Pregenerated sensors for OLFR1130 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059205Ensembl transcript IDs: ENSMUST00000213103.3, ENSMUST00000216580.2
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTaGTCTCTCTCTCTCTCTGTGATAATATTATTCAATTATCTGAAA | + |
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Preference number: 1 (lower is better) Translates to: SLSLSLSLSLSLSLS*SLSLSVIILFNYLK Trigger: TTTCAGATAATTGAATAATATTATCACAGAGAGAGAGAGAGAGCAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| 3UTR TCA 90 bp | TATTATATATTCATGGCTGTATGTTTGTGTGCATTTATCTACACTTaGCTGTTACTACAAAAAGAGGCCAGAAAAAGCAAGACTGTCTGC | + |
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Preference number: 1 (lower is better) Translates to: YYIFMAVCLCAFIYT*LLLQKEARKSKTVC Trigger: GCAGACAGTCTTGCTTTTTCTGGCCTCTTTTTGTAGTAACAGTCAAGTGTAGATAAATGCACACAAACATACAGCCATGAATATATAATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| 3UTR GCA 90 bp | GTCACAAAGCTTGCACAACAAATGTGTTTATCTGCTGAGTCTTCTTaGCAAAAACTCTGGTTCTTTCGTAAATTATTATATATTCATGGC | + |
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Preference number: 1 (lower is better) Translates to: VTKLAQQMCLSAESS*QKLWFFRKLLYIHG Trigger: GCCATGAATATATAATAATTTACGAAAGAACCAGAGTTTTTGGCAAGAAGACTCAGCAGATAAACACATTTGTTGTGCAAGCTTTGTGAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| 3UTR-3UTR CCA 90 bp | GACTGTCTGCAGCTAATTATAGGCAAAGGTGAGCAACATTGCTTAGGTGGAGGGTATCTGAAACTAAACTaGCCACAGAGAAGGTCCATC | + |
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Preference number: 2 (lower is better) Translates to: DCLQLIIGKGEQHCLGGGYLKLN*PQRRSI Trigger: GATGGACCTTCTCTGTGGCCAGTTTAGTTTCAGATA...CCCTCCACCTAAGCAATGTTGCTCACCTTTGCCTATAATTAGCTGCAGACAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| 3UTR-3UTR TCA 90 bp | GACTGTCTGCAGCTAATTATAGGCAAAGGTGAGCAACATTGCTTAGGTGGAGGGCTGATTATACTCCCATaGGAAGAACAAAAGCTGATG | + |
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Preference number: 2 (lower is better) Translates to: DCLQLIIGKGEQHCLGGGLIILP*EEQKLM Trigger: CATCAGCTTTTGTTCTTCTCATGGGAGTATAATCAG...CCCTCCACCTAAGCAATGTTGCTCACCTTTGCCTATAATTAGCTGCAGACAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| 3UTR-3UTR TCA 90 bp | GACTGTCTGCAGCTAATTATAGGCAAAGGTGAGCAACATTGCTTAGGTGGAGGGCCGAGGTTATATGATTaGATCAAAAGCTTTCTTACC | + |
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Preference number: 2 (lower is better) Translates to: DCLQLIIGKGEQHCLGGGPRLYD*IKSFLT Trigger: GGTAAGAAAGCTTTTGATTCAATCATATAACCTCGG...CCCTCCACCTAAGCAATGTTGCTCACCTTTGCCTATAATTAGCTGCAGACAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| 3UTR-3UTR CCA 90 bp | ACTACAAAAAGAGGCCAGAAAAAGCAAGACTGTCTGCAGCTAATTATAGGCAAAGCAACATTGCTTAGGTaGAGGGACTTGAACTCAGGT | + |
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Preference number: 2 (lower is better) Translates to: TTKRGQKKQDCLQLIIGKATLLR*RDLNSG Trigger: ACCTGAGTTCAAGTCCCTCCACCTAAGCAATGTTGC...TTTGCCTATAATTAGCTGCAGACAGTCTTGCTTTTTCTGGCCTCTTTTTGTAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| 3UTR-3UTR CCA 90 bp | TTCTACATTTCTATGTGTCCTAGGAACTCAGGTCACAAAGCTTGCACAACAAATGCAACATTGCTTAGGTaGAGGGACTTGAACTCAGGT | + |
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Preference number: 2 (lower is better) Translates to: FYISMCPRNSGHKACTTNATLLR*RDLNSG Trigger: ACCTGAGTTCAAGTCCCTCCACCTAAGCAATGTTGC...ATTTGTTGTGCAAGCTTTGTGACCTGAGTTCCTAGGACACATAGAAATGTAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| 3UTR CAA 90 bp | CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTaGCTCTCTCTCTCTCTCTGTGATAATATTATTCAATTATCTGAA | + |
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Preference number: 2 (lower is better) Translates to: LSLSLSLSLSLSLSL*LSLSLCDNIIQLSE Trigger: TTCAGATAATTGAATAATATTATCACAGAGAGAGAGAGAGAGCAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| 3UTR-3UTR TCA 90 bp | AGCTTGCACAACAAATGTGTTTATCTGCTGAGTCTTCTTGCCAAAAACTCTGGTCTGATTATACTCCCATaGGAAGAACAAAAGCTGATG | + |
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Preference number: 2 (lower is better) Translates to: SLHNKCVYLLSLLAKNSGLIILP*EEQKLM Trigger: CATCAGCTTTTGTTCTTCTCATGGGAGTATAATCAG...ACCAGAGTTTTTGGCAAGAAGACTCAGCAGATAAACACATTTGTTGTGCAAGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| 3UTR-3UTR TCA 90 bp | CTTGCACAACAAATGTGTTTATCTGCTGAGTCTTCTTGCCAAAAACTCTGGTTCGACAAACATGTCTTTTaGAATGCCAGAATGTTGGGT | + |
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Preference number: 2 (lower is better) Translates to: LAQQMCLSAESSCQKLWFDKHVF*NARMLG Trigger: ACCCAACATTCTGGCATTTCAAAAGACATGTTTGTC...GAACCAGAGTTTTTGGCAAGAAGACTCAGCAGATAAACACATTTGTTGTGCAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| 3UTR-3UTR TCA 90 bp | GTGCATACCTGTGCTCTAACAGAAGCCAAAAGAGCATATCAGTTTTCCTTCAGTCCGAGGTTATATGATTaGATCAAAAGCTTTCTTACC | + |
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Preference number: 2 (lower is better) Translates to: VHTCALTEAKRAYQFSFSPRLYD*IKSFLT Trigger: GGTAAGAAAGCTTTTGATTCAATCATATAACCTCGG...ACTGAAGGAAAACTGATATGCTCTTTTGGCTTCTGTTAGAGCACAGGTATGCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| 3UTR-3UTR CCA 90 bp | GTTACTACAAAAAGAGGCCAGAAAAAGCAAGACTGTCTGCAGCTAATTATAGGCGAAATGCCAGAATGTTaGGTGCAACTGATTGAAGTT | + |
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Preference number: 2 (lower is better) Translates to: VTTKRGQKKQDCLQLIIGEMPEC*VQLIEV Trigger: AACTTCAATCAGTTGCACCCAACATTCTGGCATTTC...GCCTATAATTAGCTGCAGACAGTCTTGCTTTTTCTGGCCTCTTTTTGTAGTAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| 3UTR-3UTR TCA 90 bp | GTTACTACAAAAAGAGGCCAGAAAAAGCAAGACTGTCTGCAGCTAATTATAGGCAAAAGGGAAAGAAATTaGCACCACAATGTACTGTCA | + |
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Preference number: 2 (lower is better) Translates to: VTTKRGQKKQDCLQLIIGKRERN*HHNVLS Trigger: TGACAGTACATTGTGGTGTCAATTTCTTTCCCTTTT...GCCTATAATTAGCTGCAGACAGTCTTGCTTTTTCTGGCCTCTTTTTGTAGTAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| 3UTR-3UTR GCA 90 bp | TCATGGCTGTATGTTTGTGTGCATTTATCTACACTTGACTGTTACTACAAAAAGGGAAGTGCATACCTGTaGTCTAACAGAAGCCAAAAG | + |
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Preference number: 2 (lower is better) Translates to: SWLYVCVHLSTLDCYYKKGSAYL*SNRSQK Trigger: CTTTTGGCTTCTGTTAGAGCACAGGTATGCACTTCC...CTTTTTGTAGTAACAGTCAAGTGTAGATAAATGCACACAAACATACAGCCATGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| 3UTR-3UTR GCA 90 bp | CTTGCACAACAAATGTGTTTATCTGCTGAGTCTTCTTGCCAAAAACTCTGGTTCGGCTGTATGTTTGTGTaGATTTATCTACACTTGACT | + |
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Preference number: 2 (lower is better) Translates to: LAQQMCLSAESSCQKLWFGCMFV*IYLHLT Trigger: AGTCAAGTGTAGATAAATGCACACAAACATACAGCC...GAACCAGAGTTTTTGGCAAGAAGACTCAGCAGATAAACACATTTGTTGTGCAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| 3UTR-3UTR TCA 90 bp | GAAACTAAACTGGCCACAGAGAAGGTCCATCTTATATTGATTCTCACAATACTGGAGAAGAACAAAAGCTaGTGCTTTTCTTCAGTAACT | + |
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Preference number: 2 (lower is better) Translates to: ETKLATEKVHLILILTILEKNKS*CFSSVT Trigger: AGTTACTGAAGAAAAGCATCAGCTTTTGTTCTTCTC...CAGTATTGTGAGAATCAATATAAGATGGACCTTCTCTGTGGCCAGTTTAGTTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| 3UTR-3UTR TCA 90 bp | TTCTACATTTCTATGTGTCCTAGGAACTCAGGTCACAAAGCTTGCACAACAAATGAGAAGAACAAAAGCTaGTGCTTTTCTTCAGTAACT | + |
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Preference number: 2 (lower is better) Translates to: FYISMCPRNSGHKACTTNEKNKS*CFSSVT Trigger: AGTTACTGAAGAAAAGCATCAGCTTTTGTTCTTCTC...ATTTGTTGTGCAAGCTTTGTGACCTGAGTTCCTAGGACACATAGAAATGTAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| 3UTR-3UTR TCA 90 bp | TTCTACATTTCTATGTGTCCTAGGAACTCAGGTCACAAAGCTTGCACAACAAATGTTAAATGCAATAACTaGGTGATCACGAATCTTGTG | + |
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Preference number: 2 (lower is better) Translates to: FYISMCPRNSGHKACTTNVKCNN*VITNLV Trigger: CACAAGATTCGTGATCACTCAGTTATTGCATTTAAC...ATTTGTTGTGCAAGCTTTGTGACCTGAGTTCCTAGGACACATAGAAATGTAGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| 3UTR-3UTR GCA 90 bp | CTTGCACAACAAATGTGTTTATCTGCTGAGTCTTCTTGCCAAAAACTCTGGTTCAACCATCTTATCATCTaGCCGTTACAACTTTGTTTT | + |
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Preference number: 2 (lower is better) Translates to: LAQQMCLSAESSCQKLWFNHLII*PLQLCF Trigger: AAAACAAAGTTGTAACGGGCAGATGATAAGATGGTT...GAACCAGAGTTTTTGGCAAGAAGACTCAGCAGATAAACACATTTGTTGTGCAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| 3UTR-3UTR GCA 90 bp | GGCCACAGAGAAGGTCCATCTTATATTGATTCTCACAATACTGGAGCTATAGTAAACCATCTTATCATCTaGCCGTTACAACTTTGTTTT | + |
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Preference number: 2 (lower is better) Translates to: GHREGPSYIDSHNTGAIVNHLII*PLQLCF Trigger: AAAACAAAGTTGTAACGGGCAGATGATAAGATGGTT...TACTATAGCTCCAGTATTGTGAGAATCAATATAAGATGGACCTTCTCTGTGGCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| 3UTR-3UTR CCA 90 bp | TCATGGCTGTATGTTTGTGTGCATTTATCTACACTTGACTGTTACTACAAAAAGTATCTGAAACTAAACTaGCCACAGAGAAGGTCCATC | + |
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Preference number: 2 (lower is better) Translates to: SWLYVCVHLSTLDCYYKKYLKLN*PQRRSI Trigger: GATGGACCTTCTCTGTGGCCAGTTTAGTTTCAGATA...CTTTTTGTAGTAACAGTCAAGTGTAGATAAATGCACACAAACATACAGCCATGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| 3UTR-3UTR CCA 90 bp | CTTGCACAACAAATGTGTTTATCTGCTGAGTCTTCTTGCCAAAAACTCTGGTTCTTTTTAATGACTAAATaGAAGTGCATACCTGTGCTC | + |
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Preference number: 2 (lower is better) Translates to: LAQQMCLSAESSCQKLWFFLMTK*KCIPVL Trigger: GAGCACAGGTATGCACTTCCATTTAGTCATTAAAAA...GAACCAGAGTTTTTGGCAAGAAGACTCAGCAGATAAACACATTTGTTGTGCAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| 3UTR-3UTR TCA 90 bp | TCTGTGATAATATTATTCAATTATCTGAAACTAAACTGGCCACAGAGAAGGTCCGACAAACATGTCTTTTaGAATGCCAGAATGTTGGGT | + |
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Preference number: 2 (lower is better) Translates to: SVIILFNYLKLNWPQRRSDKHVF*NARMLG Trigger: ACCCAACATTCTGGCATTTCAAAAGACATGTTTGTC...GGACCTTCTCTGTGGCCAGTTTAGTTTCAGATAATTGAATAATATTATCACAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| 3UTR-3UTR GCA 90 bp | TCATGGCTGTATGTTTGTGTGCATTTATCTACACTTGACTGTTACTACAAAAAGACATGTCTTTTGAAATaGCAGAATGTTGGGTGCAAC | + |
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Preference number: 2 (lower is better) Translates to: SWLYVCVHLSTLDCYYKKTCLLK*QNVGCN Trigger: GTTGCACCCAACATTCTGGCATTTCAAAAGACATGT...CTTTTTGTAGTAACAGTCAAGTGTAGATAAATGCACACAAACATACAGCCATGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| 3UTR-3UTR CCA 90 bp | TCTGTGATAATATTATTCAATTATCTGAAACTAAACTGGCCACAGAGAAGGTCCGAAATGCCAGAATGTTaGGTGCAACTGATTGAAGTT | + |
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Preference number: 2 (lower is better) Translates to: SVIILFNYLKLNWPQRRSEMPEC*VQLIEV Trigger: AACTTCAATCAGTTGCACCCAACATTCTGGCATTTC...GGACCTTCTCTGTGGCCAGTTTAGTTTCAGATAATTGAATAATATTATCACAGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| 3UTR TCA 72 bp | AAAGCAAGACTGTCTGCAGCTAATTATAGGCAAAGGTaGGCAACATTGCTTAGGTGGAGGGACTTGAACTCA | + |
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Preference number: 3 (lower is better) Translates to: KARLSAANYRQR*ATLLRWRDLNS Trigger: TGAGTTCAAGTCCCTCCACCTAAGCAATGTTGCTCACCTTTGCCTATAATTAGCTGCAGACAGTCTTGCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| 3UTR GCA 72 bp | CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTaGTCTCTCTCTCTCTCTGTGATAATATTATTCAAT | + |
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Preference number: 3 (lower is better) Translates to: LSLSLSLSLSLS*SLSLSVIILFN Trigger: ATTGAATAATATTATCACAGAGAGAGAGAGAGAGCAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| 3UTR-3UTR CAA 90 bp | CTTGCACAACAAATGTGTTTATCTGCTGAGTCTTCTTGCCAAAAACTCTGGTTCTGGAGCTATAGTAACTaGTATTGTCTTGCCCATATT | + |
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Preference number: 3 (lower is better) Translates to: LAQQMCLSAESSCQKLWFWSYSN*YCLAHI Trigger: AATATGGGCAAGACAATACAAGTTACTATAGCTCCA...GAACCAGAGTTTTTGGCAAGAAGACTCAGCAGATAAACACATTTGTTGTGCAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| 3UTR-3UTR CAA 90 bp | AGCTTGCACAACAAATGTGTTTATCTGCTGAGTCTTCTTGCCAAAAACTCTGGTAAGGTCCATCTTATATaGATTCTCACAATACTGGAG | + |
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Preference number: 3 (lower is better) Translates to: SLHNKCVYLLSLLAKNSGKVHLI*ILTILE Trigger: CTCCAGTATTGTGAGAATCAATATAAGATGGACCTT...ACCAGAGTTTTTGGCAAGAAGACTCAGCAGATAAACACATTTGTTGTGCAAGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| 3UTR-3UTR CAA 90 bp | AGCTTGCACAACAAATGTGTTTATCTGCTGAGTCTTCTTGCCAAAAACTCTGGTTTCATGGCTGTATGTTaGTGTGCATTTATCTACACT | + |
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Preference number: 3 (lower is better) Translates to: SLHNKCVYLLSLLAKNSGFMAVC*CAFIYT Trigger: AGTGTAGATAAATGCACACAAACATACAGCCATGAA...ACCAGAGTTTTTGGCAAGAAGACTCAGCAGATAAACACATTTGTTGTGCAAGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| 3UTR-3UTR CAA 90 bp | TTCTACATTTCTATGTGTCCTAGGAACTCAGGTCACAAAGCTTGCACAACAAATTTCATGGCTGTATGTTaGTGTGCATTTATCTACACT | + |
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Preference number: 3 (lower is better) Translates to: FYISMCPRNSGHKACTTNFMAVC*CAFIYT Trigger: AGTGTAGATAAATGCACACAAACATACAGCCATGAA...ATTTGTTGTGCAAGCTTTGTGACCTGAGTTCCTAGGACACATAGAAATGTAGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| CDS-3UTR TCA 90 bp | GACTGTCTGCAGCTAATTATAGGCAAAGGTGAGCAACATTGCTTAGGTGGAGGGCTCCGCAGGCCAGCTTaGGAATGGGTGGTATGTCAC | + |
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Preference number: 4 (lower is better) Translates to: DCLQLIIGKGEQHCLGGGLRRPA*EWVVCH Trigger: GTGACATACCACCCATTCTCAAGCTGGCCTGCGGAG...CCCTCCACCTAAGCAATGTTGCTCACCTTTGCCTATAATTAGCTGCAGACAGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| CDS-3UTR TCA 90 bp | GACTGTCTGCAGCTAATTATAGGCAAAGGTGAGCAACATTGCTTAGGTGGAGGGGTGGGAAGAACATGTTaGGAAGGCTTTTGCCCGTCC | + |
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Preference number: 4 (lower is better) Translates to: DCLQLIIGKGEQHCLGGGVGRTC*EGFCPS Trigger: GGACGGGCAAAAGCCTTCTCAACATGTTCTTCCCAC...CCCTCCACCTAAGCAATGTTGCTCACCTTTGCCTATAATTAGCTGCAGACAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| CDS-3UTR TCA 90 bp | GACTGTCTGCAGCTAATTATAGGCAAAGGTGAGCAACATTGCTTAGGTGGAGGGACTGGGTGGCACAGCTaGGGACAGAAATCTTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: DCLQLIIGKGEQHCLGGGTGWHS*GQKSFS Trigger: AGAGAAAGATTTCTGTCCTCAGCTGTGCCACCCAGT...CCCTCCACCTAAGCAATGTTGCTCACCTTTGCCTATAATTAGCTGCAGACAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| CDS-3UTR CCA 90 bp | GACTGTCTGCAGCTAATTATAGGCAAAGGTGAGCAACATTGCTTAGGTGGAGGGAGGAAGAAACACAACTaGGTGGCACAGCTGAGGACA | + |
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Preference number: 4 (lower is better) Translates to: DCLQLIIGKGEQHCLGGGRKKHN*VAQLRT Trigger: TGTCCTCAGCTGTGCCACCCAGTTGTGTTTCTTCCT...CCCTCCACCTAAGCAATGTTGCTCACCTTTGCCTATAATTAGCTGCAGACAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| CDS-3UTR TCA 90 bp | CTTGCACAACAAATGTGTTTATCTGCTGAGTCTTCTTGCCAAAAACTCTGGTTCCTCCGCAGGCCAGCTTaGGAATGGGTGGTATGTCAC | + |
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Preference number: 4 (lower is better) Translates to: LAQQMCLSAESSCQKLWFLRRPA*EWVVCH Trigger: GTGACATACCACCCATTCTCAAGCTGGCCTGCGGAG...GAACCAGAGTTTTTGGCAAGAAGACTCAGCAGATAAACACATTTGTTGTGCAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| CDS-3UTR GCA 90 bp | GTTACTACAAAAAGAGGCCAGAAAAAGCAAGACTGTCTGCAGCTAATTATAGGCAAGCCAGGAGGCTGCTaGCAGCTGAGTGCACTTTGT | + |
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Preference number: 4 (lower is better) Translates to: VTTKRGQKKQDCLQLIIGKPGGC*QLSALC Trigger: ACAAAGTGCACTCAGCTGGCAGCAGCCTCCTGGCTT...GCCTATAATTAGCTGCAGACAGTCTTGCTTTTTCTGGCCTCTTTTTGTAGTAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| CDS-3UTR GCA 90 bp | GGCCACAGAGAAGGTCCATCTTATATTGATTCTCACAATACTGGAGCTATAGTAAAGCCAGGAGGCTGCTaGCAGCTGAGTGCACTTTGT | + |
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Preference number: 4 (lower is better) Translates to: GHREGPSYIDSHNTGAIVKPGGC*QLSALC Trigger: ACAAAGTGCACTCAGCTGGCAGCAGCCTCCTGGCTT...TACTATAGCTCCAGTATTGTGAGAATCAATATAAGATGGACCTTCTCTGTGGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| CDS-3UTR TCA 90 bp | CTTGCACAACAAATGTGTTTATCTGCTGAGTCTTCTTGCCAAAAACTCTGGTTCGTGGGAAGAACATGTTaGGAAGGCTTTTGCCCGTCC | + |
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Preference number: 4 (lower is better) Translates to: LAQQMCLSAESSCQKLWFVGRTC*EGFCPS Trigger: GGACGGGCAAAAGCCTTCTCAACATGTTCTTCCCAC...GAACCAGAGTTTTTGGCAAGAAGACTCAGCAGATAAACACATTTGTTGTGCAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| CDS-3UTR GCA 90 bp | TCATGGCTGTATGTTTGTGTGCATTTATCTACACTTGACTGTTACTACAAAAAGCTATCTGGACTGGGATaGCTCCAAGCCAGGAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: SWLYVCVHLSTLDCYYKKLSGLG*LQARRL Trigger: CAGCCTCCTGGCTTGGAGGCATCCCAGTCCAGATAG...CTTTTTGTAGTAACAGTCAAGTGTAGATAAATGCACACAAACATACAGCCATGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| CDS-3UTR TCA 90 bp | ACTACAAAAAGAGGCCAGAAAAAGCAAGACTGTCTGCAGCTAATTATAGGCAAAACTGGGTGGCACAGCTaGGGACAGAAATCTTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: TTKRGQKKQDCLQLIIGKTGWHS*GQKSFS Trigger: AGAGAAAGATTTCTGTCCTCAGCTGTGCCACCCAGT...TTTGCCTATAATTAGCTGCAGACAGTCTTGCTTTTTCTGGCCTCTTTTTGTAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| CDS-3UTR CCA 90 bp | GTTACTACAAAAAGAGGCCAGAAAAAGCAAGACTGTCTGCAGCTAATTATAGGCGAAACTCTGTCACAGTaGAAGCATTATCCTCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: VTTKRGQKKQDCLQLIIGETLSQ*KHYPLP Trigger: GGGCAGAGGATAATGCTTCCACTGTGACAGAGTTTC...GCCTATAATTAGCTGCAGACAGTCTTGCTTTTTCTGGCCTCTTTTTGTAGTAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| CDS-3UTR CCA 90 bp | AGCTTGCACAACAAATGTGTTTATCTGCTGAGTCTTCTTGCCAAAAACTCTGGTGAAACTCTGTCACAGTaGAAGCATTATCCTCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: SLHNKCVYLLSLLAKNSGETLSQ*KHYPLP Trigger: GGGCAGAGGATAATGCTTCCACTGTGACAGAGTTTC...ACCAGAGTTTTTGGCAAGAAGACTCAGCAGATAAACACATTTGTTGTGCAAGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| CDS-3UTR CCA 90 bp | TTCTACATTTCTATGTGTCCTAGGAACTCAGGTCACAAAGCTTGCACAACAAATAGGAAGAAACACAACTaGGTGGCACAGCTGAGGACA | + |
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Preference number: 4 (lower is better) Translates to: FYISMCPRNSGHKACTTNRKKHN*VAQLRT Trigger: TGTCCTCAGCTGTGCCACCCAGTTGTGTTTCTTCCT...ATTTGTTGTGCAAGCTTTGTGACCTGAGTTCCTAGGACACATAGAAATGTAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| CDS-3UTR TCA 90 bp | AGCTTGCACAACAAATGTGTTTATCTGCTGAGTCTTCTTGCCAAAAACTCTGGTCCTAGGGAGAGTGACTaGAACATAACAGATTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLHNKCVYLLSLLAKNSGPRESD*NITDFQ Trigger: CTGGAAATCTGTTATGTTTCAGTCACTCTCCCTAGG...ACCAGAGTTTTTGGCAAGAAGACTCAGCAGATAAACACATTTGTTGTGCAAGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| CDS-3UTR TCA 90 bp | CTTGCACAACAAATGTGTTTATCTGCTGAGTCTTCTTGCCAAAAACTCTGGTTCACTTTGTTGGGTTCATaGCCAAAGGATAGTGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: LAQQMCLSAESSCQKLWFTLLGS*PKDSAE Trigger: CTCTGCACTATCCTTTGGTCATGAACCCAACAAAGT...GAACCAGAGTTTTTGGCAAGAAGACTCAGCAGATAAACACATTTGTTGTGCAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| CDS-3UTR CCA 90 bp | TCTGTGATAATATTATTCAATTATCTGAAACTAAACTGGCCACAGAGAAGGTCCCAGGTTTGTCCTATCTaGACTGGGATGCCTCCAAGC | + |
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Preference number: 4 (lower is better) Translates to: SVIILFNYLKLNWPQRRSQVCPI*TGMPPS Trigger: GCTTGGAGGCATCCCAGTCCAGATAGGACAAACCTG...GGACCTTCTCTGTGGCCAGTTTAGTTTCAGATAATTGAATAATATTATCACAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| CDS-3UTR CCA 90 bp | GACTGTCTGCAGCTAATTATAGGCAAAGGTGAGCAACATTGCTTAGGTGGAGGGATGTCACACAAGAAGTaGTTGATTTGGTTAGAATTG | + |
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Preference number: 4 (lower is better) Translates to: DCLQLIIGKGEQHCLGGGMSHKK*LIWLEL Trigger: CAATTCTAACCAAATCAACCACTTCTTGTGTGACAT...CCCTCCACCTAAGCAATGTTGCTCACCTTTGCCTATAATTAGCTGCAGACAGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| 3UTR CAA 72 bp | TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTaGCTCTCTCTCTCTCTCTGTGATAATATTATTCAA | + |
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Preference number: 4 (lower is better) Translates to: SLSLSLSLSLSL*LSLSLCDNIIQ Trigger: TTGAATAATATTATCACAGAGAGAGAGAGAGAGCAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| CDS-3UTR TCA 90 bp | GAAACTAAACTGGCCACAGAGAAGGTCCATCTTATATTGATTCTCACAATACTGCCTAGGGAGAGTGACTaGAACATAACAGATTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: ETKLATEKVHLILILTILPRESD*NITDFQ Trigger: CTGGAAATCTGTTATGTTTCAGTCACTCTCCCTAGG...CAGTATTGTGAGAATCAATATAAGATGGACCTTCTCTGTGGCCAGTTTAGTTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| CDS-3UTR TCA 90 bp | AGCTTGCACAACAAATGTGTTTATCTGCTGAGTCTTCTTGCCAAAAACTCTGGTTCAGAATGGTGGCAATaGTTTTGCCATAAGATGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SLHNKCVYLLSLLAKNSGSEWWQ*FCHKMQ Trigger: TTGCATCTTATGGCAAAATCATTGCCACCATTCTGA...ACCAGAGTTTTTGGCAAGAAGACTCAGCAGATAAACACATTTGTTGTGCAAGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| CDS-3UTR CCA 90 bp | GAAACTAAACTGGCCACAGAGAAGGTCCATCTTATATTGATTCTCACAATACTGAACACCACAAGCAAGTaGGAAGAACATGTTGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ETKLATEKVHLILILTILNTTSK*EEHVEK Trigger: CTTCTCAACATGTTCTTCCCACTTGCTTGTGGTGTT...CAGTATTGTGAGAATCAATATAAGATGGACCTTCTCTGTGGCCAGTTTAGTTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| CDS-3UTR TCA 90 bp | TTCTACATTTCTATGTGTCCTAGGAACTCAGGTCACAAAGCTTGCACAACAAATTCAGAATGGTGGCAATaGTTTTGCCATAAGATGCAA | + |
|
Preference number: 4 (lower is better) Translates to: FYISMCPRNSGHKACTTNSEWWQ*FCHKMQ Trigger: TTGCATCTTATGGCAAAATCATTGCCACCATTCTGA...ATTTGTTGTGCAAGCTTTGTGACCTGAGTTCCTAGGACACATAGAAATGTAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| CDS-3UTR GCA 90 bp | TTCTACATTTCTATGTGTCCTAGGAACTCAGGTCACAAAGCTTGCACAACAAATGGAAGCATTATCCTCTaGCCTGATTTCTGTGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: FYISMCPRNSGHKACTTNGSIIL*PDFCEF Trigger: AAATTCACAGAAATCAGGGCAGAGGATAATGCTTCC...ATTTGTTGTGCAAGCTTTGTGACCTGAGTTCCTAGGACACATAGAAATGTAGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| CDS-3UTR GCA 90 bp | ACTACAAAAAGAGGCCAGAAAAAGCAAGACTGTCTGCAGCTAATTATAGGCAAAGGAAGCATTATCCTCTaGCCTGATTTCTGTGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: TTKRGQKKQDCLQLIIGKGSIIL*PDFCEF Trigger: AAATTCACAGAAATCAGGGCAGAGGATAATGCTTCC...TTTGCCTATAATTAGCTGCAGACAGTCTTGCTTTTTCTGGCCTCTTTTTGTAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| CDS-3UTR CCA 90 bp | TCATGGCTGTATGTTTGTGTGCATTTATCTACACTTGACTGTTACTACAAAAAGAACACCACAAGCAAGTaGGAAGAACATGTTGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SWLYVCVHLSTLDCYYKKNTTSK*EEHVEK Trigger: CTTCTCAACATGTTCTTCCCACTTGCTTGTGGTGTT...CTTTTTGTAGTAACAGTCAAGTGTAGATAAATGCACACAAACATACAGCCATGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| CDS-3UTR CCA 90 bp | TTCTACATTTCTATGTGTCCTAGGAACTCAGGTCACAAAGCTTGCACAACAAATTCAGAGGATTTAACATaGGAGTCACAATGCTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: FYISMCPRNSGHKACTTNSEDLT*ESQCCK Trigger: TTTACAGCATTGTGACTCCCATGTTAAATCCTCTGA...ATTTGTTGTGCAAGCTTTGTGACCTGAGTTCCTAGGACACATAGAAATGTAGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| CDS-3UTR CCA 90 bp | TCTGTGATAATATTATTCAATTATCTGAAACTAAACTGGCCACAGAGAAGGTCCTCAGAGGATTTAACATaGGAGTCACAATGCTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: SVIILFNYLKLNWPQRRSSEDLT*ESQCCK Trigger: TTTACAGCATTGTGACTCCCATGTTAAATCCTCTGA...GGACCTTCTCTGTGGCCAGTTTAGTTTCAGATAATTGAATAATATTATCACAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| CDS TCA 90 bp | AAACACAACTGGGTGGCACAGCTGAGGACAGAAATCTTTCTCTCTTaGGTAGCAATGCTAAACAGAATCCTAGGGAGAGTGACTGAAACA | + |
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Preference number: 5 (lower is better) Translates to: KHNWVAQLRTEIFLS*VAMLNRILGRVTET Trigger: TGTTTCAGTCACTCTCCCTAGGATTCTGTTTAGCATTGCTACTCAAGAGAGAAAGATTTCTGTCCTCAGCTGTGCCACCCAGTTGTGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| CDS-3UTR CAA 90 bp | TTCTACATTTCTATGTGTCCTAGGAACTCAGGTCACAAAGCTTGCACAACAAATATGTTGAGAAGGCTTTaGCCCGTCCTGTGGCTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: FYISMCPRNSGHKACTTNMLRRL*PVLWLL Trigger: CAACAGCCACAGGACGGGCAAAAGCCTTCTCAACAT...ATTTGTTGTGCAAGCTTTGTGACCTGAGTTCCTAGGACACATAGAAATGTAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| CDS-3UTR CAA 90 bp | GACTGTCTGCAGCTAATTATAGGCAAAGGTGAGCAACATTGCTTAGGTGGAGGGCAAGAAGTGGTTGATTaGGTTAGAATTGCAGAAATG | + |
|
Preference number: 5 (lower is better) Translates to: DCLQLIIGKGEQHCLGGGQEVVD*VRIAEM Trigger: CATTTCTGCAATTCTAACCAAATCAACCACTTCTTG...CCCTCCACCTAAGCAATGTTGCTCACCTTTGCCTATAATTAGCTGCAGACAGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| CDS-3UTR CAA 90 bp | GTTACTACAAAAAGAGGCCAGAAAAAGCAAGACTGTCTGCAGCTAATTATAGGCAACAGAGAGAATAGTTaGTCAGTTCCTGGAGAATGG | + |
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Preference number: 5 (lower is better) Translates to: VTTKRGQKKQDCLQLIIGNRENS*SVPGEW Trigger: CCATTCTCCAGGAACTGACAAACTATTCTCTCTGTT...GCCTATAATTAGCTGCAGACAGTCTTGCTTTTTCTGGCCTCTTTTTGTAGTAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| CDS-3UTR CAA 90 bp | ACTACAAAAAGAGGCCAGAAAAAGCAAGACTGTCTGCAGCTAATTATAGGCAAAAACAGAGAGAATAGTTaGTCAGTTCCTGGAGAATGG | + |
|
Preference number: 5 (lower is better) Translates to: TTKRGQKKQDCLQLIIGKNRENS*SVPGEW Trigger: CCATTCTCCAGGAACTGACAAACTATTCTCTCTGTT...TTTGCCTATAATTAGCTGCAGACAGTCTTGCTTTTTCTGGCCTCTTTTTGTAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| CDS-3UTR CAA 90 bp | GTTACTACAAAAAGAGGCCAGAAAAAGCAAGACTGTCTGCAGCTAATTATAGGCAGAAATCTTTCTCTCTaGAGTAGCAATGCTAAACAG | + |
|
Preference number: 5 (lower is better) Translates to: VTTKRGQKKQDCLQLIIGRNLSL*SSNAKQ Trigger: CTGTTTAGCATTGCTACTCAAGAGAGAAAGATTTCT...GCCTATAATTAGCTGCAGACAGTCTTGCTTTTTCTGGCCTCTTTTTGTAGTAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| CDS TCA 90 bp | TCTCTCTTGAGTAGCAATGCTAAACAGAATCCTAGGGAGAGTGACTaGAACATAACAGATTTCCAGAGAAGAAAAATTTGCCAGGAAAAA | + |
|
Preference number: 5 (lower is better) Translates to: SLLSSNAKQNPRESD*NITDFQRRKICQEK Trigger: TTTTTCCTGGCAAATTTTTCTTCTCTGGAAATCTGTTATGTTTCAGTCACTCTCCCTAGGATTCTGTTTAGCATTGCTACTCAAGAGAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| CDS-3UTR CAA 90 bp | ACTACAAAAAGAGGCCAGAAAAAGCAAGACTGTCTGCAGCTAATTATAGGCAAACAAGAAGTGGTTGATTaGGTTAGAATTGCAGAAATG | + |
|
Preference number: 5 (lower is better) Translates to: TTKRGQKKQDCLQLIIGKQEVVD*VRIAEM Trigger: CATTTCTGCAATTCTAACCAAATCAACCACTTCTTG...TTTGCCTATAATTAGCTGCAGACAGTCTTGCTTTTTCTGGCCTCTTTTTGTAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| CDS-3UTR CAA 90 bp | TCATGGCTGTATGTTTGTGTGCATTTATCTACACTTGACTGTTACTACAAAAAGAGAAATCTTTCTCTCTaGAGTAGCAATGCTAAACAG | + |
|
Preference number: 5 (lower is better) Translates to: SWLYVCVHLSTLDCYYKKRNLSL*SSNAKQ Trigger: CTGTTTAGCATTGCTACTCAAGAGAGAAAGATTTCT...CTTTTTGTAGTAACAGTCAAGTGTAGATAAATGCACACAAACATACAGCCATGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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| CDS CAA 72 bp | CTGGGTGGCACAGCTGAGGACAGAAATCTTTCTCTCTaGAGTAGCAATGCTAAACAGAATCCTAGGGAGAGT | + |
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Preference number: 6 (lower is better) Translates to: LGGTAEDRNLSL*SSNAKQNPRES Trigger: ACTCTCCCTAGGATTCTGTTTAGCATTGCTACTCAAGAGAGAAAGATTTCTGTCCTCAGCTGTGCCACCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213103.3 ENSMUST00000216580.2 |
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