Pregenerated sensors for OLFR112 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051611Ensembl transcript IDs: ENSMUST00000085548.4, ENSMUST00000174798.3, ENSMUST00000208832.2, ENSMUST00000213274.2
Found 23 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GGTGGATTGAACAGTCCAATATCTGAAGAGGTAAAATGTCTGGTGATCAGTCATAAGGTGGATTACTACTaGAATACAAATCTCCACAGA | + |
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Preference number: 2 (lower is better) Translates to: GGLNSPISEEVKCLVISHKVDYY*NTNLHR Trigger: TCTGTGGAGATTTGTATTTCAGTAGTAATCCACCTT...ATGACTGATCACCAGACATTTTACCTCTTCAGATATTGGACTGTTCAATCCACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213274.2 |
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| 3UTR-3UTR GCA 90 bp | AATCTCCACAGATCTGAGTGCTGTTTATCAATATATTTCATGCATCTGGTAGGAGTTTTAGAAGAGAAGTaGCTTTACCTTACATTGCTA | + |
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Preference number: 2 (lower is better) Translates to: NLHRSECCLSIYFMHLVGVLEEK*LYLTLL Trigger: TAGCAATGTAAGGTAAAGGCACTTCTCTTCTAAAAC...TCCTACCAGATGCATGAAATATATTGATAAACAGCACTCAGATCTGTGGAGATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213274.2 |
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| 3UTR-3UTR CAA 90 bp | GGTGGATTGAACAGTCCAATATCTGAAGAGGTAAAATGTCTGGTGATCAGTCATATTTGTGTTTCCATTTaGGTGATTTTGCCTCAGCAA | + |
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Preference number: 3 (lower is better) Translates to: GGLNSPISEEVKCLVISHICVSI*VILPQQ Trigger: TTGCTGAGGCAAAATCACCAAAATGGAAACACAAAT...ATGACTGATCACCAGACATTTTACCTCTTCAGATATTGGACTGTTCAATCCACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213274.2 |
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| 3UTR-3UTR CAA 90 bp | AATCTCCACAGATCTGAGTGCTGTTTATCAATATATTTCATGCATCTGGTAGGAAGAAATATACCGAGATaGTCAGTGTGTCTGCATGTA | + |
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Preference number: 3 (lower is better) Translates to: NLHRSECCLSIYFMHLVGRNIPR*SVCLHV Trigger: TACATGCAGACACACTGACAATCTCGGTATATTTCT...TCCTACCAGATGCATGAAATATATTGATAAACAGCACTCAGATCTGTGGAGATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213274.2 |
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| 3UTR-3UTR CAA 90 bp | AATCTCCACAGATCTGAGTGCTGTTTATCAATATATTTCATGCATCTGGTAGGATCCATTTTGGTGATTTaGCCTCAGCAAAAGTGTAAG | + |
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Preference number: 3 (lower is better) Translates to: NLHRSECCLSIYFMHLVGSILVI*PQQKCK Trigger: CTTACACTTTTGCTGAGGCAAAATCACCAAAATGGA...TCCTACCAGATGCATGAAATATATTGATAAACAGCACTCAGATCTGTGGAGATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213274.2 |
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| 3UTR TCA 72 bp | GGTGGATTACTACTGAAATACAAATCTCCACAGATCTaGGTGCTGTTTATCAATATATTTCATGCATCTGGT | + |
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Preference number: 3 (lower is better) Translates to: GGLLLKYKSPQI*VLFINIFHASG Trigger: ACCAGATGCATGAAATATATTGATAAACAGCACTCAGATCTGTGGAGATTTGTATTTCAGTAGTAATCCACC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213274.2 |
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| CDS-3UTR TCA 90 bp | GGTGGATTGAACAGTCCAATATCTGAAGAGGTAAAATGTCTGGTGATCAGTCATCATAAGACATCACTGTaGGAATGGCCAGCTCACCCC | + |
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Preference number: 4 (lower is better) Translates to: GGLNSPISEEVKCLVISHHKTSL*EWPAHP Trigger: GGGGTGAGCTGGCCATTCTCACAGTGATGTCTTATG...ATGACTGATCACCAGACATTTTACCTCTTCAGATATTGGACTGTTCAATCCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213274.2 |
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| CDS-3UTR CCA 90 bp | AATCTCCACAGATCTGAGTGCTGTTTATCAATATATTTCATGCATCTGGTAGGAGAACTGTCAACATACTaGGGAACTGTGACAGAGAGG | + |
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Preference number: 4 (lower is better) Translates to: NLHRSECCLSIYFMHLVGELSTY*GTVTER Trigger: CCTCTCTGTCACAGTTCCCCAGTATGTTGACAGTTC...TCCTACCAGATGCATGAAATATATTGATAAACAGCACTCAGATCTGTGGAGATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213274.2 |
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| CDS-3UTR GCA 90 bp | AATCTCCACAGATCTGAGTGCTGTTTATCAATATATTTCATGCATCTGGTAGGAACAGGCAAAGGAAACTaGAGTCAGGAAACTAACCAT | + |
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Preference number: 4 (lower is better) Translates to: NLHRSECCLSIYFMHLVGTGKGN*SQETNH Trigger: ATGGTTAGTTTCCTGACTGCAGTTTCCTTTGCCTGT...TCCTACCAGATGCATGAAATATATTGATAAACAGCACTCAGATCTGTGGAGATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213274.2 |
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| 3UTR CAA 72 bp | AGAATGCAATGTAATTTACATGTTTCTGCAGGTGGATaGAACAGTCCAATATCTGAAGAGGTAAAATGTCTG | + |
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Preference number: 4 (lower is better) Translates to: RMQCNLHVSAGG*NSPISEEVKCL Trigger: CAGACATTTTACCTCTTCAGATATTGGACTGTTCAATCCACCTGCAGAAACATGTAAATTACATTGCATTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213274.2 |
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| CDS GCA 90 bp | GAGCCGACTAGGTATGTCACCAAGAAGAGCACAGCCTGTACGATCTaGAGCTCATGGTTGTCAGAGAATCCCATGAGGAGGAATCCTCTC | + |
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Preference number: 5 (lower is better) Translates to: EPTRYVTKKSTACTI*SSWLSENPMRRNPL Trigger: GAGAGGATTCCTCCTCATGGGATTCTCTGACAACCATGAGCTGCAGATCGTACAGGCTGTGCTCTTCTTGGTGACATACCTAGTCGGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085548.4 ENSMUST00000174798.3 ENSMUST00000208832.2 ENSMUST00000213274.2 |
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| CDS TCA 90 bp | TGTAGCCACTTTGTGCCAGGGAACTGTCAACATACTGGGGAACTGTaGCAGAGAGGGATGAGAGGTCCAGAATGGAAAGGTGCTTCAGAA | + |
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Preference number: 5 (lower is better) Translates to: CSHFVPGNCQHTGEL*QRGMRGPEWKGASE Trigger: TTCTGAAGCACCTTTCCATTCTGGACCTCTCATCCCTCTCTGTCACAGTTCCCCAGTATGTTGACAGTTCCCTGGCACAAAGTGGCTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085548.4 ENSMUST00000174798.3 ENSMUST00000208832.2 ENSMUST00000213274.2 |
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| CDS TCA 90 bp | TGCCAGGGAACTGTCAACATACTGGGGAACTGTGACAGAGAGGGATaGGAGGTCCAGAATGGAAAGGTGCTTCAGAAAGTAATACATTGG | + |
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Preference number: 5 (lower is better) Translates to: CQGTVNILGNCDREG*EVQNGKVLQKVIHW Trigger: CCAATGTATTACTTTCTGAAGCACCTTTCCATTCTGGACCTCTCATCCCTCTCTGTCACAGTTCCCCAGTATGTTGACAGTTCCCTGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085548.4 ENSMUST00000174798.3 ENSMUST00000208832.2 ENSMUST00000213274.2 |
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| CDS-3UTR CAA 90 bp | GGTGGATTGAACAGTCCAATATCTGAAGAGGTAAAATGTCTGGTGATCAGTCATCACTTAGCCACACAGTaGCCACAGCCCAAGTGCACT | + |
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Preference number: 5 (lower is better) Translates to: GGLNSPISEEVKCLVISHHLATQ*PQPKCT Trigger: AGTGCACTTGGGCTGTGGCAACTGTGTGGCTAAGTG...ATGACTGATCACCAGACATTTTACCTCTTCAGATATTGGACTGTTCAATCCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213274.2 |
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| CDS-3UTR CAA 90 bp | GGTGGATTGAACAGTCCAATATCTGAAGAGGTAAAATGTCTGGTGATCAGTCATTTAGAGCAGGAGAGCTaGAGCAACTGGGGGACATCA | + |
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Preference number: 5 (lower is better) Translates to: GGLNSPISEEVKCLVISHLEQES*SNWGTS Trigger: TGATGTCCCCCAGTTGCTCAAGCTCTCCTGCTCTAA...ATGACTGATCACCAGACATTTTACCTCTTCAGATATTGGACTGTTCAATCCACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213274.2 |
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| CDS GCA 90 bp | GTGGACATAGGAGATGACAATCCCAGTGAAACAGGCAAAGGAAACTaGAGTCAGGAAACTAACCATGTCCATTATTACAAGGTGGTCATT | + |
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Preference number: 5 (lower is better) Translates to: VDIGDDNPSETGKGN*SQETNHVHYYKVVI Trigger: AATGACCACCTTGTAATAATGGACATGGTTAGTTTCCTGACTGCAGTTTCCTTTGCCTGTTTCACTGGGATTGTCATCTCCTATGTCCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085548.4 ENSMUST00000174798.3 ENSMUST00000208832.2 ENSMUST00000213274.2 |
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| CDS-3UTR CAA 90 bp | AATCTCCACAGATCTGAGTGCTGTTTATCAATATATTTCATGCATCTGGTAGGAAGAACTCTAAAGCAGTaGAAGAGTCTGAGGTTAGGT | + |
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Preference number: 5 (lower is better) Translates to: NLHRSECCLSIYFMHLVGRTLKQ*KSLRLG Trigger: ACCTAACCTCAGACTCTTCAACTGCTTTAGAGTTCT...TCCTACCAGATGCATGAAATATATTGATAAACAGCACTCAGATCTGTGGAGATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213274.2 |
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| CDS-3UTR CAA 90 bp | AATCTCCACAGATCTGAGTGCTGTTTATCAATATATTTCATGCATCTGGTAGGAGGAGGAATCCTCTCATaGTGGTTATATTTTCCACTA | + |
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Preference number: 5 (lower is better) Translates to: NLHRSECCLSIYFMHLVGGGILS*WLYFPL Trigger: TAGTGGAAAATATAACCACAATGAGAGGATTCCTCC...TCCTACCAGATGCATGAAATATATTGATAAACAGCACTCAGATCTGTGGAGATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213274.2 |
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| CDS GCA 72 bp | AGGTATGTCACCAAGAAGAGCACAGCCTGTACGATCTaGAGCTCATGGTTGTCAGAGAATCCCATGAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: RYVTKKSTACTI*SSWLSENPMRR Trigger: CCTCCTCATGGGATTCTCTGACAACCATGAGCTGCAGATCGTACAGGCTGTGCTCTTCTTGGTGACATACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085548.4 ENSMUST00000174798.3 ENSMUST00000208832.2 ENSMUST00000213274.2 |
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| CDS CCA 72 bp | ACCAAGAAGAGCACAGCCTGTACGATCTGCAGCTCATaGTTGTCAGAGAATCCCATGAGGAGGAATCCTCTC | + |
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Preference number: 6 (lower is better) Translates to: TKKSTACTICSS*LSENPMRRNPL Trigger: GAGAGGATTCCTCCTCATGGGATTCTCTGACAACCATGAGCTGCAGATCGTACAGGCTGTGCTCTTCTTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085548.4 ENSMUST00000174798.3 ENSMUST00000208832.2 ENSMUST00000213274.2 |
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| CDS TCA 72 bp | TTTGTGCCAGGGAACTGTCAACATACTGGGGAACTGTaGCAGAGAGGGATGAGAGGTCCAGAATGGAAAGGT | + |
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Preference number: 6 (lower is better) Translates to: FVPGNCQHTGEL*QRGMRGPEWKG Trigger: ACCTTTCCATTCTGGACCTCTCATCCCTCTCTGTCACAGTTCCCCAGTATGTTGACAGTTCCCTGGCACAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085548.4 ENSMUST00000174798.3 ENSMUST00000208832.2 ENSMUST00000213274.2 |
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| CDS CCA 72 bp | GCAGTCAGGAAACTAACCATGTCCATTATTACAAGGTaGTCATTAGAGCAGGAGAGCTTGAGCAACTGGGGG | + |
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Preference number: 6 (lower is better) Translates to: AVRKLTMSIITR*SLEQESLSNWG Trigger: CCCCCAGTTGCTCAAGCTCTCCTGCTCTAATGACCACCTTGTAATAATGGACATGGTTAGTTTCCTGACTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000085548.4 ENSMUST00000174798.3 ENSMUST00000208832.2 ENSMUST00000213274.2 |
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| CDS TCA 72 bp | GTACGATCTGCAGCTCATGGTTGTCAGAGAATCCCATaGGGAGGAATCCTCTCATTGTGGTTATATTTTCCA | + |
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Preference number: 6 (lower is better) Translates to: VRSAAHGCQRIP*GGILSLWLYFP Trigger: TGGAAAATATAACCACAATGAGAGGATTCCTCCTCATGGGATTCTCTGACAACCATGAGCTGCAGATCGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000085548.4 ENSMUST00000174798.3 ENSMUST00000208832.2 ENSMUST00000213274.2 |
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