Pregenerated sensors for OLFR1152 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045225Ensembl transcript IDs: ENSMUST00000051058.3, ENSMUST00000213308.3
Found 117 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCTTTACTCTGAGAGAACCAGCAGGCCCCAGTGTTGGATGGTCCTaGCCAACAAACAAAGAAGCCTCTGCCTCTTCCCAGTCAGGAACT | + |
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Preference number: 1 (lower is better) Translates to: PFTLREPAGPSVGWS*PTNKEASASSQSGT Trigger: AGTTCCTGACTGGGAAGAGGCAGAGGCTTCTTTGTTTGTTGGTCAGGACCATCCAACACTGGGGCCTGCTGGTTCTCTCAGAGTAAAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
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| 3UTR TCA 90 bp | CATCCAAAACAGTATCTTCCTCGGACAGCACAGCACCCTTTACTCTaGGAGAACCAGCAGGCCCCAGTGTTGGATGGTCCTGACCAACAA | + |
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Preference number: 1 (lower is better) Translates to: HPKQYLPRTAQHPLL*ENQQAPVLDGPDQQ Trigger: TTGTTGGTCAGGACCATCCAACACTGGGGCCTGCTGGTTCTCTCAGAGTAAAGGGTGCTGTGCTGTCCGAGGAAGATACTGTTTTGGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
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| 3UTR CCA 90 bp | CACTTCTTAATGATGCAGGGTCTCAAGTCGCAATGGATGCGGAAATaGACAATGAGGTTGCCCTTGTGGCTGAATCGTTGCCCACAATCC | + |
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Preference number: 1 (lower is better) Translates to: HFLMMQGLKSQWMRK*TMRLPLWLNRCPQS Trigger: GGATTGTGGGCAACGATTCAGCCACAAGGGCAACCTCATTGTCCATTTCCGCATCCATTGCGACTTGAGACCCTGCATCATTAAGAAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
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| 3UTR TCA 90 bp | TCAGGTCAGAGGACTGTAGAAAGGCCTTGCTGCACAAGTTGCACTTaGAGGGTCTCTCTTCTGTGTGTAAACTCTGACGGAGGTCAAAGT | + |
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Preference number: 1 (lower is better) Translates to: SGQRTVERPCCTSCT*RVSLLCVNSDGGQS Trigger: ACTTTGACCTCCGTCAGAGTTTACACACAGAAGAGAGACCCTTCAAGTGCAACTTGTGCAGCAAGGCCTTTCTACAGTCCTCTGACCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
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| 3UTR CCA 90 bp | GGTCCCTGGACGATATTTGTTAGTTTTCCAGTGACTTCACCTGCTTaGGAGAGCGCCTTCCAGGCCCTAATAGCCTTTTCATCTGATTCA | + |
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Preference number: 1 (lower is better) Translates to: GPWTIFVSFPVTSPA*ESAFQALIAFSSDS Trigger: TGAATCAGATGAAAAGGCTATTAGGGCCTGGAAGGCGCTCTCCCAAGCAGGTGAAGTCACTGGAAAACTAACAAATATCGTCCAGGGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
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| 3UTR TCA 90 bp | AGAAGTTCTGTAGCTCCCGGCTGTCCTCTGTTGGGACAAATCCTATaGTCCCATTTATACTCTGCAGCTTCATCCTTCACAAAGCTGGGA | + |
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Preference number: 1 (lower is better) Translates to: RSSVAPGCPLLGQIL*SHLYSAASSFTKLG Trigger: TCCCAGCTTTGTGAAGGATGAAGCTGCAGAGTATAAATGGGATCATAGGATTTGTCCCAACAGAGGACAGCCGGGAGCTACAGAACTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
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| 3UTR TCA 90 bp | GGCTTGCTCATAAATAAGCTATTCTACCAGAGGTGTGGCTTGCTCTaGATCTCCAAAAATACGCTCTGCTGCCTCTGTCATTCTGGCCAC | + |
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Preference number: 1 (lower is better) Translates to: GLLINKLFYQRCGLL*ISKNTLCCLCHSGH Trigger: GTGGCCAGAATGACAGAGGCAGCAGAGCGTATTTTTGGAGATTCAGAGCAAGCCACACCTCTGGTAGAATAGCTTATTTATGAGCAAGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
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| 3UTR CCA 90 bp | GGCTGTCTCCTCTCAGTAATTACTCCCAGAAAAATGTCCTCTTCCTaGTTAGTGGATGGCTCTTCAGTCTCTGAGAAGTTCTGTAGCTCC | + |
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Preference number: 1 (lower is better) Translates to: GCLLSVITPRKMSSS*LVDGSSVSEKFCSS Trigger: GGAGCTACAGAACTTCTCAGAGACTGAAGAGCCATCCACTAACCAGGAAGAGGACATTTTTCTGGGAGTAATTACTGAGAGGAGACAGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
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| 3UTR CCA 90 bp | AAAGCCATGCTACACTTCTTAATGATGCAGGGTCTCAAGTCGCAATaGATGCGGAAATGGACAATGAGGTTGCCCTTGTGGCTGAATCGT | + |
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Preference number: 1 (lower is better) Translates to: KAMLHFLMMQGLKSQ*MRKWTMRLPLWLNR Trigger: ACGATTCAGCCACAAGGGCAACCTCATTGTCCATTTCCGCATCCATTGCGACTTGAGACCCTGCATCATTAAGAAGTGTAGCATGGCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
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| 3UTR GCA 90 bp | AACTCTGACGGAGGTCAAAGTGAGACCTGTAAAGAAAGCTCTTCTTaGATTCAGTACACTGAAACCGAGTCTGGCCAGCAAGACTGTCAA | + |
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Preference number: 1 (lower is better) Translates to: NSDGGQSETCKESSS*IQYTETESGQQDCQ Trigger: TTGACAGTCTTGCTGGCCAGACTCGGTTTCAGTGTACTGAATGCAAGAAGAGCTTTCTTTACAGGTCTCACTTTGACCTCCGTCAGAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
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| 3UTR CCA 90 bp | GGGCGGCTCCCCACACAAGACAACCTATACCTGACAATGCCAGTATaGCTAAGTATCTTAGACTATATAGGTCATGGGCTTAAGGAAATG | + |
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Preference number: 1 (lower is better) Translates to: GRLPTQDNLYLTMPV*LSILDYIGHGLKEM Trigger: CATTTCCTTAAGCCCATGACCTATATAGTCTAAGATACTTAGCCATACTGGCATTGTCAGGTATAGGTTGTCTTGTGTGGGGAGCCGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
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| 3UTR TCA 90 bp | AGAGATGCTCCTTGGGTCTGGGATCCTGTGACCCTTCCAAGGAACTaGAACCTCAGAACTTCATGTGCCAAAAATCAGGGTTATAGTTTT | + |
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Preference number: 1 (lower is better) Translates to: RDAPWVWDPVTLPRN*NLRTSCAKNQGYSF Trigger: AAAACTATAACCCTGATTTTTGGCACATGAAGTTCTGAGGTTTCAGTTCCTTGGAAGGGTCACAGGATCCCAGACCCAAGGAGCATCTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
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| 3UTR GCA 90 bp | AGGAAGAACGCAACAAACCAGAATCTTCTGCGGCAAAAGCTTTATTaGTTACATCTTCAGGAGCCAGAGAGCAAGAGTGCAAGAGAGAGA | + |
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Preference number: 1 (lower is better) Translates to: RKNATNQNLLRQKLY*LHLQEPESKSARER Trigger: TCTCTCTCTTGCACTCTTGCTCTCTGGCTCCTGAAGATGTAAGCAATAAAGCTTTTGCCGCAGAAGATTCTGGTTTGTTGCGTTCTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
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| 3UTR TCA 90 bp | TATATCTGTGGTGAATATTCCTATTGGTCTAGGAAAAGTCTGAAGTaGCTCCTGTATAAACCAGCCTACACATTTTGCCACACAGATAGG | + |
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Preference number: 1 (lower is better) Translates to: YICGEYSYWSRKSLK*LLYKPAYTFCHTDR Trigger: CCTATCTGTGTGGCAAAATGTGTAGGCTGGTTTATACAGGAGTCACTTCAGACTTTTCCTAGACCAATAGGAATATTCACCACAGATATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
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| 3UTR TCA 90 bp | ATAGCTATATCTGTGGTGAATATTCCTATTGGTCTAGGAAAAGTCTaGAGTGACTCCTGTATAAACCAGCCTACACATTTTGCCACACAG | + |
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Preference number: 1 (lower is better) Translates to: IAISVVNIPIGLGKV*SDSCINQPTHFATQ Trigger: CTGTGTGGCAAAATGTGTAGGCTGGTTTATACAGGAGTCACTTCAGACTTTTCCTAGACCAATAGGAATATTCACCACAGATATAGCTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
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| 3UTR TCA 90 bp | ATTTGCCATAATACATCTAGTTGTTCCTGGACAAGATCTATGTGTTaGTTAATTTCTGCCCATGGAGCATTTTTGGGATTGGAGGATGGC | + |
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Preference number: 1 (lower is better) Translates to: ICHNTSSCSWTRSMC*LISAHGAFLGLEDG Trigger: GCCATCCTCCAATCCCAAAAATGCTCCATGGGCAGAAATTAATCAACACATAGATCTTGTCCAGGAACAACTAGATGTATTATGGCAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
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| 3UTR-3UTR CCA 90 bp | CTTTACTCTGAGAGAACCAGCAGGCCCCAGTGTTGGATGGTCCTGACCAACAAACCGGCTGTCCTCTGTTaGGACAAATCCTATGATCCC | + |
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Preference number: 2 (lower is better) Translates to: LYSERTSRPQCWMVLTNKPAVLC*DKSYDP Trigger: GGGATCATAGGATTTGTCCCAACAGAGGACAGCCGG...TTTGTTGGTCAGGACCATCCAACACTGGGGCCTGCTGGTTCTCTCAGAGTAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
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| 3UTR-3UTR TCA 90 bp | CATAAAAGGATAAGGGCTCATGGAATAAGGGCAACCCAACCTCCATTTCTCCGGCCTCAGTCTCTGGTCTaGTCTCAGGTAGTCTGGCTG | + |
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Preference number: 2 (lower is better) Translates to: HKRIRAHGIRATQPPFLRPQSLV*SQVVWL Trigger: CAGCCAGACTACCTGAGATCAGACCAGAGACTGAGG...CCGGAGAAATGGAGGTTGGGTTGCCCTTATTCCATGAGCCCTTATCCTTTTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
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| 3UTR-3UTR GCA 90 bp | CTTTACTCTGAGAGAACCAGCAGGCCCCAGTGTTGGATGGTCCTGACCAACAAATCCTGTCTTCACTTCTaGAGTCTCCTGTCTTCCCAG | + |
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Preference number: 2 (lower is better) Translates to: LYSERTSRPQCWMVLTNKSCLHF*SLLSSQ Trigger: CTGGGAAGACAGGAGACTGCAGAAGTGAAGACAGGA...TTTGTTGGTCAGGACCATCCAACACTGGGGCCTGCTGGTTCTCTCAGAGTAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
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| 3UTR-3UTR TCA 90 bp | CAAAAGCTTTATTGCTTACATCTTCAGGAGCCAGAGAGCAAGAGTGCAAGAGAGGTGGCTGCCCTGATCTaGCAAGGCCATCTGAAGGCA | + |
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Preference number: 2 (lower is better) Translates to: QKLYCLHLQEPESKSAREVAALI*QGHLKA Trigger: TGCCTTCAGATGGCCTTGTCAGATCAGGGCAGCCAC...CTCTCTTGCACTCTTGCTCTCTGGCTCCTGAAGATGTAAGCAATAAAGCTTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
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| 3UTR-3UTR GCA 90 bp | TGCTGTCAGAAAGCCATGCTACACTTCTTAATGATGCAGGGTCTCAAGTCGCAAAGCATAGCACAGAGATaGTCCTTGGGTCTGGGATCC | + |
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Preference number: 2 (lower is better) Translates to: CCQKAMLHFLMMQGLKSQSIAQR*SLGLGS Trigger: GGATCCCAGACCCAAGGAGCATCTCTGTGCTATGCT...TTGCGACTTGAGACCCTGCATCATTAAGAAGTGTAGCATGGCTTTCTGACAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
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| 3UTR-3UTR CCA 90 bp | GCTCTTCTTGCATTCAGTACACTGAAACCGAGTCTGGCCAGCAAGACTGTCAACTCCTGGAAGAAATCGTaGCATAGTTGCTGGTCAGAG | + |
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Preference number: 2 (lower is better) Translates to: ALLAFSTLKPSLASKTVNSWKKS*HSCWSE Trigger: CTCTGACCAGCAACTATGCCACGATTTCTTCCAGGA...GTTGACAGTCTTGCTGGCCAGACTCGGTTTCAGTGTACTGAATGCAAGAAGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
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| 3UTR-3UTR CCA 90 bp | CTTTACTCTGAGAGAACCAGCAGGCCCCAGTGTTGGATGGTCCTGACCAACAAACTCTCTGCAAAGTGCTaGTCCTCTGCAAAATGCTTT | + |
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Preference number: 2 (lower is better) Translates to: LYSERTSRPQCWMVLTNKLSAKC*SSAKCF Trigger: AAAGCATTTTGCAGAGGACCAGCACTTTGCAGAGAG...TTTGTTGGTCAGGACCATCCAACACTGGGGCCTGCTGGTTCTCTCAGAGTAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
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| 3UTR-3UTR TCA 90 bp | GCTCTTCTTGCATTCAGTACACTGAAACCGAGTCTGGCCAGCAAGACTGTCAACCTTTGGGAAGTAAGTTaGAACCACGAAGACCCTGAA | + |
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Preference number: 2 (lower is better) Translates to: ALLAFSTLKPSLASKTVNLWEVS*NHEDPE Trigger: TTCAGGGTCTTCGTGGTTTCAACTTACTTCCCAAAG...GTTGACAGTCTTGCTGGCCAGACTCGGTTTCAGTGTACTGAATGCAAGAAGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
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| 3UTR-3UTR CCA 90 bp | CATAAAAGGATAAGGGCTCATGGAATAAGGGCAACCCAACCTCCATTTCTCCGGTCGTGGCATAGTTGCTaGTCAGAGATGGCATCATAC | + |
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Preference number: 2 (lower is better) Translates to: HKRIRAHGIRATQPPFLRSWHSC*SEMASY Trigger: GTATGATGCCATCTCTGACCAGCAACTATGCCACGA...CCGGAGAAATGGAGGTTGGGTTGCCCTTATTCCATGAGCCCTTATCCTTTTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
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| 3UTR-3UTR CCA 90 bp | CAAAAGCTTTATTGCTTACATCTTCAGGAGCCAGAGAGCAAGAGTGCAAGAGAGAGCAGGCCCCAGTGTTaGATGGTCCTGACCAACAAA | + |
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Preference number: 2 (lower is better) Translates to: QKLYCLHLQEPESKSARESRPQC*MVLTNK Trigger: TTTGTTGGTCAGGACCATCCAACACTGGGGCCTGCT...CTCTCTTGCACTCTTGCTCTCTGGCTCCTGAAGATGTAAGCAATAAAGCTTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
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| 3UTR-3UTR CCA 90 bp | TGCTGTCAGAAAGCCATGCTACACTTCTTAATGATGCAGGGTCTCAAGTCGCAAATGAGGTTGCCCTTGTaGCTGAATCGTTGCCCACAA | + |
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Preference number: 2 (lower is better) Translates to: CCQKAMLHFLMMQGLKSQMRLPL*LNRCPQ Trigger: TTGTGGGCAACGATTCAGCCACAAGGGCAACCTCAT...TTGCGACTTGAGACCCTGCATCATTAAGAAGTGTAGCATGGCTTTCTGACAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
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| 3UTR CAA 90 bp | TACACATTTTGCCACACAGATAGGCTCAATGTTGGTCCAGATGCCTaGCTAATCCTGTCTTCACTTCTGCAGTCTCCTGTCTTCCCAGAT | + |
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Preference number: 2 (lower is better) Translates to: YTFCHTDRLNVGPDA*LILSSLLQSPVFPD Trigger: ATCTGGGAAGACAGGAGACTGCAGAAGTGAAGACAGGATTAGCAAGGCATCTGGACCAACATTGAGCCTATCTGTGTGGCAAAATGTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
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| 3UTR CAA 90 bp | CAGGAAGAACGCAACAAACCAGAATCTTCTGCGGCAAAAGCTTTATaGCTTACATCTTCAGGAGCCAGAGAGCAAGAGTGCAAGAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: QEERNKPESSAAKAL*LTSSGAREQECKRE Trigger: CTCTCTCTTGCACTCTTGCTCTCTGGCTCCTGAAGATGTAAGCAATAAAGCTTTTGCCGCAGAAGATTCTGGTTTGTTGCGTTCTTCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
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| 3UTR-3UTR TCA 90 bp | GCTCTTCTTGCATTCAGTACACTGAAACCGAGTCTGGCCAGCAAGACTGTCAACGGTCTAGGAAAAGTCTaGAGTGACTCCTGTATAAAC | + |
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Preference number: 2 (lower is better) Translates to: ALLAFSTLKPSLASKTVNGLGKV*SDSCIN Trigger: GTTTATACAGGAGTCACTTCAGACTTTTCCTAGACC...GTTGACAGTCTTGCTGGCCAGACTCGGTTTCAGTGTACTGAATGCAAGAAGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
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| 3UTR-3UTR TCA 90 bp | GCAGGTTTTCATGTGTTGTTTCCAAGTTCCCTGCTGTCAGAAAGCCATGCTACATGCACAAGTTGCACTTaGAGGGTCTCTCTTCTGTGT | + |
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Preference number: 2 (lower is better) Translates to: AGFHVLFPSSLLSESHATCTSCT*RVSLLC Trigger: ACACAGAAGAGAGACCCTTCAAGTGCAACTTGTGCA...TGTAGCATGGCTTTCTGACAGCAGGGAACTTGGAAACAACACATGAAAACCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
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| 3UTR-3UTR CCA 90 bp | GCTCTTCTTGCATTCAGTACACTGAAACCGAGTCTGGCCAGCAAGACTGTCAACAAAATGTCCTCTTCCTaGTTAGTGGATGGCTCTTCA | + |
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Preference number: 2 (lower is better) Translates to: ALLAFSTLKPSLASKTVNKMSSS*LVDGSS Trigger: TGAAGAGCCATCCACTAACCAGGAAGAGGACATTTT...GTTGACAGTCTTGCTGGCCAGACTCGGTTTCAGTGTACTGAATGCAAGAAGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
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| 3UTR CAA 90 bp | CTTTTCCTCGGGTTCAAGACCCTTGGAAAGGCCTGTATACTTATTTaGTGTACCATATTTCCTCTTTGCTCCTACTCTCTCTCCCCGCTT | + |
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Preference number: 2 (lower is better) Translates to: LFLGFKTLGKACILI*CTIFPLCSYSLSPL Trigger: AAGCGGGGAGAGAGAGTAGGAGCAAAGAGGAAATATGGTACACAAAATAAGTATACAGGCCTTTCCAAGGGTCTTGAACCCGAGGAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
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| 3UTR-3UTR TCA 90 bp | TGCTGTCAGAAAGCCATGCTACACTTCTTAATGATGCAGGGTCTCAAGTCGCAAACCCTTCCAAGGAACTaGAACCTCAGAACTTCATGT | + |
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Preference number: 2 (lower is better) Translates to: CCQKAMLHFLMMQGLKSQTLPRN*NLRTSC Trigger: ACATGAAGTTCTGAGGTTTCAGTTCCTTGGAAGGGT...TTGCGACTTGAGACCCTGCATCATTAAGAAGTGTAGCATGGCTTTCTGACAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
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| 3UTR-3UTR CCA 90 bp | GCAGGTTTTCATGTGTTGTTTCCAAGTTCCCTGCTGTCAGAAAGCCATGCTACATTGCTCTACAGGCTATaGGTAAGCAGGCTCAAGATT | + |
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Preference number: 2 (lower is better) Translates to: AGFHVLFPSSLLSESHATLLYRL*VSRLKI Trigger: AATCTTGAGCCTGCTTACCCATAGCCTGTAGAGCAA...TGTAGCATGGCTTTCTGACAGCAGGGAACTTGGAAACAACACATGAAAACCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
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| 3UTR-3UTR GCA 90 bp | TGCTGTCAGAAAGCCATGCTACACTTCTTAATGATGCAGGGTCTCAAGTCGCAAGTTGCCCACAATCCTTaGACACATAAGGATTATCCT | + |
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Preference number: 2 (lower is better) Translates to: CCQKAMLHFLMMQGLKSQVAHNP*THKDYP Trigger: AGGATAATCCTTATGTGTGCAAGGATTGTGGGCAAC...TTGCGACTTGAGACCCTGCATCATTAAGAAGTGTAGCATGGCTTTCTGACAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
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| 3UTR-3UTR CCA 90 bp | TGCTGTCAGAAAGCCATGCTACACTTCTTAATGATGCAGGGTCTCAAGTCGCAAGAAAGCAAAGCTTCCTaGAAGAAATCGTGGCATAGT | + |
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Preference number: 2 (lower is better) Translates to: CCQKAMLHFLMMQGLKSQESKAS*KKSWHS Trigger: ACTATGCCACGATTTCTTCCAGGAAGCTTTGCTTTC...TTGCGACTTGAGACCCTGCATCATTAAGAAGTGTAGCATGGCTTTCTGACAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
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| 3UTR CAA 90 bp | CCTTGGAAAGGCCTGTATACTTATTTTGTGTACCATATTTCCTCTTaGCTCCTACTCTCTCTCCCCGCTTTACTTCTGATAGATTGCCCT | + |
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Preference number: 2 (lower is better) Translates to: PWKGLYTYFVYHISS*LLLSLPALLLIDCP Trigger: AGGGCAATCTATCAGAAGTAAAGCGGGGAGAGAGAGTAGGAGCAAAGAGGAAATATGGTACACAAAATAAGTATACAGGCCTTTCCAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
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| 3UTR-3UTR TCA 90 bp | TGCTGTCAGAAAGCCATGCTACACTTCTTAATGATGCAGGGTCTCAAGTCGCAATTGGGACAAATCCTATaGTCCCATTTATACTCTGCA | + |
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Preference number: 2 (lower is better) Translates to: CCQKAMLHFLMMQGLKSQLGQIL*SHLYSA Trigger: TGCAGAGTATAAATGGGATCATAGGATTTGTCCCAA...TTGCGACTTGAGACCCTGCATCATTAAGAAGTGTAGCATGGCTTTCTGACAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
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| 3UTR-3UTR TCA 90 bp | TGCTGTCAGAAAGCCATGCTACACTTCTTAATGATGCAGGGTCTCAAGTCGCAATTTCCAGAATATGGGTaGATAATGATGGTGCAGCAT | + |
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Preference number: 2 (lower is better) Translates to: CCQKAMLHFLMMQGLKSQFPEYG*IMMVQH Trigger: ATGCTGCACCATCATTATTCACCCATATTCTGGAAA...TTGCGACTTGAGACCCTGCATCATTAAGAAGTGTAGCATGGCTTTCTGACAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
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| 3UTR-3UTR GCA 90 bp | GCAGGTTTTCATGTGTTGTTTCCAAGTTCCCTGCTGTCAGAAAGCCATGCTACAAAAGTGCTGGTCCTCTaGAAAATGCTTTACAAGCTT | + |
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Preference number: 2 (lower is better) Translates to: AGFHVLFPSSLLSESHATKVLVL*KMLYKL Trigger: AAGCTTGTAAAGCATTTTGCAGAGGACCAGCACTTT...TGTAGCATGGCTTTCTGACAGCAGGGAACTTGGAAACAACACATGAAAACCTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
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| 3UTR-3UTR CCA 90 bp | CATAAAAGGATAAGGGCTCATGGAATAAGGGCAACCCAACCTCCATTTCTCCGGTCTCTTTCCAGAATATaGGTGAATAATGATGGTGCA | + |
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Preference number: 2 (lower is better) Translates to: HKRIRAHGIRATQPPFLRSLSRI*VNNDGA Trigger: TGCACCATCATTATTCACCCATATTCTGGAAAGAGA...CCGGAGAAATGGAGGTTGGGTTGCCCTTATTCCATGAGCCCTTATCCTTTTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
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| 3UTR CAA 90 bp | CTAATAGCCTTTTCATCTGATTCAGAACTACTAAGAACTGGCTCCTaGAGCTCATCTAGTGATGAGTATAGGTTCCTTCTCCTAGAGACC | + |
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Preference number: 2 (lower is better) Translates to: LIAFSSDSELLRTGS*SSSSDEYRFLLLET Trigger: GGTCTCTAGGAGAAGGAACCTATACTCATCACTAGATGAGCTCAAGGAGCCAGTTCTTAGTAGTTCTGAATCAGATGAAAAGGCTATTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
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| 3UTR-3UTR TCA 90 bp | CAAAAGCTTTATTGCTTACATCTTCAGGAGCCAGAGAGCAAGAGTGCAAGAGAGGTTGGGAGTAGATTATaGACCAACTGTGATATTTCC | + |
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Preference number: 2 (lower is better) Translates to: QKLYCLHLQEPESKSAREVGSRL*TNCDIS Trigger: GGAAATATCACAGTTGGTTCATAATCTACTCCCAAC...CTCTCTTGCACTCTTGCTCTCTGGCTCCTGAAGATGTAAGCAATAAAGCTTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
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| 3UTR-3UTR GCA 90 bp | AAGACCCTTGGAAAGGCCTGTATACTTATTTTGTGTACCATATTTCCTCTTTGCGATCTCTCTGCAAAGTaGTGGTCCTCTGCAAAATGC | + |
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Preference number: 2 (lower is better) Translates to: KTLGKACILILCTIFPLCDLSAK*WSSAKC Trigger: GCATTTTGCAGAGGACCAGCACTTTGCAGAGAGATC...GCAAAGAGGAAATATGGTACACAAAATAAGTATACAGGCCTTTCCAAGGGTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
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| 3UTR-3UTR GCA 90 bp | AAGACCCTTGGAAAGGCCTGTATACTTATTTTGTGTACCATATTTCCTCTTTGCAAACAAAGAAGCCTCTaGCTCTTCCCAGTCAGGAAC | + |
|
Preference number: 2 (lower is better) Translates to: KTLGKACILILCTIFPLCKQRSL*LFPVRN Trigger: GTTCCTGACTGGGAAGAGGCAGAGGCTTCTTTGTTT...GCAAAGAGGAAATATGGTACACAAAATAAGTATACAGGCCTTTCCAAGGGTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
||
| 3UTR-3UTR CCA 90 bp | GTCTGGCTGTCTCCTCTCAGTAATTACTCCCAGAAAAATGTCCTCTTCCTGGTTGGTGAATATTCCTATTaGTCTAGGAAAAGTCTGAAG | + |
|
Preference number: 2 (lower is better) Translates to: VWLSPLSNYSQKNVLFLVGEYSY*SRKSLK Trigger: CTTCAGACTTTTCCTAGACCAATAGGAATATTCACC...AACCAGGAAGAGGACATTTTTCTGGGAGTAATTACTGAGAGGAGACAGCCAGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
||
| 3UTR-3UTR GCA 90 bp | AAGACCCTTGGAAAGGCCTGTATACTTATTTTGTGTACCATATTTCCTCTTTGCCAATGTTGGTCCAGATaGCTTGCTAATCCTGTCTTC | + |
|
Preference number: 2 (lower is better) Translates to: KTLGKACILILCTIFPLCQCWSR*LANPVF Trigger: GAAGACAGGATTAGCAAGGCATCTGGACCAACATTG...GCAAAGAGGAAATATGGTACACAAAATAAGTATACAGGCCTTTCCAAGGGTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
||
| 3UTR-3UTR CCA 90 bp | CAAAAGCTTTATTGCTTACATCTTCAGGAGCCAGAGAGCAAGAGTGCAAGAGAGTCTCCATGTTTTACCTaGTATATTAGTGATAGTGGC | + |
|
Preference number: 2 (lower is better) Translates to: QKLYCLHLQEPESKSARESPCFT*YISDSG Trigger: GCCACTATCACTAATATACCAGGTAAAACATGGAGA...CTCTCTTGCACTCTTGCTCTCTGGCTCCTGAAGATGTAAGCAATAAAGCTTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
||
| 3UTR-3UTR TCA 90 bp | AAGACCCTTGGAAAGGCCTGTATACTTATTTTGTGTACCATATTTCCTCTTTGCGAAACAGACCACCAATaGACACTCTATACAATGACC | + |
|
Preference number: 2 (lower is better) Translates to: KTLGKACILILCTIFPLCETDHQ*TLYTMT Trigger: GGTCATTGTATAGAGTGTTCATTGGTGGTCTGTTTC...GCAAAGAGGAAATATGGTACACAAAATAAGTATACAGGCCTTTCCAAGGGTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
||
| 3UTR-3UTR GCA 90 bp | AAGACCCTTGGAAAGGCCTGTATACTTATTTTGTGTACCATATTTCCTCTTTGCAAAGAAAGCTCTTCTTaGATTCAGTACACTGAAACC | + |
|
Preference number: 2 (lower is better) Translates to: KTLGKACILILCTIFPLCKESSS*IQYTET Trigger: GGTTTCAGTGTACTGAATGCAAGAAGAGCTTTCTTT...GCAAAGAGGAAATATGGTACACAAAATAAGTATACAGGCCTTTCCAAGGGTCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
||
| 3UTR TCA 72 bp | CAGTATCTTCCTCGGACAGCACAGCACCCTTTACTCTaGGAGAACCAGCAGGCCCCAGTGTTGGATGGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: QYLPRTAQHPLL*ENQQAPVLDGP Trigger: AGGACCATCCAACACTGGGGCCTGCTGGTTCTCTCAGAGTAAAGGGTGCTGTGCTGTCCGAGGAAGATACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
||
| 3UTR TCA 72 bp | CCTGAGGTCCCTGGACGATATTTGTTAGTTTTCCAGTaGCTTCACCTGCTTGGGAGAGCGCCTTCCAGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: PEVPGRYLLVFQ*LHLLGRAPSRP Trigger: GGGCCTGGAAGGCGCTCTCCCAAGCAGGTGAAGTCACTGGAAAACTAACAAATATCGTCCAGGGACCTCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
||
| 3UTR CCA 72 bp | CTTCACTCTGCTCTACTTCACGAAGGCCTGCAGCTCTaGTGGTATGCAGTTAGGAACTGCTCTGACACCAGC | + |
|
Preference number: 3 (lower is better) Translates to: LHSALLHEGLQL*WYAVRNCSDTS Trigger: GCTGGTGTCAGAGCAGTTCCTAACTGCATACCACCAGAGCTGCAGGCCTTCGTGAAGTAGAGCAGAGTGAAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
||
| 3UTR TCA 72 bp | AGGAGAATTATCCTCCGCCTAGGACGTATTACTCCCTaGTTGGCTGCAGCCCATCGGCTCAGTTGTCATCAC | + |
|
Preference number: 3 (lower is better) Translates to: RRIILRLGRITP*LAAAHRLSCHH Trigger: GTGATGACAACTGAGCCGATGGGCTGCAGCCAATCAGGGAGTAATACGTCCTAGGCGGAGGATAATTCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
||
| 3UTR CCA 72 bp | ACCCTTTACTCTGAGAGAACCAGCAGGCCCCAGTGTTaGATGGTCCTGACCAACAAACAAAGAAGCCTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: TLYSERTSRPQC*MVLTNKQRSLC Trigger: GCAGAGGCTTCTTTGTTTGTTGGTCAGGACCATCCAACACTGGGGCCTGCTGGTTCTCTCAGAGTAAAGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
||
| 3UTR TCA 72 bp | ACGCTCTGCTGCCTCTGTCATTCTGGCCACAAAATCTaGGAAGGACTCCTGAGGTCCCTGGACGATATTTGT | + |
|
Preference number: 3 (lower is better) Translates to: TLCCLCHSGHKI*EGLLRSLDDIC Trigger: ACAAATATCGTCCAGGGACCTCAGGAGTCCTTCTCAGATTTTGTGGCCAGAATGACAGAGGCAGCAGAGCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
||
| 3UTR CCA 72 bp | TCGGCTCAGTTGTCATCACAAGAAAGGCAGAACACATaGCGGGAAAACTGCCCCTGCACGTGTGCAGATTAT | + |
|
Preference number: 3 (lower is better) Translates to: SAQLSSQERQNT*RENCPCTCADY Trigger: ATAATCTGCACACGTGCAGGGGCAGTTTTCCCGCCATGTGTTCTGCCTTTCTTGTGATGACAACTGAGCCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
||
| 3UTR TCA 72 bp | AGGACTGTAGAAAGGCCTTGCTGCACAAGTTGCACTTaGAGGGTCTCTCTTCTGTGTGTAAACTCTGACGGA | + |
|
Preference number: 3 (lower is better) Translates to: RTVERPCCTSCT*RVSLLCVNSDG Trigger: TCCGTCAGAGTTTACACACAGAAGAGAGACCCTTCAAGTGCAACTTGTGCAGCAAGGCCTTTCTACAGTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
||
| 3UTR GCA 72 bp | GACCGGCCAGGAAGAACGCAACAAACCAGAATCTTCTaGGGCAAAAGCTTTATTGCTTACATCTTCAGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: DRPGRTQQTRIF*GKSFIAYIFRS Trigger: GCTCCTGAAGATGTAAGCAATAAAGCTTTTGCCGCAGAAGATTCTGGTTTGTTGCGTTCTTCCTGGCCGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
||
| 3UTR CCA 72 bp | CTACACTTCTTAATGATGCAGGGTCTCAAGTCGCAATaGATGCGGAAATGGACAATGAGGTTGCCCTTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: LHFLMMQGLKSQ*MRKWTMRLPLW Trigger: CCACAAGGGCAACCTCATTGTCCATTTCCGCATCCATTGCGACTTGAGACCCTGCATCATTAAGAAGTGTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
||
| 3UTR-3UTR CAA 90 bp | TGCTGTCAGAAAGCCATGCTACACTTCTTAATGATGCAGGGTCTCAAGTCGCAATTCAGAATCTCCTCCTaGTTGTTTAGGTCCGGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: CCQKAMLHFLMMQGLKSQFRISS*LFRSGL Trigger: GAGGCCGGACCTAAACAACAAGGAGGAGATTCTGAA...TTGCGACTTGAGACCCTGCATCATTAAGAAGTGTAGCATGGCTTTCTGACAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
||
| 3UTR GCA 72 bp | TTCACTTCTGCAGTCTCCTGTCTTCCCAGATCTCTCTaGAAAGTGCTGGTCCTCTGCAAAATGCTTTACAAG | + |
|
Preference number: 3 (lower is better) Translates to: FTSAVSCLPRSL*KVLVLCKMLYK Trigger: CTTGTAAAGCATTTTGCAGAGGACCAGCACTTTGCAGAGAGATCTGGGAAGACAGGAGACTGCAGAAGTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
||
| 3UTR GCA 72 bp | TTCATCCTTCACAAAGCTGGGACCTCGAAGAAGGTATaGCTGTCGTTGGGAGTAGATTATGAACCAACTGTG | + |
|
Preference number: 3 (lower is better) Translates to: FILHKAGTSKKV*LSLGVDYEPTV Trigger: CACAGTTGGTTCATAATCTACTCCCAACGACAGGCATACCTTCTTCGAGGTCCCAGCTTTGTGAAGGATGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
||
| 3UTR CCA 72 bp | ACGATATTTGTTAGTTTTCCAGTGACTTCACCTGCTTaGGAGAGCGCCTTCCAGGCCCTAATAGCCTTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: TIFVSFPVTSPA*ESAFQALIAFS Trigger: TGAAAAGGCTATTAGGGCCTGGAAGGCGCTCTCCCAAGCAGGTGAAGTCACTGGAAAACTAACAAATATCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
||
| 3UTR CCA 72 bp | CTGGACAAGATCTATGTGTTGATTAATTTCTGCCCATaGAGCATTTTTGGGATTGGAGGATGGCGGCCGCTA | + |
|
Preference number: 3 (lower is better) Translates to: LDKIYVLINFCP*SIFGIGGWRPL Trigger: TAGCGGCCGCCATCCTCCAATCCCAAAAATGCTCCATGGGCAGAAATTAATCAACACATAGATCTTGTCCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
||
| 3UTR TCA 72 bp | CTCGAAGAAGGTATGCCTGTCGTTGGGAGTAGATTATaGACCAACTGTGATATTTCCCATCCCTCAGCATGT | + |
|
Preference number: 3 (lower is better) Translates to: LEEGMPVVGSRL*TNCDISHPSAC Trigger: ACATGCTGAGGGATGGGAAATATCACAGTTGGTTCATAATCTACTCCCAACGACAGGCATACCTTCTTCGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
||
| 3UTR TCA 72 bp | TCTGTCATTCTGGCCACAAAATCTGAGAAGGACTCCTaGGGTCCCTGGACGATATTTGTTAGTTTTCCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: SVILATKSEKDS*GPWTIFVSFPV Trigger: CACTGGAAAACTAACAAATATCGTCCAGGGACCTCAGGAGTCCTTCTCAGATTTTGTGGCCAGAATGACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
||
| 3UTR GCA 72 bp | CTGCAGTCTCCTGTCTTCCCAGATCTCTCTGCAAAGTaGTGGTCCTCTGCAAAATGCTTTACAAGCTTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: LQSPVFPDLSAK*WSSAKCFTSFL Trigger: TAAAAAGCTTGTAAAGCATTTTGCAGAGGACCAGCACTTTGCAGAGAGATCTGGGAAGACAGGAGACTGCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
||
| 3UTR GCA 72 bp | ACTGTGATATTTCCCATCCCTCAGCATGTTTTTCTTTaGAGCTCTTCACTCTGCTCTACTTCACGAAGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: TVIFPIPQHVFL*SSSLCSTSRRP Trigger: AGGCCTTCGTGAAGTAGAGCAGAGTGAAGAGCTGCAAAGAAAAACATGCTGAGGGATGGGAAATATCACAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
||
| 3UTR GCA 72 bp | GCAACAAACCAGAATCTTCTGCGGCAAAAGCTTTATTaGTTACATCTTCAGGAGCCAGAGAGCAAGAGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: ATNQNLLRQKLY*LHLQEPESKSA Trigger: TGCACTCTTGCTCTCTGGCTCCTGAAGATGTAAGCAATAAAGCTTTTGCCGCAGAAGATTCTGGTTTGTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
||
| 3UTR-3UTR CAA 90 bp | AAGACCCTTGGAAAGGCCTGTATACTTATTTTGTGTACCATATTTCCTCTTTGCCTTGTGGCTGAATCGTaGCCCACAATCCTTGCACAC | + |
|
Preference number: 3 (lower is better) Translates to: KTLGKACILILCTIFPLCLVAES*PTILAH Trigger: GTGTGCAAGGATTGTGGGCAACGATTCAGCCACAAG...GCAAAGAGGAAATATGGTACACAAAATAAGTATACAGGCCTTTCCAAGGGTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
||
| 3UTR GCA 72 bp | CTCCTACTCTCTCTCCCCGCTTTACTTCTGATAGATTaGCCTGAATTTCATCCAGAATTTTCAGTCCTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: LLLSLPALLLID*PEFHPEFSVLP Trigger: AGGAAGGACTGAAAATTCTGGATGAAATTCAGGGCAATCTATCAGAAGTAAAGCGGGGAGAGAGAGTAGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
||
| 3UTR GCA 72 bp | TTGTTCCTGGACAAGATCTATGTGTTGATTAATTTCTaGCCATGGAGCATTTTTGGGATTGGAGGATGGCGG | + |
|
Preference number: 3 (lower is better) Translates to: LFLDKIYVLINF*PWSIFGIGGWR Trigger: CCGCCATCCTCCAATCCCAAAAATGCTCCATGGGCAGAAATTAATCAACACATAGATCTTGTCCAGGAACAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
||
| 3UTR CCA 72 bp | CTCTCAGTAATTACTCCCAGAAAAATGTCCTCTTCCTaGTTAGTGGATGGCTCTTCAGTCTCTGAGAAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: LSVITPRKMSSS*LVDGSSVSEKF Trigger: GAACTTCTCAGAGACTGAAGAGCCATCCACTAACCAGGAAGAGGACATTTTTCTGGGAGTAATTACTGAGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
||
| 3UTR-3UTR CAA 90 bp | AAGACCCTTGGAAAGGCCTGTATACTTATTTTGTGTACCATATTTCCTCTTTGCAGAATCTCCTCCTTGTaGTTTAGGTCCGGCCTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: KTLGKACILILCTIFPLCRISSL*FRSGLS Trigger: ACTGAGGCCGGACCTAAACAACAAGGAGGAGATTCT...GCAAAGAGGAAATATGGTACACAAAATAAGTATACAGGCCTTTCCAAGGGTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
||
| 3UTR TCA 72 bp | ACTCTCTCTCCCCGCTTTACTTCTGATAGATTGCCCTaGATTTCATCCAGAATTTTCAGTCCTTCCTTAACC | + |
|
Preference number: 3 (lower is better) Translates to: TLSPRFTSDRLP*ISSRIFSPSLT Trigger: GGTTAAGGAAGGACTGAAAATTCTGGATGAAATTCAGGGCAATCTATCAGAAGTAAAGCGGGGAGAGAGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
||
| 3UTR TCA 72 bp | ATAAATAAGCTATTCTACCAGAGGTGTGGCTTGCTCTaGATCTCCAAAAATACGCTCTGCTGCCTCTGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: INKLFYQRCGLL*ISKNTLCCLCH Trigger: ATGACAGAGGCAGCAGAGCGTATTTTTGGAGATTCAGAGCAAGCCACACCTCTGGTAGAATAGCTTATTTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
||
| 3UTR CCA 72 bp | CCCACACAAGACAACCTATACCTGACAATGCCAGTATaGCTAAGTATCTTAGACTATATAGGTCATGGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: PTQDNLYLTMPV*LSILDYIGHGL Trigger: AAGCCCATGACCTATATAGTCTAAGATACTTAGCCATACTGGCATTGTCAGGTATAGGTTGTCTTGTGTGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
||
| 3UTR TCA 72 bp | GGTGAATATTCCTATTGGTCTAGGAAAAGTCTGAAGTaGCTCCTGTATAAACCAGCCTACACATTTTGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: GEYSYWSRKSLK*LLYKPAYTFCH Trigger: GTGGCAAAATGTGTAGGCTGGTTTATACAGGAGTCACTTCAGACTTTTCCTAGACCAATAGGAATATTCACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
||
| 3UTR-3UTR CAA 90 bp | AAGACCCTTGGAAAGGCCTGTATACTTATTTTGTGTACCATATTTCCTCTTTGCTCAGCATGTTTTTCTTaGCAGCTCTTCACTCTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: KTLGKACILILCTIFPLCSACFS*QLFTLL Trigger: GAGCAGAGTGAAGAGCTGCAAAGAAAAACATGCTGA...GCAAAGAGGAAATATGGTACACAAAATAAGTATACAGGCCTTTCCAAGGGTCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
||
| 3UTR GCA 72 bp | TTATTGCTTACATCTTCAGGAGCCAGAGAGCAAGAGTaGAAGAGAGAGAAAAAGAAAGCAAGAACAAGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: LLLTSSGAREQE*KREKKKARTRK Trigger: CTTTCTTGTTCTTGCTTTCTTTTTCTCTCTCTTGCACTCTTGCTCTCTGGCTCCTGAAGATGTAAGCAATAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
||
| 3UTR TCA 72 bp | TCTGTGGTGAATATTCCTATTGGTCTAGGAAAAGTCTaGAGTGACTCCTGTATAAACCAGCCTACACATTTT | + |
|
Preference number: 3 (lower is better) Translates to: SVVNIPIGLGKV*SDSCINQPTHF Trigger: AAAATGTGTAGGCTGGTTTATACAGGAGTCACTTCAGACTTTTCCTAGACCAATAGGAATATTCACCACAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
||
| 3UTR TCA 72 bp | CCCTATTCAAGGCTAAATCTCTTTCCAGAATATGGGTaGATAATGATGGTGCAGCATCCAAAACAGTATCTT | + |
|
Preference number: 3 (lower is better) Translates to: PYSRLNLFPEYG*IMMVQHPKQYL Trigger: AAGATACTGTTTTGGATGCTGCACCATCATTATTCACCCATATTCTGGAAAGAGATTTAGCCTTGAATAGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
||
| 3UTR TCA 72 bp | ATGGATCCAGAATTATGCAGATGCCTTTATATTTCTTaGGCAGGTTTTCATGTGTTGTTTCCAAGTTCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: MDPELCRCLYIS*AGFHVLFPSSL Trigger: CAGGGAACTTGGAAACAACACATGAAAACCTGCTCAAGAAATATAAAGGCATCTGCATAATTCTGGATCCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
||
| 3UTR TCA 72 bp | AATACATCTAGTTGTTCCTGGACAAGATCTATGTGTTaGTTAATTTCTGCCCATGGAGCATTTTTGGGATTG | + |
|
Preference number: 3 (lower is better) Translates to: NTSSCSWTRSMC*LISAHGAFLGL Trigger: CAATCCCAAAAATGCTCCATGGGCAGAAATTAATCAACACATAGATCTTGTCCAGGAACAACTAGATGTATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
||
| 3UTR CAA 72 bp | GCCTCAGTCATTGATAGCATAGCACAGAGATGCTCCTaGGGTCTGGGATCCTGTGACCCTTCCAAGGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: ASVIDSIAQRCS*GLGSCDPSKEL Trigger: CAGTTCCTTGGAAGGGTCACAGGATCCCAGACCCAAGGAGCATCTCTGTGCTATGCTATCAATGACTGAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
||
| 3UTR CAA 72 bp | TATTACTCCCTGATTGGCTGCAGCCCATCGGCTCAGTaGTCATCACAAGAAAGGCAGAACACATGGCGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: YYSLIGCSPSAQ*SSQERQNTWRE Trigger: TTCCCGCCATGTGTTCTGCCTTTCTTGTGATGACAACTGAGCCGATGGGCTGCAGCCAATCAGGGAGTAATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
||
| 3UTR CAA 72 bp | TGCCACACAGATAGGCTCAATGTTGGTCCAGATGCCTaGCTAATCCTGTCTTCACTTCTGCAGTCTCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: CHTDRLNVGPDA*LILSSLLQSPV Trigger: GACAGGAGACTGCAGAAGTGAAGACAGGATTAGCAAGGCATCTGGACCAACATTGAGCCTATCTGTGTGGCA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
||
| CDS-3UTR TCA 90 bp | GCTCTTCTTGCATTCAGTACACTGAAACCGAGTCTGGCCAGCAAGACTGTCAACATAAGGCAAGCTCATTaGCTTGTATGTCAGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ALLAFSTLKPSLASKTVNIRQAH*LVCQSR Trigger: CCTGCTCTGACATACAAGTCAATGAGCTTGCCTTAT...GTTGACAGTCTTGCTGGCCAGACTCGGTTTCAGTGTACTGAATGCAAGAAGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
||
| CDS-3UTR GCA 90 bp | CATAAAAGGATAAGGGCTCATGGAATAAGGGCAACCCAACCTCCATTTCTCCGGATCAAACGCCATCATTaGCAGCAGCATACACTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: HKRIRAHGIRATQPPFLRIKRHH*QQHTLH Trigger: GTGGAGTGTATGCTGCTGGCAATGATGGCGTTTGAT...CCGGAGAAATGGAGGTTGGGTTGCCCTTATTCCATGAGCCCTTATCCTTTTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
||
| CDS-3UTR TCA 90 bp | CTTTACTCTGAGAGAACCAGCAGGCCCCAGTGTTGGATGGTCCTGACCAACAAACAGAAGATGAAGAACTaGAGAACACAGCCAAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LYSERTSRPQCWMVLTNKQKMKN*RTQPRK Trigger: TTTTCTTGGCTGTGTTCTTCAGTTCTTCATCTTCTG...TTTGTTGGTCAGGACCATCCAACACTGGGGCCTGCTGGTTCTCTCAGAGTAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
||
| CDS-3UTR TCA 90 bp | TGCTGTCAGAAAGCCATGCTACACTTCTTAATGATGCAGGGTCTCAAGTCGCAAATAGCAAGGGGTTGCTaGTTGCCTTGTACCGATCAA | + |
|
Preference number: 4 (lower is better) Translates to: CCQKAMLHFLMMQGLKSQIARGC*LPCTDQ Trigger: TTGATCGGTACAAGGCAATCAGCAACCCCTTGCTAT...TTGCGACTTGAGACCCTGCATCATTAAGAAGTGTAGCATGGCTTTCTGACAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
||
| CDS-3UTR GCA 90 bp | TGCTGTCAGAAAGCCATGCTACACTTCTTAATGATGCAGGGTCTCAAGTCGCAACATCTTTGGTCCAACTaGAGAGGAGTAGCAGACATC | + |
|
Preference number: 4 (lower is better) Translates to: CCQKAMLHFLMMQGLKSQHLWSN*RGVADI Trigger: GATGTCTGCTACTCCTCTGCAGTTGGACCAAAGATG...TTGCGACTTGAGACCCTGCATCATTAAGAAGTGTAGCATGGCTTTCTGACAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
||
| 3UTR CAA 72 bp | CACAAAGCTGGGACCTCGAAGAAGGTATGCCTGTCGTaGGGAGTAGATTATGAACCAACTGTGATATTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: HKAGTSKKVCLS*GVDYEPTVIFP Trigger: GGGAAATATCACAGTTGGTTCATAATCTACTCCCAACGACAGGCATACCTTCTTCGAGGTCCCAGCTTTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
||
| 3UTR CAA 72 bp | CGCAACAAACCAGAATCTTCTGCGGCAAAAGCTTTATaGCTTACATCTTCAGGAGCCAGAGAGCAAGAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RNKPESSAAKAL*LTSSGAREQEC Trigger: GCACTCTTGCTCTCTGGCTCCTGAAGATGTAAGCAATAAAGCTTTTGCCGCAGAAGATTCTGGTTTGTTGCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
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| CDS-3UTR TCA 90 bp | GCAGGTTTTCATGTGTTGTTTCCAAGTTCCCTGCTGTCAGAAAGCCATGCTACAAGAGACAAGTACTCCTaGGATGGTGCTCAGTTCAAT | + |
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Preference number: 4 (lower is better) Translates to: AGFHVLFPSSLLSESHATRDKYS*DGAQFN Trigger: ATTGAACTGAGCACCATCTCAGGAGTACTTGTCTCT...TGTAGCATGGCTTTCTGACAGCAGGGAACTTGGAAACAACACATGAAAACCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
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| CDS-3UTR TCA 90 bp | CATAAAAGGATAAGGGCTCATGGAATAAGGGCAACCCAACCTCCATTTCTCCGGTCAGGACTGATAGAATaGTATAGCAGTAAGAGACAA | + |
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Preference number: 4 (lower is better) Translates to: HKRIRAHGIRATQPPFLRSGLIE*YSSKRQ Trigger: TTGTCTCTTACTGCTATATCATTCTATCAGTCCTGA...CCGGAGAAATGGAGGTTGGGTTGCCCTTATTCCATGAGCCCTTATCCTTTTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
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| CDS-3UTR TCA 90 bp | TGCTGTCAGAAAGCCATGCTACACTTCTTAATGATGCAGGGTCTCAAGTCGCAACAAGGTGTAAAACAGTaGGGTCATTTTGTCTTGATC | + |
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Preference number: 4 (lower is better) Translates to: CCQKAMLHFLMMQGLKSQQGVKQ*GHFVLI Trigger: GATCAAGACAAAATGACCTCACTGTTTTACACCTTG...TTGCGACTTGAGACCCTGCATCATTAAGAAGTGTAGCATGGCTTTCTGACAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
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| CDS-3UTR GCA 90 bp | AAGACCCTTGGAAAGGCCTGTATACTTATTTTGTGTACCATATTTCCTCTTTGCCAAGGGGTTGCTGATTaGCTTGTACCGATCAAACGC | + |
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Preference number: 4 (lower is better) Translates to: KTLGKACILILCTIFPLCQGVAD*LVPIKR Trigger: GCGTTTGATCGGTACAAGGCAATCAGCAACCCCTTG...GCAAAGAGGAAATATGGTACACAAAATAAGTATACAGGCCTTTCCAAGGGTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
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| 3UTR CAA 72 bp | GGGTTCAAGACCCTTGGAAAGGCCTGTATACTTATTTaGTGTACCATATTTCCTCTTTGCTCCTACTCTCTC | + |
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Preference number: 4 (lower is better) Translates to: GFKTLGKACILI*CTIFPLCSYSL Trigger: GAGAGAGTAGGAGCAAAGAGGAAATATGGTACACAAAATAAGTATACAGGCCTTTCCAAGGGTCTTGAACCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
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| CDS-3UTR CCA 90 bp | TCCTGTGACCCTTCCAAGGAACTGAAACCTCAGAACTTCATGTGCCAAAAATCAGGTAACACACCTTGCTaGACATATCTACTGCATATA | + |
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Preference number: 4 (lower is better) Translates to: SCDPSKELKPQNFMCQKSGNTPC*TYLLHI Trigger: TATATGCAGTAGATATGTCCAGCAAGGTGTGTTACC...TGATTTTTGGCACATGAAGTTCTGAGGTTTCAGTTCCTTGGAAGGGTCACAGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
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| 3UTR CAA 72 bp | TTACCTGTCCTAAACTTTTCCTCGGGTTCAAGACCCTaGGAAAGGCCTGTATACTTATTTTGTGTACCATAT | + |
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Preference number: 4 (lower is better) Translates to: LPVLNFSSGSRP*ERPVYLFCVPY Trigger: ATATGGTACACAAAATAAGTATACAGGCCTTTCCAAGGGTCTTGAACCCGAGGAAAAGTTTAGGACAGGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
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| 3UTR CAA 72 bp | TTTTCATCTGATTCAGAACTACTAAGAACTGGCTCCTaGAGCTCATCTAGTGATGAGTATAGGTTCCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: FSSDSELLRTGS*SSSSDEYRFLL Trigger: GAGAAGGAACCTATACTCATCACTAGATGAGCTCAAGGAGCCAGTTCTTAGTAGTTCTGAATCAGATGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
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| CDS-3UTR CCA 90 bp | AAGACCCTTGGAAAGGCCTGTATACTTATTTTGTGTACCATATTTCCTCTTTGCCTACAGCATCTACAATaGCAACTGTGTAAACTACAG | + |
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Preference number: 4 (lower is better) Translates to: KTLGKACILILCTIFPLCLQHLQ*QLCKLQ Trigger: CTGTAGTTTACACAGTTGCCATTGTAGATGCTGTAG...GCAAAGAGGAAATATGGTACACAAAATAAGTATACAGGCCTTTCCAAGGGTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
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| 3UTR CAA 72 bp | GATGGATCCAGAATTATGCAGATGCCTTTATATTTCTaGAGCAGGTTTTCATGTGTTGTTTCCAAGTTCCCT | + |
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Preference number: 4 (lower is better) Translates to: DGSRIMQMPLYF*SRFSCVVSKFP Trigger: AGGGAACTTGGAAACAACACATGAAAACCTGCTCAAGAAATATAAAGGCATCTGCATAATTCTGGATCCATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
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| CDS-3UTR CAA 90 bp | CATAAAAGGATAAGGGCTCATGGAATAAGGGCAACCCAACCTCCATTTCTCCGGGGTCCAATAACATCTTaGGTCCAACTGCAGAGGAGT | + |
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Preference number: 5 (lower is better) Translates to: HKRIRAHGIRATQPPFLRGPITS*VQLQRS Trigger: ACTCCTCTGCAGTTGGACCAAAGATGTTATTGGACC...CCGGAGAAATGGAGGTTGGGTTGCCCTTATTCCATGAGCCCTTATCCTTTTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
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| CDS-3UTR CAA 90 bp | CTTTACTCTGAGAGAACCAGCAGGCCCCAGTGTTGGATGGTCCTGACCAACAAAAGAAAAGTAATTGAATaGCTGCTCTTGGCAAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: LYSERTSRPQCWMVLTNKRKVIE*LLLASR Trigger: CCTGCTTGCCAAGAGCAGCAATTCAATTACTTTTCT...TTTGTTGGTCAGGACCATCCAACACTGGGGCCTGCTGGTTCTCTCAGAGTAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
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| CDS-3UTR CAA 90 bp | TGCTGTCAGAAAGCCATGCTACACTTCTTAATGATGCAGGGTCTCAAGTCGCAAGCATATAGCAAGGGGTaGCTGATTGCCTTGTACCGA | + |
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Preference number: 5 (lower is better) Translates to: CCQKAMLHFLMMQGLKSQAYSKG*LIALYR Trigger: TCGGTACAAGGCAATCAGCAACCCCTTGCTATATGC...TTGCGACTTGAGACCCTGCATCATTAAGAAGTGTAGCATGGCTTTCTGACAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
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| CDS-3UTR CAA 90 bp | CATAAAAGGATAAGGGCTCATGGAATAAGGGCAACCCAACCTCCATTTCTCCGGAACTACAGCCAGAAGTaGGTAACACACCTTGCTGGA | + |
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Preference number: 5 (lower is better) Translates to: HKRIRAHGIRATQPPFLRNYSQK*VTHLAG Trigger: TCCAGCAAGGTGTGTTACCAACTTCTGGCTGTAGTT...CCGGAGAAATGGAGGTTGGGTTGCCCTTATTCCATGAGCCCTTATCCTTTTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
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| CDS-3UTR CAA 90 bp | CAAAAGCTTTATTGCTTACATCTTCAGGAGCCAGAGAGCAAGAGTGCAAGAGAGATTGAATTGCTGCTCTaGGCAAGCAGGTCCAATAAC | + |
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Preference number: 5 (lower is better) Translates to: QKLYCLHLQEPESKSAREIELLL*ASRSNN Trigger: GTTATTGGACCTGCTTGCCAAGAGCAGCAATTCAAT...CTCTCTTGCACTCTTGCTCTCTGGCTCCTGAAGATGTAAGCAATAAAGCTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
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| CDS TCA 90 bp | AGCAGCATACACTCCACATCTGTAAAGATGCAGAAGATGAAGAACTaGAGAACACAGCCAAGAAAAGTAATTGAATTGCTGCTCTTGGCA | + |
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Preference number: 5 (lower is better) Translates to: SSIHSTSVKMQKMKN*RTQPRKVIELLLLA Trigger: TGCCAAGAGCAGCAATTCAATTACTTTTCTTGGCTGTGTTCTTCAGTTCTTCATCTTCTGCATCTTTACAGATGTGGAGTGTATGCTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051058.3 ENSMUST00000213308.3 |
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| CDS-3UTR CAA 90 bp | AAGACCCTTGGAAAGGCCTGTATACTTATTTTGTGTACCATATTTCCTCTTTGCAATAAGGCAAGCTCATaGACTTGTATGTCAGAGCAG | + |
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Preference number: 5 (lower is better) Translates to: KTLGKACILILCTIFPLCNKASS*TCMSEQ Trigger: CTGCTCTGACATACAAGTCAATGAGCTTGCCTTATT...GCAAAGAGGAAATATGGTACACAAAATAAGTATACAGGCCTTTCCAAGGGTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213308.3 |
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| CDS CAA 72 bp | AGAACACAGCCAAGAAAAGTAATTGAATTGCTGCTCTaGGCAAGCAGGTCCAATAACATCTTTGGTCCAACT | + |
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Preference number: 6 (lower is better) Translates to: RTQPRKVIELLL*ASRSNNIFGPT Trigger: AGTTGGACCAAAGATGTTATTGGACCTGCTTGCCAAGAGCAGCAATTCAATTACTTTTCTTGGCTGTGTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051058.3 ENSMUST00000213308.3 |
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| CDS CCA 72 bp | GAAATGTCAATGTTGTGTGTACTACAGCATCTACAATaGCAACTGTGTAAACTACAGCCAGAAGTTGGTAAC | + |
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Preference number: 6 (lower is better) Translates to: EMSMLCVLQHLQ*QLCKLQPEVGN Trigger: GTTACCAACTTCTGGCTGTAGTTTACACAGTTGCCATTGTAGATGCTGTAGTACACACAACATTGACATTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051058.3 ENSMUST00000213308.3 |
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| CDS TCA 72 bp | CACTCCACATCTGTAAAGATGCAGAAGATGAAGAACTaGAGAACACAGCCAAGAAAAGTAATTGAATTGCTG | + |
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Preference number: 6 (lower is better) Translates to: HSTSVKMQKMKN*RTQPRKVIELL Trigger: CAGCAATTCAATTACTTTTCTTGGCTGTGTTCTTCAGTTCTTCATCTTCTGCATCTTTACAGATGTGGAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051058.3 ENSMUST00000213308.3 |
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| CDS CAA 72 bp | AAAGTGGTAAATAAAATCACCTTGATCACAGGATTATaGGTAATTCCCAAGAAAAGGAACTCAGTGGCTGAA | + |
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Preference number: 6 (lower is better) Translates to: KVVNKITLITGL*VIPKKRNSVAE Trigger: TTCAGCCACTGAGTTCCTTTTCTTGGGAATTACCAATAATCCTGTGATCAAGGTGATTTTATTTACCACTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051058.3 ENSMUST00000213308.3 |
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