Pregenerated sensors for OLFR1160 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075141Ensembl transcript IDs: ENSMUST00000099839.4, ENSMUST00000215457.2
Found 70 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCATGGACGGTCCCAAGGTCCCCAGAGGACTCTCCACACCGCAGGTaGCCTAGCACACTCAGTATCTTAGGATCACTGAAGAGAGTTAGC | + |
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Preference number: 1 (lower is better) Translates to: PWTVPRSPEDSPHRR*PSTLSILGSLKRVS Trigger: GCTAACTCTCTTCAGTGATCCTAAGATACTGAGTGTGCTAGGGCACCTGCGGTGTGGAGAGTCCTCTGGGGACCTTGGGACCGTCCATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| 3UTR TCA 90 bp | AGCAACAGAGCTTTTTGGCCTTCCTCTTCACCCAGGAAGTGGATCTaGGCTCCAGACTTCTGTGTACTTCCCTGCAAGAGGAGAGCTGGC | + |
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Preference number: 1 (lower is better) Translates to: SNRAFWPSSSPRKWI*APDFCVLPCKRRAG Trigger: GCCAGCTCTCCTCTTGCAGGGAAGTACACAGAAGTCTGGAGCTCAGATCCACTTCCTGGGTGAAGAGGAAGGCCAAAAAGCTCTGTTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| 3UTR GCA 90 bp | TCCAAAGTCTCTAAGAGACCAGTCTGTGCAGGAGAGCACGTGGGCTaGAGAAGCAACAGAGCTTTTTGGCCTTCCTCTTCACCCAGGAAG | + |
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Preference number: 1 (lower is better) Translates to: SKVSKRPVCAGEHVG*RSNRAFWPSSSPRK Trigger: CTTCCTGGGTGAAGAGGAAGGCCAAAAAGCTCTGTTGCTTCTGCAGCCCACGTGCTCTCCTGCACAGACTGGTCTCTTAGAGACTTTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| 3UTR CCA 90 bp | ATGTATCCAAAGTCTCTAAGAGACCAGTCTGTGCAGGAGAGCACGTaGGCTGCAGAAGCAACAGAGCTTTTTGGCCTTCCTCTTCACCCA | + |
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Preference number: 1 (lower is better) Translates to: MYPKSLRDQSVQEST*AAEATELFGLPLHP Trigger: TGGGTGAAGAGGAAGGCCAAAAAGCTCTGTTGCTTCTGCAGCCCACGTGCTCTCCTGCACAGACTGGTCTCTTAGAGACTTTGGATACAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| 3UTR CCA 90 bp | TGCCAGCAGGATCAGGGGACAAATGAAACCCAACCAACCAGCAAATaGGGTTCTTTCTTTGCACCAGCTCCATGCCATCTTGGGTGTGAA | + |
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Preference number: 1 (lower is better) Translates to: CQQDQGTNETQPTSK*GSFFAPAPCHLGCE Trigger: TTCACACCCAAGATGGCATGGAGCTGGTGCAAAGAAAGAACCCCATTTGCTGGTTGGTTGGGTTTCATTTGTCCCCTGATCCTGCTGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| 3UTR CCA 90 bp | GCAAAATGCAAACATAAGAATCTTACTAACAGAAACCAAGACCACTaGGCATCATCAGAACCCAGTATGTCCACCACAGTGTGTCCTGGA | + |
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Preference number: 1 (lower is better) Translates to: AKCKHKNLTNRNQDH*ASSEPSMSTTVCPG Trigger: TCCAGGACACACTGTGGTGGACATACTGGGTTCTGATGATGCCCAGTGGTCTTGGTTTCTGTTAGTAAGATTCTTATGTTTGCATTTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| 3UTR TCA 90 bp | TTGGCCACAGTGACACAGAGAATGACTTTTGTGGTAGTCTTCTTGTaGAAGAAACTCACTAGCTGTCCTTCCAATAACACTCAACCTTTA | + |
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Preference number: 1 (lower is better) Translates to: LATVTQRMTFVVVFL*KKLTSCPSNNTQPL Trigger: TAAAGGTTGAGTGTTATTGGAAGGACAGCTAGTGAGTTTCTTTCACAAGAAGACTACCACAAAAGTCATTCTCTGTGTCACTGTGGCCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| 3UTR TCA 90 bp | TACCAGTGTGAAATTCCACAGGCTGAACCATATGGCTATAATTTCTaGATGATTAATTTGGAAGAGTCTGTGATCAGGCATGGCTTTGGT | + |
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Preference number: 1 (lower is better) Translates to: YQCEIPQAEPYGYNF*MINLEESVIRHGFG Trigger: ACCAAAGCCATGCCTGATCACAGACTCTTCCAAATTAATCATTCAGAAATTATAGCCATATGGTTCAGCCTGTGGAATTTCACACTGGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| 3UTR CCA 90 bp | TTCAGCCAGAGACAGCTAGAACATCTAACACAAGAGATTACCAGATaGCAAAATGCAAACATAAGAATCTTACTAACAGAAACCAAGACC | + |
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Preference number: 1 (lower is better) Translates to: FSQRQLEHLTQEITR*QNANIRILLTETKT Trigger: GGTCTTGGTTTCTGTTAGTAAGATTCTTATGTTTGCATTTTGCCATCTGGTAATCTCTTGTGTTAGATGTTCTAGCTGTCTCTGGCTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| 3UTR GCA 90 bp | TTAGTCCTGGGTAAGAGCTATGCATATGATTTCATTGGTGATCCATaGAATCCATCTAATTTCCCTGCTAAGGCTTTAACTACAATGTTA | + |
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Preference number: 1 (lower is better) Translates to: LVLGKSYAYDFIGDP*NPSNFPAKALTTML Trigger: TAACATTGTAGTTAAAGCCTTAGCAGGGAAATTAGATGGATTGCATGGATCACCAATGAAATCATATGCATAGCTCTTACCCAGGACTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| 3UTR GCA 90 bp | GAGCATCAGCAACAGAATACAAGAAATGGAAGAGAGAATCTCAGGTaGAGAAGATTCCATAGAAAACATGAACATGACAATCAAATAAAA | + |
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Preference number: 1 (lower is better) Translates to: EHQQQNTRNGRENLR*RRFHRKHEHDNQIK Trigger: TTTTATTTGATTGTCATGTTCATGTTTTCTATGGAATCTTCTGCACCTGAGATTCTCTCTTCCATTTCTTGTATTCTGTTGCTGATGCTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| 3UTR-3UTR GCA 90 bp | GCCTCCAGAGAGGGCTCTGACCCCAGGACTCAGGTGAGGGTGCCATCATGTATCAAGAGGAGAGCTGGCTaGAGAGAGTGCTCTAACCAC | + |
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Preference number: 2 (lower is better) Translates to: ASREGSDPRTQVRVPSCIKRRAG*RECSNH Trigger: GTGGTTAGAGCACTCTCTGCAGCCAGCTCTCCTCTT...GATACATGATGGCACCCTCACCTGAGTCCTGGGGTCAGAGCCCTCTCTGGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| 3UTR-3UTR GCA 90 bp | GCCTCCAGAGAGGGCTCTGACCCCAGGACTCAGGTGAGGGTGCCATCATGTATCGGAGAGCACGTGGGCTaGAGAAGCAACAGAGCTTTT | + |
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Preference number: 2 (lower is better) Translates to: ASREGSDPRTQVRVPSCIGEHVG*RSNRAF Trigger: AAAAGCTCTGTTGCTTCTGCAGCCCACGTGCTCTCC...GATACATGATGGCACCCTCACCTGAGTCCTGGGGTCAGAGCCCTCTCTGGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| 3UTR CAA 90 bp | AGTCTGTGCAGGAGAGCACGTGGGCTGCAGAAGCAACAGAGCTTTTaGGCCTTCCTCTTCACCCAGGAAGTGGATCTGAGCTCCAGACTT | + |
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Preference number: 2 (lower is better) Translates to: SLCRRARGLQKQQSF*AFLFTQEVDLSSRL Trigger: AAGTCTGGAGCTCAGATCCACTTCCTGGGTGAAGAGGAAGGCCAAAAAGCTCTGTTGCTTCTGCAGCCCACGTGCTCTCCTGCACAGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| 3UTR-3UTR TCA 90 bp | ACCTGGAGGTTCTTGTGCCAGCAGGATCAGGGGACAAATGAAACCCAACCAACCGACTCAGGAGGGAGTTaGACTCCCAGGAGTGCTAAC | + |
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Preference number: 2 (lower is better) Translates to: TWRFLCQQDQGTNETQPTDSGGS*TPRSAN Trigger: GTTAGCACTCCTGGGAGTTCAACTCCCTCCTGAGTC...GGTTGGTTGGGTTTCATTTGTCCCCTGATCCTGCTGGCACAAGAACCTCCAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| 3UTR-3UTR GCA 90 bp | ACCTGGAGGTTCTTGTGCCAGCAGGATCAGGGGACAAATGAAACCCAACCAACCGCTGGCTGCAGAGAGTaGTCTAACCACTGGGACTCA | + |
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Preference number: 2 (lower is better) Translates to: TWRFLCQQDQGTNETQPTAGCRE*SNHWDS Trigger: TGAGTCCCAGTGGTTAGAGCACTCTCTGCAGCCAGC...GGTTGGTTGGGTTTCATTTGTCCCCTGATCCTGCTGGCACAAGAACCTCCAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| 3UTR-3UTR CCA 90 bp | TCCAGACTTCTGTGTACTTCCCTGCAAGAGGAGAGCTGGCTGCAGAGAGTGCTCAGAAACCAAGACCACTaGGCATCATCAGAACCCAGT | + |
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Preference number: 2 (lower is better) Translates to: SRLLCTSLQEESWLQRVLRNQDH*ASSEPS Trigger: ACTGGGTTCTGATGATGCCCAGTGGTCTTGGTTTCT...GAGCACTCTCTGCAGCCAGCTCTCCTCTTGCAGGGAAGTACACAGAAGTCTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| 3UTR-3UTR CCA 90 bp | TCTTGGGCACAAACTTGGTGGATGGTCCCAAGATCCCCAGAGGACGCTCCATGCTATGTTCTAAAAGCCTaGCATGGTGGTGAACACCTT | + |
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Preference number: 2 (lower is better) Translates to: SWAQTWWMVPRSPEDAPCYVLKA*HGGEHL Trigger: AAGGTGTTCACCACCATGCCAGGCTTTTAGAACATA...GCATGGAGCGTCCTCTGGGGATCTTGGGACCATCCACCAAGTTTGTGCCCAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| 3UTR-3UTR CCA 90 bp | GGAGTGCTAACAGAGGCTAAAGAATCACAGAAGGAGCAAGCTTCAGCCAGAGACCACCACAGTGTGTCCTaGATACTCCAACACACCAGA | + |
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Preference number: 2 (lower is better) Translates to: GVLTEAKESQKEQASARDHHSVS*ILQHTR Trigger: TCTGGTGTGTTGGAGTATCCAGGACACACTGTGGTG...GTCTCTGGCTGAAGCTTGCTCCTTCTGTGATTCTTTAGCCTCTGTTAGCACTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| 3UTR-3UTR CCA 90 bp | TCTTGGGCACAAACTTGGTGGATGGTCCCAAGATCCCCAGAGGACGCTCCATGCAAGATCACTAGTGAGTaGAACACAACATCTGTTCCA | + |
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Preference number: 2 (lower is better) Translates to: SWAQTWWMVPRSPEDAPCKITSE*NTTSVP Trigger: TGGAACAGATGTTGTGTTCCACTCACTAGTGATCTT...GCATGGAGCGTCCTCTGGGGATCTTGGGACCATCCACCAAGTTTGTGCCCAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| 3UTR-3UTR TCA 90 bp | GGAGTGCTAACAGAGGCTAAAGAATCACAGAAGGAGCAAGCTTCAGCCAGAGACGTGGTAGTCTTCTTGTaGAAGAAACTCACTAGCTGT | + |
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Preference number: 2 (lower is better) Translates to: GVLTEAKESQKEQASARDVVVFL*KKLTSC Trigger: ACAGCTAGTGAGTTTCTTTCACAAGAAGACTACCAC...GTCTCTGGCTGAAGCTTGCTCCTTCTGTGATTCTTTAGCCTCTGTTAGCACTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| 3UTR-3UTR CCA 90 bp | TCCAGACTTCTGTGTACTTCCCTGCAAGAGGAGAGCTGGCTGCAGAGAGTGCTCCAAGAGATTACCAGATaGCAAAATGCAAACATAAGA | + |
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Preference number: 2 (lower is better) Translates to: SRLLCTSLQEESWLQRVLQEITR*QNANIR Trigger: TCTTATGTTTGCATTTTGCCATCTGGTAATCTCTTG...GAGCACTCTCTGCAGCCAGCTCTCCTCTTGCAGGGAAGTACACAGAAGTCTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| 3UTR-3UTR TCA 90 bp | GGAGTGCTAACAGAGGCTAAAGAATCACAGAAGGAGCAAGCTTCAGCCAGAGACATCCCAAAGCATACTTaGGTAATGAAGACTAAAGCA | + |
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Preference number: 2 (lower is better) Translates to: GVLTEAKESQKEQASARDIPKHT*VMKTKA Trigger: TGCTTTAGTCTTCATTACTCAAGTATGCTTTGGGAT...GTCTCTGGCTGAAGCTTGCTCCTTCTGTGATTCTTTAGCCTCTGTTAGCACTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| 3UTR-3UTR TCA 90 bp | GAAGTGAGCATCAGCAACAGAATACAAGAAATGGAAGAGAGAATCTCAGGTGCAGCTTCAGGCCCCAAATaGAAATCTGTACAGCATCTA | + |
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Preference number: 2 (lower is better) Translates to: EVSISNRIQEMEERISGAASGPK*KSVQHL Trigger: TAGATGCTGTACAGATTTTCATTTGGGGCCTGAAGC...TGCACCTGAGATTCTCTCTTCCATTTCTTGTATTCTGTTGCTGATGCTCACTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| 3UTR-3UTR GCA 90 bp | GGAGTGCTAACAGAGGCTAAAGAATCACAGAAGGAGCAAGCTTCAGCCAGAGACCAAGAGAGTGTCTACTaGTATATCAAACCATATATG | + |
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Preference number: 2 (lower is better) Translates to: GVLTEAKESQKEQASARDQESVY*YIKPYM Trigger: CATATATGGTTTGATATAGCAGTAGACACTCTCTTG...GTCTCTGGCTGAAGCTTGCTCCTTCTGTGATTCTTTAGCCTCTGTTAGCACTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| 3UTR-3UTR TCA 90 bp | GCAAACATAAGAATCTTACTAACAGAAACCAAGACCACTGGGCATCATCAGAACACATCATCATGGTCATaGAGCACAGATCTGTCCCAA | + |
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Preference number: 2 (lower is better) Translates to: ANIRILLTETKTTGHHQNTSSWS*STDLSQ Trigger: TTGGGACAGATCTGTGCTTCATGACCATGATGATGT...GTTCTGATGATGCCCAGTGGTCTTGGTTTCTGTTAGTAAGATTCTTATGTTTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| 3UTR-3UTR GCA 90 bp | CTAGCTTTTACAAGACCAAGGATCTCTCCTCTCATAAATCCAACGTTTATATTATTTGCACCAGCTCCATaGCATCTTGGGTGTGAACCC | + |
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Preference number: 2 (lower is better) Translates to: LAFTRPRISPLINPTFILFAPAP*HLGCEP Trigger: GGGTTCACACCCAAGATGGCATGGAGCTGGTGCAAA...TAATATAAACGTTGGATTTATGAGAGGAGAGATCCTTGGTCTTGTAAAAGCTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| 3UTR-3UTR GCA 90 bp | CTAGCTTTTACAAGACCAAGGATCTCTCCTCTCATAAATCCAACGTTTATATTATGCTGCAGGTACCCTTaGACACCCAGGATCTTAAGA | + |
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Preference number: 2 (lower is better) Translates to: LAFTRPRISPLINPTFILCCRYP*TPRILR Trigger: TCTTAAGATCCTGGGTGTGCAAGGGTACCTGCAGCA...TAATATAAACGTTGGATTTATGAGAGGAGAGATCCTTGGTCTTGTAAAAGCTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| 3UTR-3UTR TCA 90 bp | AAAGAAATCAGGAACCATAGAAGTGAGCATCAGCAACAGAATACAAGAAATGGACTAAGGCAGACACTGTaGTCAATATCATGGGATTGG | + |
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Preference number: 2 (lower is better) Translates to: KEIRNHRSEHQQQNTRNGLRQTL*SISWDW Trigger: CCAATCCCATGATATTGATCACAGTGTCTGCCTTAG...TCCATTTCTTGTATTCTGTTGCTGATGCTCACTTCTATGGTTCCTGATTTCTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| 3UTR-3UTR CCA 90 bp | AAAGAAATCAGGAACCATAGAAGTGAGCATCAGCAACAGAATACAAGAAATGGATATTGTAAAGTGTGGTaGATCTGGGAAGAGTTGGCA | + |
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Preference number: 2 (lower is better) Translates to: KEIRNHRSEHQQQNTRNGYCKVW*IWEELA Trigger: TGCCAACTCTTCCCAGATCCACCACACTTTACAATA...TCCATTTCTTGTATTCTGTTGCTGATGCTCACTTCTATGGTTCCTGATTTCTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| 3UTR-3UTR CCA 90 bp | CTAGCTTTTACAAGACCAAGGATCTCTCCTCTCATAAATCCAACGTTTATATTACCCTGCTACACTTCATaGTCACATACTTTGAGTGAA | + |
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Preference number: 2 (lower is better) Translates to: LAFTRPRISPLINPTFILPCYTS*SHTLSE Trigger: TTCACTCAAAGTATGTGACCATGAAGTGTAGCAGGG...TAATATAAACGTTGGATTTATGAGAGGAGAGATCCTTGGTCTTGTAAAAGCTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| 3UTR-3UTR CCA 90 bp | CTAGCTTTTACAAGACCAAGGATCTCTCCTCTCATAAATCCAACGTTTATATTACTCTTTATTGTCACTTaGGAATCACCCTACCAGTGT | + |
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Preference number: 2 (lower is better) Translates to: LAFTRPRISPLINPTFILLFIVT*ESPYQC Trigger: ACACTGGTAGGGTGATTCCCAAGTGACAATAAAGAG...TAATATAAACGTTGGATTTATGAGAGGAGAGATCCTTGGTCTTGTAAAAGCTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| 3UTR-3UTR TCA 90 bp | CTAGCTTTTACAAGACCAAGGATCTCTCCTCTCATAAATCCAACGTTTATATTACTCTTATTAGTTCTGTaGCTCTTTAAAACAGGGACT | + |
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Preference number: 2 (lower is better) Translates to: LAFTRPRISPLINPTFILLLLVL*LFKTGT Trigger: AGTCCCTGTTTTAAAGAGTCACAGAACTAATAAGAG...TAATATAAACGTTGGATTTATGAGAGGAGAGATCCTTGGTCTTGTAAAAGCTAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| 3UTR-3UTR CAA 90 bp | GCCTCCAGAGAGGGCTCTGACCCCAGGACTCAGGTGAGGGTGCCATCATGTATCAAGCAACAGAGCTTTTaGGCCTTCCTCTTCACCCAG | + |
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Preference number: 3 (lower is better) Translates to: ASREGSDPRTQVRVPSCIKQQSF*AFLFTQ Trigger: CTGGGTGAAGAGGAAGGCCAAAAAGCTCTGTTGCTT...GATACATGATGGCACCCTCACCTGAGTCCTGGGGTCAGAGCCCTCTCTGGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| 3UTR TCA 72 bp | TTCTTTCTTTGCACCAGCTCCATGCCATCTTGGGTGTaGACCCCATGGACGGTCCCAAGGTCCCCAGAGGAC | + |
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Preference number: 3 (lower is better) Translates to: FFLCTSSMPSWV*TPWTVPRSPED Trigger: GTCCTCTGGGGACCTTGGGACCGTCCATGGGGTTCACACCCAAGATGGCATGGAGCTGGTGCAAAGAAAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| 3UTR GCA 72 bp | GACTTCTGTGTACTTCCCTGCAAGAGGAGAGCTGGCTaGAGAGAGTGCTCTAACCACTGGGACTCAGGAGGG | + |
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Preference number: 3 (lower is better) Translates to: DFCVLPCKRRAG*RECSNHWDSGG Trigger: CCCTCCTGAGTCCCAGTGGTTAGAGCACTCTCTGCAGCCAGCTCTCCTCTTGCAGGGAAGTACACAGAAGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| 3UTR GCA 72 bp | GTCCCAAGGTCCCCAGAGGACTCTCCACACCGCAGGTaGCCTAGCACACTCAGTATCTTAGGATCACTGAAG | + |
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Preference number: 3 (lower is better) Translates to: VPRSPEDSPHRR*PSTLSILGSLK Trigger: CTTCAGTGATCCTAAGATACTGAGTGTGCTAGGGCACCTGCGGTGTGGAGAGTCCTCTGGGGACCTTGGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| 3UTR GCA 72 bp | TGGTGGATGGTCCCAAGATCCCCAGAGGACGCTCCATaGTGCAGGTACCCTTGCACACCCAGGATCTTAAGA | + |
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Preference number: 3 (lower is better) Translates to: WWMVPRSPEDAP*CRYPCTPRILR Trigger: TCTTAAGATCCTGGGTGTGCAAGGGTACCTGCAGCATGGAGCGTCCTCTGGGGATCTTGGGACCATCCACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| 3UTR CCA 72 bp | GGAGTCACGCACTATCTTGGGCACAAACTTGGTGGATaGTCCCAAGATCCCCAGAGGACGCTCCATGCTGCA | + |
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Preference number: 3 (lower is better) Translates to: GVTHYLGHKLGG*SQDPQRTLHAA Trigger: TGCAGCATGGAGCGTCCTCTGGGGATCTTGGGACCATCCACCAAGTTTGTGCCCAAGATAGTGCGTGACTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| 3UTR TCA 72 bp | GGATCACTGAAGAGAGTTAGCCTCCAGAGAGGGCTCTaGCCCCAGGACTCAGGTGAGGGTGCCATCATGTAT | + |
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Preference number: 3 (lower is better) Translates to: GSLKRVSLQRGL*PQDSGEGAIMY Trigger: ATACATGATGGCACCCTCACCTGAGTCCTGGGGTCAGAGCCCTCTCTGGAGGCTAACTCTCTTCAGTGATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| 3UTR GCA 72 bp | TGGATGGTCCCAAGATCCCCAGAGGACGCTCCATGCTaGAGGTACCCTTGCACACCCAGGATCTTAAGATCA | + |
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Preference number: 3 (lower is better) Translates to: WMVPRSPEDAPC*RYPCTPRILRS Trigger: TGATCTTAAGATCCTGGGTGTGCAAGGGTACCTGCAGCATGGAGCGTCCTCTGGGGATCTTGGGACCATCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| 3UTR-3UTR CAA 90 bp | TCTTGGGCACAAACTTGGTGGATGGTCCCAAGATCCCCAGAGGACGCTCCATGCAATGGGGTTCTTTCTTaGCACCAGCTCCATGCCATC | + |
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Preference number: 3 (lower is better) Translates to: SWAQTWWMVPRSPEDAPCNGVLS*HQLHAI Trigger: GATGGCATGGAGCTGGTGCAAAGAAAGAACCCCATT...GCATGGAGCGTCCTCTGGGGATCTTGGGACCATCCACCAAGTTTGTGCCCAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| 3UTR GCA 72 bp | ACCAGCAAATGGGGTTCTTTCTTTGCACCAGCTCCATaGCATCTTGGGTGTGAACCCCATGGACGGTCCCAA | + |
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Preference number: 3 (lower is better) Translates to: TSKWGSFFAPAP*HLGCEPHGRSQ Trigger: TTGGGACCGTCCATGGGGTTCACACCCAAGATGGCATGGAGCTGGTGCAAAGAAAGAACCCCATTTGCTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| 3UTR GCA 72 bp | AGATCCCCAGAGGACGCTCCATGCTGCAGGTACCCTTaGACACCCAGGATCTTAAGATCACTAGTGAGTGGA | + |
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Preference number: 3 (lower is better) Translates to: RSPEDAPCCRYP*TPRILRSLVSG Trigger: TCCACTCACTAGTGATCTTAAGATCCTGGGTGTGCAAGGGTACCTGCAGCATGGAGCGTCCTCTGGGGATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| 3UTR CCA 72 bp | ATATGGAGTCACGCACTATCTTGGGCACAAACTTGGTaGATGGTCCCAAGATCCCCAGAGGACGCTCCATGC | + |
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Preference number: 3 (lower is better) Translates to: IWSHALSWAQTW*MVPRSPEDAPC Trigger: GCATGGAGCGTCCTCTGGGGATCTTGGGACCATCCACCAAGTTTGTGCCCAAGATAGTGCGTGACTCCATAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| 3UTR CCA 72 bp | TCCATATGGAGTCACGCACTATCTTGGGCACAAACTTaGTGGATGGTCCCAAGATCCCCAGAGGACGCTCCA | + |
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Preference number: 3 (lower is better) Translates to: SIWSHALSWAQT*WMVPRSPEDAP Trigger: TGGAGCGTCCTCTGGGGATCTTGGGACCATCCACCAAGTTTGTGCCCAAGATAGTGCGTGACTCCATATGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| 3UTR GCA 72 bp | TCTAAGAGACCAGTCTGTGCAGGAGAGCACGTGGGCTaGAGAAGCAACAGAGCTTTTTGGCCTTCCTCTTCA | + |
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Preference number: 3 (lower is better) Translates to: SKRPVCAGEHVG*RSNRAFWPSSS Trigger: TGAAGAGGAAGGCCAAAAAGCTCTGTTGCTTCTGCAGCCCACGTGCTCTCCTGCACAGACTGGTCTCTTAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| 3UTR-3UTR CAA 90 bp | TCCAGACTTCTGTGTACTTCCCTGCAAGAGGAGAGCTGGCTGCAGAGAGTGCTCTCTCTTTATTGTCACTaGGGAATCACCCTACCAGTG | + |
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Preference number: 3 (lower is better) Translates to: SRLLCTSLQEESWLQRVLSLYCH*GITLPV Trigger: CACTGGTAGGGTGATTCCCAAGTGACAATAAAGAGA...GAGCACTCTCTGCAGCCAGCTCTCCTCTTGCAGGGAAGTACACAGAAGTCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| 3UTR-3UTR CAA 90 bp | GGAGTGCTAACAGAGGCTAAAGAATCACAGAAGGAGCAAGCTTCAGCCAGAGACATATGTAAGTCTGGTTaGGCCACAGTGACACAGAGA | + |
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Preference number: 3 (lower is better) Translates to: GVLTEAKESQKEQASARDICKSG*ATVTQR Trigger: TCTCTGTGTCACTGTGGCCAAACCAGACTTACATAT...GTCTCTGGCTGAAGCTTGCTCCTTCTGTGATTCTTTAGCCTCTGTTAGCACTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| 3UTR-3UTR CAA 90 bp | ACCTGGAGGTTCTTGTGCCAGCAGGATCAGGGGACAAATGAAACCCAACCAACCACTATGAAGCCAGGTTaGCTTTTTCTACTTTTAGTC | + |
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Preference number: 3 (lower is better) Translates to: TWRFLCQQDQGTNETQPTTMKPG*LFLLLV Trigger: GACTAAAAGTAGAAAAAGCAAACCTGGCTTCATAGT...GGTTGGTTGGGTTTCATTTGTCCCCTGATCCTGCTGGCACAAGAACCTCCAGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| 3UTR CCA 72 bp | CCCTTGCACACCCAGGATCTTAAGATCACTAGTGAGTaGAACACAACATCTGTTCCAAAACAACCTGGAGGT | + |
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Preference number: 3 (lower is better) Translates to: PLHTQDLKITSE*NTTSVPKQPGG Trigger: ACCTCCAGGTTGTTTTGGAACAGATGTTGTGTTCCACTCACTAGTGATCTTAAGATCCTGGGTGTGCAAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| 3UTR CCA 72 bp | GTTATAAAAACTTCCATATGGAGTCACGCACTATCTTaGGCACAAACTTGGTGGATGGTCCCAAGATCCCCA | + |
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Preference number: 3 (lower is better) Translates to: VIKTSIWSHALS*AQTWWMVPRSP Trigger: TGGGGATCTTGGGACCATCCACCAAGTTTGTGCCCAAGATAGTGCGTGACTCCATATGGAAGTTTTTATAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| 3UTR CCA 72 bp | AAACATAAGAATCTTACTAACAGAAACCAAGACCACTaGGCATCATCAGAACCCAGTATGTCCACCACAGTG | + |
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Preference number: 3 (lower is better) Translates to: KHKNLTNRNQDH*ASSEPSMSTTV Trigger: CACTGTGGTGGACATACTGGGTTCTGATGATGCCCAGTGGTCTTGGTTTCTGTTAGTAAGATTCTTATGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| 3UTR TCA 72 bp | ATAACCAACCTAAAACTGCTAGCTTCAGGCCCCAAATaGAAATCTGTACAGCATCTAACTATGAAGCCAGGT | + |
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Preference number: 3 (lower is better) Translates to: ITNLKLLASGPK*KSVQHLTMKPG Trigger: ACCTGGCTTCATAGTTAGATGCTGTACAGATTTTCATTTGGGGCCTGAAGCTAGCAGTTTTAGGTTGGTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| 3UTR TCA 72 bp | AAAGAAAAGATGGTAATATTCACATCATCATGGTCATaGAGCACAGATCTGTCCCAAACCCTGTTCTCTCAA | + |
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Preference number: 3 (lower is better) Translates to: KEKMVIFTSSWS*STDLSQTLFSQ Trigger: TTGAGAGAACAGGGTTTGGGACAGATCTGTGCTTCATGACCATGATGATGTGAATATTACCATCTTTTCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| 3UTR TCA 72 bp | GAAATTCCACAGGCTGAACCATATGGCTATAATTTCTaGATGATTAATTTGGAAGAGTCTGTGATCAGGCAT | + |
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Preference number: 3 (lower is better) Translates to: EIPQAEPYGYNF*MINLEESVIRH Trigger: ATGCCTGATCACAGACTCTTCCAAATTAATCATTCAGAAATTATAGCCATATGGTTCAGCCTGTGGAATTTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| 3UTR CAA 72 bp | AATGGGGTTCTTTCTTTGCACCAGCTCCATGCCATCTaGGGTGTGAACCCCATGGACGGTCCCAAGGTCCCC | + |
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Preference number: 4 (lower is better) Translates to: NGVLSLHQLHAI*GVNPMDGPKVP Trigger: GGGGACCTTGGGACCGTCCATGGGGTTCACACCCAAGATGGCATGGAGCTGGTGCAAAGAAAGAACCCCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| 3UTR CAA 72 bp | AGGAGAGCACGTGGGCTGCAGAAGCAACAGAGCTTTTaGGCCTTCCTCTTCACCCAGGAAGTGGATCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: RRARGLQKQQSF*AFLFTQEVDLS Trigger: GCTCAGATCCACTTCCTGGGTGAAGAGGAAGGCCAAAAAGCTCTGTTGCTTCTGCAGCCCACGTGCTCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| 3UTR CAA 72 bp | AAGATCCCCAGAGGACGCTCCATGCTGCAGGTACCCTaGCACACCCAGGATCTTAAGATCACTAGTGAGTGG | + |
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Preference number: 4 (lower is better) Translates to: KIPRGRSMLQVP*HTQDLKITSEW Trigger: CCACTCACTAGTGATCTTAAGATCCTGGGTGTGCAAGGGTACCTGCAGCATGGAGCGTCCTCTGGGGATCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| 3UTR CAA 72 bp | TTCCATATGGAGTCACGCACTATCTTGGGCACAAACTaGGTGGATGGTCCCAAGATCCCCAGAGGACGCTCC | + |
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Preference number: 4 (lower is better) Translates to: FHMESRTILGTN*VDGPKIPRGRS Trigger: GGAGCGTCCTCTGGGGATCTTGGGACCATCCACCAAGTTTGTGCCCAAGATAGTGCGTGACTCCATATGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| 3UTR CAA 72 bp | ATGAAACCCAACCAACCAGCAAATGGGGTTCTTTCTTaGCACCAGCTCCATGCCATCTTGGGTGTGAACCCC | + |
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Preference number: 4 (lower is better) Translates to: MKPNQPANGVLS*HQLHAILGVNP Trigger: GGGGTTCACACCCAAGATGGCATGGAGCTGGTGCAAAGAAAGAACCCCATTTGCTGGTTGGTTGGGTTTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| CDS-3UTR GCA 90 bp | TCCAGACTTCTGTGTACTTCCCTGCAAGAGGAGAGCTGGCTGCAGAGAGTGCTCAGTTCCACCCAAGAATaGTCCAAATGCCAACTGAAT | + |
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Preference number: 4 (lower is better) Translates to: SRLLCTSLQEESWLQRVLSSTQE*SKCQLN Trigger: ATTCAGTTGGCATTTGGAGCATTCTTGGGTGGAACT...GAGCACTCTCTGCAGCCAGCTCTCCTCTTGCAGGGAAGTACACAGAAGTCTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| CDS-3UTR TCA 90 bp | TCCAGACTTCTGTGTACTTCCCTGCAAGAGGAGAGCTGGCTGCAGAGAGTGCTCTACTTTGGAGCAGAATaGCAACTGGAAAGTATTAGT | + |
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Preference number: 4 (lower is better) Translates to: SRLLCTSLQEESWLQRVLYFGAE*QLESIS Trigger: ACTAATACTTTCCAGTTGTCATTCTGCTCCAAAGTA...GAGCACTCTCTGCAGCCAGCTCTCCTCTTGCAGGGAAGTACACAGAAGTCTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| 3UTR CAA 72 bp | GAACACAACATCTGTTCCAAAACAACCTGGAGGTTCTaGTGCCAGCAGGATCAGGGGACAAATGAAACCCAA | + |
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Preference number: 4 (lower is better) Translates to: EHNICSKTTWRF*CQQDQGTNETQ Trigger: TTGGGTTTCATTTGTCCCCTGATCCTGCTGGCACAAGAACCTCCAGGTTGTTTTGGAACAGATGTTGTGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| CDS-3UTR GCA 90 bp | GGAGTGCTAACAGAGGCTAAAGAATCACAGAAGGAGCAAGCTTCAGCCAGAGACCAAGAATGCTCCAAATaGCAACTGAATACAGACTCT | + |
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Preference number: 4 (lower is better) Translates to: GVLTEAKESQKEQASARDQECSK*QLNTDS Trigger: AGAGTCTGTATTCAGTTGGCATTTGGAGCATTCTTG...GTCTCTGGCTGAAGCTTGCTCCTTCTGTGATTCTTTAGCCTCTGTTAGCACTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| CDS-3UTR TCA 90 bp | GCAAACATAAGAATCTTACTAACAGAAACCAAGACCACTGGGCATCATCAGAACGTGATTACGGCCAGGTaGGAAGCACAAGTAGAGAAC | + |
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Preference number: 4 (lower is better) Translates to: ANIRILLTETKTTGHHQNVITAR*EAQVEN Trigger: GTTCTCTACTTGTGCTTCTCACCTGGCCGTAATCAC...GTTCTGATGATGCCCAGTGGTCTTGGTTTCTGTTAGTAAGATTCTTATGTTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| CDS-3UTR TCA 90 bp | GAAGTGAGCATCAGCAACAGAATACAAGAAATGGAAGAGAGAATCTCAGGTGCAAGTAACATGCATCTATaGAGGATAACATACAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: EVSISNRIQEMEERISGASNMHL*RITYRG Trigger: TCCTCTGTATGTTATCCTTCATAGATGCATGTTACT...TGCACCTGAGATTCTCTCTTCCATTTCTTGTATTCTGTTGCTGATGCTCACTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| CDS-3UTR TCA 90 bp | GCAAACATAAGAATCTTACTAACAGAAACCAAGACCACTGGGCATCATCAGAACTTTGTCAATATTCATTaGATGTCCTGTACTAGGACG | + |
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Preference number: 4 (lower is better) Translates to: ANIRILLTETKTTGHHQNFVNIH*MSCTRT Trigger: CGTCCTAGTACAGGACATTCAATGAATATTGACAAA...GTTCTGATGATGCCCAGTGGTCTTGGTTTCTGTTAGTAAGATTCTTATGTTTGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| 3UTR CAA 72 bp | AGAATTTCATTTGAAGGTTCAGGTTTAAACGAGAATTaGATGTATACCCAAGTCTACTCATTTTCCCATGCT | + |
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Preference number: 4 (lower is better) Translates to: RISFEGSGLNEN*MYTQVYSFSHA Trigger: AGCATGGGAAAATGAGTAGACTTGGGTATACATCAAATTCTCGTTTAAACCTGAACCTTCAAATGAAATTCT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215457.2 |
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| CDS GCA 90 bp | ATAGGAGAGGAGAACAGTAAGAAGAGAGAGAGCTTCCACCAAACTTaGAAACACCACCAATATTATGTCATGTGTGTAGGTATCAAAGCA | + |
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Preference number: 5 (lower is better) Translates to: IGEENSKKRESFHQT*KHHQYYVMCVGIKA Trigger: TGCTTTGATACCTACACACATGACATAATATTGGTGGTGTTTGCAAGTTTGGTGGAAGCTCTCTCTCTTCTTACTGTTCTCCTCTCCTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099839.4 ENSMUST00000215457.2 |
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