Pregenerated sensors for OLFR1155 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075145Ensembl transcript IDs: ENSMUST00000214641.2, ENSMUST00000215903.2
Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TGGGGTCATGAAAAGTTGAAACCATCTTTCCCTATCTACCATTTACTTCTCTACCACAGAATTATTCTGTaGACAAAACTACACTGCACA | + |
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Preference number: 2 (lower is better) Translates to: WGHEKLKPSFPIYHLLLYHRIIL*TKLHCT Trigger: TGTGCAGTGTAGTTTTGTTCACAGAATAATTCTGTG...GTAGAGAAGTAAATGGTAGATAGGGAAAGATGGTTTCAACTTTTCATGACCCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000214641.2 ENSMUST00000215903.2 |
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| 3UTR-3UTR CCA 90 bp | TGGGGTCATGAAAAGTTGAAACCATCTTTCCCTATCTACCATTTACTTCTCTACTTTGGCATTGTAAGTTaGAGTCACATGCTTATAATG | + |
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Preference number: 2 (lower is better) Translates to: WGHEKLKPSFPIYHLLLYFGIVS*SHMLIM Trigger: CATTATAAGCATGTGACTCCAACTTACAATGCCAAA...GTAGAGAAGTAAATGGTAGATAGGGAAAGATGGTTTCAACTTTTCATGACCCCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214641.2 ENSMUST00000215903.2 |
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| 3UTR TCA 72 bp | TCTACCATTTACTTCTCTACATTCACAGTGTGGAGATaGGACTGTTTTAGCATTCCAGTATTATTTGTCACA | + |
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Preference number: 3 (lower is better) Translates to: STIYFSTFTVWR*DCFSIPVLFVT Trigger: TGTGACAAATAATACTGGAATGCTAAAACAGTCTCATCTCCACACTGTGAATGTAGAGAAGTAAATGGTAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214641.2 ENSMUST00000215903.2 |
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| CDS-3UTR TCA 90 bp | TTCCCTATCTACCATTTACTTCTCTACATTCACAGTGTGGAGATGAGACTGTTTTTAGGGCAGAACAGGTaGGTGTCAGGGAGCACACCA | + |
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Preference number: 4 (lower is better) Translates to: FPIYHLLLYIHSVEMRLFLGQNR*VSGSTP Trigger: TGGTGTGCTCCCTGACACTCACCTGTTCTGCCCTAA...AAACAGTCTCATCTCCACACTGTGAATGTAGAGAAGTAAATGGTAGATAGGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214641.2 ENSMUST00000215903.2 |
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| CDS-3UTR TCA 90 bp | TGGGGTCATGAAAAGTTGAAACCATCTTTCCCTATCTACCATTTACTTCTCTACAGAGCCTCTGTGACATaGCTACTGTGTACAGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: WGHEKLKPSFPIYHLLLYRASVT*LLCTAG Trigger: CCCTGCTGTACACAGTAGTCATGTCACAGAGGCTCT...GTAGAGAAGTAAATGGTAGATAGGGAAAGATGGTTTCAACTTTTCATGACCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214641.2 ENSMUST00000215903.2 |
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| CDS-3UTR TCA 90 bp | AGCATTTATTCCTATGTCCCAAATGCATTTGGAATTAATTCTCACCAGATGCATAGAGCCTCTGTGACATaGCTACTGTGTACAGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SIYSYVPNAFGINSHQMHRASVT*LLCTAG Trigger: CCCTGCTGTACACAGTAGTCATGTCACAGAGGCTCT...ATGCATCTGGTGAGAATTAATTCCAAATGCATTTGGGACATAGGAATAAATGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214641.2 ENSMUST00000215903.2 |
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| CDS-3UTR TCA 90 bp | TTCCCTATCTACCATTTACTTCTCTACATTCACAGTGTGGAGATGAGACTGTTTAGTAACTGGGTAAGATaGGAATCAGAGCAAGAGAGG | + |
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Preference number: 4 (lower is better) Translates to: FPIYHLLLYIHSVEMRLFSNWVR*ESEQER Trigger: CCTCTCTTGCTCTGATTCTCATCTTACCCAGTTACT...AAACAGTCTCATCTCCACACTGTGAATGTAGAGAAGTAAATGGTAGATAGGGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214641.2 ENSMUST00000215903.2 |
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| CDS-3UTR TCA 90 bp | TGGGGTCATGAAAAGTTGAAACCATCTTTCCCTATCTACCATTTACTTCTCTACCCAAGAGAGCGAATGTaGCCTCAGAAGTTAGATTTA | + |
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Preference number: 4 (lower is better) Translates to: WGHEKLKPSFPIYHLLLYPRERM*PQKLDL Trigger: TAAATCTAACTTCTGAGGTCACATTCGCTCTCTTGG...GTAGAGAAGTAAATGGTAGATAGGGAAAGATGGTTTCAACTTTTCATGACCCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214641.2 ENSMUST00000215903.2 |
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| CDS-3UTR TCA 90 bp | AGCATTTATTCCTATGTCCCAAATGCATTTGGAATTAATTCTCACCAGATGCATAGTAACTGGGTAAGATaGGAATCAGAGCAAGAGAGG | + |
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Preference number: 4 (lower is better) Translates to: SIYSYVPNAFGINSHQMHSNWVR*ESEQER Trigger: CCTCTCTTGCTCTGATTCTCATCTTACCCAGTTACT...ATGCATCTGGTGAGAATTAATTCCAAATGCATTTGGGACATAGGAATAAATGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214641.2 ENSMUST00000215903.2 |
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| CDS-3UTR GCA 90 bp | TGGGGTCATGAAAAGTTGAAACCATCTTTCCCTATCTACCATTTACTTCTCTACACTGAAGCTGTAGATTaGCAGAAACAACAAGAAGAG | + |
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Preference number: 4 (lower is better) Translates to: WGHEKLKPSFPIYHLLLYTEAVD*QKQQEE Trigger: CTCTTCTTGTTGTTTCTGGCAATCTACAGCTTCAGT...GTAGAGAAGTAAATGGTAGATAGGGAAAGATGGTTTCAACTTTTCATGACCCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214641.2 ENSMUST00000215903.2 |
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| CDS-3UTR TCA 90 bp | AGCATTTATTCCTATGTCCCAAATGCATTTGGAATTAATTCTCACCAGATGCATCCAAGAGAGCGAATGTaGCCTCAGAAGTTAGATTTA | + |
|
Preference number: 4 (lower is better) Translates to: SIYSYVPNAFGINSHQMHPRERM*PQKLDL Trigger: TAAATCTAACTTCTGAGGTCACATTCGCTCTCTTGG...ATGCATCTGGTGAGAATTAATTCCAAATGCATTTGGGACATAGGAATAAATGCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214641.2 ENSMUST00000215903.2 |
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| CDS-3UTR GCA 90 bp | AGCATTTATTCCTATGTCCCAAATGCATTTGGAATTAATTCTCACCAGATGCATACTGAAGCTGTAGATTaGCAGAAACAACAAGAAGAG | + |
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Preference number: 4 (lower is better) Translates to: SIYSYVPNAFGINSHQMHTEAVD*QKQQEE Trigger: CTCTTCTTGTTGTTTCTGGCAATCTACAGCTTCAGT...ATGCATCTGGTGAGAATTAATTCCAAATGCATTTGGGACATAGGAATAAATGCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214641.2 ENSMUST00000215903.2 |
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