Pregenerated sensors for OLFR1120 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000081234Ensembl transcript IDs: ENSMUST00000058737.5, ENSMUST00000215163.3
Found 53 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTGGATGCTCACAGTCATCCATTGGATGGAACACAAAGTCCCCAATaGAGGAGCGGAGAAATACCCAGGGAGCTGAAGGGGACTGAAGCC | + |
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Preference number: 1 (lower is better) Translates to: VDAHSHPLDGTQSPQ*RSGEIPRELKGTEA Trigger: GGCTTCAGTCCCCTTCAGCTCCCTGGGTATTTCTCCGCTCCTTCATTGGGGACTTTGTGTTCCATCCAATGGATGACTGTGAGCATCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215163.3 |
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| 3UTR CCA 90 bp | GTGCCTGGCAAATACGGAAGTGGATGCTCACAGTCATCCATTGGATaGAACACAAAGTCCCCAATGAAGGAGCGGAGAAATACCCAGGGA | + |
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Preference number: 1 (lower is better) Translates to: VPGKYGSGCSQSSIG*NTKSPMKERRNTQG Trigger: TCCCTGGGTATTTCTCCGCTCCTTCATTGGGGACTTTGTGTTCCATCCAATGGATGACTGTGAGCATCCACTTCCGTATTTGCCAGGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215163.3 |
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| 3UTR TCA 90 bp | AATACCCATGGAAGGAGTTGCAGAGACAAAGATCAGAGCATAGACTaGAGAAATGACCAACCAGAGACTGCCCCACTTGGGGATAAAGCC | + |
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Preference number: 1 (lower is better) Translates to: NTHGRSCRDKDQSID*RNDQPETAPLGDKA Trigger: GGCTTTATCCCCAAGTGGGGCAGTCTCTGGTTGGTCATTTCTTCAGTCTATGCTCTGATCTTTGTCTCTGCAACTCCTTCCATGGGTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215163.3 |
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| 3UTR GCA 90 bp | ACACCAGTCAGAGTGGCTAAGATCAAAAATTCAGGTGACAGCAAATaGTGGCAAGGATGTGGAGAAAGAGGAACACTCCTCCATTGCTGG | + |
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Preference number: 1 (lower is better) Translates to: TPVRVAKIKNSGDSK*WQGCGERGTLLHCW Trigger: CCAGCAATGGAGGAGTGTTCCTCTTTCTCCACATCCTTGCCAGCATTTGCTGTCACCTGAATTTTTGATCTTAGCCACTCTGACTGGTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215163.3 |
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| 3UTR CCA 90 bp | ACACATGGTAGAACTTGTGGCTCTAGATATATTTGTAGCAGAGGATaGCCTAGTAGGTCATCAATGGGAGGAGAAGCCCTTGGTCCTGTG | + |
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Preference number: 1 (lower is better) Translates to: THGRTCGSRYICSRG*PSRSSMGGEALGPV Trigger: CACAGGACCAAGGGCTTCTCCTCCCATTGATGACCTACTAGGCCATCCTCTGCTACAAATATATCTAGAGCCACAAGTTCTACCATGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215163.3 |
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| 3UTR CCA 90 bp | GTGGAGAAAGAGGAACACTCCTCCATTGCTGGTGGTATTGCAAGCTaGTACAAACACTCTAAAAATCACTTTGGTGCTTCCTCAGAAAAT | + |
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Preference number: 1 (lower is better) Translates to: VEKEEHSSIAGGIAS*YKHSKNHFGASSEN Trigger: ATTTTCTGAGGAAGCACCAAAGTGATTTTTAGAGTGTTTGTACCAGCTTGCAATACCACCAGCAATGGAGGAGTGTTCCTCTTTCTCCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215163.3 |
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| 3UTR TCA 90 bp | AAGAAGAAGGAAGACCACAGTGTGGATACTTGTTCCTTCTTAGAATaGGGATCAAAATACCCATGGAAGGAGTTGCAGAGACAAAGATCA | + |
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Preference number: 1 (lower is better) Translates to: KKKEDHSVDTCSFLE*GSKYPWKELQRQRS Trigger: TGATCTTTGTCTCTGCAACTCCTTCCATGGGTATTTTGATCCTCATTCTAAGAAGGAACAAGTATCCACACTGTGGTCTTCCTTCTTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215163.3 |
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| 3UTR TCA 90 bp | ATCCCTAGTCCTTCCGTGGTCATAACTAAGAAGTCCATTAAGATTTaGGCTGGATTTAGCACAAAACCTTCTTTTCTGAAGTCTAAATTT | + |
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Preference number: 1 (lower is better) Translates to: IPSPSVVITKKSIKI*AGFSTKPSFLKSKF Trigger: AAATTTAGACTTCAGAAAAGAAGGTTTTGTGCTAAATCCAGCTCAAATCTTAATGGACTTCTTAGTTATGACCACGGAAGGACTAGGGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215163.3 |
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| 3UTR-3UTR CCA 90 bp | ACCACCAGTCACTCACACAGCCCCTATCAGGGCTCTAGAATTAATAAATCCTCTGCCAGTGACCAGGGATaGGGTTGGGGAGCGGGGGCG | + |
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Preference number: 2 (lower is better) Translates to: TTSHSHSPYQGSRINKSSASDQG*GWGAGA Trigger: CGCCCCCGCTCCCCAACCCCATCCCTGGTCACTGGC...AGAGGATTTATTAATTCTAGAGCCCTGATAGGGGCTGTGTGAGTGACTGGTGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000215163.3 |
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| 3UTR-3UTR GCA 90 bp | ACCACCAGTCACTCACACAGCCCCTATCAGGGCTCTAGAATTAATAAATCCTCTCGGGAAGAACCCAGATaGCCCTCAACAGAGGAATGG | + |
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Preference number: 2 (lower is better) Translates to: TTSHSHSPYQGSRINKSSREEPR*PSTEEW Trigger: CCATTCCTCTGTTGAGGGGCATCTGGGTTCTTCCCG...AGAGGATTTATTAATTCTAGAGCCCTGATAGGGGCTGTGTGAGTGACTGGTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215163.3 |
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| 3UTR-3UTR TCA 90 bp | CATGAAACTCAAGAAGAAGGAAGACCACAGTGTGGATACTTGTTCCTTCTTAGAATAGGGGAATGCCAGTaGCCAGGGATGGGGTTGGGG | + |
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Preference number: 2 (lower is better) Translates to: HETQEEGRPQCGYLFLLRIGECQ*PGMGLG Trigger: CCCCAACCCCATCCCTGGTCACTGGCATTCCCCTAT...TCTAAGAAGGAACAAGTATCCACACTGTGGTCTTCCTTCTTCTTGAGTTTCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215163.3 |
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| 3UTR-3UTR TCA 90 bp | ACATTGTCAACTGCTGTGGATAATCTAAAGCAGTTCCATGTCCCATACCTGAAAAAGCCCTTGGTCCTGTaGAGGCTCTATGCCCCAGTA | + |
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Preference number: 2 (lower is better) Translates to: TLSTAVDNLKQFHVPYLKKPLVL*RLYAPV Trigger: TACTGGGGCATAGAGCCTTCACAGGACCAAGGGCTT...TTTCAGGTATGGGACATGGAACTGCTTTAGATTATCCACAGCAGTTGACAATGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215163.3 |
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| 3UTR-3UTR CCA 90 bp | ACCACCAGTCACTCACACAGCCCCTATCAGGGCTCTAGAATTAATAAATCCTCTCTCACAGTCATCCATTaGATGGAACACAAAGTCCCC | + |
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Preference number: 2 (lower is better) Translates to: TTSHSHSPYQGSRINKSSLTVIH*MEHKVP Trigger: GGGGACTTTGTGTTCCATCCAATGGATGACTGTGAG...AGAGGATTTATTAATTCTAGAGCCCTGATAGGGGCTGTGTGAGTGACTGGTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215163.3 |
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| 3UTR-3UTR TCA 90 bp | ACATTGTCAACTGCTGTGGATAATCTAAAGCAGTTCCATGTCCCATACCTGAAACATAGACTGAAGAAATaGCCAACCAGAGACTGCCCC | + |
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Preference number: 2 (lower is better) Translates to: TLSTAVDNLKQFHVPYLKHRLKK*PTRDCP Trigger: GGGGCAGTCTCTGGTTGGTCATTTCTTCAGTCTATG...TTTCAGGTATGGGACATGGAACTGCTTTAGATTATCCACAGCAGTTGACAATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215163.3 |
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| 3UTR CAA 90 bp | AAAACACATGAAACTCAAGAAGAAGGAAGACCACAGTGTGGATACTaGTTCCTTCTTAGAATGAGGATCAAAATACCCATGGAAGGAGTT | + |
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Preference number: 2 (lower is better) Translates to: KTHETQEEGRPQCGY*FLLRMRIKIPMEGV Trigger: AACTCCTTCCATGGGTATTTTGATCCTCATTCTAAGAAGGAACAAGTATCCACACTGTGGTCTTCCTTCTTCTTGAGTTTCATGTGTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215163.3 |
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| 3UTR-3UTR GCA 90 bp | TATGCAAGCTTTCAGAGGAGAGAAACAATTAAACAATCACAGTCAGTTTCAACAACTACTGCTCTCAACTaGATACATGTATATGCACAC | + |
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Preference number: 2 (lower is better) Translates to: YASFQRRETIKQSQSVSTTTALN*IHVYAH Trigger: GTGTGCATATACATGTATGCAGTTGAGAGCAGTAGT...TGTTGAAACTGACTGTGATTGTTTAATTGTTTCTCTCCTCTGAAAGCTTGCATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215163.3 |
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| 3UTR TCA 72 bp | AACCCAGACACTAGGCAGATGCCAACAAGAGCCTGCTaGCAGGAGCCTGATATAGCTCTCTCCTGTGAGTCT | + |
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Preference number: 3 (lower is better) Translates to: NPDTRQMPTRAC*QEPDIALSCES Trigger: AGACTCACAGGAGAGAGCTATATCAGGCTCCTGTCAGCAGGCTCTTGTTGGCATCTGCCTAGTGTCTGGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215163.3 |
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| 3UTR TCA 72 bp | GGAAGGAGTTGCAGAGACAAAGATCAGAGCATAGACTaGAGAAATGACCAACCAGAGACTGCCCCACTTGGG | + |
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Preference number: 3 (lower is better) Translates to: GRSCRDKDQSID*RNDQPETAPLG Trigger: CCCAAGTGGGGCAGTCTCTGGTTGGTCATTTCTTCAGTCTATGCTCTGATCTTTGTCTCTGCAACTCCTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215163.3 |
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| 3UTR CCA 72 bp | TGGCAAATACGGAAGTGGATGCTCACAGTCATCCATTaGATGGAACACAAAGTCCCCAATGAAGGAGCGGAG | + |
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Preference number: 3 (lower is better) Translates to: WQIRKWMLTVIH*MEHKVPNEGAE Trigger: CTCCGCTCCTTCATTGGGGACTTTGTGTTCCATCCAATGGATGACTGTGAGCATCCACTTCCGTATTTGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215163.3 |
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| 3UTR TCA 72 bp | TTTGTGCAGGACTTCTTGACAAACCTCAAACAACAGTaGCTAACAGCATCCAACCACCAGTCACTCACACAG | + |
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Preference number: 3 (lower is better) Translates to: FVQDFLTNLKQQ*LTASNHQSLTQ Trigger: CTGTGTGAGTGACTGGTGGTTGGATGCTGTTAGTCACTGTTGTTTGAGGTTTGTCAAGAAGTCCTGCACAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215163.3 |
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| 3UTR GCA 72 bp | AGAGTGGCTAAGATCAAAAATTCAGGTGACAGCAAATaGTGGCAAGGATGTGGAGAAAGAGGAACACTCCTC | + |
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Preference number: 3 (lower is better) Translates to: RVAKIKNSGDSK*WQGCGERGTLL Trigger: GAGGAGTGTTCCTCTTTCTCCACATCCTTGCCAGCATTTGCTGTCACCTGAATTTTTGATCTTAGCCACTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215163.3 |
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| 3UTR CCA 72 bp | AAATACGGAAGTGGATGCTCACAGTCATCCATTGGATaGAACACAAAGTCCCCAATGAAGGAGCGGAGAAAT | + |
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Preference number: 3 (lower is better) Translates to: KYGSGCSQSSIG*NTKSPMKERRN Trigger: ATTTCTCCGCTCCTTCATTGGGGACTTTGTGTTCCATCCAATGGATGACTGTGAGCATCCACTTCCGTATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215163.3 |
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| 3UTR CCA 72 bp | GAGGAACACTCCTCCATTGCTGGTGGTATTGCAAGCTaGTACAAACACTCTAAAAATCACTTTGGTGCTTCC | + |
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Preference number: 3 (lower is better) Translates to: EEHSSIAGGIAS*YKHSKNHFGAS Trigger: GGAAGCACCAAAGTGATTTTTAGAGTGTTTGTACCAGCTTGCAATACCACCAGCAATGGAGGAGTGTTCCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215163.3 |
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| 3UTR-3UTR CAA 90 bp | ACCACCAGTCACTCACACAGCCCCTATCAGGGCTCTAGAATTAATAAATCCTCTGTACAAGGCAAAACATaGTCAACTGCTGTGGATAAT | + |
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Preference number: 3 (lower is better) Translates to: TTSHSHSPYQGSRINKSSVQGKT*STAVDN Trigger: ATTATCCACAGCAGTTGACAATGTTTTGCCTTGTAC...AGAGGATTTATTAATTCTAGAGCCCTGATAGGGGCTGTGTGAGTGACTGGTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215163.3 |
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| 3UTR TCA 72 bp | GAAGACCACAGTGTGGATACTTGTTCCTTCTTAGAATaGGGATCAAAATACCCATGGAAGGAGTTGCAGAGA | + |
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Preference number: 3 (lower is better) Translates to: EDHSVDTCSFLE*GSKYPWKELQR Trigger: TCTCTGCAACTCCTTCCATGGGTATTTTGATCCTCATTCTAAGAAGGAACAAGTATCCACACTGTGGTCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215163.3 |
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| 3UTR TCA 72 bp | CTCTTAACGGTACCAAGATTTCCTAAAAAGAAGTTATaGCCAAAGCTACCTGCAGCTGACAAAATCATGCCC | + |
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Preference number: 3 (lower is better) Translates to: LLTVPRFPKKKL*PKLPAADKIMP Trigger: GGGCATGATTTTGTCAGCTGCAGGTAGCTTTGGTCATAACTTCTTTTTAGGAAATCTTGGTACCGTTAAGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215163.3 |
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| 3UTR GCA 72 bp | CCATCAGACAGAGAACAACAGGAAAGTGATGACTACTaGTCTCAACTGCATACATGTATATGCACACACAAA | + |
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Preference number: 3 (lower is better) Translates to: PSDREQQESDDY*SQLHTCICTHK Trigger: TTTGTGTGTGCATATACATGTATGCAGTTGAGAGCAGTAGTCATCACTTTCCTGTTGTTCTCTGTCTGATGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215163.3 |
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| 3UTR TCA 72 bp | AAGTACCTTCTTAAAATATTAGGTGTTTTTCAACCCTaGGATTCCACCTCACACCAGTCAGAGTGGCTAAGA | + |
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Preference number: 3 (lower is better) Translates to: KYLLKILGVFQP*DSTSHQSEWLR Trigger: TCTTAGCCACTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGAAAAACACCTAATATTTTAAGAAGGTACTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215163.3 |
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| 3UTR TCA 72 bp | CCTTCCGTGGTCATAACTAAGAAGTCCATTAAGATTTaGGCTGGATTTAGCACAAAACCTTCTTTTCTGAAG | + |
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Preference number: 3 (lower is better) Translates to: PSVVITKKSIKI*AGFSTKPSFLK Trigger: CTTCAGAAAAGAAGGTTTTGTGCTAAATCCAGCTCAAATCTTAATGGACTTCTTAGTTATGACCACGGAAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215163.3 |
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| CDS-3UTR GCA 90 bp | GGAGAAGCCCTTGGTCCTGTGAAGGCTCTATGCCCCAGTATAGGGGAATGCCAGAGTGGAGAAAGCTTTTaGCCGTCCTGTGGCTGTTGG | + |
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Preference number: 4 (lower is better) Translates to: GEALGPVKALCPSIGECQSGESF*PSCGCW Trigger: CCAACAGCCACAGGACGGGCAAAAGCTTTCTCCACT...CTGGCATTCCCCTATACTGGGGCATAGAGCCTTCACAGGACCAAGGGCTTCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000215163.3 |
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| CDS-3UTR CCA 90 bp | GGAGAAGCCCTTGGTCCTGTGAAGGCTCTATGCCCCAGTATAGGGGAATGCCAGCTTTTGCCCGTCCTGTaGCTGTTGGCAACTTTAGAA | + |
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Preference number: 4 (lower is better) Translates to: GEALGPVKALCPSIGECQLLPVL*LLATLE Trigger: TTCTAAAGTTGCCAACAGCCACAGGACGGGCAAAAG...CTGGCATTCCCCTATACTGGGGCATAGAGCCTTCACAGGACCAAGGGCTTCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000215163.3 |
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| 3UTR CAA 72 bp | CTGGCAAGGATGTGGAGAAAGAGGAACACTCCTCCATaGCTGGTGGTATTGCAAGCTGGTACAAACACTCTA | + |
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Preference number: 4 (lower is better) Translates to: LARMWRKRNTPP*LVVLQAGTNTL Trigger: TAGAGTGTTTGTACCAGCTTGCAATACCACCAGCAATGGAGGAGTGTTCCTCTTTCTCCACATCCTTGCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215163.3 |
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| CDS-3UTR TCA 90 bp | ACATTGTCAACTGCTGTGGATAATCTAAAGCAGTTCCATGTCCCATACCTGAAACCCCACAGGCCAGCTTaGGAATTGGGGGAACATCAC | + |
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Preference number: 4 (lower is better) Translates to: TLSTAVDNLKQFHVPYLKPHRPA*ELGEHH Trigger: GTGATGTTCCCCCAATTCTCAAGCTGGCCTGTGGGG...TTTCAGGTATGGGACATGGAACTGCTTTAGATTATCCACAGCAGTTGACAATGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215163.3 |
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| CDS-3UTR TCA 90 bp | TATGCAAGCTTTCAGAGGAGAGAAACAATTAAACAATCACAGTCAGTTTCAACAGAGAAACTGTGTCACTaGGGTTGCATTATCCATGGC | + |
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Preference number: 4 (lower is better) Translates to: YASFQRRETIKQSQSVSTEKLCH*GCIIHG Trigger: GCCATGGATAATGCAACCTCAGTGACACAGTTTCTC...TGTTGAAACTGACTGTGATTGTTTAATTGTTTCTCTCCTCTGAAAGCTTGCATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215163.3 |
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| CDS-3UTR TCA 90 bp | ATTGGCCACAGAATTGTAGCAACAGGGAGGAGAATCTGCAAAATTGTATTTCTAAGGAAGAAAAACATTTaGATAGCACAGGCCAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: IGHRIVATGRRICKIVFLRKKNI*IAQARR Trigger: TCTCCTGGCCTGTGCTATTCAAATGTTTTTCTTCCT...TAGAAATACAATTTTGCAGATTCTCCTCCCTGTTGCTACAATTCTGTGGCCAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215163.3 |
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| 3UTR CAA 72 bp | GAAACTCAAGAAGAAGGAAGACCACAGTGTGGATACTaGTTCCTTCTTAGAATGAGGATCAAAATACCCATG | + |
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Preference number: 4 (lower is better) Translates to: ETQEEGRPQCGY*FLLRMRIKIPM Trigger: CATGGGTATTTTGATCCTCATTCTAAGAAGGAACAAGTATCCACACTGTGGTCTTCCTTCTTCTTGAGTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215163.3 |
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| CDS-3UTR CCA 90 bp | ATTGGCCACAGAATTGTAGCAACAGGGAGGAGAATCTGCAAAATTGTATTTCTATTCCTACAGAATGAATaGACTTTGGCCTCAAGTAGT | + |
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Preference number: 4 (lower is better) Translates to: IGHRIVATGRRICKIVFLFLQNE*TLASSS Trigger: ACTACTTGAGGCCAAAGTCCATTCATTCTGTAGGAA...TAGAAATACAATTTTGCAGATTCTCCTCCCTGTTGCTACAATTCTGTGGCCAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215163.3 |
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| 3UTR CAA 72 bp | AGAGAAATGTTAGGTATAGCCAGACTTTTGGCTACTTaGTGGGTTCTTTTCTTCCACACTTATTCAACCCTT | + |
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Preference number: 4 (lower is better) Translates to: REMLGIARLLAT*WVLFFHTYSTL Trigger: AAGGGTTGAATAAGTGTGGAAGAAAAGAACCCACAAAGTAGCCAAAAGTCTGGCTATACCTAACATTTCTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215163.3 |
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| CDS-3UTR GCA 90 bp | CATGAAACTCAAGAAGAAGGAAGACCACAGTGTGGATACTTGTTCCTTCTTAGATGCAGGATCAATTCTTaGTATAACAAGTATAGAGGT | + |
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Preference number: 4 (lower is better) Translates to: HETQEEGRPQCGYLFLLRCRINS*YNKYRG Trigger: ACCTCTATACTTGTTATAGCAAGAATTGATCCTGCA...TCTAAGAAGGAACAAGTATCCACACTGTGGTCTTCCTTCTTCTTGAGTTTCATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215163.3 |
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| CDS-3UTR CCA 90 bp | AGCTTTCAGAGGAGAGAAACAATTAAACAATCACAGTCAGTTTCAACATCTATGAGGTTGCATTATCCATaGCACTGTTCTCTGAGTGTT | + |
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Preference number: 4 (lower is better) Translates to: SFQRRETIKQSQSVSTSMRLHYP*HCSLSV Trigger: AACACTCAGAGAACAGTGCCATGGATAATGCAACCT...CATAGATGTTGAAACTGACTGTGATTGTTTAATTGTTTCTCTCCTCTGAAAGCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215163.3 |
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| CDS-3UTR CCA 90 bp | ATTGGCCACAGAATTGTAGCAACAGGGAGGAGAATCTGCAAAATTGTATTTCTACCAGGAAATAATACATaGGTTTTTGTAGTGCAGGAT | + |
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Preference number: 4 (lower is better) Translates to: IGHRIVATGRRICKIVFLPGNNT*VFVVQD Trigger: ATCCTGCACTACAAAAACCCATGTATTATTTCCTGG...TAGAAATACAATTTTGCAGATTCTCCTCCCTGTTGCTACAATTCTGTGGCCAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215163.3 |
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| 3UTR CAA 72 bp | GGTAAACATAGAGAAATGTTAGGTATAGCCAGACTTTaGGCTACTTTGTGGGTTCTTTTCTTCCACACTTAT | + |
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Preference number: 4 (lower is better) Translates to: GKHREMLGIARL*ATLWVLFFHTY Trigger: ATAAGTGTGGAAGAAAAGAACCCACAAAGTAGCCAAAAGTCTGGCTATACCTAACATTTCTCTATGTTTACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215163.3 |
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| CDS-3UTR CAA 90 bp | GGAGAAGCCCTTGGTCCTGTGAAGGCTCTATGCCCCAGTATAGGGGAATGCCAGTCCCCACAGGCCAGCTaGAGAATTGGGGGAACATCA | + |
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Preference number: 5 (lower is better) Translates to: GEALGPVKALCPSIGECQSPQAS*RIGGTS Trigger: TGATGTTCCCCCAATTCTCAAGCTGGCCTGTGGGGA...CTGGCATTCCCCTATACTGGGGCATAGAGCCTTCACAGGACCAAGGGCTTCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000215163.3 |
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| CDS-3UTR CAA 90 bp | GGAGAAGCCCTTGGTCCTGTGAAGGCTCTATGCCCCAGTATAGGGGAATGCCAGCCCAAACAGAAATGTTaGCAGGTTAGGTACGCCAGA | + |
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Preference number: 5 (lower is better) Translates to: GEALGPVKALCPSIGECQPKQKC*QVRYAR Trigger: TCTGGCGTACCTAACCTGCAAACATTTCTGTTTGGG...CTGGCATTCCCCTATACTGGGGCATAGAGCCTTCACAGGACCAAGGGCTTCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215163.3 |
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| CDS-3UTR CAA 90 bp | ACCACCAGTCACTCACACAGCCCCTATCAGGGCTCTAGAATTAATAAATCCTCTACAAATTCCTCTGTCTaGTGTCCAAAGATTGTAGAG | + |
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Preference number: 5 (lower is better) Translates to: TTSHSHSPYQGSRINKSSTNSSV*CPKIVE Trigger: CTCTACAATCTTTGGACACAAGACAGAGGAATTTGT...AGAGGATTTATTAATTCTAGAGCCCTGATAGGGGCTGTGTGAGTGACTGGTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215163.3 |
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| CDS GCA 90 bp | AAGATAACCACATACATTATGGAAAACATCCCAAACAGAAATGTTTaGAGGTTAGGTACGCCAGAGAACCCCAGTAAGAGAAACTGTGTC | + |
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Preference number: 5 (lower is better) Translates to: KITTYIMENIPNRNV*RLGTPENPSKRNCV Trigger: GACACAGTTTCTCTTACTGGGGTTCTCTGGCGTACCTAACCTGCAAACATTTCTGTTTGGGATGTTTTCCATAATGTATGTGGTTATCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058737.5 ENSMUST00000215163.3 |
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| CDS-3UTR CAA 90 bp | TGCTCTACTATGTTCATAGCAGCCTTATTTTTAATAGCCAGAAGCCGGGAAGAACTGTATATTAGGGGATaGAACATGGGGGTCACAATT | + |
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Preference number: 5 (lower is better) Translates to: CSTMFIAALFLIARSREELYIRG*NMGVTI Trigger: AATTGTGACCCCCATGTTCAATCCCCTAATATACAG...TTCTTCCCGGCTTCTGGCTATTAAAAATAAGGCTGCTATGAACATAGTAGAGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000215163.3 |
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| CDS-3UTR CAA 90 bp | TGCTCTACTATGTTCATAGCAGCCTTATTTTTAATAGCCAGAAGCCGGGAAGAAGCTGCAATCACATCCTaGTTTCTGAGGCTGTATATT | + |
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Preference number: 5 (lower is better) Translates to: CSTMFIAALFLIARSREEAAITS*FLRLYI Trigger: AATATACAGCCTCAGAAACAAGGATGTGATTGCAGC...TTCTTCCCGGCTTCTGGCTATTAAAAATAAGGCTGCTATGAACATAGTAGAGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215163.3 |
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| CDS-3UTR CAA 90 bp | GTAAGTATAGGCATGAATCCTCTTCAAAACAACCTCTCTTTAAAGCAACTAGAAACTGTGTCACTGAGGTaGCATTATCCATGGCACTGT | + |
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Preference number: 5 (lower is better) Translates to: VSIGMNPLQNNLSLKQLETVSLR*HYPWHC Trigger: ACAGTGCCATGGATAATGCAACCTCAGTGACACAGT...TTCTAGTTGCTTTAAAGAGAGGTTGTTTTGAAGAGGATTCATGCCTATACTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215163.3 |
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| CDS-3UTR CAA 90 bp | ATTGGCCACAGAATTGTAGCAACAGGGAGGAGAATCTGCAAAATTGTATTTCTAACATGGGGGTCACAATaGTGTAAAACAGAGAGAGTA | + |
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Preference number: 5 (lower is better) Translates to: IGHRIVATGRRICKIVFLTWGSQ*CKTERV Trigger: TACTCTCTCTGTTTTACACAATTGTGACCCCCATGT...TAGAAATACAATTTTGCAGATTCTCCTCCCTGTTGCTACAATTCTGTGGCCAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000215163.3 |
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| CDS CAA 72 bp | CAGAGAACCCCAGTAAGAGAAACTGTGTCACTGAGGTaGCATTATCCATGGCACTGTTCTCTGAGTGTTCCA | + |
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Preference number: 6 (lower is better) Translates to: QRTPVRETVSLR*HYPWHCSLSVP Trigger: TGGAACACTCAGAGAACAGTGCCATGGATAATGCAACCTCAGTGACACAGTTTCTCTTACTGGGGTTCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058737.5 ENSMUST00000215163.3 |
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| CDS CAA 72 bp | TTGAATAGCACAGGCCAGGAGACAAATTCCTCTGTCTaGTGTCCAAAGATTGTAGAGAATGCGGGGAAGGGT | + |
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Preference number: 6 (lower is better) Translates to: LNSTGQETNSSV*CPKIVENAGKG Trigger: ACCCTTCCCCGCATTCTCTACAATCTTTGGACACAAGACAGAGGAATTTGTCTCCTGGCCTGTGCTATTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058737.5 ENSMUST00000215163.3 |
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| CDS GCA 72 bp | ACATACATTATGGAAAACATCCCAAACAGAAATGTTTaGAGGTTAGGTACGCCAGAGAACCCCAGTAAGAGA | + |
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Preference number: 6 (lower is better) Translates to: TYIMENIPNRNV*RLGTPENPSKR Trigger: TCTCTTACTGGGGTTCTCTGGCGTACCTAACCTGCAAACATTTCTGTTTGGGATGTTTTCCATAATGTATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058737.5 ENSMUST00000215163.3 |
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