGACACA | + |
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Preference number: 1 (lower is better) Translates to: TLTTLCLSMYLCLTV*LYLSLAITYTHRDT Trigger: TGTGTCTCTGTGTGTGTATGTGATGGCAAGACTCAGATATAGGCACACAGTAAGACAGAGATACATTGAGAGGCAAAGAGTGGTAAGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099833.6 ENSMUST00000217575.3 |
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| 3UTR GCA 72 bp | ACTCTTTGCCTCTCAATGTATCTCTGTCTTACTGTGTaGCTATATCTGAGTCTTGCCATCACATACACACAC | + |
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Preference number: 3 (lower is better) Translates to: TLCLSMYLCLTV*LYLSLAITYTH Trigger: GTGTGTGTATGTGATGGCAAGACTCAGATATAGGCACACAGTAAGACAGAGATACATTGAGAGGCAAAGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099833.6 ENSMUST00000217575.3 |
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| 3UTR TCA 72 bp | GTAAAATTTACACAATACAGCACAGAGACAACTTTGTaGGTTAAGAGCACAAGAGTATGGATTCCATCAAGA | + |
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Preference number: 3 (lower is better) Translates to: VKFTQYSTETTL*VKSTRVWIPSR Trigger: TCTTGATGGAATCCATACTCTTGTGCTCTTAACTCACAAAGTTGTCTCTGTGCTGTATTGTGTAAATTTTAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099833.6 ENSMUST00000217575.3 |
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| CDS-3UTR TCA 90 bp | ACCCAACTCTTACCACTCTTTGCCTCTCAATGTATCTCTGTCTTACTGTGTGCCCCCCACCAATGTTACTaGGTAGATGGCCAAGAACAG | + |
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Preference number: 4 (lower is better) Translates to: TQLLPLFASQCISVLLCAPHQCY*VDGQEQ Trigger: CTGTTCTTGGCCATCTACTCAGTAACATTGGTGGGG...GGCACACAGTAAGACAGAGATACATTGAGAGGCAAAGAGTGGTAAGAGTTGGGT 48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000099833.6 ENSMUST00000217575.3 |
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| CDS-3UTR TCA 90 bp | CTCTGTCTTACTGTGTGCCTATATCTGAGTCTTGCCATCACATACACACACAGACCCCACCAATGTTACTaGGTAGATGGCCAAGAACAG | + |
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Preference number: 4 (lower is better) Translates to: LCLTVCLYLSLAITYTHRPHQCY*VDGQEQ Trigger: CTGTTCTTGGCCATCTACTCAGTAACATTGGTGGGG...TCTGTGTGTGTATGTGATGGCAAGACTCAGATATAGGCACACAGTAAGACAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099833.6 ENSMUST00000217575.3 |
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| CDS-3UTR CCA 90 bp | ACCCAACTCTTACCACTCTTTGCCTCTCAATGTATCTCTGTCTTACTGTGTGCCACTAAGGATGTCAACTaGCTAAAGGAGGAGTCAGAG | + |
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Preference number: 4 (lower is better) Translates to: TQLLPLFASQCISVLLCATKDVN*LKEESE Trigger: CTCTGACTCCTCCTTTAGCCAGTTGACATCCTTAGT...GGCACACAGTAAGACAGAGATACATTGAGAGGCAAAGAGTGGTAAGAGTTGGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099833.6 ENSMUST00000217575.3 |
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| CDS-3UTR CCA 90 bp | CTCTGTCTTACTGTGTGCCTATATCTGAGTCTTGCCATCACATACACACACAGAAGGAAGAGGGGTTTTTaGAGCTGTGGATATTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: LCLTVCLYLSLAITYTHRRKRGF*SCGYSE Trigger: CTCAGAATATCCACAGCTCCAAAAACCCCTCTTCCT...TCTGTGTGTGTATGTGATGGCAAGACTCAGATATAGGCACACAGTAAGACAGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099833.6 ENSMUST00000217575.3 |
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| CDS-3UTR TCA 90 bp | CTCTGTCTTACTGTGTGCCTATATCTGAGTCTTGCCATCACATACACACACAGAAAGTACATGGGTGTGTaGAGTTTGGGATTGACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LCLTVCLYLSLAITYTHRKYMGV*SLGLTF Trigger: AAAGGTCAATCCCAAACTTCACACACCCATGTACTT...TCTGTGTGTGTATGTGATGGCAAGACTCAGATATAGGCACACAGTAAGACAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099833.6 ENSMUST00000217575.3 |
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| CDS-3UTR CCA 90 bp | CTCTGTCTTACTGTGTGCCTATATCTGAGTCTTGCCATCACATACACACACAGAATGTTACTGAGTAGATaGCCAAGAACAGGAGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: LCLTVCLYLSLAITYTHRMLLSR*PRTGGR Trigger: TCTTCCTCCTGTTCTTGGCCATCTACTCAGTAACAT...TCTGTGTGTGTATGTGATGGCAAGACTCAGATATAGGCACACAGTAAGACAGAG 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099833.6 ENSMUST00000217575.3 |
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| CDS-3UTR TCA 90 bp | CTCTGTCTTACTGTGTGCCTATATCTGAGTCTTGCCATCACATACACACACAGAGTACCATGCATGCTTTaGAAGATACAGTCCTATCTT | + |
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Preference number: 4 (lower is better) Translates to: LCLTVCLYLSLAITYTHRVPCML*KIQSYL Trigger: AAGATAGGACTGTATCTTTCAAAGCATGCATGGTAC...TCTGTGTGTGTATGTGATGGCAAGACTCAGATATAGGCACACAGTAAGACAGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099833.6 ENSMUST00000217575.3 |
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| CDS-3UTR CCA 90 bp | TCTTACCACTCTTTGCCTCTCAATGTATCTCTGTCTTACTGTGTGCCTATATCTAGGAAGAGGGGTTTTTaGAGCTGTGGATATTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: SYHSLPLNVSLSYCVPISRKRGF*SCGYSE Trigger: CTCAGAATATCCACAGCTCCAAAAACCCCTCTTCCT...AGATATAGGCACACAGTAAGACAGAGATACATTGAGAGGCAAAGAGTGGTAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099833.6 ENSMUST00000217575.3 |
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| CDS-3UTR TCA 90 bp | TCTTACCACTCTTTGCCTCTCAATGTATCTCTGTCTTACTGTGTGCCTATATCTAAGTACATGGGTGTGTaGAGTTTGGGATTGACCTTT | + |
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Preference number: 4 (lower is better) Translates to: SYHSLPLNVSLSYCVPISKYMGV*SLGLTF Trigger: AAAGGTCAATCCCAAACTTCACACACCCATGTACTT...AGATATAGGCACACAGTAAGACAGAGATACATTGAGAGGCAAAGAGTGGTAAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099833.6 ENSMUST00000217575.3 |
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| CDS-3UTR CCA 90 bp | TCTTACCACTCTTTGCCTCTCAATGTATCTCTGTCTTACTGTGTGCCTATATCTATGTTACTGAGTAGATaGCCAAGAACAGGAGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: SYHSLPLNVSLSYCVPISMLLSR*PRTGGR Trigger: TCTTCCTCCTGTTCTTGGCCATCTACTCAGTAACAT...AGATATAGGCACACAGTAAGACAGAGATACATTGAGAGGCAAAGAGTGGTAAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099833.6 ENSMUST00000217575.3 |
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| CDS-3UTR TCA 90 bp | TCTTACCACTCTTTGCCTCTCAATGTATCTCTGTCTTACTGTGTGCCTATATCTCAGTCCTATCTTCCATaGTCAAGATCTGCAAAAGTT | + |
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Preference number: 4 (lower is better) Translates to: SYHSLPLNVSLSYCVPISQSYLP*SRSAKV Trigger: AACTTTTGCAGATCTTGATCATGGAAGATAGGACTG...AGATATAGGCACACAGTAAGACAGAGATACATTGAGAGGCAAAGAGTGGTAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099833.6 ENSMUST00000217575.3 |
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| CDS-3UTR TCA 90 bp | CAAACTTCTGAATCCTACCATCCACAGTGTCTAGAAGTGAAGTTTCTAAATATTGTACCATGCATGCTTTaGAAGATACAGTCCTATCTT | + |
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Preference number: 4 (lower is better) Translates to: QTSESYHPQCLEVKFLNIVPCML*KIQSYL Trigger: AAGATAGGACTGTATCTTTCAAAGCATGCATGGTAC...AATATTTAGAAACTTCACTTCTAGACACTGTGGATGGTAGGATTCAGAAGTTTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099833.6 ENSMUST00000217575.3 |
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| CDS-3UTR CAA 90 bp | TCTTACCACTCTTTGCCTCTCAATGTATCTCTGTCTTACTGTGTGCCTATATCTAGAGCCGTGAGCTGTTaGAGTTGGGAACACAGTACA | + |
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Preference number: 5 (lower is better) Translates to: SYHSLPLNVSLSYCVPISRAVSC*SWEHST Trigger: TGTACTGTGTTCCCAACTCAAACAGCTCACGGCTCT...AGATATAGGCACACAGTAAGACAGAGATACATTGAGAGGCAAAGAGTGGTAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099833.6 ENSMUST00000217575.3 |
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| CDS-3UTR CAA 90 bp | CAAACTTCTGAATCCTACCATCCACAGTGTCTAGAAGTGAAGTTTCTAAATATTCGTGAGCTGTTTGAGTaGGGAACACAGTACAGGAGG | + |
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Preference number: 5 (lower is better) Translates to: QTSESYHPQCLEVKFLNIRELFE*GTQYRR Trigger: CCTCCTGTACTGTGTTCCCAACTCAAACAGCTCACG...AATATTTAGAAACTTCACTTCTAGACACTGTGGATGGTAGGATTCAGAAGTTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099833.6 ENSMUST00000217575.3 |
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| CDS-3UTR CAA 90 bp | CAAACTTCTGAATCCTACCATCCACAGTGTCTAGAAGTGAAGTTTCTAAATATTAGAGCCGTGAGCTGTTaGAGTTGGGAACACAGTACA | + |
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Preference number: 5 (lower is better) Translates to: QTSESYHPQCLEVKFLNIRAVSC*SWEHST Trigger: TGTACTGTGTTCCCAACTCAAACAGCTCACGGCTCT...AATATTTAGAAACTTCACTTCTAGACACTGTGGATGGTAGGATTCAGAAGTTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099833.6 ENSMUST00000217575.3 |
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