Pregenerated sensors for OLFR1122 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047594Ensembl transcript IDs: ENSMUST00000056435.5, ENSMUST00000215371.2
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | GCTTATTGCTGTCACTGCTGTCTCAGCTTTCTGTGTTGTGTCTCTTaGTGTTCTCACATGGACTGGAATTGGAATTGCCTTTGGAGCTGC | + |
Preference number: 1 (lower is better) Translates to: AYCCHCCLSFLCCVS*CSHMDWNWNCLWSC Trigger: GCAGCTCCAAAGGCAATTCCAATTCCAGTCCATGTGAGAACAGCAAGAGACACAACACAGAAAGCTGAGACAGCAGTGACAGCAATAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215371.2 |
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3UTR CCA 90 bp | ACTGCTGTCTCAGCTTTCTGTGTTGTGTCTCTTGCTGTTCTCACATaGACTGGAATTGGAATTGCCTTTGGAGCTGCTTCCAGTGATGCT | + |
Preference number: 1 (lower is better) Translates to: TAVSAFCVVSLAVLT*TGIGIAFGAASSDA Trigger: AGCATCACTGGAAGCAGCTCCAAAGGCAATTCCAATTCCAGTCCATGTGAGAACAGCAAGAGACACAACACAGAAAGCTGAGACAGCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215371.2 |
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3UTR GCA 90 bp | CACATCCTCTGGCTTCTACTCAAAACACTTGCTTATTGCTGTCACTaGTGTCTCAGCTTTCTGTGTTGTGTCTCTTGCTGTTCTCACATG | + |
Preference number: 1 (lower is better) Translates to: HILWLLLKTLAYCCH*CLSFLCCVSCCSHM Trigger: CATGTGAGAACAGCAAGAGACACAACACAGAAAGCTGAGACAGCAGTGACAGCAATAAGCAAGTGTTTTGAGTAGAAGCCAGAGGATGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215371.2 |
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3UTR GCA 90 bp | GTTATTTTGACTATGGCACATCCTCTGGCTTCTACTCAAAACACTTaGTTATTGCTGTCACTGCTGTCTCAGCTTTCTGTGTTGTGTCTC | + |
Preference number: 1 (lower is better) Translates to: VILTMAHPLASTQNT*LLLSLLSQLSVLCL Trigger: GAGACACAACACAGAAAGCTGAGACAGCAGTGACAGCAATAAGCAAGTGTTTTGAGTAGAAGCCAGAGGATGTGCCATAGTCAAAATAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215371.2 |
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3UTR CCA 90 bp | ACTAGGCCATCTTTTGATACATATGCAGCTAAAGACAAGAGCTCCTaGGTACTGGTTAGTTCATATTGTTGTTCCACCTATAGGGTTGCA | + |
Preference number: 1 (lower is better) Translates to: TRPSFDTYAAKDKSS*VLVSSYCCSTYRVA Trigger: TGCAACCCTATAGGTGGAACAACAATATGAACTAACCAGTACCCAGGAGCTCTTGTCTTTAGCTGCATATGTATCAAAAGATGGCCTAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215371.2 |
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3UTR CAA 90 bp | GTCCAATGGGCCTCTCTTTGCAGTGATGGCCGACTAGGCCATCTTTaGATACATATGCAGCTAAAGACAAGAGCTCCTGGGTACTGGTTA | + |
Preference number: 2 (lower is better) Translates to: VQWASLCSDGRLGHL*IHMQLKTRAPGYWL Trigger: TAACCAGTACCCAGGAGCTCTTGTCTTTAGCTGCATATGTATCAAAAGATGGCCTAGTCGGCCATCACTGCAAAGAGAGGCCCATTGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215371.2 |
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3UTR CAA 90 bp | TCATATTGTTGTTCCACCTATAGGGTTGCAGTTCCCTTTAGCTCCTaGGGTAATTTCTCTAGCTCCTCCATTGGGGGCCGTGTGATCCAT | + |
Preference number: 2 (lower is better) Translates to: SYCCSTYRVAVPFSS*GNFSSSSIGGRVIH Trigger: ATGGATCACACGGCCCCCAATGGAGGAGCTAGAGAAATTACCCAAGGAGCTAAAGGGAACTGCAACCCTATAGGTGGAACAACAATATGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215371.2 |
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3UTR CAA 90 bp | TGCTTATTGCTGTCACTGCTGTCTCAGCTTTCTGTGTTGTGTCTCTaGCTGTTCTCACATGGACTGGAATTGGAATTGCCTTTGGAGCTG | + |
Preference number: 2 (lower is better) Translates to: CLLLSLLSQLSVLCL*LFSHGLELELPLEL Trigger: CAGCTCCAAAGGCAATTCCAATTCCAGTCCATGTGAGAACAGCAAGAGACACAACACAGAAAGCTGAGACAGCAGTGACAGCAATAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215371.2 |
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3UTR-3UTR GCA 90 bp | CGACTAGGCCATCTTTTGATACATATGCAGCTAAAGACAAGAGCTCCTGGGTACGACTGGAATTGGAATTaGCTTTGGAGCTGCTTCCAG | + |
Preference number: 2 (lower is better) Translates to: RLGHLLIHMQLKTRAPGYDWNWN*LWSCFQ Trigger: CTGGAAGCAGCTCCAAAGGCAATTCCAATTCCAGTC...GTACCCAGGAGCTCTTGTCTTTAGCTGCATATGTATCAAAAGATGGCCTAGTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215371.2 |
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3UTR-3UTR GCA 90 bp | CGACTAGGCCATCTTTTGATACATATGCAGCTAAAGACAAGAGCTCCTGGGTACCTGTGTTGTGTCTCTTaGTGTTCTCACATGGACTGG | + |
Preference number: 2 (lower is better) Translates to: RLGHLLIHMQLKTRAPGYLCCVS*CSHMDW Trigger: CCAGTCCATGTGAGAACAGCAAGAGACACAACACAG...GTACCCAGGAGCTCTTGTCTTTAGCTGCATATGTATCAAAAGATGGCCTAGTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215371.2 |
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3UTR-3UTR CCA 90 bp | GCACATCCTCTGGCTTCTACTCAAAACACTTGCTTATTGCTGTCACTGCTGTCTCACATGGACTGGAATTaGAATTGCCTTTGGAGCTGC | + |
Preference number: 2 (lower is better) Translates to: AHPLASTQNTCLLLSLLSHMDWN*NCLWSC Trigger: GCAGCTCCAAAGGCAATTCCAATTCCAGTCCATGTG...AGACAGCAGTGACAGCAATAAGCAAGTGTTTTGAGTAGAAGCCAGAGGATGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215371.2 |
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3UTR CAA 90 bp | TTGACTATGGCACATCCTCTGGCTTCTACTCAAAACACTTGCTTATaGCTGTCACTGCTGTCTCAGCTTTCTGTGTTGTGTCTCTTGCTG | + |
Preference number: 2 (lower is better) Translates to: LTMAHPLASTQNTCL*LSLLSQLSVLCLLL Trigger: CAGCAAGAGACACAACACAGAAAGCTGAGACAGCAGTGACAGCAATAAGCAAGTGTTTTGAGTAGAAGCCAGAGGATGTGCCATAGTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215371.2 |
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3UTR-3UTR TCA 90 bp | CGACTAGGCCATCTTTTGATACATATGCAGCTAAAGACAAGAGCTCCTGGGTACCTGTGCTTGTTATTTTaGCTATGGCACATCCTCTGG | + |
Preference number: 2 (lower is better) Translates to: RLGHLLIHMQLKTRAPGYLCLLF*LWHILW Trigger: CCAGAGGATGTGCCATAGTCAAAATAACAAGCACAG...GTACCCAGGAGCTCTTGTCTTTAGCTGCATATGTATCAAAAGATGGCCTAGTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215371.2 |
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3UTR CAA 90 bp | CAAAACACTTGCTTATTGCTGTCACTGCTGTCTCAGCTTTCTGTGTaGTGTCTCTTGCTGTTCTCACATGGACTGGAATTGGAATTGCCT | + |
Preference number: 2 (lower is better) Translates to: QNTCLLLSLLSQLSV*CLLLFSHGLELELP Trigger: AGGCAATTCCAATTCCAGTCCATGTGAGAACAGCAAGAGACACAACACAGAAAGCTGAGACAGCAGTGACAGCAATAAGCAAGTGTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215371.2 |
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3UTR-3UTR TCA 90 bp | TGGCACATCCTCTGGCTTCTACTCAAAACACTTGCTTATTGCTGTCACTGCTGTTTTCAACCTTCGTCTTaGTTTCTTGATCCTGATGCC | + |
Preference number: 2 (lower is better) Translates to: WHILWLLLKTLAYCCHCCFQPSS*FLDPDA Trigger: GGCATCAGGATCAAGAAATCAAGACGAAGGTTGAAA...ACAGCAGTGACAGCAATAAGCAAGTGTTTTGAGTAGAAGCCAGAGGATGTGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215371.2 |
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3UTR-3UTR TCA 90 bp | CGACTAGGCCATCTTTTGATACATATGCAGCTAAAGACAAGAGCTCCTGGGTACGGGTATTTGTTGACATaGGTAGTTGTTTCCATCTTC | + |
Preference number: 2 (lower is better) Translates to: RLGHLLIHMQLKTRAPGYGYLLT*VVVSIF Trigger: GAAGATGGAAACAACTACTCATGTCAACAAATACCC...GTACCCAGGAGCTCTTGTCTTTAGCTGCATATGTATCAAAAGATGGCCTAGTCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215371.2 |
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3UTR-3UTR GCA 90 bp | CGACTAGGCCATCTTTTGATACATATGCAGCTAAAGACAAGAGCTCCTGGGTACTCAATTAGGAGTGAATaGTCATTATACCCTACTCCC | + |
Preference number: 2 (lower is better) Translates to: RLGHLLIHMQLKTRAPGYSIRSE*SLYPTP Trigger: GGGAGTAGGGTATAATGAGCATTCACTCCTAATTGA...GTACCCAGGAGCTCTTGTCTTTAGCTGCATATGTATCAAAAGATGGCCTAGTCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215371.2 |
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3UTR-3UTR CCA 90 bp | GCACATCCTCTGGCTTCTACTCAAAACACTTGCTTATTGCTGTCACTGCTGTCTTACTTTATACCATACTaGCCACCAACCCAGAGTATA | + |
Preference number: 2 (lower is better) Translates to: AHPLASTQNTCLLLSLLSYFIPY*PPTQSI Trigger: TATACTCTGGGTTGGTGGCCAGTATGGTATAAAGTA...AGACAGCAGTGACAGCAATAAGCAAGTGTTTTGAGTAGAAGCCAGAGGATGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215371.2 |
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3UTR CAA 90 bp | TGTTATTTTGACTATGGCACATCCTCTGGCTTCTACTCAAAACACTaGCTTATTGCTGTCACTGCTGTCTCAGCTTTCTGTGTTGTGTCT | + |
Preference number: 2 (lower is better) Translates to: CYFDYGTSSGFYSKH*LIAVTAVSAFCVVS Trigger: AGACACAACACAGAAAGCTGAGACAGCAGTGACAGCAATAAGCAAGTGTTTTGAGTAGAAGCCAGAGGATGTGCCATAGTCAAAATAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215371.2 |
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3UTR-3UTR TCA 90 bp | CGACTAGGCCATCTTTTGATACATATGCAGCTAAAGACAAGAGCTCCTGGGTACGCACAAAGGCATGCATaGAACTCATTTTACATAATG | + |
Preference number: 2 (lower is better) Translates to: RLGHLLIHMQLKTRAPGYAQRHA*NSFYIM Trigger: CATTATGTAAAATGAGTTTCATGCATGCCTTTGTGC...GTACCCAGGAGCTCTTGTCTTTAGCTGCATATGTATCAAAAGATGGCCTAGTCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215371.2 |
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3UTR-3UTR TCA 90 bp | GCACATCCTCTGGCTTCTACTCAAAACACTTGCTTATTGCTGTCACTGCTGTCTGGAGGTTATTCTAGATaGGAAAGAAAATCCAAGGAA | + |
Preference number: 2 (lower is better) Translates to: AHPLASTQNTCLLLSLLSGGYSR*ERKSKE Trigger: TTCCTTGGATTTTCTTTCTCATCTAGAATAACCTCC...AGACAGCAGTGACAGCAATAAGCAAGTGTTTTGAGTAGAAGCCAGAGGATGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215371.2 |
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3UTR-3UTR GCA 90 bp | GCACATCCTCTGGCTTCTACTCAAAACACTTGCTTATTGCTGTCACTGCTGTCTCACAGCACAAAGGCATaGATGAAACTCATTTTACAT | + |
Preference number: 2 (lower is better) Translates to: AHPLASTQNTCLLLSLLSHSTKA*MKLILH Trigger: ATGTAAAATGAGTTTCATGCATGCCTTTGTGCTGTG...AGACAGCAGTGACAGCAATAAGCAAGTGTTTTGAGTAGAAGCCAGAGGATGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215371.2 |
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3UTR-3UTR CCA 90 bp | CGACTAGGCCATCTTTTGATACATATGCAGCTAAAGACAAGAGCTCCTGGGTACGTTATAATTTCTTTATaGATTGCCACAGGGCCCATT | + |
Preference number: 2 (lower is better) Translates to: RLGHLLIHMQLKTRAPGYVIISL*IATGPI Trigger: AATGGGCCCTGTGGCAATCCATAAAGAAATTATAAC...GTACCCAGGAGCTCTTGTCTTTAGCTGCATATGTATCAAAAGATGGCCTAGTCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215371.2 |
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3UTR CAA 90 bp | AAAGAAAATCCAAGGAAATCTGGAAGTGTCCATAACAGAATCAAGTaGGTCAGACCTATCTATGTCAGAAGCAAGAATAGTGTCCTTTTG | + |
Preference number: 2 (lower is better) Translates to: KENPRKSGSVHNRIK*VRPIYVRSKNSVLL Trigger: CAAAAGGACACTATTCTTGCTTCTGACATAGATAGGTCTGACCAACTTGATTCTGTTATGGACACTTCCAGATTTCCTTGGATTTTCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215371.2 |
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3UTR CAA 90 bp | TCCAAGACCACATTATCCCTGTTTATAGTTTTATTGTATAAGACTTaGAGAATTGTAACTCAGCAATACACACAGCACAAAGGCATGCAT | + |
Preference number: 2 (lower is better) Translates to: SKTTLSLFIVLLYKT*RIVTQQYTQHKGMH Trigger: ATGCATGCCTTTGTGCTGTGTGTATTGCTGAGTTACAATTCTCAAAGTCTTATACAATAAAACTATAAACAGGGATAATGTGGTCTTGGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215371.2 |
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3UTR GCA 72 bp | GCCCTGGAGTTCCCCTGTACTGGGGCATATAAAGTTTaGAAGTCCAATGGGCCTCTCTTTGCAGTGATGGCC | + |
Preference number: 3 (lower is better) Translates to: ALEFPCTGAYKV*KSNGPLFAVMA Trigger: GGCCATCACTGCAAAGAGAGGCCCATTGGACTTGCAAACTTTATATGCCCCAGTACAGGGGAACTCCAGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215371.2 |
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3UTR CCA 72 bp | GTTCCACCTATAGGGTTGCAGTTCCCTTTAGCTCCTTaGGTAATTTCTCTAGCTCCTCCATTGGGGGCCGTG | + |
Preference number: 3 (lower is better) Translates to: VPPIGLQFPLAP*VISLAPPLGAV Trigger: CACGGCCCCCAATGGAGGAGCTAGAGAAATTACCCAAGGAGCTAAAGGGAACTGCAACCCTATAGGTGGAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215371.2 |
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3UTR-3UTR CAA 90 bp | GCACATCCTCTGGCTTCTACTCAAAACACTTGCTTATTGCTGTCACTGCTGTCTGGACTGGAATTGGAATaGCCTTTGGAGCTGCTTCCA | + |
Preference number: 3 (lower is better) Translates to: AHPLASTQNTCLLLSLLSGLELE*PLELLP Trigger: TGGAAGCAGCTCCAAAGGCAATTCCAATTCCAGTCC...AGACAGCAGTGACAGCAATAAGCAAGTGTTTTGAGTAGAAGCCAGAGGATGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215371.2 |
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3UTR CCA 72 bp | TCAGCTTTCTGTGTTGTGTCTCTTGCTGTTCTCACATaGACTGGAATTGGAATTGCCTTTGGAGCTGCTTCC | + |
Preference number: 3 (lower is better) Translates to: SAFCVVSLAVLT*TGIGIAFGAAS Trigger: GGAAGCAGCTCCAAAGGCAATTCCAATTCCAGTCCATGTGAGAACAGCAAGAGACACAACACAGAAAGCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215371.2 |
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3UTR-3UTR CAA 90 bp | CGACTAGGCCATCTTTTGATACATATGCAGCTAAAGACAAGAGCTCCTGGGTACTCTCAGCTTTCTGTGTaGTGTCTCTTGCTGTTCTCA | + |
Preference number: 3 (lower is better) Translates to: RLGHLLIHMQLKTRAPGYSQLSV*CLLLFS Trigger: TGAGAACAGCAAGAGACACAACACAGAAAGCTGAGA...GTACCCAGGAGCTCTTGTCTTTAGCTGCATATGTATCAAAAGATGGCCTAGTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215371.2 |
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3UTR-3UTR CAA 90 bp | CGACTAGGCCATCTTTTGATACATATGCAGCTAAAGACAAGAGCTCCTGGGTACCAAAACACTTGCTTATaGCTGTCACTGCTGTCTCAG | + |
Preference number: 3 (lower is better) Translates to: RLGHLLIHMQLKTRAPGYQNTCL*LSLLSQ Trigger: CTGAGACAGCAGTGACAGCAATAAGCAAGTGTTTTG...GTACCCAGGAGCTCTTGTCTTTAGCTGCATATGTATCAAAAGATGGCCTAGTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215371.2 |
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3UTR GCA 72 bp | TGTCACTGCTGTCTCAGCTTTCTGTGTTGTGTCTCTTaGTGTTCTCACATGGACTGGAATTGGAATTGCCTT | + |
Preference number: 3 (lower is better) Translates to: CHCCLSFLCCVS*CSHMDWNWNCL Trigger: AAGGCAATTCCAATTCCAGTCCATGTGAGAACAGCAAGAGACACAACACAGAAAGCTGAGACAGCAGTGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215371.2 |
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3UTR GCA 72 bp | CACATCCTCTGGCTTCTACTCAAAACACTTGCTTATTaGTGTCACTGCTGTCTCAGCTTTCTGTGTTGTGTC | + |
Preference number: 3 (lower is better) Translates to: HILWLLLKTLAY*CHCCLSFLCCV Trigger: GACACAACACAGAAAGCTGAGACAGCAGTGACAGCAATAAGCAAGTGTTTTGAGTAGAAGCCAGAGGATGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215371.2 |
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3UTR GCA 72 bp | ACTATGGCACATCCTCTGGCTTCTACTCAAAACACTTaGTTATTGCTGTCACTGCTGTCTCAGCTTTCTGTG | + |
Preference number: 3 (lower is better) Translates to: TMAHPLASTQNT*LLLSLLSQLSV Trigger: CACAGAAAGCTGAGACAGCAGTGACAGCAATAAGCAAGTGTTTTGAGTAGAAGCCAGAGGATGTGCCATAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215371.2 |
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3UTR TCA 72 bp | ATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTGCAGTaGTGGCCGACTAGGCCATCTTTTGATACATATGCA | + |
Preference number: 3 (lower is better) Translates to: IKFASPMGLSLQ*WPTRPSFDTYA Trigger: TGCATATGTATCAAAAGATGGCCTAGTCGGCCATCACTGCAAAGAGAGGCCCATTGGACTTGCAAACTTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215371.2 |
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3UTR GCA 72 bp | TGGCTTCTACTCAAAACACTTGCTTATTGCTGTCACTaGTGTCTCAGCTTTCTGTGTTGTGTCTCTTGCTGT | + |
Preference number: 3 (lower is better) Translates to: WLLLKTLAYCCH*CLSFLCCVSCC Trigger: ACAGCAAGAGACACAACACAGAAAGCTGAGACAGCAGTGACAGCAATAAGCAAGTGTTTTGAGTAGAAGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215371.2 |
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3UTR-3UTR CAA 90 bp | CGACTAGGCCATCTTTTGATACATATGCAGCTAAAGACAAGAGCTCCTGGGTACTTTCAGCTTTCAACATaGGTGACCTCATTCATGGTA | + |
Preference number: 3 (lower is better) Translates to: RLGHLLIHMQLKTRAPGYFQLST*VTSFMV Trigger: TACCATGAATGAGGTCACCAATGTTGAAAGCTGAAA...GTACCCAGGAGCTCTTGTCTTTAGCTGCATATGTATCAAAAGATGGCCTAGTCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215371.2 |
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3UTR-3UTR CAA 90 bp | GCACATCCTCTGGCTTCTACTCAAAACACTTGCTTATTGCTGTCACTGCTGTCTATATATATATATATATaGGATATTCCCCCTGCCCCC | + |
Preference number: 3 (lower is better) Translates to: AHPLASTQNTCLLLSLLSIYIYI*DIPPAP Trigger: GGGGGCAGGGGGAATATCCAATATATATATATATAT...AGACAGCAGTGACAGCAATAAGCAAGTGTTTTGAGTAGAAGCCAGAGGATGTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215371.2 |
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3UTR CCA 72 bp | ATACATATGCAGCTAAAGACAAGAGCTCCTGGGTACTaGTTAGTTCATATTGTTGTTCCACCTATAGGGTTG | + |
Preference number: 3 (lower is better) Translates to: IHMQLKTRAPGY*LVHIVVPPIGL Trigger: CAACCCTATAGGTGGAACAACAATATGAACTAACCAGTACCCAGGAGCTCTTGTCTTTAGCTGCATATGTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215371.2 |
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3UTR CCA 72 bp | CAAGGAAATCTGGAAGTGTCCATAACAGAATCAAGTTaGTCAGACCTATCTATGTCAGAAGCAAGAATAGTG | + |
Preference number: 3 (lower is better) Translates to: QGNLEVSITESS*SDLSMSEARIV Trigger: CACTATTCTTGCTTCTGACATAGATAGGTCTGACCAACTTGATTCTGTTATGGACACTTCCAGATTTCCTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215371.2 |
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3UTR TCA 72 bp | TACTTTCTGTCCATGTTCTTTCTGTGCTTGTTATTTTaGCTATGGCACATCCTCTGGCTTCTACTCAAAACA | + |
Preference number: 3 (lower is better) Translates to: YFLSMFFLCLLF*LWHILWLLLKT Trigger: TGTTTTGAGTAGAAGCCAGAGGATGTGCCATAGTCAAAATAACAAGCACAGAAAGAACATGGACAGAAAGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215371.2 |
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3UTR CCA 72 bp | TCTTTTGATACATATGCAGCTAAAGACAAGAGCTCCTaGGTACTGGTTAGTTCATATTGTTGTTCCACCTAT | + |
Preference number: 3 (lower is better) Translates to: SFDTYAAKDKSS*VLVSSYCCSTY Trigger: ATAGGTGGAACAACAATATGAACTAACCAGTACCCAGGAGCTCTTGTCTTTAGCTGCATATGTATCAAAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215371.2 |
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3UTR-3UTR CAA 90 bp | CTTTTGGGGGATGGAATAATTCCTTTGCTAGCAAATCCTACATTTAGTTCTTGTCCTAGCGCTATAATATaGACTACTGAGAGAAAAGAT | + |
Preference number: 3 (lower is better) Translates to: LLGDGIIPLLANPTFSSCPSAII*TTERKD Trigger: ATCTTTTCTCTCAGTAGTCAATATTATAGCGCTAGG...ACAAGAACTAAATGTAGGATTTGCTAGCAAAGGAATTATTCCATCCCCCAAAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000215371.2 |
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3UTR CAA 72 bp | TGTTCCACCTATAGGGTTGCAGTTCCCTTTAGCTCCTaGGGTAATTTCTCTAGCTCCTCCATTGGGGGCCGT | + |
Preference number: 4 (lower is better) Translates to: CSTYRVAVPFSS*GNFSSSSIGGR Trigger: ACGGCCCCCAATGGAGGAGCTAGAGAAATTACCCAAGGAGCTAAAGGGAACTGCAACCCTATAGGTGGAACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215371.2 |
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3UTR CAA 72 bp | GCCTCTCTTTGCAGTGATGGCCGACTAGGCCATCTTTaGATACATATGCAGCTAAAGACAAGAGCTCCTGGG | + |
Preference number: 4 (lower is better) Translates to: ASLCSDGRLGHL*IHMQLKTRAPG Trigger: CCCAGGAGCTCTTGTCTTTAGCTGCATATGTATCAAAAGATGGCCTAGTCGGCCATCACTGCAAAGAGAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215371.2 |
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CDS-3UTR TCA 90 bp | TGGCACATCCTCTGGCTTCTACTCAAAACACTTGCTTATTGCTGTCACTGCTGTCACCACAAGCAAGCTTaGGTAGTGGGGGAATGTCAC | + |
Preference number: 4 (lower is better) Translates to: WHILWLLLKTLAYCCHCCHHKQA*VVGECH Trigger: GTGACATTCCCCCACTACTCAAGCTTGCTTGTGGTG...ACAGCAGTGACAGCAATAAGCAAGTGTTTTGAGTAGAAGCCAGAGGATGTGCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215371.2 |
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3UTR CAA 72 bp | TGTCTCTTGCTGTTCTCACATGGACTGGAATTGGAATaGCCTTTGGAGCTGCTTCCAGTGATGCTACTAGAC | + |
Preference number: 4 (lower is better) Translates to: CLLLFSHGLELE*PLELLPVMLLD Trigger: GTCTAGTAGCATCACTGGAAGCAGCTCCAAAGGCAATTCCAATTCCAGTCCATGTGAGAACAGCAAGAGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215371.2 |
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3UTR CAA 72 bp | CTGTCACTGCTGTCTCAGCTTTCTGTGTTGTGTCTCTaGCTGTTCTCACATGGACTGGAATTGGAATTGCCT | + |
Preference number: 4 (lower is better) Translates to: LSLLSQLSVLCL*LFSHGLELELP Trigger: AGGCAATTCCAATTCCAGTCCATGTGAGAACAGCAAGAGACACAACACAGAAAGCTGAGACAGCAGTGACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215371.2 |
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CDS-3UTR GCA 90 bp | GCACATCCTCTGGCTTCTACTCAAAACACTTGCTTATTGCTGTCACTGCTGTCTAAGTACATAGGGGTCTaGAGAGCAGAGTCAGTTCTT | + |
Preference number: 4 (lower is better) Translates to: AHPLASTQNTCLLLSLLSKYIGV*RAESVL Trigger: AAGAACTGACTCTGCTCTGCAGACCCCTATGTACTT...AGACAGCAGTGACAGCAATAAGCAAGTGTTTTGAGTAGAAGCCAGAGGATGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215371.2 |
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3UTR CAA 72 bp | GCACATCCTCTGGCTTCTACTCAAAACACTTGCTTATaGCTGTCACTGCTGTCTCAGCTTTCTGTGTTGTGT | + |
Preference number: 4 (lower is better) Translates to: AHPLASTQNTCL*LSLLSQLSVLC Trigger: ACACAACACAGAAAGCTGAGACAGCAGTGACAGCAATAAGCAAGTGTTTTGAGTAGAAGCCAGAGGATGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215371.2 |
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3UTR CAA 72 bp | GACTATGGCACATCCTCTGGCTTCTACTCAAAACACTaGCTTATTGCTGTCACTGCTGTCTCAGCTTTCTGT | + |
Preference number: 4 (lower is better) Translates to: DYGTSSGFYSKH*LIAVTAVSAFC Trigger: ACAGAAAGCTGAGACAGCAGTGACAGCAATAAGCAAGTGTTTTGAGTAGAAGCCAGAGGATGTGCCATAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215371.2 |
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CDS-3UTR CCA 90 bp | CGACTAGGCCATCTTTTGATACATATGCAGCTAAAGACAAGAGCTCCTGGGTACTTGTCCAGTCACAACTaGAATAATGCAGATCCAGCA | + |
Preference number: 4 (lower is better) Translates to: RLGHLLIHMQLKTRAPGYLSSHN*NNADPA Trigger: TGCTGGATCTGCATTATTCCAGTTGTGACTGGACAA...GTACCCAGGAGCTCTTGTCTTTAGCTGCATATGTATCAAAAGATGGCCTAGTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215371.2 |
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CDS-3UTR TCA 90 bp | CTTTTGGGGGATGGAATAATTCCTTTGCTAGCAAATCCTACATTTAGTTCTTGTAGCATCCACTGGAGTTaGGGGACATCAGAAAACCCT | + |
Preference number: 4 (lower is better) Translates to: LLGDGIIPLLANPTFSSCSIHWS*GTSENP Trigger: AGGGTTTTCTGATGTCCCTCAACTCCAGTGGATGCT...ACAAGAACTAAATGTAGGATTTGCTAGCAAAGGAATTATTCCATCCCCCAAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000215371.2 |
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CDS-3UTR GCA 90 bp | CGACTAGGCCATCTTTTGATACATATGCAGCTAAAGACAAGAGCTCCTGGGTACATATGCTTTTGGTTGTaGATATGTGATAGTAGCTGT | + |
Preference number: 4 (lower is better) Translates to: RLGHLLIHMQLKTRAPGYICFWL*ICDSSC Trigger: ACAGCTACTATCACATATGCACAACCAAAAGCATAT...GTACCCAGGAGCTCTTGTCTTTAGCTGCATATGTATCAAAAGATGGCCTAGTCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215371.2 |
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CDS-3UTR TCA 90 bp | CTTTTGGGGGATGGAATAATTCCTTTGCTAGCAAATCCTACATTTAGTTCTTGTGCATCCTTGGGATTGTaGCTGTTACATAGCAGATTT | + |
Preference number: 4 (lower is better) Translates to: LLGDGIIPLLANPTFSSCASLGL*LLHSRF Trigger: AAATCTGCTATGTAACAGTCACAATCCCAAGGATGC...ACAAGAACTAAATGTAGGATTTGCTAGCAAAGGAATTATTCCATCCCCCAAAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215371.2 |
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3UTR CAA 72 bp | TTACTTTCTGTCCATGTTCTTTCTGTGCTTGTTATTTaGACTATGGCACATCCTCTGGCTTCTACTCAAAAC | + |
Preference number: 4 (lower is better) Translates to: LLSVHVLSVLVI*TMAHPLASTQN Trigger: GTTTTGAGTAGAAGCCAGAGGATGTGCCATAGTCAAAATAACAAGCACAGAAAGAACATGGACAGAAAGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215371.2 |
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CDS-3UTR TCA 90 bp | CTTTTGGGGGATGGAATAATTCCTTTGCTAGCAAATCCTACATTTAGTTCTTGTACCACAACTATTAGATaGGATGAGCATGTGGAAAAG | + |
Preference number: 4 (lower is better) Translates to: LLGDGIIPLLANPTFSSCTTTIR*DEHVEK Trigger: CTTTTCCACATGCTCATCTCATCTAATAGTTGTGGT...ACAAGAACTAAATGTAGGATTTGCTAGCAAAGGAATTATTCCATCCCCCAAAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000215371.2 |
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3UTR CAA 72 bp | TTATGTACTCCTTCTAACAAGGCCATCTACCATAGCTaGGTTAGATCCACCATGATACTCTTAAATAAAACC | + |
Preference number: 4 (lower is better) Translates to: LCTPSNKAIYHS*VRSTMILLNKT Trigger: GGTTTTATTTAAGAGTATCATGGTGGATCTAACCAAGCTATGGTAGATGGCCTTGTTAGAAGGAGTACATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215371.2 |
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3UTR CAA 72 bp | GACATACAGCTATTGCTGTTTAGCTACTACAATTATTaGTTTTATTGCCAGTTTGACCTCTATTTCTGCCCC | + |
Preference number: 4 (lower is better) Translates to: DIQLLLFSYYNY*FYCQFDLYFCP Trigger: GGGGCAGAAATAGAGGTCAAACTGGCAATAAAACAAATAATTGTAGTAGCTAAACAGCAATAGCTGTATGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215371.2 |
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3UTR CAA 72 bp | GAGCTGCTTCCAGTGATGCTACTAGACATACAGCTATaGCTGTTTAGCTACTACAATTATTTGTTTTATTGC | + |
Preference number: 4 (lower is better) Translates to: ELLPVMLLDIQL*LFSYYNYLFYC Trigger: GCAATAAAACAAATAATTGTAGTAGCTAAACAGCAATAGCTGTATGTCTAGTAGCATCACTGGAAGCAGCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215371.2 |
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CDS-3UTR CCA 90 bp | CTTTTGGGGGATGGAATAATTCCTTTGCTAGCAAATCCTACATTTAGTTCTTGTCGACTGATATGCTTTTaGTTGTGCATATGTGATAGT | + |
Preference number: 4 (lower is better) Translates to: LLGDGIIPLLANPTFSSCRLICF*LCICDS Trigger: ACTATCACATATGCACAACCAAAAGCATATCAGTCG...ACAAGAACTAAATGTAGGATTTGCTAGCAAAGGAATTATTCCATCCCCCAAAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000215371.2 |
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CDS-3UTR CAA 90 bp | TGGCACATCCTCTGGCTTCTACTCAAAACACTTGCTTATTGCTGTCACTGCTGTAAGCATCCACTGGAGTaGAGGGACATCAGAAAACCC | + |
Preference number: 5 (lower is better) Translates to: WHILWLLLKTLAYCCHCCKHPLE*RDIRKP Trigger: GGGTTTTCTGATGTCCCTCAACTCCAGTGGATGCTT...ACAGCAGTGACAGCAATAAGCAAGTGTTTTGAGTAGAAGCCAGAGGATGTGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215371.2 |
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CDS-3UTR CAA 90 bp | TGGCACATCCTCTGGCTTCTACTCAAAACACTTGCTTATTGCTGTCACTGCTGTTCACCACAAGCAAGCTaGAGTAGTGGGGGAATGTCA | + |
Preference number: 5 (lower is better) Translates to: WHILWLLLKTLAYCCHCCSPQAS*SSGGMS Trigger: TGACATTCCCCCACTACTCAAGCTTGCTTGTGGTGA...ACAGCAGTGACAGCAATAAGCAAGTGTTTTGAGTAGAAGCCAGAGGATGTGCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215371.2 |
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CDS-3UTR CAA 90 bp | GCACATCCTCTGGCTTCTACTCAAAACACTTGCTTATTGCTGTCACTGCTGTCTACCTCCCTCCAGATGTaGCCAGTTTTAGAACGTTGC | + |
Preference number: 5 (lower is better) Translates to: AHPLASTQNTCLLLSLLSTSLQM*PVLERC Trigger: GCAACGTTCTAAAACTGGCAACATCTGGAGGGAGGT...AGACAGCAGTGACAGCAATAAGCAAGTGTTTTGAGTAGAAGCCAGAGGATGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215371.2 |
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CDS CCA 90 bp | ACAATAAGGCAAAGAGAAAATCTGGTAAGTTTGTCCAGTCACAACTaGAATAATGCAGATCCAGCAAGCAGCCACAAGCTGCACACAGAC | + |
Preference number: 5 (lower is better) Translates to: TIRQRENLVSLSSHN*NNADPASSHKLHTD Trigger: GTCTGTGTGCAGCTTGTGGCTGCTTGCTGGATCTGCATTATTCCAGTTGTGACTGGACAAACTTACCAGATTTTCTCTTTGCCTTATTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056435.5 ENSMUST00000215371.2 |
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CDS CCA 72 bp | CAAAGAGAAAATCTGGTAAGTTTGTCCAGTCACAACTaGAATAATGCAGATCCAGCAAGCAGCCACAAGCTG | + |
Preference number: 6 (lower is better) Translates to: QRENLVSLSSHN*NNADPASSHKL Trigger: CAGCTTGTGGCTGCTTGCTGGATCTGCATTATTCCAGTTGTGACTGGACAAACTTACCAGATTTTCTCTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056435.5 ENSMUST00000215371.2 |
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CDS CAA 90 bp | AATTTTGTTAGAGCCACAATAAGGCAAAGAGAAAATCTGGTAAGTTaGTCCAGTCACAACTGGAATAATGCAGATCCAGCAAGCAGCCAC | + |
Preference number: 6 (lower is better) Translates to: NFVRATIRQRENLVS*SSHNWNNADPASSH Trigger: GTGGCTGCTTGCTGGATCTGCATTATTCCAGTTGTGACTGGACAAACTTACCAGATTTTCTCTTTGCCTTATTGTGGCTCTAACAAAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056435.5 ENSMUST00000215371.2 |
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CDS GCA 72 bp | CTTTCCCAAGGTTTCCGACTGATATGCTTTTGGTTGTaGATATGTGATAGTAGCTGTTCCATAAAACAACAC | + |
Preference number: 6 (lower is better) Translates to: LSQGFRLICFWL*ICDSSCSIKQH Trigger: GTGTTGTTTTATGGAACAGCTACTATCACATATGCACAACCAAAAGCATATCAGTCGGAAACCTTGGGAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056435.5 ENSMUST00000215371.2 |
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CDS CAA 72 bp | CAGCTTTCCCAAGGTTTCCGACTGATATGCTTTTGGTaGTGCATATGTGATAGTAGCTGTTCCATAAAACAA | + |
Preference number: 6 (lower is better) Translates to: QLSQGFRLICFW*CICDSSCSIKQ Trigger: TTGTTTTATGGAACAGCTACTATCACATATGCACAACCAAAAGCATATCAGTCGGAAACCTTGGGAAAGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056435.5 ENSMUST00000215371.2 |