Pregenerated sensors for OLFR114 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062629Ensembl transcript IDs: ENSMUST00000076914.4, ENSMUST00000214871.2, ENSMUST00000216249.2
Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS GCA 90 bp | GAGCCGACTAGGTATGTCACCAAGAAGAGCACAGCCTGTAAGATCTaGAGCTCATGGTTGTCAGAGAATCCCATGAGGAGGAATCCACTC | + |
Preference number: 5 (lower is better) Translates to: EPTRYVTKKSTACKI*SSWLSENPMRRNPL Trigger: GAGTGGATTCCTCCTCATGGGATTCTCTGACAACCATGAGCTGCAGATCTTACAGGCTGTGCTCTTCTTGGTGACATACCTAGTCGGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076914.4 ENSMUST00000214871.2 ENSMUST00000216249.2 |
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CDS GCA 72 bp | AAAATATGGTTGCTAGATATAGGGTTCCTGGAATACTaGTGCTTAGCCATACAGCTGTCACAGCCCACCTAC | + |
Preference number: 6 (lower is better) Translates to: KIWLLDIGFLEY*CLAIQLSQPTY Trigger: GTAGGTGGGCTGTGACAGCTGTATGGCTAAGCAGCAGTATTCCAGGAACCCTATATCTAGCAACCATATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076914.4 ENSMUST00000214871.2 ENSMUST00000216249.2 |
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CDS CCA 72 bp | GTCCAGAATGGAAAGTTGCTTCAGAAAGTAATACATTaGAGACTGGAGCTGTGGGTCCAGTGTTGTGATGGT | + |
Preference number: 6 (lower is better) Translates to: VQNGKLLQKVIH*RLELWVQCCDG Trigger: ACCATCACAACACTGGACCCACAGCTCCAGTCTCCAATGTATTACTTTCTGAAGCAACTTTCCATTCTGGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076914.4 ENSMUST00000214871.2 ENSMUST00000216249.2 |
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CDS TCA 72 bp | GATGACAATCCCAACGAAGCAGGCAAAACCTATTACTaGCAGGAAGTCAGCCACTCCCATTATTACAAGGTA | + |
Preference number: 6 (lower is better) Translates to: DDNPNEAGKTYY*QEVSHSHYYKV Trigger: TACCTTGTAATAATGGGAGTGGCTGACTTCCTGTCAGTAATAGGTTTTGCCTGCTTCGTTGGGATTGTCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076914.4 ENSMUST00000214871.2 ENSMUST00000216249.2 |