Pregenerated sensors for OLFR1143 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000068815Ensembl transcript IDs: ENSMUST00000090708.2, ENSMUST00000099852.6, ENSMUST00000111568.5
Found 36 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 72 bp | GAACCTCTACACAAACTACCATATTCTAGTCATCTCTaGCTTGTTCTTTCAGAGCCAAAGAGGAAACAGTGT | + |
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Preference number: 3 (lower is better) Translates to: EPLHKLPYSSHL*LVLSEPKRKQC Trigger: ACACTGTTTCCTCTTTGGCTCTGAAAGAACAAGCCAGAGATGACTAGAATATGGTAGTTTGTGTAGAGGTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099852.6 ENSMUST00000111568.5 |
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| CDS-3UTR TCA 90 bp | CTGGCTTGTTCTTTCAGAGCCAAAGAGGAAACAGTGTATCAAGATCTAGGGAACAAAGCAAGGGGTTGCTaGTGGCCTGGTACCGGTCAA | + |
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Preference number: 4 (lower is better) Translates to: LACSFRAKEETVYQDLGNKARGC*WPGTGQ Trigger: TTGACCGGTACCAGGCCATCAGCAACCCCTTGCTTT...GTTCCCTAGATCTTGATACACTGTTTCCTCTTTGGCTCTGAAAGAACAAGCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099852.6 ENSMUST00000111568.5 |
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| CDS-3UTR TCA 90 bp | GAACCTCTACACAAACTACCATATTCTAGTCATCTCTGGCTTGTTCTTTCAGAGAAAGCAAGGGGTTGCTaGTGGCCTGGTACCGGTCAA | + |
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Preference number: 4 (lower is better) Translates to: EPLHKLPYSSHLWLVLSEKARGC*WPGTGQ Trigger: TTGACCGGTACCAGGCCATCAGCAACCCCTTGCTTT...CTCTGAAAGAACAAGCCAGAGATGACTAGAATATGGTAGTTTGTGTAGAGGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099852.6 ENSMUST00000111568.5 |
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| CDS-3UTR TCA 90 bp | CTGGCTTGTTCTTTCAGAGCCAAAGAGGAAACAGTGTATCAAGATCTAGGGAACTGCCCCCAGCAGAGCTaGTCTTCAAAACTGATGAGA | + |
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Preference number: 4 (lower is better) Translates to: LACSFRAKEETVYQDLGNCPQQS*SSKLMR Trigger: TCTCATCAGTTTTGAAGATCAGCTCTGCTGGGGGCA...GTTCCCTAGATCTTGATACACTGTTTCCTCTTTGGCTCTGAAAGAACAAGCCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099852.6 ENSMUST00000111568.5 |
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| CDS-3UTR TCA 90 bp | TCTTTCAGAGCCAAAGAGGAAACAGTGTATCAAGATCTAGGGAACTGGGTGCAATGCCCCCAGCAGAGCTaGTCTTCAAAACTGATGAGA | + |
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Preference number: 4 (lower is better) Translates to: SFRAKEETVYQDLGNWVQCPQQS*SSKLMR Trigger: TCTCATCAGTTTTGAAGATCAGCTCTGCTGGGGGCA...TTGCACCCAGTTCCCTAGATCTTGATACACTGTTTCCTCTTTGGCTCTGAAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099852.6 ENSMUST00000111568.5 |
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| CDS-3UTR GCA 90 bp | TCTTTCAGAGCCAAAGAGGAAACAGTGTATCAAGATCTAGGGAACTGGGTGCAACATCTTGGGCCCAACTaGTGTGGAATAGCAGAGATC | + |
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Preference number: 4 (lower is better) Translates to: SFRAKEETVYQDLGNWVQHLGPN*CGIAEI Trigger: GATCTCTGCTATTCCACAGCAGTTGGGCCCAAGATG...TTGCACCCAGTTCCCTAGATCTTGATACACTGTTTCCTCTTTGGCTCTGAAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099852.6 ENSMUST00000111568.5 |
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| CDS-3UTR GCA 90 bp | CTGGCTTGTTCTTTCAGAGCCAAAGAGGAAACAGTGTATCAAGATCTAGGGAACTTGGAAAATCGCAACTaGAGTCAGGTGGGAGGCACA | + |
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Preference number: 4 (lower is better) Translates to: LACSFRAKEETVYQDLGNLENRN*SQVGGT Trigger: TGTGCCTCCCACCTGACTGCAGTTGCGATTTTCCAA...GTTCCCTAGATCTTGATACACTGTTTCCTCTTTGGCTCTGAAAGAACAAGCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099852.6 ENSMUST00000111568.5 |
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| CDS-3UTR GCA 90 bp | TCTGGCTTGTTCTTTCAGAGCCAAAGAGGAAACAGTGTATCAAGATCTAGGGAACATCTTGGGCCCAACTaGTGTGGAATAGCAGAGATC | + |
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Preference number: 4 (lower is better) Translates to: SGLFFQSQRGNSVSRSREHLGPN*CGIAEI Trigger: GATCTCTGCTATTCCACAGCAGTTGGGCCCAAGATG...TTCCCTAGATCTTGATACACTGTTTCCTCTTTGGCTCTGAAAGAACAAGCCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099852.6 ENSMUST00000111568.5 |
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| CDS-3UTR CCA 90 bp | TCTGGCTTGTTCTTTCAGAGCCAAAGAGGAAACAGTGTATCAAGATCTAGGGAATGGGCCCAACTGCTGTaGAATAGCAGAGATCACAGA | + |
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Preference number: 4 (lower is better) Translates to: SGLFFQSQRGNSVSRSREWAQLL*NSRDHR Trigger: TCTGTGATCTCTGCTATTCCACAGCAGTTGGGCCCA...TTCCCTAGATCTTGATACACTGTTTCCTCTTTGGCTCTGAAAGAACAAGCCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099852.6 ENSMUST00000111568.5 |
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| CDS-3UTR TCA 90 bp | TCTTTCAGAGCCAAAGAGGAAACAGTGTATCAAGATCTAGGGAACTGGGTGCAATTGGCCGGAAATACATaGAAAGCACAGTTCCTTGGA | + |
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Preference number: 4 (lower is better) Translates to: SFRAKEETVYQDLGNWVQLAGNT*KAQFLG Trigger: TCCAAGGAACTGTGCTTTTCATGTATTTCCGGCCAA...TTGCACCCAGTTCCCTAGATCTTGATACACTGTTTCCTCTTTGGCTCTGAAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099852.6 ENSMUST00000111568.5 |
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| CDS-3UTR TCA 90 bp | CTGGCTTGTTCTTTCAGAGCCAAAGAGGAAACAGTGTATCAAGATCTAGGGAACTTGGCCGGAAATACATaGAAAGCACAGTTCCTTGGA | + |
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Preference number: 4 (lower is better) Translates to: LACSFRAKEETVYQDLGNLAGNT*KAQFLG Trigger: TCCAAGGAACTGTGCTTTTCATGTATTTCCGGCCAA...GTTCCCTAGATCTTGATACACTGTTTCCTCTTTGGCTCTGAAAGAACAAGCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099852.6 ENSMUST00000111568.5 |
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| CDS-3UTR CCA 90 bp | CATATTCTAGTCATCTCTGGCTTGTTCTTTCAGAGCCAAAGAGGAAACAGTGTATGGGCCCAACTGCTGTaGAATAGCAGAGATCACAGA | + |
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Preference number: 4 (lower is better) Translates to: HILVISGLFFQSQRGNSVWAQLL*NSRDHR Trigger: TCTGTGATCTCTGCTATTCCACAGCAGTTGGGCCCA...TACACTGTTTCCTCTTTGGCTCTGAAAGAACAAGCCAGAGATGACTAGAATATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099852.6 ENSMUST00000111568.5 |
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| CDS-3UTR TCA 90 bp | GAACCTCTACACAAACTACCATATTCTAGTCATCTCTGGCTTGTTCTTTCAGAGGGAGACAAGGACACCTaGGATGGTGCTCAATTCAAT | + |
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Preference number: 4 (lower is better) Translates to: EPLHKLPYSSHLWLVLSEGDKDT*DGAQFN Trigger: ATTGAATTGAGCACCATCTCAGGTGTCCTTGTCTCC...CTCTGAAAGAACAAGCCAGAGATGACTAGAATATGGTAGTTTGTGTAGAGGTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099852.6 ENSMUST00000111568.5 |
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| CDS-3UTR GCA 90 bp | TCTTTCAGAGCCAAAGAGGAAACAGTGTATCAAGATCTAGGGAACTGGGTGCAAGTCAAAGGCCATCACTaGCAGCAATATACATTCAGA | + |
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Preference number: 4 (lower is better) Translates to: SFRAKEETVYQDLGNWVQVKGHH*QQYTFR Trigger: TCTGAATGTATATTGCTGGCAGTGATGGCCTTTGAC...TTGCACCCAGTTCCCTAGATCTTGATACACTGTTTCCTCTTTGGCTCTGAAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099852.6 ENSMUST00000111568.5 |
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| CDS-3UTR TCA 90 bp | CTGGCTTGTTCTTTCAGAGCCAAAGAGGAAACAGTGTATCAAGATCTAGGGAACCCAGTAGAAATATTGTaGACAGAACCACTTTTACCT | + |
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Preference number: 4 (lower is better) Translates to: LACSFRAKEETVYQDLGNPVEIL*TEPLLP Trigger: AGGTAAAAGTGGTTCTGTTCACAATATTTCTACTGG...GTTCCCTAGATCTTGATACACTGTTTCCTCTTTGGCTCTGAAAGAACAAGCCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099852.6 ENSMUST00000111568.5 |
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| CDS-3UTR GCA 90 bp | CTACACAAACTACCATATTCTAGTCATCTCTGGCTTGTTCTTTCAGAGCCAAAGGTCAAAGGCCATCACTaGCAGCAATATACATTCAGA | + |
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Preference number: 4 (lower is better) Translates to: LHKLPYSSHLWLVLSEPKVKGHH*QQYTFR Trigger: TCTGAATGTATATTGCTGGCAGTGATGGCCTTTGAC...CTTTGGCTCTGAAAGAACAAGCCAGAGATGACTAGAATATGGTAGTTTGTGTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099852.6 ENSMUST00000111568.5 |
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| CDS-3UTR CCA 90 bp | CTGGCTTGTTCTTTCAGAGCCAAAGAGGAAACAGTGTATCAAGATCTAGGGAACAATGTCAATGTTGTATaGATCAAAGAGTCTGCCACA | + |
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Preference number: 4 (lower is better) Translates to: LACSFRAKEETVYQDLGNNVNVV*IKESAT Trigger: TGTGGCAGACTCTTTGATCCATACAACATTGACATT...GTTCCCTAGATCTTGATACACTGTTTCCTCTTTGGCTCTGAAAGAACAAGCCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099852.6 ENSMUST00000111568.5 |
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| CDS-3UTR CCA 90 bp | TCTGGCTTGTTCTTTCAGAGCCAAAGAGGAAACAGTGTATCAAGATCTAGGGAAAGGACAGTAGTAAGATaGGAGGGATATCACAAAAGA | + |
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Preference number: 4 (lower is better) Translates to: SGLFFQSQRGNSVSRSRERTVVR*EGYHKR Trigger: TCTTTTGTGATATCCCTCCCATCTTACTACTGTCCT...TTCCCTAGATCTTGATACACTGTTTCCTCTTTGGCTCTGAAAGAACAAGCCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099852.6 ENSMUST00000111568.5 |
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| CDS-3UTR CCA 90 bp | GAACCTCTACACAAACTACCATATTCTAGTCATCTCTGGCTTGTTCTTTCAGAGAAAAGCACAGTTCCTTaGAAAATCGCAACTGCAGTC | + |
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Preference number: 4 (lower is better) Translates to: EPLHKLPYSSHLWLVLSEKSTVP*KIATAV Trigger: GACTGCAGTTGCGATTTTCCAAGGAACTGTGCTTTT...CTCTGAAAGAACAAGCCAGAGATGACTAGAATATGGTAGTTTGTGTAGAGGTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099852.6 ENSMUST00000111568.5 |
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| CDS-3UTR CCA 90 bp | CTACACAAACTACCATATTCTAGTCATCTCTGGCTTGTTCTTTCAGAGCCAAAGAAAAGCACAGTTCCTTaGAAAATCGCAACTGCAGTC | + |
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Preference number: 4 (lower is better) Translates to: LHKLPYSSHLWLVLSEPKKSTVP*KIATAV Trigger: GACTGCAGTTGCGATTTTCCAAGGAACTGTGCTTTT...CTTTGGCTCTGAAAGAACAAGCCAGAGATGACTAGAATATGGTAGTTTGTGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099852.6 ENSMUST00000111568.5 |
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| CDS-3UTR TCA 90 bp | TCTGGCTTGTTCTTTCAGAGCCAAAGAGGAAACAGTGTATCAAGATCTAGGGAACCAGTAGAAATATTGTaGACAGAACCACTTTTACCT | + |
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Preference number: 4 (lower is better) Translates to: SGLFFQSQRGNSVSRSREPVEIL*TEPLLP Trigger: AGGTAAAAGTGGTTCTGTTCACAATATTTCTACTGG...TTCCCTAGATCTTGATACACTGTTTCCTCTTTGGCTCTGAAAGAACAAGCCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099852.6 ENSMUST00000111568.5 |
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| CDS-3UTR CCA 90 bp | TCTGGCTTGTTCTTTCAGAGCCAAAGAGGAAACAGTGTATCAAGATCTAGGGAAAATGTCAATGTTGTATaGATCAAAGAGTCTGCCACA | + |
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Preference number: 4 (lower is better) Translates to: SGLFFQSQRGNSVSRSRENVNVV*IKESAT Trigger: TGTGGCAGACTCTTTGATCCATACAACATTGACATT...TTCCCTAGATCTTGATACACTGTTTCCTCTTTGGCTCTGAAAGAACAAGCCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099852.6 ENSMUST00000111568.5 |
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| 3UTR CAA 72 bp | CTCTACACAAACTACCATATTCTAGTCATCTCTGGCTaGTTCTTTCAGAGCCAAAGAGGAAACAGTGTATCA | + |
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Preference number: 4 (lower is better) Translates to: LYTNYHILVISG*FFQSQRGNSVS Trigger: TGATACACTGTTTCCTCTTTGGCTCTGAAAGAACAAGCCAGAGATGACTAGAATATGGTAGTTTGTGTAGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099852.6 ENSMUST00000111568.5 |
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| CDS-3UTR CAA 90 bp | CTACACAAACTACCATATTCTAGTCATCTCTGGCTTGTTCTTTCAGAGCCAAAGCAGGTAGAGAAAGCTTaGAACCTGCCCCCAGCAGAG | + |
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Preference number: 5 (lower is better) Translates to: LHKLPYSSHLWLVLSEPKQVEKA*NLPPAE Trigger: CTCTGCTGGGGGCAGGTTCAAAGCTTTCTCTACCTG...CTTTGGCTCTGAAAGAACAAGCCAGAGATGACTAGAATATGGTAGTTTGTGTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099852.6 ENSMUST00000111568.5 |
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| CDS-3UTR CAA 90 bp | CTGGCTTGTTCTTTCAGAGCCAAAGAGGAAACAGTGTATCAAGATCTAGGGAACATGTCCATTAACATCTaGGGCCCAACTGCTGTGGAA | + |
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Preference number: 5 (lower is better) Translates to: LACSFRAKEETVYQDLGNMSINI*GPTAVE Trigger: TTCCACAGCAGTTGGGCCCAAGATGTTAATGGACAT...GTTCCCTAGATCTTGATACACTGTTTCCTCTTTGGCTCTGAAAGAACAAGCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099852.6 ENSMUST00000111568.5 |
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| CDS-3UTR CAA 90 bp | TCTGGCTTGTTCTTTCAGAGCCAAAGAGGAAACAGTGTATCAAGATCTAGGGAAATGTCCATTAACATCTaGGGCCCAACTGCTGTGGAA | + |
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Preference number: 5 (lower is better) Translates to: SGLFFQSQRGNSVSRSREMSINI*GPTAVE Trigger: TTCCACAGCAGTTGGGCCCAAGATGTTAATGGACAT...TTCCCTAGATCTTGATACACTGTTTCCTCTTTGGCTCTGAAAGAACAAGCCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099852.6 ENSMUST00000111568.5 |
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| CDS-3UTR CAA 90 bp | CTGGCTTGTTCTTTCAGAGCCAAAGAGGAAACAGTGTATCAAGATCTAGGGAACGAAAAGCACAGTTCCTaGGAAAATCGCAACTGCAGT | + |
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Preference number: 5 (lower is better) Translates to: LACSFRAKEETVYQDLGNEKHSS*ENRNCS Trigger: ACTGCAGTTGCGATTTTCCAAGGAACTGTGCTTTTC...GTTCCCTAGATCTTGATACACTGTTTCCTCTTTGGCTCTGAAAGAACAAGCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099852.6 ENSMUST00000111568.5 |
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| CDS-3UTR CAA 90 bp | GAACCTCTACACAAACTACCATATTCTAGTCATCTCTGGCTTGTTCTTTCAGAGGAAAAGCACAGTTCCTaGGAAAATCGCAACTGCAGT | + |
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Preference number: 5 (lower is better) Translates to: EPLHKLPYSSHLWLVLSEEKHSS*ENRNCS Trigger: ACTGCAGTTGCGATTTTCCAAGGAACTGTGCTTTTC...CTCTGAAAGAACAAGCCAGAGATGACTAGAATATGGTAGTTTGTGTAGAGGTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099852.6 ENSMUST00000111568.5 |
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| CDS-3UTR CAA 90 bp | TCTGGCTTGTTCTTTCAGAGCCAAAGAGGAAACAGTGTATCAAGATCTAGGGAAGGAGCTCATTTTGTCTaGATCCAGAGAATAAGAAGA | + |
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Preference number: 5 (lower is better) Translates to: SGLFFQSQRGNSVSRSREGAHFV*IQRIRR Trigger: TCTTCTTATTCTCTGGATCAAGACAAAATGAGCTCC...TTCCCTAGATCTTGATACACTGTTTCCTCTTTGGCTCTGAAAGAACAAGCCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099852.6 ENSMUST00000111568.5 |
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| CDS-3UTR CAA 90 bp | CATATTCTAGTCATCTCTGGCTTGTTCTTTCAGAGCCAAAGAGGAAACAGTGTAAATATTGCTAACTCATaGACCTGTGTATCTGAGCAG | + |
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Preference number: 5 (lower is better) Translates to: HILVISGLFFQSQRGNSVNIANS*TCVSEQ Trigger: CTGCTCAGATACACAGGTCAATGAGTTAGCAATATT...TACACTGTTTCCTCTTTGGCTCTGAAAGAACAAGCCAGAGATGACTAGAATATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099852.6 ENSMUST00000111568.5 |
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| CDS-3UTR CAA 90 bp | GAACCTCTACACAAACTACCATATTCTAGTCATCTCTGGCTTGTTCTTTCAGAGACTTTTACCTCAGAGTaGTTGGTAATTCCCATTAGT | + |
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Preference number: 5 (lower is better) Translates to: EPLHKLPYSSHLWLVLSETFTSE*LVIPIS Trigger: ACTAATGGGAATTACCAACAACTCTGAGGTAAAAGT...CTCTGAAAGAACAAGCCAGAGATGACTAGAATATGGTAGTTTGTGTAGAGGTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099852.6 ENSMUST00000111568.5 |
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| CDS-3UTR CAA 90 bp | CATATTCTAGTCATCTCTGGCTTGTTCTTTCAGAGCCAAAGAGGAAACAGTGTAACTTTTACCTCAGAGTaGTTGGTAATTCCCATTAGT | + |
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Preference number: 5 (lower is better) Translates to: HILVISGLFFQSQRGNSVTFTSE*LVIPIS Trigger: ACTAATGGGAATTACCAACAACTCTGAGGTAAAAGT...TACACTGTTTCCTCTTTGGCTCTGAAAGAACAAGCCAGAGATGACTAGAATATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099852.6 ENSMUST00000111568.5 |
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| CDS CAA 90 bp | GTGCTCAATTCAATGAACCCAAAAATTGTGAATATTGCTAACTCATaGACCTGTGTATCTGAGCAGGACAGTAGTAAGATGGGAGGGATA | + |
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Preference number: 6 (lower is better) Translates to: VLNSMNPKIVNIANS*TCVSEQDSSKMGGI Trigger: TATCCCTCCCATCTTACTACTGTCCTGCTCAGATACACAGGTCAATGAGTTAGCAATATTCACAATTTTTGGGTTCATTGAATTGAGCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090708.2 ENSMUST00000099852.6 ENSMUST00000111568.5 |
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| CDS CCA 72 bp | TTGATTTATCATTACCAAATATGTCCATTAACATCTTaGGCCCAACTGCTGTGGAATAGCAGAGATCACAGA | + |
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Preference number: 6 (lower is better) Translates to: LIYHYQICPLTS*AQLLWNSRDHR Trigger: TCTGTGATCTCTGCTATTCCACAGCAGTTGGGCCCAAGATGTTAATGGACATATTTGGTAATGATAAATCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090708.2 ENSMUST00000099852.6 ENSMUST00000111568.5 |
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| CDS CAA 72 bp | TCAATGAACCCAAAAATTGTGAATATTGCTAACTCATaGACCTGTGTATCTGAGCAGGACAGTAGTAAGATG | + |
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Preference number: 6 (lower is better) Translates to: SMNPKIVNIANS*TCVSEQDSSKM Trigger: CATCTTACTACTGTCCTGCTCAGATACACAGGTCAATGAGTTAGCAATATTCACAATTTTTGGGTTCATTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090708.2 ENSMUST00000099852.6 ENSMUST00000111568.5 |
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| CDS CAA 72 bp | TATCACAAGAATATAAAACAGGGAGCTCATTTTGTCTaGATCCAGAGAATAAGAAGAACTTGGCCGGAAATA | + |
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Preference number: 6 (lower is better) Translates to: YHKNIKQGAHFV*IQRIRRTWPEI Trigger: TATTTCCGGCCAAGTTCTTCTTATTCTCTGGATCAAGACAAAATGAGCTCCCTGTTTTATATTCTTGTGATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090708.2 ENSMUST00000099852.6 ENSMUST00000111568.5 |
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