Pregenerated sensors for OLFR1118 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000083706Ensembl transcript IDs: ENSMUST00000121296.4, ENSMUST00000216396.3
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCCCTCCACCTGCTCACAAACCCACCCACTCCCACTTTCTTGTCTTaGGATTCTCATACTCTGGGGTACCGAGCCTTCTCAGGACCAAGG | + |
|
Preference number: 1 (lower is better) Translates to: PLHLLTNPPTPTFLS*DSHTLGYRAFSGPR Trigger: CCTTGGTCCTGAGAAGGCTCGGTACCCCAGAGTATGAGAATCCCAAGACAAGAAAGTGGGAGTGGGTGGGTTTGTGAGCAGGTGGAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216396.3 |
||
| 3UTR TCA 90 bp | TCTGGGGTACCGAGCCTTCTCAGGACCAAGGACTTCTCCTCACATTaGTGTCCAACAAGGCCATACTCTGCTACATATGCAGCCGGAGCC | + |
|
Preference number: 1 (lower is better) Translates to: SGVPSLLRTKDFSSH*CPTRPYSATYAAGA Trigger: GGCTCCGGCTGCATATGTAGCAGAGTATGGCCTTGTTGGACATCAATGTGAGGAGAAGTCCTTGGTCCTGAGAAGGCTCGGTACCCCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216396.3 |
||
| 3UTR CCA 90 bp | CAAACCCACCCACTCCCACTTTCTTGTCTTGGGATTCTCATACTCTaGGGTACCGAGCCTTCTCAGGACCAAGGACTTCTCCTCACATTG | + |
|
Preference number: 1 (lower is better) Translates to: QTHPLPLSCLGILIL*GTEPSQDQGLLLTL Trigger: CAATGTGAGGAGAAGTCCTTGGTCCTGAGAAGGCTCGGTACCCCAGAGTATGAGAATCCCAAGACAAGAAAGTGGGAGTGGGTGGGTTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216396.3 |
||
| 3UTR GCA 90 bp | CTTCTCCTCACATTGATGTCCAACAAGGCCATACTCTGCTACATATaGAGCCGGAGCCATGGGTCCCTTCAAGTGTACTCTGTTTTGTGG | + |
|
Preference number: 1 (lower is better) Translates to: LLLTLMSNKAILCYI*SRSHGSLQVYSVLW Trigger: CCACAAAACAGAGTACACTTGAAGGGACCCATGGCTCCGGCTGCATATGTAGCAGAGTATGGCCTTGTTGGACATCAATGTGAGGAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216396.3 |
||
| 3UTR CAA 90 bp | TCCCCTCCACCTGCTCACAAACCCACCCACTCCCACTTTCTTGTCTaGGGATTCTCATACTCTGGGGTACCGAGCCTTCTCAGGACCAAG | + |
|
Preference number: 2 (lower is better) Translates to: SPPPAHKPTHSHFLV*GFSYSGVPSLLRTK Trigger: CTTGGTCCTGAGAAGGCTCGGTACCCCAGAGTATGAGAATCCCAAGACAAGAAAGTGGGAGTGGGTGGGTTTGTGAGCAGGTGGAGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216396.3 |
||
| 3UTR CAA 90 bp | CTCTGGGGTACCGAGCCTTCTCAGGACCAAGGACTTCTCCTCACATaGATGTCCAACAAGGCCATACTCTGCTACATATGCAGCCGGAGC | + |
|
Preference number: 2 (lower is better) Translates to: LWGTEPSQDQGLLLT*MSNKAILCYICSRS Trigger: GCTCCGGCTGCATATGTAGCAGAGTATGGCCTTGTTGGACATCAATGTGAGGAGAAGTCCTTGGTCCTGAGAAGGCTCGGTACCCCAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216396.3 |
||
| 3UTR-3UTR CCA 90 bp | TACCGAGCCTTCTCAGGACCAAGGACTTCTCCTCACATTGATGTCCAACAAGGCATATATGCCCAGGAGTaGTATTGCTTGTTACTCCTG | + |
|
Preference number: 2 (lower is better) Translates to: YRAFSGPRTSPHIDVQQGIYAQE*YCLLLL Trigger: CAGGAGTAACAAGCAATACCACTCCTGGGCATATAT...GCCTTGTTGGACATCAATGTGAGGAGAAGTCCTTGGTCCTGAGAAGGCTCGGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216396.3 |
||
| 3UTR-3UTR CCA 90 bp | TACCGAGCCTTCTCAGGACCAAGGACTTCTCCTCACATTGATGTCCAACAAGGCGCCCTTATTCCACGTTaGAGCATCTTCTGGATATAT | + |
|
Preference number: 2 (lower is better) Translates to: YRAFSGPRTSPHIDVQQGALIPR*SIFWIY Trigger: ATATATCCAGAAGATGCTCCAACGTGGAATAAGGGC...GCCTTGTTGGACATCAATGTGAGGAGAAGTCCTTGGTCCTGAGAAGGCTCGGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216396.3 |
||
| 3UTR-3UTR TCA 90 bp | TACCGAGCCTTCTCAGGACCAAGGACTTCTCCTCACATTGATGTCCAACAAGGCTTACCTCAGTCAGGATaGTATTTTCTAGTTCCATCT | + |
|
Preference number: 2 (lower is better) Translates to: YRAFSGPRTSPHIDVQQGLPQSG*YFLVPS Trigger: AGATGGAACTAGAAAATATCATCCTGACTGAGGTAA...GCCTTGTTGGACATCAATGTGAGGAGAAGTCCTTGGTCCTGAGAAGGCTCGGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216396.3 |
||
| 3UTR-3UTR GCA 90 bp | CACATTTTCTGTATCCATTCCTCAGTTGAGGGACATATGGGTTCTTTCGAGCTTGGAGACTCTGCATTCTaGCTTACCCTCTGTAAGTTC | + |
|
Preference number: 2 (lower is better) Translates to: HIFCIHSSVEGHMGSFELGDSAF*LTLCKF Trigger: GAACTTACAGAGGGTAAGGCAGAATGCAGAGTCTCC...AAGCTCGAAAGAACCCATATGTCCCTCAACTGAGGAATGGATACAGAAAATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216396.3 |
||
| 3UTR-3UTR CCA 90 bp | CGTTGGAGCATCTTCTGGATATATGCCCAGGAGTGGTATTGCTTGTTACTCCTGTGTCTCATAAGCCTATaGACTATAGGAATACAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: RWSIFWIYAQEWYCLLLLCLISL*TIGIQR Trigger: TCTCTGTATTCCTATAGTCCATAGGCTTATGAGACA...CAGGAGTAACAAGCAATACCACTCCTGGGCATATATCCAGAAGATGCTCCAACG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216396.3 |
||
| 3UTR-3UTR TCA 90 bp | CACATTTTCTGTATCCATTCCTCAGTTGAGGGACATATGGGTTCTTTCGAGCTTAGGAATACAGAGATTTaGAGAACAAGAGATCAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: HIFCIHSSVEGHMGSFELRNTEI*RTRDQR Trigger: CCTCTGATCTCTTGTTCTTCAAATCTCTGTATTCCT...AAGCTCGAAAGAACCCATATGTCCCTCAACTGAGGAATGGATACAGAAAATGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216396.3 |
||
| 3UTR-3UTR GCA 90 bp | CACATTTTCTGTATCCATTCCTCAGTTGAGGGACATATGGGTTCTTTCGAGCTTCTTAGTAGGAATGTTTaGGTTCAGTATATGTTTGAC | + |
|
Preference number: 2 (lower is better) Translates to: HIFCIHSSVEGHMGSFELLSRNV*VQYMFD Trigger: GTCAAACATATACTGAACGCAAACATTCCTACTAAG...AAGCTCGAAAGAACCCATATGTCCCTCAACTGAGGAATGGATACAGAAAATGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216396.3 |
||
| 3UTR CCA 72 bp | CCACTCCCACTTTCTTGTCTTGGGATTCTCATACTCTaGGGTACCGAGCCTTCTCAGGACCAAGGACTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: PLPLSCLGILIL*GTEPSQDQGLL Trigger: GAGAAGTCCTTGGTCCTGAGAAGGCTCGGTACCCCAGAGTATGAGAATCCCAAGACAAGAAAGTGGGAGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216396.3 |
||
| 3UTR CCA 72 bp | CTGCTCACAAACCCACCCACTCCCACTTTCTTGTCTTaGGATTCTCATACTCTGGGGTACCGAGCCTTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: LLTNPPTPTFLS*DSHTLGYRAFS Trigger: TGAGAAGGCTCGGTACCCCAGAGTATGAGAATCCCAAGACAAGAAAGTGGGAGTGGGTGGGTTTGTGAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216396.3 |
||
| 3UTR GCA 72 bp | CTTCTCCTCACATTGATGTCCAACAAGGCCATACTCTaGTACATATGCAGCCGGAGCCATGGGTCCCTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: LLLTLMSNKAIL*YICSRSHGSLQ Trigger: TTGAAGGGACCCATGGCTCCGGCTGCATATGTAGCAGAGTATGGCCTTGTTGGACATCAATGTGAGGAGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216396.3 |
||
| 3UTR CCA 72 bp | CGGAGCCATGGGTCCCTTCAAGTGTACTCTGTTTTGTaGTTTAGTCATTGGGAGCTCTGTGGGTACTGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: RSHGSLQVYSVL*FSHWELCGYWL Trigger: CAACCAGTACCCACAGAGCTCCCAATGACTAAACCACAAAACAGAGTACACTTGAAGGGACCCATGGCTCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216396.3 |
||
| 3UTR TCA 72 bp | CCGAGCCTTCTCAGGACCAAGGACTTCTCCTCACATTaGTGTCCAACAAGGCCATACTCTGCTACATATGCA | + |
|
Preference number: 3 (lower is better) Translates to: PSLLRTKDFSSH*CPTRPYSATYA Trigger: TGCATATGTAGCAGAGTATGGCCTTGTTGGACATCAATGTGAGGAGAAGTCCTTGGTCCTGAGAAGGCTCGG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216396.3 |
||
| 3UTR GCA 72 bp | ACATTGATGTCCAACAAGGCCATACTCTGCTACATATaGAGCCGGAGCCATGGGTCCCTTCAAGTGTACTCT | + |
|
Preference number: 3 (lower is better) Translates to: TLMSNKAILCYI*SRSHGSLQVYS Trigger: AGAGTACACTTGAAGGGACCCATGGCTCCGGCTGCATATGTAGCAGAGTATGGCCTTGTTGGACATCAATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216396.3 |
||
| 3UTR CCA 72 bp | ACTCTGCATTCTGCCTTACCCTCTGTAAGTTCACGCTaGCTCTCACTGTTTCAATCTCCACTTCCACAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: TLHSALPSVSSR*LSLFQSPLPQD Trigger: ATCCTGTGGAAGTGGAGATTGAAACAGTGAGAGCCAGCGTGAACTTACAGAGGGTAAGGCAGAATGCAGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216396.3 |
||
| 3UTR CCA 72 bp | TTGTATATGGGATGGATCCACCGGTGGGGCAGTCTCTaGACAGTTTTTCCTTCAGTCTCTGCTCTACACTAT | + |
|
Preference number: 3 (lower is better) Translates to: LYMGWIHRWGSL*TVFPSVSALHY Trigger: ATAGTGTAGAGCAGAGACTGAAGGAAAAACTGTCCAGAGACTGCCCCACCGGTGGATCCATCCCATATACAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216396.3 |
||
| 3UTR CCA 72 bp | TATGAACATAATGGAGCATGTGCCCTTATTCCACGTTaGAGCATCTTCTGGATATATGCCCAGGAGTGGTAT | + |
|
Preference number: 3 (lower is better) Translates to: YEHNGACALIPR*SIFWIYAQEWY Trigger: ATACCACTCCTGGGCATATATCCAGAAGATGCTCCAACGTGGAATAAGGGCACATGCTCCATTATGTTCATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216396.3 |
||
| 3UTR TCA 72 bp | GTAAATGTACCACATTTTCTGTATCCATTCCTCAGTTaGGGGACATATGGGTTCTTTCGAGCTTCTGGCTAC | + |
|
Preference number: 3 (lower is better) Translates to: VNVPHFLYPFLS*GTYGFFRASGY Trigger: GTAGCCAGAAGCTCGAAAGAACCCATATGTCCCTCAACTGAGGAATGGATACAGAAAATGTGGTACATTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216396.3 |
||
| 3UTR-3UTR CAA 90 bp | GGTTCTTTCGAGCTTCTGGCTACTATAAATAAGGCTGCTATGAACATAATGGAGTTTGCAGCACCAAGCTaGAATTTCAAATTGTATGCA | + |
|
Preference number: 3 (lower is better) Translates to: GSFELLATINKAAMNIMEFAAPS*NFKLYA Trigger: TGCATACAATTTGAAATTCAAGCTTGGTGCTGCAAA...CTCCATTATGTTCATAGCAGCCTTATTTATAGTAGCCAGAAGCTCGAAAGAACC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216396.3 |
||
| 3UTR CAA 72 bp | ACCGAGCCTTCTCAGGACCAAGGACTTCTCCTCACATaGATGTCCAACAAGGCCATACTCTGCTACATATGC | + |
|
Preference number: 4 (lower is better) Translates to: TEPSQDQGLLLT*MSNKAILCYIC Trigger: GCATATGTAGCAGAGTATGGCCTTGTTGGACATCAATGTGAGGAGAAGTCCTTGGTCCTGAGAAGGCTCGGT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216396.3 |
||
| 3UTR CAA 72 bp | CAGGGACAGCTGTATCAGGCTCCTGTCATCAAGCACTaGTTGGCATCCACGATAGTGTATGAGTTTGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: QGQLYQAPVIKH*LASTIVYEFGD Trigger: ATCACCAAACTCATACACTATCGTGGATGCCAACAAGTGCTTGATGACAGGAGCCTGATACAGCTGTCCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216396.3 |
||
| CDS-3UTR TCA 90 bp | ACCCTCTGTAAGTTCACGCTGGCTCTCACTGTTTCAATCTCCACTTCCACAGGAGGCCATCCCTTTGGCTaGAGACAGTTTCATAATGTT | + |
|
Preference number: 4 (lower is better) Translates to: TLCKFTLALTVSISTSTGGHPFG*RQFHNV Trigger: AACATTATGAAACTGTCTTCAGCCAAAGGGATGGCC...TCCTGTGGAAGTGGAGATTGAAACAGTGAGAGCCAGCGTGAACTTACAGAGGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216396.3 |
||
| 3UTR CAA 72 bp | TTGTGGTTTAGTCATTGGGAGCTCTGTGGGTACTGGTaGGTTCCTCGTGTTGTTCCTCTTATGGCATTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LWFSHWELCGYW*VPRVVPLMALQ Trigger: TTGCAATGCCATAAGAGGAACAACACGAGGAACCAACCAGTACCCACAGAGCTCCCAATGACTAAACCACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216396.3 |
||
| 3UTR CAA 72 bp | TACTGGTTGGTTCCTCGTGTTGTTCCTCTTATGGCATaGCAAGCTCCTTCAGCTCTTTCAGTCCTTTCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: YWLVPRVVPLMA*QAPSALSVLSL Trigger: TAGAGAAAGGACTGAAAGAGCTGAAGGAGCTTGCAATGCCATAAGAGGAACAACACGAGGAACCAACCAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216396.3 |
||
| CDS-3UTR CCA 90 bp | GGTTCTTTCGAGCTTCTGGCTACTATAAATAAGGCTGCTATGAACATAATGGAGAGGTGGAAAAAGCCTTaGCCATCCCTTTGGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GSFELLATINKAAMNIMERWKKP*PSLWLK Trigger: CTTCAGCCAAAGGGATGGCCAAGGCTTTTTCCACCT...CTCCATTATGTTCATAGCAGCCTTATTTATAGTAGCCAGAAGCTCGAAAGAACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216396.3 |
||
| CDS-3UTR CCA 90 bp | CGTTGGAGCATCTTCTGGATATATGCCCAGGAGTGGTATTGCTTGTTACTCCTGAAGCTGGGATCAAAATaGTGTAGAAAAGAGATAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RWSIFWIYAQEWYCLLLLKLGSK*CRKEIA Trigger: TGCTATCTCTTTTCTACACCATTTTGATCCCAGCTT...CAGGAGTAACAAGCAATACCACTCCTGGGCATATATCCAGAAGATGCTCCAACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216396.3 |
||
| 3UTR CAA 72 bp | TTGGAGCATCTTCTGGATATATGCCCAGGAGTGGTATaGCTTGTTACTCCTGCCATAGGATTACTACTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: LEHLLDICPGVV*LVTPAIGLLLY Trigger: ATACAGTAGTAATCCTATGGCAGGAGTAACAAGCAATACCACTCCTGGGCATATATCCAGAAGATGCTCCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216396.3 |
||
| CDS-3UTR TCA 90 bp | CACATTTTCTGTATCCATTCCTCAGTTGAGGGACATATGGGTTCTTTCGAGCTTTTCTCAGTGCCATCATaGTATCTTTGTTCCTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: HIFCIHSSVEGHMGSFELFSVPS*YLCSSE Trigger: CTCTGAGGAACAAAGATATCATGATGGCACTGAGAA...AAGCTCGAAAGAACCCATATGTCCCTCAACTGAGGAATGGATACAGAAAATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216396.3 |
||
| 3UTR CAA 72 bp | TGTAAATGTACCACATTTTCTGTATCCATTCCTCAGTaGAGGGACATATGGGTTCTTTCGAGCTTCTGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: CKCTTFSVSIPQ*RDIWVLSSFWL Trigger: TAGCCAGAAGCTCGAAAGAACCCATATGTCCCTCAACTGAGGAATGGATACAGAAAATGTGGTACATTTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216396.3 |
||
| CDS-3UTR CCA 90 bp | GGTTCTTTCGAGCTTCTGGCTACTATAAATAAGGCTGCTATGAACATAATGGAGAAATACATAGGAGTATaGAGAGCAGGGTCAGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GSFELLATINKAAMNIMEKYIGV*RAGSVF Trigger: AAAAACTGACCCTGCTCTCCATACTCCTATGTATTT...CTCCATTATGTTCATAGCAGCCTTATTTATAGTAGCCAGAAGCTCGAAAGAACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216396.3 |
||
| 3UTR CAA 72 bp | CATTGTGGTCCTATTCCTATATTATCATGTAGGGGATaGTGTGTGGTAGATATAGATGCTTGTATGTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: HCGPIPILSCRG*CVVDIDACMCV Trigger: CACACACATACAAGCATCTATATCTACCACACACAATCCCCTACATGATAATATAGGAATAGGACCACAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216396.3 |
||
| CDS-3UTR CCA 90 bp | GGTTCTTTCGAGCTTCTGGCTACTATAAATAAGGCTGCTATGAACATAATGGAGAATAGGATTCAAAGCTaGGATCAAAATGGTGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GSFELLATINKAAMNIMENRIQS*DQNGVE Trigger: TTCTACACCATTTTGATCCCAGCTTTGAATCCTATT...CTCCATTATGTTCATAGCAGCCTTATTTATAGTAGCCAGAAGCTCGAAAGAACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216396.3 |
||
| CDS-3UTR CAA 90 bp | GGTTCTTTCGAGCTTCTGGCTACTATAAATAAGGCTGCTATGAACATAATGGAGGCCTTGGCCATCCCTTaGGCTGAAGACAGTTTCATA | + |
|
Preference number: 5 (lower is better) Translates to: GSFELLATINKAAMNIMEALAIP*AEDSFI Trigger: TATGAAACTGTCTTCAGCCAAAGGGATGGCCAAGGC...CTCCATTATGTTCATAGCAGCCTTATTTATAGTAGCCAGAAGCTCGAAAGAACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216396.3 |
||
| CDS TCA 72 bp | TCTGGTAGGTCTGCCCAATTTGTACAGGAATCCCACTaGTCCAAGAGGCAGCTACCAGCTGTAAACACACTT | + |
|
Preference number: 6 (lower is better) Translates to: SGRSAQFVQESH*SKRQLPAVNTL Trigger: AAGTGTGTTTACAGCTGGTAGCTGCCTCTTGGATCAGTGGGATTCCTGTACAAATTGGGCAGACCTACCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121296.4 ENSMUST00000216396.3 |
||
| CDS GCA 72 bp | TGGAACCATAACAAACACCACTGCAACAACATACACTaGAACTGTATTCATAAAGATGTCACCACAAGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: WNHNKHHCNNIH*NCIHKDVTTSK Trigger: CTTGCTTGTGGTGACATCTTTATGAATACAGTTGCAGTGTATGTTGTTGCAGTGGTGTTTGTTATGGTTCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121296.4 ENSMUST00000216396.3 |
||