Pregenerated sensors for OLFR1162 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075139Ensembl transcript IDs: ENSMUST00000099837.2, ENSMUST00000183862.3
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGTCATCAGCTTCTGTCCATTGGTTGGATGCAAGTATCTGCATCTaGCTCTCTCACGTGCTTGTTGGACCTCTCAGCGAGCTACCATGC | + |
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Preference number: 1 (lower is better) Translates to: GSSASVHWLDASICI*LSHVLVGPLSELPC Trigger: GCATGGTAGCTCGCTGAGAGGTCCAACAAGCACGTGAGAGAGTCAGATGCAGATACTTGCATCCAACCAATGGACAGAAGCTGATGACCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183862.3 |
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| 3UTR CCA 90 bp | AGGGATATTGGGGCTTCAAATGAGTTCAGATTGCAGGTCTTCCTATaGGGTTCCCTTCCCCCTCAGTTTCTTCCAGCCCAATTCAACCAC | + |
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Preference number: 1 (lower is better) Translates to: RDIGASNEFRLQVFL*GSLPPQFLPAQFNH Trigger: GTGGTTGAATTGGGCTGGAAGAAACTGAGGGGGAAGGGAACCCCATAGGAAGACCTGCAATCTGAACTCATTTGAAGCCCCAATATCCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183862.3 |
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| 3UTR CCA 90 bp | CTCTCAGGACTCAGAGGGAAGGACCTTAGATTAAATGCCCAACCATaGGGAGAGGGAATTTATAGAGTCTACCTCCAGCAGAATGATAGA | + |
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Preference number: 1 (lower is better) Translates to: LSGLRGKDLRLNAQP*GEGIYRVYLQQNDR Trigger: TCTATCATTCTGCTGGAGGTAGACTCTATAAATTCCCTCTCCCCATGGTTGGGCATTTAATCTAAGGTCCTTCCCTCTGAGTCCTGAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183862.3 |
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| 3UTR TCA 90 bp | CATTCTTCTGCTGTATATAACTCATATCAGCTAGGGTCTGCTGCTTaGTTAGTGGCCCAGTGTCTCAGGGATATTGGGGCTTCAAATGAG | + |
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Preference number: 1 (lower is better) Translates to: HSSAVYNSYQLGSAA*LVAQCLRDIGASNE Trigger: CTCATTTGAAGCCCCAATATCCCTGAGACACTGGGCCACTAATCAAGCAGCAGACCCTAGCTGATATGAGTTATATACAGCAGAAGAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183862.3 |
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| 3UTR TCA 90 bp | TCTGCGACCTCAAATCTCTGGAAGGTTAGGTGCATCTTCTCTCACTaGGACAAGATAAGGCATTCTTCTGCTGTATATAACTCATATCAG | + |
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Preference number: 1 (lower is better) Translates to: SATSNLWKVRCIFSH*DKIRHSSAVYNSYQ Trigger: CTGATATGAGTTATATACAGCAGAAGAATGCCTTATCTTGTCTCAGTGAGAGAAGATGCACCTAACCTTCCAGAGATTTGAGGTCGCAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183862.3 |
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| 3UTR CCA 90 bp | TCTTTGACAAAGACTATGACAAAGGCAATGTACAAAAGAAAGTATTaGGTGGCTCACAGTTTTAGGTTGGAATTCATGACCATCATGGTG | + |
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Preference number: 1 (lower is better) Translates to: SLTKTMTKAMYKRKY*VAHSFRLEFMTIMV Trigger: CACCATGATGGTCATGAATTCCAACCTAAAACTGTGAGCCACCCAATACTTTCTTTTGTACATTGCCTTTGTCATAGTCTTTGTCAAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183862.3 |
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| 3UTR-3UTR CCA 90 bp | GGGCTTCAAATGAGTTCAGATTGCAGGTCTTCCTATGGGGTTCCCTTCCCCCTCAATCAAGTGGTGGAATaGGGTTGCCATCTCACAGTT | + |
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Preference number: 2 (lower is better) Translates to: GLQMSSDCRSSYGVPFPLNQVVE*GCHLTV Trigger: AACTGTGAGATGGCAACCCCATTCCACCACTTGATT...GAGGGGGAAGGGAACCCCATAGGAAGACCTGCAATCTGAACTCATTTGAAGCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183862.3 |
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| 3UTR-3UTR GCA 90 bp | GGGCTTCAAATGAGTTCAGATTGCAGGTCTTCCTATGGGGTTCCCTTCCCCCTCGAAATTTATCAGCTATaGAGCCTAGCAACTTTGCCC | + |
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Preference number: 2 (lower is better) Translates to: GLQMSSDCRSSYGVPFPLEIYQL*SLATLP Trigger: GGGCAAAGTTGCTAGGCTGCATAGCTGATAAATTTC...GAGGGGGAAGGGAACCCCATAGGAAGACCTGCAATCTGAACTCATTTGAAGCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183862.3 |
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| 3UTR-3UTR GCA 90 bp | CAATTTTTCATTCCATTCCCCCTCCACTCTCTCCAAGAGGATGTCAACTCTCACTCAGCTAGGGTCTGCTaGTTGATTAGTGGCCCAGTG | + |
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Preference number: 2 (lower is better) Translates to: QFFIPFPLHSLQEDVNSHSARVC*LISGPV Trigger: CACTGGGCCACTAATCAAGCAGCAGACCCTAGCTGA...GTGAGAGTTGACATCCTCTTGGAGAGAGTGGAGGGGGAATGGAATGAAAAATTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000183862.3 |
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| 3UTR-3UTR CCA 90 bp | CTCCGACAATTTTTCATTCCATTCCCCCTCCACTCTCTCCAAGAGGATGTCAACGCGACCTCAAATCTCTaGAAGGTTAGGTGCATCTTC | + |
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Preference number: 2 (lower is better) Translates to: LRQFFIPFPLHSLQEDVNATSNL*KVRCIF Trigger: GAAGATGCACCTAACCTTCCAGAGATTTGAGGTCGC...GTTGACATCCTCTTGGAGAGAGTGGAGGGGGAATGGAATGAAAAATTGTCGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000183862.3 |
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| 3UTR-3UTR GCA 90 bp | CTCCGACAATTTTTCATTCCATTCCCCCTCCACTCTCTCCAAGAGGATGTCAACGACTTTCCTACTCTCTaGGACCTCAAATCTCTGGAA | + |
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Preference number: 2 (lower is better) Translates to: LRQFFIPFPLHSLQEDVNDFPTL*DLKSLE Trigger: TTCCAGAGATTTGAGGTCGCAGAGAGTAGGAAAGTC...GTTGACATCCTCTTGGAGAGAGTGGAGGGGGAATGGAATGAAAAATTGTCGGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000183862.3 |
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| 3UTR-3UTR CCA 90 bp | CAATTTTTCATTCCATTCCCCCTCCACTCTCTCCAAGAGGATGTCAACTCTCACTCAGCTTCTGTCCATTaGTTGGATGCAAGTATCTGC | + |
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Preference number: 2 (lower is better) Translates to: QFFIPFPLHSLQEDVNSHSASVH*LDASIC Trigger: GCAGATACTTGCATCCAACCAATGGACAGAAGCTGA...GTGAGAGTTGACATCCTCTTGGAGAGAGTGGAGGGGGAATGGAATGAAAAATTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000183862.3 |
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| 3UTR-3UTR CCA 90 bp | CAATTTTTCATTCCATTCCCCCTCCACTCTCTCCAAGAGGATGTCAACTCTCACAGACAGGAAAAATATTaGCCCATAGTTTTGCATAGT | + |
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Preference number: 2 (lower is better) Translates to: QFFIPFPLHSLQEDVNSHRQEKY*PIVLHS Trigger: ACTATGCAAAACTATGGGCCAATATTTTTCCTGTCT...GTGAGAGTTGACATCCTCTTGGAGAGAGTGGAGGGGGAATGGAATGAAAAATTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000183862.3 |
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| 3UTR CAA 90 bp | AAGGCAATGTACAAAAGAAAGTATTGGGTGGCTCACAGTTTTAGGTaGGAATTCATGACCATCATGGTGGGAAACATGGTAGTAGAAAGA | + |
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Preference number: 2 (lower is better) Translates to: KAMYKRKYWVAHSFR*EFMTIMVGNMVVER Trigger: TCTTTCTACTACCATGTTTCCCACCATGATGGTCATGAATTCCAACCTAAAACTGTGAGCCACCCAATACTTTCTTTTGTACATTGCCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183862.3 |
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| 3UTR-3UTR TCA 90 bp | TTTTCTAGCACCTATATGGCAGCTTACAACTATCAATCACCCCAATTAGAATCTTTAGGTTGGAATTCATaGCCATCATGGTGGGAAACA | + |
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Preference number: 2 (lower is better) Translates to: FSSTYMAAYNYQSPQLESLGWNS*PSWWET Trigger: TGTTTCCCACCATGATGGTCATGAATTCCAACCTAA...AGATTCTAATTGGGGTGATTGATAGTTGTAAGCTGCCATATAGGTGCTAGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183862.3 |
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| 3UTR CAA 90 bp | CATCCTATGTCCAAGACTGAGAGCTTTAAAATAAAGGAGTGTGGATaGTTCTCAGACACTAATACTTTCACTTTTTCAAGTATTCCTCAT | + |
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Preference number: 2 (lower is better) Translates to: HPMSKTESFKIKECG*FSDTNTFTFSSIPH Trigger: ATGAGGAATACTTGAAAAAGTGAAAGTATTAGTGTCTGAGAACAATCCACACTCCTTTATTTTAAAGCTCTCAGTCTTGGACATAGGATG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183862.3 |
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| 3UTR-3UTR CAA 90 bp | GGGCTTCAAATGAGTTCAGATTGCAGGTCTTCCTATGGGGTTCCCTTCCCCCTCATACCTCAGTCCCACTaGGGAGGGAGAAGAAGTCAA | + |
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Preference number: 3 (lower is better) Translates to: GLQMSSDCRSSYGVPFPLIPQSH*GGRRSQ Trigger: TTGACTTCTTCTCCCTCCCAAGTGGGACTGAGGTAT...GAGGGGGAAGGGAACCCCATAGGAAGACCTGCAATCTGAACTCATTTGAAGCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183862.3 |
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| 3UTR TCA 72 bp | GCTTCTGTCCATTGGTTGGATGCAAGTATCTGCATCTaGCTCTCTCACGTGCTTGTTGGACCTCTCAGCGAG | + |
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Preference number: 3 (lower is better) Translates to: ASVHWLDASICI*LSHVLVGPLSE Trigger: CTCGCTGAGAGGTCCAACAAGCACGTGAGAGAGTCAGATGCAGATACTTGCATCCAACCAATGGACAGAAGC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183862.3 |
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| 3UTR TCA 72 bp | GCTGTATATAACTCATATCAGCTAGGGTCTGCTGCTTaGTTAGTGGCCCAGTGTCTCAGGGATATTGGGGCT | + |
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Preference number: 3 (lower is better) Translates to: AVYNSYQLGSAA*LVAQCLRDIGA Trigger: AGCCCCAATATCCCTGAGACACTGGGCCACTAATCAAGCAGCAGACCCTAGCTGATATGAGTTATATACAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183862.3 |
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| 3UTR CCA 72 bp | CTCAGAGGGAAGGACCTTAGATTAAATGCCCAACCATaGGGAGAGGGAATTTATAGAGTCTACCTCCAGCAG | + |
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Preference number: 3 (lower is better) Translates to: LRGKDLRLNAQP*GEGIYRVYLQQ Trigger: CTGCTGGAGGTAGACTCTATAAATTCCCTCTCCCCATGGTTGGGCATTTAATCTAAGGTCCTTCCCTCTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183862.3 |
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| 3UTR-3UTR CAA 90 bp | CAATTTTTCATTCCATTCCCCCTCCACTCTCTCCAAGAGGATGTCAACTCTCACATCAGCTTCTGTCCATaGGTTGGATGCAAGTATCTG | + |
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Preference number: 3 (lower is better) Translates to: QFFIPFPLHSLQEDVNSHISFCP*VGCKYL Trigger: CAGATACTTGCATCCAACCAATGGACAGAAGCTGAT...GTGAGAGTTGACATCCTCTTGGAGAGAGTGGAGGGGGAATGGAATGAAAAATTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000183862.3 |
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| 3UTR-3UTR CAA 90 bp | CTCCGACAATTTTTCATTCCATTCCCCCTCCACTCTCTCCAAGAGGATGTCAACTGGGATTTAAGCTTTTaGCCCAATAATATCCAAGTC | + |
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Preference number: 3 (lower is better) Translates to: LRQFFIPFPLHSLQEDVNWDLSF*PNNIQV Trigger: GACTTGGATATTATTGGGCAAAAAGCTTAAATCCCA...GTTGACATCCTCTTGGAGAGAGTGGAGGGGGAATGGAATGAAAAATTGTCGGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000183862.3 |
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| 3UTR-3UTR CAA 90 bp | CAATTTTTCATTCCATTCCCCCTCCACTCTCTCCAAGAGGATGTCAACTCTCACTCATCCTGTCCTGTTTaGCAGTCTTTTCTATGGAAA | + |
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Preference number: 3 (lower is better) Translates to: QFFIPFPLHSLQEDVNSHSSCPV*QSFLWK Trigger: TTTCCATAGAAAAGACTGCAAAACAGGACAGGATGA...GTGAGAGTTGACATCCTCTTGGAGAGAGTGGAGGGGGAATGGAATGAAAAATTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000183862.3 |
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| 3UTR TCA 72 bp | AGAATTCAAGAAGATCAAGAAGCTGAAGAATTTAAGTaGGGATACCTCAGTCCCACTTGGGAGGGAGAAGAA | + |
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Preference number: 3 (lower is better) Translates to: RIQEDQEAEEFK*GYLSPTWEGEE Trigger: TTCTTCTCCCTCCCAAGTGGGACTGAGGTATCCTCACTTAAATTCTTCAGCTTCTTGATCTTCTTGAATTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183862.3 |
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| 3UTR TCA 72 bp | TATCAATCACCCCAATTAGAATCTAATATCTTCTTCTaGTCTCTGAACATACCAGGCGCACACATGGTGCAT | + |
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Preference number: 3 (lower is better) Translates to: YQSPQLESNIFF*SLNIPGAHMVH Trigger: ATGCACCATGTGTGCGCCTGGTATGTTCAGAGATCAGAAGAAGATATTAGATTCTAATTGGGGTGATTGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183862.3 |
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| 3UTR TCA 72 bp | AGCAGACATAATAAAAATGGGCAACCTAGAGAAGTATaGGATGCGGAGGGATCCTTTAGAATCTTCCAGAAA | + |
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Preference number: 3 (lower is better) Translates to: SRHNKNGQPREV*DAEGSFRIFQK Trigger: TTTCTGGAAGATTCTAAAGGATCCCTCCGCATCTCATACTTCTCTAGGTTGCCCATTTTTATTATGTCTGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183862.3 |
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| 3UTR TCA 72 bp | TCAAATCTCTGGAAGGTTAGGTGCATCTTCTCTCACTaGGACAAGATAAGGCATTCTTCTGCTGTATATAAC | + |
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Preference number: 3 (lower is better) Translates to: SNLWKVRCIFSH*DKIRHSSAVYN Trigger: GTTATATACAGCAGAAGAATGCCTTATCTTGTCTCAGTGAGAGAAGATGCACCTAACCTTCCAGAGATTTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183862.3 |
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| CDS-3UTR TCA 90 bp | GGGCTTCAAATGAGTTCAGATTGCAGGTCTTCCTATGGGGTTCCCTTCCCCCTCGCTCAGGGTAGTCTGTaGAGCCCAACAGGGAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: GLQMSSDCRSSYGVPFPLAQGSL*SPTGRR Trigger: TCTTCTCCCTGTTGGGCTTCACAGACTACCCTGAGC...GAGGGGGAAGGGAACCCCATAGGAAGACCTGCAATCTGAACTCATTTGAAGCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183862.3 |
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| CDS-3UTR CCA 90 bp | GGGCTTCAAATGAGTTCAGATTGCAGGTCTTCCTATGGGGTTCCCTTCCCCCTCACAGCCTTGGTGACATaGCCACAGTATACAGCAAGG | + |
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Preference number: 4 (lower is better) Translates to: GLQMSSDCRSSYGVPFPLTALVT*PQYTAR Trigger: CCTTGCTGTATACTGTGGCCATGTCACCAAGGCTGT...GAGGGGGAAGGGAACCCCATAGGAAGACCTGCAATCTGAACTCATTTGAAGCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183862.3 |
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| CDS-3UTR TCA 90 bp | CTCCGACAATTTTTCATTCCATTCCCCCTCCACTCTCTCCAAGAGGATGTCAACGATGCACAGCCTTGGTaGCATGGCCACAGTATACAG | + |
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Preference number: 4 (lower is better) Translates to: LRQFFIPFPLHSLQEDVNDAQPW*HGHSIQ Trigger: CTGTATACTGTGGCCATGTCACCAAGGCTGTGCATC...GTTGACATCCTCTTGGAGAGAGTGGAGGGGGAATGGAATGAAAAATTGTCGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000183862.3 |
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| CDS-3UTR TCA 90 bp | GGGCTTCAAATGAGTTCAGATTGCAGGTCTTCCTATGGGGTTCCCTTCCCCCTCTATGCTCCAGATATATaGCCCAGTCACAAGCAGGAT | + |
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Preference number: 4 (lower is better) Translates to: GLQMSSDCRSSYGVPFPLYAPDI*PSHKQD Trigger: ATCCTGCTTGTGACTGGGTCATATATCTGGAGCATA...GAGGGGGAAGGGAACCCCATAGGAAGACCTGCAATCTGAACTCATTTGAAGCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183862.3 |
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| CDS-3UTR TCA 90 bp | CTCCGACAATTTTTCATTCCATTCCCCCTCCACTCTCTCCAAGAGGATGTCAACGAAAGTATGGTTCCGTaGAAAATTGTGATGGCAGTC | + |
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Preference number: 4 (lower is better) Translates to: LRQFFIPFPLHSLQEDVNESMVP*KIVMAV Trigger: GACTGCCATCACAATTTTTCACGGAACCATACTTTC...GTTGACATCCTCTTGGAGAGAGTGGAGGGGGAATGGAATGAAAAATTGTCGGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000183862.3 |
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| CDS-3UTR GCA 90 bp | CTCCGACAATTTTTCATTCCATTCCCCCTCCACTCTCTCCAAGAGGATGTCAACGTTGATATTGATGAGTaGTATCATCCCAAGGTTTCC | + |
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Preference number: 4 (lower is better) Translates to: LRQFFIPFPLHSLQEDVNVDIDE*YHPKVS Trigger: GGAAACCTTGGGATGATAGCACTCATCAATATCAAC...GTTGACATCCTCTTGGAGAGAGTGGAGGGGGAATGGAATGAAAAATTGTCGGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000183862.3 |
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| CDS-3UTR CCA 90 bp | CAATTTTTCATTCCATTCCCCCTCCACTCTCTCCAAGAGGATGTCAACTCTCACGTGCTCACTAATTTCTaGAAAGCATCCTTCACATCC | + |
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Preference number: 4 (lower is better) Translates to: QFFIPFPLHSLQEDVNSHVLTNF*KASFTS Trigger: GGATGTGAAGGATGCTTTCCAGAAATTAGTGAGCAC...GTGAGAGTTGACATCCTCTTGGAGAGAGTGGAGGGGGAATGGAATGAAAAATTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000183862.3 |
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| CDS-3UTR TCA 90 bp | CTCCGACAATTTTTCATTCCATTCCCCCTCCACTCTCTCCAAGAGGATGTCAACGTGTACTCACTTCATTaGAGGTTGCAAAACAAAAGA | + |
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Preference number: 4 (lower is better) Translates to: LRQFFIPFPLHSLQEDVNVYSLH*RLQNKR Trigger: TCTTTTGTTTTGCAACCTTCAATGAAGTGAGTACAC...GTTGACATCCTCTTGGAGAGAGTGGAGGGGGAATGGAATGAAAAATTGTCGGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000183862.3 |
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| CDS-3UTR GCA 90 bp | TTTTCTAGCACCTATATGGCAGCTTACAACTATCAATCACCCCAATTAGAATCTCAGTCACAAGCAGGATaGACAGCCTTGGTGACATGG | + |
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Preference number: 4 (lower is better) Translates to: FSSTYMAAYNYQSPQLESQSQAG*TALVTW Trigger: CCATGTCACCAAGGCTGTGCATCCTGCTTGTGACTG...AGATTCTAATTGGGGTGATTGATAGTTGTAAGCTGCCATATAGGTGCTAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183862.3 |
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| 3UTR CAA 72 bp | TACAAAAGAAAGTATTGGGTGGCTCACAGTTTTAGGTaGGAATTCATGACCATCATGGTGGGAAACATGGTA | + |
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Preference number: 4 (lower is better) Translates to: YKRKYWVAHSFR*EFMTIMVGNMV Trigger: TACCATGTTTCCCACCATGATGGTCATGAATTCCAACCTAAAACTGTGAGCCACCCAATACTTTCTTTTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183862.3 |
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| 3UTR CAA 72 bp | TCCAAGACTGAGAGCTTTAAAATAAAGGAGTGTGGATaGTTCTCAGACACTAATACTTTCACTTTTTCAAGT | + |
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Preference number: 4 (lower is better) Translates to: SKTESFKIKECG*FSDTNTFTFSS Trigger: ACTTGAAAAAGTGAAAGTATTAGTGTCTGAGAACAATCCACACTCCTTTATTTTAAAGCTCTCAGTCTTGGA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183862.3 |
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| 3UTR CAA 72 bp | AGTTTAGGCAATTCTCTCATTTCATCCTGTCCTGTTTaGCAGTCTTTTCTATGGAAAACTTTCTTCTTACTT | + |
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Preference number: 4 (lower is better) Translates to: SLGNSLISSCPV*QSFLWKTFFLL Trigger: AAGTAAGAAGAAAGTTTTCCATAGAAAAGACTGCAAAACAGGACAGGATGAAATGAGAGAATTGCCTAAACT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183862.3 |
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| CDS-3UTR CAA 90 bp | GGGCTTCAAATGAGTTCAGATTGCAGGTCTTCCTATGGGGTTCCCTTCCCCCTCCAGGTAGAGAAGGCTTaGCGACGTCCACTGGCAGAT | + |
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Preference number: 5 (lower is better) Translates to: GLQMSSDCRSSYGVPFPLQVEKA*RRPLAD Trigger: ATCTGCCAGTGGACGTCGCAAAGCCTTCTCTACCTG...GAGGGGGAAGGGAACCCCATAGGAAGACCTGCAATCTGAACTCATTTGAAGCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183862.3 |
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| CDS GCA 90 bp | ATGGAGCAAATATGCTCCAGATATATGACCCAGTCACAAGCAGGATaGACAGCCTTGGTGACATGGCCACAGTATACAGCAAGGGATTAC | + |
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Preference number: 5 (lower is better) Translates to: MEQICSRYMTQSQAG*TALVTWPQYTARDY Trigger: GTAATCCCTTGCTGTATACTGTGGCCATGTCACCAAGGCTGTGCATCCTGCTTGTGACTGGGTCATATATCTGGAGCATATTTGCTCCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099837.2 ENSMUST00000183862.3 |
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| CDS-3UTR CAA 90 bp | CTCCGACAATTTTTCATTCCATTCCCCCTCCACTCTCTCCAAGAGGATGTCAACGGCCACTTTAACGACTaGCCTAGAGTTTTTGGAGTT | + |
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Preference number: 5 (lower is better) Translates to: LRQFFIPFPLHSLQEDVNGHFND*PRVFGV Trigger: AACTCCAAAAACTCTAGGCAAGTCGTTAAAGTGGCC...GTTGACATCCTCTTGGAGAGAGTGGAGGGGGAATGGAATGAAAAATTGTCGGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000183862.3 |
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| CDS GCA 90 bp | ACTTTAGCTGCAGAGCATAGCAAAGGAGAATCAATGGAGCAAATATaGTCCAGATATATGACCCAGTCACAAGCAGGATGCACAGCCTTG | + |
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Preference number: 5 (lower is better) Translates to: TLAAEHSKGESMEQI*SRYMTQSQAGCTAL Trigger: CAAGGCTGTGCATCCTGCTTGTGACTGGGTCATATATCTGGAGCATATTTGCTCCATTGATTCTCCTTTGCTATGCTCTGCAGCTAAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099837.2 ENSMUST00000183862.3 |
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| CDS-3UTR CAA 90 bp | CAATTTTTCATTCCATTCCCCCTCCACTCTCTCCAAGAGGATGTCAACTCTCACACTTGCCTAGAGTTTTaGGAGTTAGGTATACAGTAT | + |
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Preference number: 5 (lower is better) Translates to: QFFIPFPLHSLQEDVNSHTCLEF*ELGIQY Trigger: ATACTGTATACCTAACTCCAAAAACTCTAGGCAAGT...GTGAGAGTTGACATCCTCTTGGAGAGAGTGGAGGGGGAATGGAATGAAAAATTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000183862.3 |
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| CDS-3UTR CAA 90 bp | TACAAAAGAAAGTATTGGGTGGCTCACAGTTTTAGGTTGGAATTCATGACCATCAACTTAGGGTTGATATaGATGAGTGCTATCATCCCA | + |
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Preference number: 5 (lower is better) Translates to: YKRKYWVAHSFRLEFMTINLGLI*MSAIIP Trigger: TGGGATGATAGCACTCATCAATATCAACCCTAAGTT...GATGGTCATGAATTCCAACCTAAAACTGTGAGCCACCCAATACTTTCTTTTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183862.3 |
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| CDS-3UTR CAA 90 bp | TGCCCAATAATATCCAAGTCCACCCTTAGAAATAAAATCATTCGAACATTTTCCCGTCCACTGGCAGATTaGATTTTTAATACCGTCACG | + |
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Preference number: 5 (lower is better) Translates to: CPIISKSTLRNKIIRTFSRPLAD*IFNTVT Trigger: CGTGACGGTATTAAAAATCAAATCTGCCAGTGGACG...GGAAAATGTTCGAATGATTTTATTTCTAAGGGTGGACTTGGATATTATTGGGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000183862.3 |
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| CDS-3UTR CAA 90 bp | ACATCTGCTAACAATGACAGAATTTCTGTGAAGTTTACCATCAGAATCTTTCTGAGTGTACTCACTTCATaGAAGGTTGCAAAACAAAAG | + |
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Preference number: 5 (lower is better) Translates to: TSANNDRISVKFTIRIFLSVLTS*KVAKQK Trigger: CTTTTGTTTTGCAACCTTCAATGAAGTGAGTACACT...CAGAAAGATTCTGATGGTAAACTTCACAGAAATTCTGTCATTGTTAGCAGATGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183862.3 |
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| CDS GCA 72 bp | ATATGCTCCAGATATATGACCCAGTCACAAGCAGGATaGACAGCCTTGGTGACATGGCCACAGTATACAGCA | + |
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Preference number: 6 (lower is better) Translates to: ICSRYMTQSQAG*TALVTWPQYTA Trigger: TGCTGTATACTGTGGCCATGTCACCAAGGCTGTGCATCCTGCTTGTGACTGGGTCATATATCTGGAGCATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099837.2 ENSMUST00000183862.3 |
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| CDS CAA 72 bp | AGATATATGACCCAGTCACAAGCAGGATGCACAGCCTaGGTGACATGGCCACAGTATACAGCAAGGGATTAC | + |
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Preference number: 6 (lower is better) Translates to: RYMTQSQAGCTA*VTWPQYTARDY Trigger: GTAATCCCTTGCTGTATACTGTGGCCATGTCACCAAGGCTGTGCATCCTGCTTGTGACTGGGTCATATATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099837.2 ENSMUST00000183862.3 |
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| CDS GCA 72 bp | GCAGAGCATAGCAAAGGAGAATCAATGGAGCAAATATaGTCCAGATATATGACCCAGTCACAAGCAGGATGC | + |
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Preference number: 6 (lower is better) Translates to: AEHSKGESMEQI*SRYMTQSQAGC Trigger: GCATCCTGCTTGTGACTGGGTCATATATCTGGAGCATATTTGCTCCATTGATTCTCCTTTGCTATGCTCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099837.2 ENSMUST00000183862.3 |
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