RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OLFR1122 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000047594

Ensembl transcript IDs: ENSMUST00000056435.5, ENSMUST00000215371.2

Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCTTATTGCTGTCACTGCTGTCTCAGCTTTCTGTGTTGTGTCTCTTaGTGTTCTCACATGGACTGGAATTGGAATTGCCTTTGGAGCTGC +
Preference number: 1 (lower is better)
Translates to: AYCCHCCLSFLCCVS*CSHMDWNWNCLWSC
Trigger: GCAGCTCCAAAGGCAATTCCAATTCCAGTCCATGTGAGAACAGCAAGAGACACAACACAGAAAGCTGAGACAGCAGTGACAGCAATAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215371.2
3UTR CCA 90 bp ACTGCTGTCTCAGCTTTCTGTGTTGTGTCTCTTGCTGTTCTCACATaGACTGGAATTGGAATTGCCTTTGGAGCTGCTTCCAGTGATGCT +
Preference number: 1 (lower is better)
Translates to: TAVSAFCVVSLAVLT*TGIGIAFGAASSDA
Trigger: AGCATCACTGGAAGCAGCTCCAAAGGCAATTCCAATTCCAGTCCATGTGAGAACAGCAAGAGACACAACACAGAAAGCTGAGACAGCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215371.2
3UTR GCA 90 bp CACATCCTCTGGCTTCTACTCAAAACACTTGCTTATTGCTGTCACTaGTGTCTCAGCTTTCTGTGTTGTGTCTCTTGCTGTTCTCACATG +
Preference number: 1 (lower is better)
Translates to: HILWLLLKTLAYCCH*CLSFLCCVSCCSHM
Trigger: CATGTGAGAACAGCAAGAGACACAACACAGAAAGCTGAGACAGCAGTGACAGCAATAAGCAAGTGTTTTGAGTAGAAGCCAGAGGATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215371.2
3UTR GCA 90 bp GTTATTTTGACTATGGCACATCCTCTGGCTTCTACTCAAAACACTTaGTTATTGCTGTCACTGCTGTCTCAGCTTTCTGTGTTGTGTCTC +
Preference number: 1 (lower is better)
Translates to: VILTMAHPLASTQNT*LLLSLLSQLSVLCL
Trigger: GAGACACAACACAGAAAGCTGAGACAGCAGTGACAGCAATAAGCAAGTGTTTTGAGTAGAAGCCAGAGGATGTGCCATAGTCAAAATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215371.2
3UTR CCA 90 bp ACTAGGCCATCTTTTGATACATATGCAGCTAAAGACAAGAGCTCCTaGGTACTGGTTAGTTCATATTGTTGTTCCACCTATAGGGTTGCA +
Preference number: 1 (lower is better)
Translates to: TRPSFDTYAAKDKSS*VLVSSYCCSTYRVA
Trigger: TGCAACCCTATAGGTGGAACAACAATATGAACTAACCAGTACCCAGGAGCTCTTGTCTTTAGCTGCATATGTATCAAAAGATGGCCTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215371.2
3UTR CAA 90 bp GTCCAATGGGCCTCTCTTTGCAGTGATGGCCGACTAGGCCATCTTTaGATACATATGCAGCTAAAGACAAGAGCTCCTGGGTACTGGTTA +
Preference number: 2 (lower is better)
Translates to: VQWASLCSDGRLGHL*IHMQLKTRAPGYWL
Trigger: TAACCAGTACCCAGGAGCTCTTGTCTTTAGCTGCATATGTATCAAAAGATGGCCTAGTCGGCCATCACTGCAAAGAGAGGCCCATTGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215371.2
3UTR CAA 90 bp TCATATTGTTGTTCCACCTATAGGGTTGCAGTTCCCTTTAGCTCCTaGGGTAATTTCTCTAGCTCCTCCATTGGGGGCCGTGTGATCCAT +
Preference number: 2 (lower is better)
Translates to: SYCCSTYRVAVPFSS*GNFSSSSIGGRVIH
Trigger: ATGGATCACACGGCCCCCAATGGAGGAGCTAGAGAAATTACCCAAGGAGCTAAAGGGAACTGCAACCCTATAGGTGGAACAACAATATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000215371.2
3UTR CAA 90 bp TGCTTATTGCTGTCACTGCTGTCTCAGCTTTCTGTGTTGTGTCTCTaGCTGTTCTCACATGGACTGGAATTGGAATTGCCTTTGGAGCTG +
Preference number: 2 (lower is better)
Translates to: CLLLSLLSQLSVLCL*LFSHGLELELPLEL
Trigger: CAGCTCCAAAGGCAATTCCAATTCCAGTCCATGTGAGAACAGCAAGAGACACAACACAGAAAGCTGAGACAGCAGTGACAGCAATAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215371.2
3UTR-3UTR GCA 90 bp CGACTAGGCCATCTTTTGATACATATGCAGCTAAAGACAAGAGCTCCTGGGTACGACTGGAATTGGAATTaGCTTTGGAGCTGCTTCCAG +
Preference number: 2 (lower is better)
Translates to: RLGHLLIHMQLKTRAPGYDWNWN*LWSCFQ
Trigger: CTGGAAGCAGCTCCAAAGGCAATTCCAATTCCAGTC...GTACCCAGGAGCTCTTGTCTTTAGCTGCATATGTATCAAAAGATGGCCTAGTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215371.2
3UTR-3UTR GCA 90 bp CGACTAGGCCATCTTTTGATACATATGCAGCTAAAGACAAGAGCTCCTGGGTACCTGTGTTGTGTCTCTTaGTGTTCTCACATGGACTGG +
Preference number: 2 (lower is better)
Translates to: RLGHLLIHMQLKTRAPGYLCCVS*CSHMDW
Trigger: CCAGTCCATGTGAGAACAGCAAGAGACACAACACAG...GTACCCAGGAGCTCTTGTCTTTAGCTGCATATGTATCAAAAGATGGCCTAGTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215371.2
3UTR-3UTR CCA 90 bp GCACATCCTCTGGCTTCTACTCAAAACACTTGCTTATTGCTGTCACTGCTGTCTCACATGGACTGGAATTaGAATTGCCTTTGGAGCTGC +
Preference number: 2 (lower is better)
Translates to: AHPLASTQNTCLLLSLLSHMDWN*NCLWSC
Trigger: GCAGCTCCAAAGGCAATTCCAATTCCAGTCCATGTG...AGACAGCAGTGACAGCAATAAGCAAGTGTTTTGAGTAGAAGCCAGAGGATGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215371.2
3UTR CAA 90 bp TTGACTATGGCACATCCTCTGGCTTCTACTCAAAACACTTGCTTATaGCTGTCACTGCTGTCTCAGCTTTCTGTGTTGTGTCTCTTGCTG +
Preference number: 2 (lower is better)
Translates to: LTMAHPLASTQNTCL*LSLLSQLSVLCLLL
Trigger: CAGCAAGAGACACAACACAGAAAGCTGAGACAGCAGTGACAGCAATAAGCAAGTGTTTTGAGTAGAAGCCAGAGGATGTGCCATAGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215371.2
3UTR-3UTR TCA 90 bp CGACTAGGCCATCTTTTGATACATATGCAGCTAAAGACAAGAGCTCCTGGGTACCTGTGCTTGTTATTTTaGCTATGGCACATCCTCTGG +
Preference number: 2 (lower is better)
Translates to: RLGHLLIHMQLKTRAPGYLCLLF*LWHILW
Trigger: CCAGAGGATGTGCCATAGTCAAAATAACAAGCACAG...GTACCCAGGAGCTCTTGTCTTTAGCTGCATATGTATCAAAAGATGGCCTAGTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215371.2
3UTR CAA 90 bp CAAAACACTTGCTTATTGCTGTCACTGCTGTCTCAGCTTTCTGTGTaGTGTCTCTTGCTGTTCTCACATGGACTGGAATTGGAATTGCCT +
Preference number: 2 (lower is better)
Translates to: QNTCLLLSLLSQLSV*CLLLFSHGLELELP
Trigger: AGGCAATTCCAATTCCAGTCCATGTGAGAACAGCAAGAGACACAACACAGAAAGCTGAGACAGCAGTGACAGCAATAAGCAAGTGTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215371.2
3UTR-3UTR TCA 90 bp TGGCACATCCTCTGGCTTCTACTCAAAACACTTGCTTATTGCTGTCACTGCTGTTTTCAACCTTCGTCTTaGTTTCTTGATCCTGATGCC +
Preference number: 2 (lower is better)
Translates to: WHILWLLLKTLAYCCHCCFQPSS*FLDPDA
Trigger: GGCATCAGGATCAAGAAATCAAGACGAAGGTTGAAA...ACAGCAGTGACAGCAATAAGCAAGTGTTTTGAGTAGAAGCCAGAGGATGTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215371.2
3UTR-3UTR TCA 90 bp CGACTAGGCCATCTTTTGATACATATGCAGCTAAAGACAAGAGCTCCTGGGTACGGGTATTTGTTGACATaGGTAGTTGTTTCCATCTTC +
Preference number: 2 (lower is better)
Translates to: RLGHLLIHMQLKTRAPGYGYLLT*VVVSIF
Trigger: GAAGATGGAAACAACTACTCATGTCAACAAATACCC...GTACCCAGGAGCTCTTGTCTTTAGCTGCATATGTATCAAAAGATGGCCTAGTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215371.2
3UTR-3UTR GCA 90 bp CGACTAGGCCATCTTTTGATACATATGCAGCTAAAGACAAGAGCTCCTGGGTACTCAATTAGGAGTGAATaGTCATTATACCCTACTCCC +
Preference number: 2 (lower is better)
Translates to: RLGHLLIHMQLKTRAPGYSIRSE*SLYPTP
Trigger: GGGAGTAGGGTATAATGAGCATTCACTCCTAATTGA...GTACCCAGGAGCTCTTGTCTTTAGCTGCATATGTATCAAAAGATGGCCTAGTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215371.2
3UTR-3UTR CCA 90 bp GCACATCCTCTGGCTTCTACTCAAAACACTTGCTTATTGCTGTCACTGCTGTCTTACTTTATACCATACTaGCCACCAACCCAGAGTATA +
Preference number: 2 (lower is better)
Translates to: AHPLASTQNTCLLLSLLSYFIPY*PPTQSI
Trigger: TATACTCTGGGTTGGTGGCCAGTATGGTATAAAGTA...AGACAGCAGTGACAGCAATAAGCAAGTGTTTTGAGTAGAAGCCAGAGGATGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215371.2
3UTR CAA 90 bp TGTTATTTTGACTATGGCACATCCTCTGGCTTCTACTCAAAACACTaGCTTATTGCTGTCACTGCTGTCTCAGCTTTCTGTGTTGTGTCT +
Preference number: 2 (lower is better)
Translates to: CYFDYGTSSGFYSKH*LIAVTAVSAFCVVS
Trigger: AGACACAACACAGAAAGCTGAGACAGCAGTGACAGCAATAAGCAAGTGTTTTGAGTAGAAGCCAGAGGATGTGCCATAGTCAAAATAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215371.2
3UTR-3UTR TCA 90 bp CGACTAGGCCATCTTTTGATACATATGCAGCTAAAGACAAGAGCTCCTGGGTACGCACAAAGGCATGCATaGAACTCATTTTACATAATG +
Preference number: 2 (lower is better)
Translates to: RLGHLLIHMQLKTRAPGYAQRHA*NSFYIM
Trigger: CATTATGTAAAATGAGTTTCATGCATGCCTTTGTGC...GTACCCAGGAGCTCTTGTCTTTAGCTGCATATGTATCAAAAGATGGCCTAGTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215371.2
3UTR-3UTR TCA 90 bp GCACATCCTCTGGCTTCTACTCAAAACACTTGCTTATTGCTGTCACTGCTGTCTGGAGGTTATTCTAGATaGGAAAGAAAATCCAAGGAA +
Preference number: 2 (lower is better)
Translates to: AHPLASTQNTCLLLSLLSGGYSR*ERKSKE
Trigger: TTCCTTGGATTTTCTTTCTCATCTAGAATAACCTCC...AGACAGCAGTGACAGCAATAAGCAAGTGTTTTGAGTAGAAGCCAGAGGATGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215371.2
3UTR-3UTR GCA 90 bp GCACATCCTCTGGCTTCTACTCAAAACACTTGCTTATTGCTGTCACTGCTGTCTCACAGCACAAAGGCATaGATGAAACTCATTTTACAT +
Preference number: 2 (lower is better)
Translates to: AHPLASTQNTCLLLSLLSHSTKA*MKLILH
Trigger: ATGTAAAATGAGTTTCATGCATGCCTTTGTGCTGTG...AGACAGCAGTGACAGCAATAAGCAAGTGTTTTGAGTAGAAGCCAGAGGATGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215371.2
3UTR-3UTR CCA 90 bp CGACTAGGCCATCTTTTGATACATATGCAGCTAAAGACAAGAGCTCCTGGGTACGTTATAATTTCTTTATaGATTGCCACAGGGCCCATT +
Preference number: 2 (lower is better)
Translates to: RLGHLLIHMQLKTRAPGYVIISL*IATGPI
Trigger: AATGGGCCCTGTGGCAATCCATAAAGAAATTATAAC...GTACCCAGGAGCTCTTGTCTTTAGCTGCATATGTATCAAAAGATGGCCTAGTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215371.2
3UTR CAA 90 bp AAAGAAAATCCAAGGAAATCTGGAAGTGTCCATAACAGAATCAAGTaGGTCAGACCTATCTATGTCAGAAGCAAGAATAGTGTCCTTTTG +
Preference number: 2 (lower is better)
Translates to: KENPRKSGSVHNRIK*VRPIYVRSKNSVLL
Trigger: CAAAAGGACACTATTCTTGCTTCTGACATAGATAGGTCTGACCAACTTGATTCTGTTATGGACACTTCCAGATTTCCTTGGATTTTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215371.2
3UTR CAA 90 bp TCCAAGACCACATTATCCCTGTTTATAGTTTTATTGTATAAGACTTaGAGAATTGTAACTCAGCAATACACACAGCACAAAGGCATGCAT +
Preference number: 2 (lower is better)
Translates to: SKTTLSLFIVLLYKT*RIVTQQYTQHKGMH
Trigger: ATGCATGCCTTTGTGCTGTGTGTATTGCTGAGTTACAATTCTCAAAGTCTTATACAATAAAACTATAAACAGGGATAATGTGGTCTTGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215371.2
3UTR GCA 72 bp GCCCTGGAGTTCCCCTGTACTGGGGCATATAAAGTTTaGAAGTCCAATGGGCCTCTCTTTGCAGTGATGGCC +
Preference number: 3 (lower is better)
Translates to: ALEFPCTGAYKV*KSNGPLFAVMA
Trigger: GGCCATCACTGCAAAGAGAGGCCCATTGGACTTGCAAACTTTATATGCCCCAGTACAGGGGAACTCCAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215371.2
3UTR CCA 72 bp GTTCCACCTATAGGGTTGCAGTTCCCTTTAGCTCCTTaGGTAATTTCTCTAGCTCCTCCATTGGGGGCCGTG +
Preference number: 3 (lower is better)
Translates to: VPPIGLQFPLAP*VISLAPPLGAV
Trigger: CACGGCCCCCAATGGAGGAGCTAGAGAAATTACCCAAGGAGCTAAAGGGAACTGCAACCCTATAGGTGGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000215371.2
3UTR-3UTR CAA 90 bp GCACATCCTCTGGCTTCTACTCAAAACACTTGCTTATTGCTGTCACTGCTGTCTGGACTGGAATTGGAATaGCCTTTGGAGCTGCTTCCA +
Preference number: 3 (lower is better)
Translates to: AHPLASTQNTCLLLSLLSGLELE*PLELLP
Trigger: TGGAAGCAGCTCCAAAGGCAATTCCAATTCCAGTCC...AGACAGCAGTGACAGCAATAAGCAAGTGTTTTGAGTAGAAGCCAGAGGATGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215371.2
3UTR CCA 72 bp TCAGCTTTCTGTGTTGTGTCTCTTGCTGTTCTCACATaGACTGGAATTGGAATTGCCTTTGGAGCTGCTTCC +
Preference number: 3 (lower is better)
Translates to: SAFCVVSLAVLT*TGIGIAFGAAS
Trigger: GGAAGCAGCTCCAAAGGCAATTCCAATTCCAGTCCATGTGAGAACAGCAAGAGACACAACACAGAAAGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215371.2
3UTR-3UTR CAA 90 bp CGACTAGGCCATCTTTTGATACATATGCAGCTAAAGACAAGAGCTCCTGGGTACTCTCAGCTTTCTGTGTaGTGTCTCTTGCTGTTCTCA +
Preference number: 3 (lower is better)
Translates to: RLGHLLIHMQLKTRAPGYSQLSV*CLLLFS
Trigger: TGAGAACAGCAAGAGACACAACACAGAAAGCTGAGA...GTACCCAGGAGCTCTTGTCTTTAGCTGCATATGTATCAAAAGATGGCCTAGTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215371.2
3UTR-3UTR CAA 90 bp CGACTAGGCCATCTTTTGATACATATGCAGCTAAAGACAAGAGCTCCTGGGTACCAAAACACTTGCTTATaGCTGTCACTGCTGTCTCAG +
Preference number: 3 (lower is better)
Translates to: RLGHLLIHMQLKTRAPGYQNTCL*LSLLSQ
Trigger: CTGAGACAGCAGTGACAGCAATAAGCAAGTGTTTTG...GTACCCAGGAGCTCTTGTCTTTAGCTGCATATGTATCAAAAGATGGCCTAGTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215371.2
3UTR GCA 72 bp TGTCACTGCTGTCTCAGCTTTCTGTGTTGTGTCTCTTaGTGTTCTCACATGGACTGGAATTGGAATTGCCTT +
Preference number: 3 (lower is better)
Translates to: CHCCLSFLCCVS*CSHMDWNWNCL
Trigger: AAGGCAATTCCAATTCCAGTCCATGTGAGAACAGCAAGAGACACAACACAGAAAGCTGAGACAGCAGTGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215371.2
3UTR GCA 72 bp CACATCCTCTGGCTTCTACTCAAAACACTTGCTTATTaGTGTCACTGCTGTCTCAGCTTTCTGTGTTGTGTC +
Preference number: 3 (lower is better)
Translates to: HILWLLLKTLAY*CHCCLSFLCCV
Trigger: GACACAACACAGAAAGCTGAGACAGCAGTGACAGCAATAAGCAAGTGTTTTGAGTAGAAGCCAGAGGATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215371.2
3UTR GCA 72 bp ACTATGGCACATCCTCTGGCTTCTACTCAAAACACTTaGTTATTGCTGTCACTGCTGTCTCAGCTTTCTGTG +
Preference number: 3 (lower is better)
Translates to: TMAHPLASTQNT*LLLSLLSQLSV
Trigger: CACAGAAAGCTGAGACAGCAGTGACAGCAATAAGCAAGTGTTTTGAGTAGAAGCCAGAGGATGTGCCATAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215371.2
3UTR TCA 72 bp ATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTGCAGTaGTGGCCGACTAGGCCATCTTTTGATACATATGCA +
Preference number: 3 (lower is better)
Translates to: IKFASPMGLSLQ*WPTRPSFDTYA
Trigger: TGCATATGTATCAAAAGATGGCCTAGTCGGCCATCACTGCAAAGAGAGGCCCATTGGACTTGCAAACTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215371.2
3UTR GCA 72 bp TGGCTTCTACTCAAAACACTTGCTTATTGCTGTCACTaGTGTCTCAGCTTTCTGTGTTGTGTCTCTTGCTGT +
Preference number: 3 (lower is better)
Translates to: WLLLKTLAYCCH*CLSFLCCVSCC
Trigger: ACAGCAAGAGACACAACACAGAAAGCTGAGACAGCAGTGACAGCAATAAGCAAGTGTTTTGAGTAGAAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215371.2
3UTR-3UTR CAA 90 bp CGACTAGGCCATCTTTTGATACATATGCAGCTAAAGACAAGAGCTCCTGGGTACTTTCAGCTTTCAACATaGGTGACCTCATTCATGGTA +
Preference number: 3 (lower is better)
Translates to: RLGHLLIHMQLKTRAPGYFQLST*VTSFMV
Trigger: TACCATGAATGAGGTCACCAATGTTGAAAGCTGAAA...GTACCCAGGAGCTCTTGTCTTTAGCTGCATATGTATCAAAAGATGGCCTAGTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215371.2
3UTR-3UTR CAA 90 bp GCACATCCTCTGGCTTCTACTCAAAACACTTGCTTATTGCTGTCACTGCTGTCTATATATATATATATATaGGATATTCCCCCTGCCCCC +
Preference number: 3 (lower is better)
Translates to: AHPLASTQNTCLLLSLLSIYIYI*DIPPAP
Trigger: GGGGGCAGGGGGAATATCCAATATATATATATATAT...AGACAGCAGTGACAGCAATAAGCAAGTGTTTTGAGTAGAAGCCAGAGGATGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000215371.2
3UTR CCA 72 bp ATACATATGCAGCTAAAGACAAGAGCTCCTGGGTACTaGTTAGTTCATATTGTTGTTCCACCTATAGGGTTG +
Preference number: 3 (lower is better)
Translates to: IHMQLKTRAPGY*LVHIVVPPIGL
Trigger: CAACCCTATAGGTGGAACAACAATATGAACTAACCAGTACCCAGGAGCTCTTGTCTTTAGCTGCATATGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215371.2
3UTR CCA 72 bp CAAGGAAATCTGGAAGTGTCCATAACAGAATCAAGTTaGTCAGACCTATCTATGTCAGAAGCAAGAATAGTG +
Preference number: 3 (lower is better)
Translates to: QGNLEVSITESS*SDLSMSEARIV
Trigger: CACTATTCTTGCTTCTGACATAGATAGGTCTGACCAACTTGATTCTGTTATGGACACTTCCAGATTTCCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215371.2
3UTR TCA 72 bp TACTTTCTGTCCATGTTCTTTCTGTGCTTGTTATTTTaGCTATGGCACATCCTCTGGCTTCTACTCAAAACA +
Preference number: 3 (lower is better)
Translates to: YFLSMFFLCLLF*LWHILWLLLKT
Trigger: TGTTTTGAGTAGAAGCCAGAGGATGTGCCATAGTCAAAATAACAAGCACAGAAAGAACATGGACAGAAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215371.2
3UTR CCA 72 bp TCTTTTGATACATATGCAGCTAAAGACAAGAGCTCCTaGGTACTGGTTAGTTCATATTGTTGTTCCACCTAT +
Preference number: 3 (lower is better)
Translates to: SFDTYAAKDKSS*VLVSSYCCSTY
Trigger: ATAGGTGGAACAACAATATGAACTAACCAGTACCCAGGAGCTCTTGTCTTTAGCTGCATATGTATCAAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215371.2
3UTR-3UTR CAA 90 bp CTTTTGGGGGATGGAATAATTCCTTTGCTAGCAAATCCTACATTTAGTTCTTGTCCTAGCGCTATAATATaGACTACTGAGAGAAAAGAT +
Preference number: 3 (lower is better)
Translates to: LLGDGIIPLLANPTFSSCPSAII*TTERKD
Trigger: ATCTTTTCTCTCAGTAGTCAATATTATAGCGCTAGG...ACAAGAACTAAATGTAGGATTTGCTAGCAAAGGAATTATTCCATCCCCCAAAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000215371.2
3UTR CAA 72 bp TGTTCCACCTATAGGGTTGCAGTTCCCTTTAGCTCCTaGGGTAATTTCTCTAGCTCCTCCATTGGGGGCCGT +
Preference number: 4 (lower is better)
Translates to: CSTYRVAVPFSS*GNFSSSSIGGR
Trigger: ACGGCCCCCAATGGAGGAGCTAGAGAAATTACCCAAGGAGCTAAAGGGAACTGCAACCCTATAGGTGGAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000215371.2
3UTR CAA 72 bp GCCTCTCTTTGCAGTGATGGCCGACTAGGCCATCTTTaGATACATATGCAGCTAAAGACAAGAGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: ASLCSDGRLGHL*IHMQLKTRAPG
Trigger: CCCAGGAGCTCTTGTCTTTAGCTGCATATGTATCAAAAGATGGCCTAGTCGGCCATCACTGCAAAGAGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215371.2
CDS-3UTR TCA 90 bp TGGCACATCCTCTGGCTTCTACTCAAAACACTTGCTTATTGCTGTCACTGCTGTCACCACAAGCAAGCTTaGGTAGTGGGGGAATGTCAC +
Preference number: 4 (lower is better)
Translates to: WHILWLLLKTLAYCCHCCHHKQA*VVGECH
Trigger: GTGACATTCCCCCACTACTCAAGCTTGCTTGTGGTG...ACAGCAGTGACAGCAATAAGCAAGTGTTTTGAGTAGAAGCCAGAGGATGTGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000215371.2
3UTR CAA 72 bp TGTCTCTTGCTGTTCTCACATGGACTGGAATTGGAATaGCCTTTGGAGCTGCTTCCAGTGATGCTACTAGAC +
Preference number: 4 (lower is better)
Translates to: CLLLFSHGLELE*PLELLPVMLLD
Trigger: GTCTAGTAGCATCACTGGAAGCAGCTCCAAAGGCAATTCCAATTCCAGTCCATGTGAGAACAGCAAGAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215371.2
3UTR CAA 72 bp CTGTCACTGCTGTCTCAGCTTTCTGTGTTGTGTCTCTaGCTGTTCTCACATGGACTGGAATTGGAATTGCCT +
Preference number: 4 (lower is better)
Translates to: LSLLSQLSVLCL*LFSHGLELELP
Trigger: AGGCAATTCCAATTCCAGTCCATGTGAGAACAGCAAGAGACACAACACAGAAAGCTGAGACAGCAGTGACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000215371.2
CDS-3UTR GCA 90 bp GCACATCCTCTGGCTTCTACTCAAAACACTTGCTTATTGCTGTCACTGCTGTCTAAGTACATAGGGGTCTaGAGAGCAGAGTCAGTTCTT +
Preference number: 4 (lower is better)
Translates to: AHPLASTQNTCLLLSLLSKYIGV*RAESVL
Trigger: AAGAACTGACTCTGCTCTGCAGACCCCTATGTACTT...AGACAGCAGTGACAGCAATAAGCAAGTGTTTTGAGTAGAAGCCAGAGGATGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215371.2
3UTR CAA 72 bp GCACATCCTCTGGCTTCTACTCAAAACACTTGCTTATaGCTGTCACTGCTGTCTCAGCTTTCTGTGTTGTGT +
Preference number: 4 (lower is better)
Translates to: AHPLASTQNTCL*LSLLSQLSVLC
Trigger: ACACAACACAGAAAGCTGAGACAGCAGTGACAGCAATAAGCAAGTGTTTTGAGTAGAAGCCAGAGGATGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215371.2
3UTR CAA 72 bp GACTATGGCACATCCTCTGGCTTCTACTCAAAACACTaGCTTATTGCTGTCACTGCTGTCTCAGCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: DYGTSSGFYSKH*LIAVTAVSAFC
Trigger: ACAGAAAGCTGAGACAGCAGTGACAGCAATAAGCAAGTGTTTTGAGTAGAAGCCAGAGGATGTGCCATAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215371.2
CDS-3UTR CCA 90 bp CGACTAGGCCATCTTTTGATACATATGCAGCTAAAGACAAGAGCTCCTGGGTACTTGTCCAGTCACAACTaGAATAATGCAGATCCAGCA +
Preference number: 4 (lower is better)
Translates to: RLGHLLIHMQLKTRAPGYLSSHN*NNADPA
Trigger: TGCTGGATCTGCATTATTCCAGTTGTGACTGGACAA...GTACCCAGGAGCTCTTGTCTTTAGCTGCATATGTATCAAAAGATGGCCTAGTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215371.2
CDS-3UTR TCA 90 bp CTTTTGGGGGATGGAATAATTCCTTTGCTAGCAAATCCTACATTTAGTTCTTGTAGCATCCACTGGAGTTaGGGGACATCAGAAAACCCT +
Preference number: 4 (lower is better)
Translates to: LLGDGIIPLLANPTFSSCSIHWS*GTSENP
Trigger: AGGGTTTTCTGATGTCCCTCAACTCCAGTGGATGCT...ACAAGAACTAAATGTAGGATTTGCTAGCAAAGGAATTATTCCATCCCCCAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000215371.2
CDS-3UTR GCA 90 bp CGACTAGGCCATCTTTTGATACATATGCAGCTAAAGACAAGAGCTCCTGGGTACATATGCTTTTGGTTGTaGATATGTGATAGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: RLGHLLIHMQLKTRAPGYICFWL*ICDSSC
Trigger: ACAGCTACTATCACATATGCACAACCAAAAGCATAT...GTACCCAGGAGCTCTTGTCTTTAGCTGCATATGTATCAAAAGATGGCCTAGTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215371.2
CDS-3UTR TCA 90 bp CTTTTGGGGGATGGAATAATTCCTTTGCTAGCAAATCCTACATTTAGTTCTTGTGCATCCTTGGGATTGTaGCTGTTACATAGCAGATTT +
Preference number: 4 (lower is better)
Translates to: LLGDGIIPLLANPTFSSCASLGL*LLHSRF
Trigger: AAATCTGCTATGTAACAGTCACAATCCCAAGGATGC...ACAAGAACTAAATGTAGGATTTGCTAGCAAAGGAATTATTCCATCCCCCAAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000215371.2
3UTR CAA 72 bp TTACTTTCTGTCCATGTTCTTTCTGTGCTTGTTATTTaGACTATGGCACATCCTCTGGCTTCTACTCAAAAC +
Preference number: 4 (lower is better)
Translates to: LLSVHVLSVLVI*TMAHPLASTQN
Trigger: GTTTTGAGTAGAAGCCAGAGGATGTGCCATAGTCAAAATAACAAGCACAGAAAGAACATGGACAGAAAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215371.2
CDS-3UTR TCA 90 bp CTTTTGGGGGATGGAATAATTCCTTTGCTAGCAAATCCTACATTTAGTTCTTGTACCACAACTATTAGATaGGATGAGCATGTGGAAAAG +
Preference number: 4 (lower is better)
Translates to: LLGDGIIPLLANPTFSSCTTTIR*DEHVEK
Trigger: CTTTTCCACATGCTCATCTCATCTAATAGTTGTGGT...ACAAGAACTAAATGTAGGATTTGCTAGCAAAGGAATTATTCCATCCCCCAAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000215371.2
3UTR CAA 72 bp TTATGTACTCCTTCTAACAAGGCCATCTACCATAGCTaGGTTAGATCCACCATGATACTCTTAAATAAAACC +
Preference number: 4 (lower is better)
Translates to: LCTPSNKAIYHS*VRSTMILLNKT
Trigger: GGTTTTATTTAAGAGTATCATGGTGGATCTAACCAAGCTATGGTAGATGGCCTTGTTAGAAGGAGTACATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215371.2
3UTR CAA 72 bp GACATACAGCTATTGCTGTTTAGCTACTACAATTATTaGTTTTATTGCCAGTTTGACCTCTATTTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: DIQLLLFSYYNY*FYCQFDLYFCP
Trigger: GGGGCAGAAATAGAGGTCAAACTGGCAATAAAACAAATAATTGTAGTAGCTAAACAGCAATAGCTGTATGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215371.2
3UTR CAA 72 bp GAGCTGCTTCCAGTGATGCTACTAGACATACAGCTATaGCTGTTTAGCTACTACAATTATTTGTTTTATTGC +
Preference number: 4 (lower is better)
Translates to: ELLPVMLLDIQL*LFSYYNYLFYC
Trigger: GCAATAAAACAAATAATTGTAGTAGCTAAACAGCAATAGCTGTATGTCTAGTAGCATCACTGGAAGCAGCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000215371.2
CDS-3UTR CCA 90 bp CTTTTGGGGGATGGAATAATTCCTTTGCTAGCAAATCCTACATTTAGTTCTTGTCGACTGATATGCTTTTaGTTGTGCATATGTGATAGT +
Preference number: 4 (lower is better)
Translates to: LLGDGIIPLLANPTFSSCRLICF*LCICDS
Trigger: ACTATCACATATGCACAACCAAAAGCATATCAGTCG...ACAAGAACTAAATGTAGGATTTGCTAGCAAAGGAATTATTCCATCCCCCAAAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000215371.2
CDS-3UTR CAA 90 bp TGGCACATCCTCTGGCTTCTACTCAAAACACTTGCTTATTGCTGTCACTGCTGTAAGCATCCACTGGAGTaGAGGGACATCAGAAAACCC +
Preference number: 5 (lower is better)
Translates to: WHILWLLLKTLAYCCHCCKHPLE*RDIRKP
Trigger: GGGTTTTCTGATGTCCCTCAACTCCAGTGGATGCTT...ACAGCAGTGACAGCAATAAGCAAGTGTTTTGAGTAGAAGCCAGAGGATGTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215371.2
CDS-3UTR CAA 90 bp TGGCACATCCTCTGGCTTCTACTCAAAACACTTGCTTATTGCTGTCACTGCTGTTCACCACAAGCAAGCTaGAGTAGTGGGGGAATGTCA +
Preference number: 5 (lower is better)
Translates to: WHILWLLLKTLAYCCHCCSPQAS*SSGGMS
Trigger: TGACATTCCCCCACTACTCAAGCTTGCTTGTGGTGA...ACAGCAGTGACAGCAATAAGCAAGTGTTTTGAGTAGAAGCCAGAGGATGTGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000215371.2
CDS-3UTR CAA 90 bp GCACATCCTCTGGCTTCTACTCAAAACACTTGCTTATTGCTGTCACTGCTGTCTACCTCCCTCCAGATGTaGCCAGTTTTAGAACGTTGC +
Preference number: 5 (lower is better)
Translates to: AHPLASTQNTCLLLSLLSTSLQM*PVLERC
Trigger: GCAACGTTCTAAAACTGGCAACATCTGGAGGGAGGT...AGACAGCAGTGACAGCAATAAGCAAGTGTTTTGAGTAGAAGCCAGAGGATGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000215371.2
CDS CCA 90 bp ACAATAAGGCAAAGAGAAAATCTGGTAAGTTTGTCCAGTCACAACTaGAATAATGCAGATCCAGCAAGCAGCCACAAGCTGCACACAGAC +
Preference number: 5 (lower is better)
Translates to: TIRQRENLVSLSSHN*NNADPASSHKLHTD
Trigger: GTCTGTGTGCAGCTTGTGGCTGCTTGCTGGATCTGCATTATTCCAGTTGTGACTGGACAAACTTACCAGATTTTCTCTTTGCCTTATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000056435.5
ENSMUST00000215371.2
CDS CCA 72 bp CAAAGAGAAAATCTGGTAAGTTTGTCCAGTCACAACTaGAATAATGCAGATCCAGCAAGCAGCCACAAGCTG +
Preference number: 6 (lower is better)
Translates to: QRENLVSLSSHN*NNADPASSHKL
Trigger: CAGCTTGTGGCTGCTTGCTGGATCTGCATTATTCCAGTTGTGACTGGACAAACTTACCAGATTTTCTCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000056435.5
ENSMUST00000215371.2
CDS CAA 90 bp AATTTTGTTAGAGCCACAATAAGGCAAAGAGAAAATCTGGTAAGTTaGTCCAGTCACAACTGGAATAATGCAGATCCAGCAAGCAGCCAC +
Preference number: 6 (lower is better)
Translates to: NFVRATIRQRENLVS*SSHNWNNADPASSH
Trigger: GTGGCTGCTTGCTGGATCTGCATTATTCCAGTTGTGACTGGACAAACTTACCAGATTTTCTCTTTGCCTTATTGTGGCTCTAACAAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000056435.5
ENSMUST00000215371.2
CDS GCA 72 bp CTTTCCCAAGGTTTCCGACTGATATGCTTTTGGTTGTaGATATGTGATAGTAGCTGTTCCATAAAACAACAC +
Preference number: 6 (lower is better)
Translates to: LSQGFRLICFWL*ICDSSCSIKQH
Trigger: GTGTTGTTTTATGGAACAGCTACTATCACATATGCACAACCAAAAGCATATCAGTCGGAAACCTTGGGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000056435.5
ENSMUST00000215371.2
CDS CAA 72 bp CAGCTTTCCCAAGGTTTCCGACTGATATGCTTTTGGTaGTGCATATGTGATAGTAGCTGTTCCATAAAACAA +
Preference number: 6 (lower is better)
Translates to: QLSQGFRLICFW*CICDSSCSIKQ
Trigger: TTGTTTTATGGAACAGCTACTATCACATATGCACAACCAAAAGCATATCAGTCGGAAACCTTGGGAAAGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000056435.5
ENSMUST00000215371.2