Pregenerated sensors for OLFR1116 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070855Ensembl transcript IDs: ENSMUST00000090717.5, ENSMUST00000216364.4
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTTTGTACACCAGGCTGGCCTCAAACTCAGAAATCCACCTGCCTCTaGCTCCCGTGTGTTGGGATTAAAGGAAGGCATGTGCCAGCATGC | + |
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Preference number: 1 (lower is better) Translates to: LCTPGWPQTQKSTCL*LPCVGIKGRHVPAC Trigger: GCATGCTGGCACATGCCTTCCTTTAATCCCAACACACGGGAGGCAGAGGCAGGTGGATTTCTGAGTTTGAGGCCAGCCTGGTGTACAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
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| 3UTR GCA 90 bp | AACCATCGAACAAAGTGTACACATGCATGGACCAATGGCTCCAGCTaGATATGTAGCAGAGGGTGGCCTTGTTGGACAACAATGAGAGGA | + |
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Preference number: 1 (lower is better) Translates to: NHRTKCTHAWTNGSS*ICSRGWPCWTTMRG Trigger: TCCTCTCATTGTTGTCCAACAAGGCCACCCTCTGCTACATATGCAGCTGGAGCCATTGGTCCATGCATGTGTACACTTTGTTCGATGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
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| 3UTR CCA 90 bp | TGCTGGAGAGAATGTGGAGAAAAAGGAACACTCCTCCATTGTTGGTaGGATTGCAAGCTTGTACAACCACTCTGGATATCAATCTGGTGG | + |
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Preference number: 1 (lower is better) Translates to: CWRECGEKGTLLHCW*DCKLVQPLWISIWW Trigger: CCACCAGATTGATATCCAGAGTGGTTGTACAAGCTTGCAATCCCACCAACAATGGAGGAGTGTTCCTTTTTCTCCACATTCTCTCCAGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
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| 3UTR GCA 90 bp | AGAGAATGTGGAGAAAAAGGAACACTCCTCCATTGTTGGTGGGATTaGAAGCTTGTACAACCACTCTGGATATCAATCTGGTGGTTCCTC | + |
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Preference number: 1 (lower is better) Translates to: RECGEKGTLLHCWWD*KLVQPLWISIWWFL Trigger: GAGGAACCACCAGATTGATATCCAGAGTGGTTGTACAAGCTTGCAATCCCACCAACAATGGAGGAGTGTTCCTTTTTCTCCACATTCTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
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| 3UTR CCA 90 bp | AGATGCTGGAGAGAATGTGGAGAAAAAGGAACACTCCTCCATTGTTaGTGGGATTGCAAGCTTGTACAACCACTCTGGATATCAATCTGG | + |
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Preference number: 1 (lower is better) Translates to: RCWRECGEKGTLLHC*WDCKLVQPLWISIW Trigger: CCAGATTGATATCCAGAGTGGTTGTACAAGCTTGCAATCCCACCAACAATGGAGGAGTGTTCCTTTTTCTCCACATTCTCTCCAGCATCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
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| 3UTR CCA 90 bp | CAGGAGGCAAGCATAAGAACAGAAGCAACAGAAACCAAGGTTACTTaGCATCATCAGAACCAAATTCTCCTAGGACATGCCATCACGCAA | + |
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Preference number: 1 (lower is better) Translates to: QEASIRTEATETKVT*HHQNQILLGHAITQ Trigger: TTGCGTGATGGCATGTCCTAGGAGAATTTGGTTCTGATGATGCCAAGTAACCTTGGTTTCTGTTGCTTCTGTTCTTATGCTTGCCTCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
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| 3UTR CCA 90 bp | CTAATTGATCCATTCCTATCTCCTTGTACTGAGGTCAAATGTAAGTaGATAAAGGAACTCCACATAAATACAGAGACAGTGAAAGCTCTA | + |
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Preference number: 1 (lower is better) Translates to: LIDPFLSPCTEVKCK*IKELHINTETVKAL Trigger: TAGAGCTTTCACTGTCTCTGTATTTATGTGGAGTTCCTTTATCCACTTACATTTGACCTCAGTACAAGGAGATAGGAATGGATCAATTAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
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| 3UTR TCA 90 bp | GTGGTACATTTACACAATGGAGTACTAGTCAGCTATTACAAAGAATaGATTTATGAAATTTCTAGGCAAATGGATGGACCTGGAGGCTAT | + |
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Preference number: 1 (lower is better) Translates to: VVHLHNGVLVSYYKE*IYEISRQMDGPGGY Trigger: ATAGCCTCCAGGTCCATCCATTTGCCTAGAAATTTCATAAATTCATTCTTTGTAATAGCTGACTAGTACTCCATTGTGTAAATGTACCAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
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| 3UTR CAA 90 bp | GCTGGCCTCAAACTCAGAAATCCACCTGCCTCTGCCTCCCGTGTGTaGGGATTAAAGGAAGGCATGTGCCAGCATGCCCGGCTTCTATCC | + |
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Preference number: 2 (lower is better) Translates to: AGLKLRNPPASASRV*GLKEGMCQHARLLS Trigger: GGATAGAAGCCGGGCATGCTGGCACATGCCTTCCTTTAATCCCAACACACGGGAGGCAGAGGCAGGTGGATTTCTGAGTTTGAGGCCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
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| 3UTR-3UTR GCA 90 bp | TGCCTCCCGTGTGTTGGGATTAAAGGAAGGCATGTGCCAGCATGCCCGGCTTCTTCAGCTGTTAGCAGATaGTGGAGAGAATGTGGAGAA | + |
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Preference number: 2 (lower is better) Translates to: CLPCVGIKGRHVPACPASSAVSR*WRECGE Trigger: TTCTCCACATTCTCTCCAGCATCTGCTAACAGCTGA...AGAAGCCGGGCATGCTGGCACATGCCTTCCTTTAATCCCAACACACGGGAGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
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| 3UTR-3UTR TCA 90 bp | GAGCAGCAGCGAAGAACCAGGGAGTCACCAGAAAGGGTGAATTTATTCATCACTAAGGACCAAAGGAGCTaGAGGAACTTGCAACCCCAC | + |
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Preference number: 2 (lower is better) Translates to: EQQRRTRESPERVNLFITKDQRS*RNLQPH Trigger: GTGGGGTTGCAAGTTCCTTCAGCTCCTTTGGTCCTT...AGTGATGAATAAATTCACCCTTTCTGGTGACTCCCTGGTTCTTCGCTGCTGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
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| 3UTR-3UTR CCA 90 bp | TGCCTCCCGTGTGTTGGGATTAAAGGAAGGCATGTGCCAGCATGCCCGGCTTCTTGGCAAACACAGAAGTaGATGATCACAGTCAACTAT | + |
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Preference number: 2 (lower is better) Translates to: CLPCVGIKGRHVPACPASWQTQK*MITVNY Trigger: ATAGTTGACTGTGATCATCCACTTCTGTGTTTGCCA...AGAAGCCGGGCATGCTGGCACATGCCTTCCTTTAATCCCAACACACGGGAGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
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| 3UTR-3UTR TCA 90 bp | GAGCAGCAGCGAAGAACCAGGGAGTCACCAGAAAGGGTGAATTTATTCATCACTTGGGATCACCATGCCTaGCCTAAAGCTGTACTACAG | + |
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Preference number: 2 (lower is better) Translates to: EQQRRTRESPERVNLFITWDHHA*PKAVLQ Trigger: CTGTAGTACAGCTTTAGGTCAGGCATGGTGATCCCA...AGTGATGAATAAATTCACCCTTTCTGGTGACTCCCTGGTTCTTCGCTGCTGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
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| 3UTR-3UTR CCA 90 bp | ACCATAGATGCGAGGATCAGGAAGAGAATACAAGAGATGGAGGGGAGAATCTCTAGAGACTGCCTCAGCTaGGGATCCACCCCATATACA | + |
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Preference number: 2 (lower is better) Translates to: TIDARIRKRIQEMEGRISRDCLS*GSTPYT Trigger: TGTATATGGGGTGGATCCCCAGCTGAGGCAGTCTCT...AGAGATTCTCCCCTCCATCTCTTGTATTCTCTTCCTGATCCTCGCATCTATGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
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| 3UTR-3UTR CCA 90 bp | TGCCTCCCGTGTGTTGGGATTAAAGGAAGGCATGTGCCAGCATGCCCGGCTTCTACACTCACTGAAAAGTaGATATTAGGTCAAAAGCTC | + |
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Preference number: 2 (lower is better) Translates to: CLPCVGIKGRHVPACPASTLTEK*ILGQKL Trigger: GAGCTTTTGACCTAATATCCACTTTTCAGTGAGTGT...AGAAGCCGGGCATGCTGGCACATGCCTTCCTTTAATCCCAACACACGGGAGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
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| 3UTR CAA 90 bp | GCAGGAGGCAAGCATAAGAACAGAAGCAACAGAAACCAAGGTTACTaGGCATCATCAGAACCAAATTCTCCTAGGACATGCCATCACGCA | + |
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Preference number: 2 (lower is better) Translates to: AGGKHKNRSNRNQGY*ASSEPNSPRTCHHA Trigger: TGCGTGATGGCATGTCCTAGGAGAATTTGGTTCTGATGATGCCAAGTAACCTTGGTTTCTGTTGCTTCTGTTCTTATGCTTGCCTCCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
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| 3UTR CAA 90 bp | CAGATGCTGGAGAGAATGTGGAGAAAAAGGAACACTCCTCCATTGTaGGTGGGATTGCAAGCTTGTACAACCACTCTGGATATCAATCTG | + |
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Preference number: 2 (lower is better) Translates to: QMLERMWRKRNTPPL*VGLQACTTTLDINL Trigger: CAGATTGATATCCAGAGTGGTTGTACAAGCTTGCAATCCCACCAACAATGGAGGAGTGTTCCTTTTTCTCCACATTCTCTCCAGCATCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
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| 3UTR-3UTR TCA 90 bp | AAAAAGGTCAAGGAACATATAAAGGCAGGCCTGTTAGAATTACTCCAGACTTCTACATGCACAGGCTTTTaGGCCAGAGCAGCAGCGAAG | + |
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Preference number: 2 (lower is better) Translates to: KKVKEHIKAGLLELLQTSTCTGF*ARAAAK Trigger: CTTCGCTGCTGCTCTGGCTCAAAAGCCTGTGCATGT...AGAAGTCTGGAGTAATTCTAACAGGCCTGCCTTTATATGTTCCTTGACCTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
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| 3UTR-3UTR GCA 90 bp | ACCATAGATGCGAGGATCAGGAAGAGAATACAAGAGATGGAGGGGAGAATCTCTCCTTGTGTCTCTAGCTaGATATGTATCAGAAGATGG | + |
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Preference number: 2 (lower is better) Translates to: TIDARIRKRIQEMEGRISPCVSS*ICIRRW Trigger: CCATCTTCTGATACATATGCAGCTAGAGACACAAGG...AGAGATTCTCCCCTCCATCTCTTGTATTCTCTTCCTGATCCTCGCATCTATGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
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| 3UTR-3UTR GCA 90 bp | ACCTCACATAATAATAGTGGGAGACTTCAACACCCAACTCTCACCAATGGACAGACCAGATGGGTTCAGTaGAGAGTTCTATCAGACCTT | + |
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Preference number: 2 (lower is better) Translates to: TSHNNSGRLQHPTLTNGQTRWVQ*RVLSDL Trigger: AAGGTCTGATAGAACTCTGCACTGAACCCATCTGGT...CTGTCCATTGGTGAGAGTTGGGTGTTGAAGTCTCCCACTATTATTATGTGAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
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| 3UTR-3UTR CCA 90 bp | GACAAAGAGGGGCACTTCATACTCATCAAATGTAATATCTTCCAAGATGGACTCTCGGGTGATAGGGTATaGGGGACCTTTGTGATAGCA | + |
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Preference number: 2 (lower is better) Translates to: DKEGHFILIKCNIFQDGLSGDRV*GTFVIA Trigger: TGCTATCACAAAGGTCCCCCATACCCTATCACCCGA...GAGTCCATCTTGGAAGATATTACATTTGATGAGTATGAAGTGCCCCTCTTTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
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| 3UTR-3UTR TCA 90 bp | CCTAAACCACACCAATATCCAACAAAGAAAGAGAACTTCAGACCAATATTCCTCCTTGTTGGACAACAATaGGAGGATAGGCCCTTGGTC | + |
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Preference number: 2 (lower is better) Translates to: PKPHQYPTKKENFRPIFLLVGQQ*EDRPLV Trigger: GACCAAGGGCCTATCCTCTCATTGTTGTCCAACAAG...GAGGAATATTGGTCTGAAGTTCTCTTTCTTTGTTGGATATTGGTGTGGTTTAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
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| 3UTR-3UTR TCA 90 bp | TCCAAAAAGAAACTAGAGAGAGCATACAGTAGCAGTCTGACAGCACACTTAGAATCAACAAGTGCTTGCTaGCAGGAGCCTGATATAGCT | + |
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Preference number: 2 (lower is better) Translates to: SKKKLERAYSSSLTAHLESTSAC*QEPDIA Trigger: AGCTATATCAGGCTCCTGTCAGCAAGCACTTGTTGA...TTCTAAGTGTGCTGTCAGACTGCTACTGTATGCTCTCTCTAGTTTCTTTTTGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
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| 3UTR-3UTR TCA 90 bp | GAGCAGCAGCGAAGAACCAGGGAGTCACCAGAAAGGGTGAATTTATTCATCACTATGGACACTGATATTTaGCAAACAATCCAGAACTGT | + |
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Preference number: 2 (lower is better) Translates to: EQQRRTRESPERVNLFITMDTDI*QTIQNC Trigger: ACAGTTCTGGATTGTTTGTCAAATATCAGTGTCCAT...AGTGATGAATAAATTCACCCTTTCTGGTGACTCCCTGGTTCTTCGCTGCTGCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
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| 3UTR-3UTR GCA 90 bp | AGAATACAAGAGATGGAGGGGAGAATCTCTGATGTAGAAGATTCCATAGGGAACAACAAAGTGTACACATaGATGGACCAATGGCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: RIQEMEGRISDVEDSIGNNKVYT*MDQWLQ Trigger: CTGGAGCCATTGGTCCATGCATGTGTACACTTTGTT...GTTCCCTATGGAATCTTCTACATCAGAGATTCTCCCCTCCATCTCTTGTATTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
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| 3UTR-3UTR CCA 90 bp | TCCAAAAAGAAACTAGAGAGAGCATACAGTAGCAGTCTGACAGCACACTTAGAAGGCTATTCCGATGCATaGCAAACACAGAAGTGGATG | + |
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Preference number: 2 (lower is better) Translates to: SKKKLERAYSSSLTAHLEGYSDA*QTQKWM Trigger: CATCCACTTCTGTGTTTGCCATGCATCGGAATAGCC...TTCTAAGTGTGCTGTCAGACTGCTACTGTATGCTCTCTCTAGTTTCTTTTTGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
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| 3UTR-3UTR GCA 90 bp | GACAAAGAGGGGCACTTCATACTCATCAAATGTAATATCTTCCAAGATGGACTCCTTGCAAAGTTTTTATaGCTCAGTACAGGGGAACGC | + |
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Preference number: 2 (lower is better) Translates to: DKEGHFILIKCNIFQDGLLAKFL*LSTGER Trigger: GCGTTCCCCTGTACTGAGGCATAAAAACTTTGCAAG...GAGTCCATCTTGGAAGATATTACATTTGATGAGTATGAAGTGCCCCTCTTTGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
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| 3UTR-3UTR GCA 90 bp | TCTTTAGAGTTTAATGAAAATGAAGCCACAACATACCCAAACTTATGGGACACAAGGCATGTGCCAGCATaGCCGGCTTCTATCCTTATC | + |
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Preference number: 2 (lower is better) Translates to: SLEFNENEATTYPNLWDTRHVPA*PASILI Trigger: GATAAGGATAGAAGCCGGGCATGCTGGCACATGCCT...TGTGTCCCATAAGTTTGGGTATGTTGTGGCTTCATTTTCATTAAACTCTAAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
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| 3UTR-3UTR GCA 90 bp | ACCATAGATGCGAGGATCAGGAAGAGAATACAAGAGATGGAGGGGAGAATCTCTATATTAGAACAAAATTaGAGGATGAGTCTGAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: TIDARIRKRIQEMEGRISILEQN*RMSLRP Trigger: TGGCCTCAGACTCATCCTGCAATTTTGTTCTAATAT...AGAGATTCTCCCCTCCATCTCTTGTATTCTCTTCCTGATCCTCGCATCTATGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
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| 3UTR-3UTR CCA 90 bp | ACCATAGATGCGAGGATCAGGAAGAGAATACAAGAGATGGAGGGGAGAATCTCTTTAAGAGAGACCCCTTaGTCTTGCAAAGTTTTTATG | + |
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Preference number: 2 (lower is better) Translates to: TIDARIRKRIQEMEGRISLRETP*SCKVFM Trigger: CATAAAAACTTTGCAAGACCAAGGGGTCTCTCTTAA...AGAGATTCTCCCCTCCATCTCTTGTATTCTCTTCCTGATCCTCGCATCTATGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
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| 3UTR-3UTR CCA 90 bp | ACCTCACATAATAATAGTGGGAGACTTCAACACCCAACTCTCACCAATGGACAGTGGATATCAATCTGGTaGTTCCTCAGAAAATTGGAC | + |
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Preference number: 2 (lower is better) Translates to: TSHNNSGRLQHPTLTNGQWISIW*FLRKLD Trigger: GTCCAATTTTCTGAGGAACCACCAGATTGATATCCA...CTGTCCATTGGTGAGAGTTGGGTGTTGAAGTCTCCCACTATTATTATGTGAGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
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| 3UTR-3UTR CCA 90 bp | GAGCAGCAGCGAAGAACCAGGGAGTCACCAGAAAGGGTGAATTTATTCATCACTACAAAAGGACACATATaGTATACACTCACTGAAAAG | + |
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Preference number: 2 (lower is better) Translates to: EQQRRTRESPERVNLFITTKGHI*YTLTEK Trigger: CTTTTCAGTGAGTGTATACCATATGTGTCCTTTTGT...AGTGATGAATAAATTCACCCTTTCTGGTGACTCCCTGGTTCTTCGCTGCTGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
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| 3UTR-3UTR TCA 90 bp | AGAATACAAGAGATGGAGGGGAGAATCTCTGATGTAGAAGATTCCATAGGGAACTGTGTGTGTTTGACCTaGTGGGCTGGAATTATTTAT | + |
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Preference number: 2 (lower is better) Translates to: RIQEMEGRISDVEDSIGNCVCLT*WAGIIY Trigger: ATAAATAATTCCAGCCCATCAGGTCAAACACACACA...GTTCCCTATGGAATCTTCTACATCAGAGATTCTCCCCTCCATCTCTTGTATTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
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| 3UTR-3UTR GCA 90 bp | CCTAAACCACACCAATATCCAACAAAGAAAGAGAACTTCAGACCAATATTCCTCGAGACCCCTTGGTCTTaGAAAGTTTTTATGCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: PKPHQYPTKKENFRPIFLETPWS*KVFMPQ Trigger: CTGAGGCATAAAAACTTTGCAAGACCAAGGGGTCTC...GAGGAATATTGGTCTGAAGTTCTCTTTCTTTGTTGGATATTGGTGTGGTTTAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
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| 3UTR-3UTR CCA 90 bp | GACAAAGAGGGGCACTTCATACTCATCAAATGTAATATCTTCCAAGATGGACTCAAATTTCTAGGCAAATaGATGGACCTGGAGGCTATC | + |
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Preference number: 2 (lower is better) Translates to: DKEGHFILIKCNIFQDGLKFLGK*MDLEAI Trigger: GATAGCCTCCAGGTCCATCCATTTGCCTAGAAATTT...GAGTCCATCTTGGAAGATATTACATTTGATGAGTATGAAGTGCCCCTCTTTGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
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| 3UTR-3UTR CCA 90 bp | ACCTCACATAATAATAGTGGGAGACTTCAACACCCAACTCTCACCAATGGACAGGAGGTCAAATGTAAGTaGATAAAGGAACTCCACATA | + |
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Preference number: 2 (lower is better) Translates to: TSHNNSGRLQHPTLTNGQEVKCK*IKELHI Trigger: TATGTGGAGTTCCTTTATCCACTTACATTTGACCTC...CTGTCCATTGGTGAGAGTTGGGTGTTGAAGTCTCCCACTATTATTATGTGAGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
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| 3UTR-3UTR CCA 90 bp | ACCTCACATAATAATAGTGGGAGACTTCAACACCCAACTCTCACCAATGGACAGAAGCCAAAATTCAGGTaGAAACTGAACAACACTCTA | + |
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Preference number: 2 (lower is better) Translates to: TSHNNSGRLQHPTLTNGQKPKFR*KLNNTL Trigger: TAGAGTGTTGTTCAGTTTCCACCTGAATTTTGGCTT...CTGTCCATTGGTGAGAGTTGGGTGTTGAAGTCTCCCACTATTATTATGTGAGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
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| 3UTR-3UTR TCA 90 bp | GACAAAGAGGGGCACTTCATACTCATCAAATGTAATATCTTCCAAGATGGACTCTTGCAGCACCAAGCTTaGATTTCCAATTGTATGCAT | + |
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Preference number: 2 (lower is better) Translates to: DKEGHFILIKCNIFQDGLLQHQA*ISNCMH Trigger: ATGCATACAATTGGAAATTCAAGCTTGGTGCTGCAA...GAGTCCATCTTGGAAGATATTACATTTGATGAGTATGAAGTGCCCCTCTTTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
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| 3UTR-3UTR TCA 90 bp | AAAAAGGTCAAGGAACATATAAAGGCAGGCCTGTTAGAATTACTCCAGACTTCTATAATAGCCAGAAGCTaGAAGTACTCAGATGTCCCT | + |
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Preference number: 2 (lower is better) Translates to: KKVKEHIKAGLLELLQTSIIARS*KYSDVP Trigger: AGGGACATCTGAGTACTTTCAGCTTCTGGCTATTAT...AGAAGTCTGGAGTAATTCTAACAGGCCTGCCTTTATATGTTCCTTGACCTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
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| 3UTR-3UTR TCA 90 bp | AAAAAGGTCAAGGAACATATAAAGGCAGGCCTGTTAGAATTACTCCAGACTTCTCTGGCTACACAAACATaGCCCAACATTTTGCTGATT | + |
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Preference number: 2 (lower is better) Translates to: KKVKEHIKAGLLELLQTSLATQT*PNILLI Trigger: AATCAGCAAAATGTTGGGTCATGTTTGTGTAGCCAG...AGAAGTCTGGAGTAATTCTAACAGGCCTGCCTTTATATGTTCCTTGACCTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
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| 3UTR-3UTR CCA 90 bp | CCTAAACCACACCAATATCCAACAAAGAAAGAGAACTTCAGACCAATATTCCTCAAAGCCTGGAAGATATaGGCAAAGGGAAACAATTCC | + |
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Preference number: 2 (lower is better) Translates to: PKPHQYPTKKENFRPIFLKAWKI*AKGNNS Trigger: GGAATTGTTTCCCTTTGCCCATATCTTCCAGGCTTT...GAGGAATATTGGTCTGAAGTTCTCTTTCTTTGTTGGATATTGGTGTGGTTTAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
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| 3UTR-3UTR GCA 90 bp | AGAATACAAGAGATGGAGGGGAGAATCTCTGATGTAGAAGATTCCATAGGGAACCTTGGTCCCATTATTTaGTTTCTTGTTGGATCTTTA | + |
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Preference number: 2 (lower is better) Translates to: RIQEMEGRISDVEDSIGNLGPII*FLVGSL Trigger: TAAAGATCCAACAAGAAAGCAAATAATGGGACCAAG...GTTCCCTATGGAATCTTCTACATCAGAGATTCTCCCCTCCATCTCTTGTATTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
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| 3UTR-3UTR CCA 90 bp | TTATCATGTAGAAGAATGCTAATTGATCCATTCCTATCTCCTTGTACTGAGGTCACGAAGAACAAAGTGTaGACACTTTGCCCCTTCTTA | + |
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Preference number: 2 (lower is better) Translates to: LSCRRMLIDPFLSPCTEVTKNKV*TLCPFL Trigger: TAAGAAGGGGCAAAGTGTCCACACTTTGTTCTTCGT...GACCTCAGTACAAGGAGATAGGAATGGATCAATTAGCATTCTTCTACATGATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
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| 3UTR-3UTR CCA 90 bp | TCATGTAGAAGAATGCTAATTGATCCATTCCTATCTCCTTGTACTGAGGTCAAAATGCTGGAGAGAATGTaGAGAAAAAGGAACACTCCT | + |
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Preference number: 2 (lower is better) Translates to: SCRRMLIDPFLSPCTEVKMLERM*RKRNTP Trigger: AGGAGTGTTCCTTTTTCTCCACATTCTCTCCAGCAT...TTTGACCTCAGTACAAGGAGATAGGAATGGATCAATTAGCATTCTTCTACATGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
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| 3UTR-3UTR TCA 90 bp | CCTAAACCACACCAATATCCAACAAAGAAAGAGAACTTCAGACCAATATTCCTCATGGTATACACTCACTaGAAAGTGGATATTAGGTCA | + |
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Preference number: 2 (lower is better) Translates to: PKPHQYPTKKENFRPIFLMVYTH*KVDIRS Trigger: TGACCTAATATCCACTTTTCAGTGAGTGTATACCAT...GAGGAATATTGGTCTGAAGTTCTCTTTCTTTGTTGGATATTGGTGTGGTTTAGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
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| 3UTR-3UTR TCA 90 bp | ATCAGGAATTCAAAGCCCATACCTAAACATAATAAAAGCAATCTACAGCAAACCGTATATGTGTGTGTTTaGCCTGATGGGCTGGAATTA | + |
|
Preference number: 2 (lower is better) Translates to: IRNSKPIPKHNKSNLQQTVYVCV*PDGLEL Trigger: TAATTCCAGCCCATCAGGTCAAACACACACATATAC...GGTTTGCTGTAGATTGCTTTTATTATGTTTAGGTATGGGCTTTGAATTCCTGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
||
| 3UTR-3UTR CCA 90 bp | AAAAAGGTCAAGGAACATATAAAGGCAGGCCTGTTAGAATTACTCCAGACTTCTAGTGACCCCAAACCTTaGGGATATTACAAATTAACT | + |
|
Preference number: 2 (lower is better) Translates to: KKVKEHIKAGLLELLQTSSDPKP*GYYKLT Trigger: AGTTAATTTGTAATATCCCCAAGGTTTGGGGTCACT...AGAAGTCTGGAGTAATTCTAACAGGCCTGCCTTTATATGTTCCTTGACCTTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
||
| 3UTR-3UTR CCA 90 bp | GACAAAGAGGGGCACTTCATACTCATCAAATGTAATATCTTCCAAGATGGACTCGGTACATTTACACAATaGAGTACTAGTCAGCTATTA | + |
|
Preference number: 2 (lower is better) Translates to: DKEGHFILIKCNIFQDGLGTFTQ*STSQLL Trigger: TAATAGCTGACTAGTACTCCATTGTGTAAATGTACC...GAGTCCATCTTGGAAGATATTACATTTGATGAGTATGAAGTGCCCCTCTTTGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
||
| 3UTR-3UTR CCA 90 bp | CCTAAACCACACCAATATCCAACAAAGAAAGAGAACTTCAGACCAATATTCCTCGGAGCAAAATACACATaGAGGAGATACAGAGATAAA | + |
|
Preference number: 2 (lower is better) Translates to: PKPHQYPTKKENFRPIFLGAKYT*RRYRDK Trigger: TTTATCTCTGTATCTCCTCCATGTGTATTTTGCTCC...GAGGAATATTGGTCTGAAGTTCTCTTTCTTTGTTGGATATTGGTGTGGTTTAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
||
| 3UTR-3UTR CCA 90 bp | TCTTTAGAGTTTAATGAAAATGAAGCCACAACATACCCAAACTTATGGGACACACTCTGGATATCAATCTaGTGGTTCCTCAGAAAATTG | + |
|
Preference number: 2 (lower is better) Translates to: SLEFNENEATTYPNLWDTLWISI*WFLRKL Trigger: CAATTTTCTGAGGAACCACCAGATTGATATCCAGAG...TGTGTCCCATAAGTTTGGGTATGTTGTGGCTTCATTTTCATTAAACTCTAAAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
||
| 3UTR-3UTR CCA 90 bp | AAAAAGGTCAAGGAACATATAAAGGCAGGCCTGTTAGAATTACTCCAGACTTCTAAAACTGCATGGTACTaGTATAGTGATAGACAAGTA | + |
|
Preference number: 2 (lower is better) Translates to: KKVKEHIKAGLLELLQTSKTAWY*YSDRQV Trigger: TACTTGTCTATCACTATACCAGTACCATGCAGTTTT...AGAAGTCTGGAGTAATTCTAACAGGCCTGCCTTTATATGTTCCTTGACCTTTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
||
| 3UTR-3UTR TCA 90 bp | TCTTTAGAGTTTAATGAAAATGAAGCCACAACATACCCAAACTTATGGGACACAAAAAACTCATCTCAATaGAAAAAGAACCTCTGGTGG | + |
|
Preference number: 2 (lower is better) Translates to: SLEFNENEATTYPNLWDTKNSSQ*KKNLWW Trigger: CCACCAGAGGTTCTTTTTTCATTGAGATGAGTTTTT...TGTGTCCCATAAGTTTGGGTATGTTGTGGCTTCATTTTCATTAAACTCTAAAGA 36% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
||
| 3UTR-3UTR CCA 90 bp | ATCAGGAATTCAAAGCCCATACCTAAACATAATAAAAGCAATCTACAGCAAACCGTACTCACTGATAAGTaGATATTAGCACAGAAACTT | + |
|
Preference number: 2 (lower is better) Translates to: IRNSKPIPKHNKSNLQQTVLTDK*ILAQKL Trigger: AAGTTTCTGTGCTAATATCCACTTATCAGTGAGTAC...GGTTTGCTGTAGATTGCTTTTATTATGTTTAGGTATGGGCTTTGAATTCCTGAT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
||
| 3UTR GCA 72 bp | TGTACACCAGGCTGGCCTCAAACTCAGAAATCCACCTaGCTCTGCCTCCCGTGTGTTGGGATTAAAGGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: CTPGWPQTQKST*LCLPCVGIKGR Trigger: CCTTCCTTTAATCCCAACACACGGGAGGCAGAGGCAGGTGGATTTCTGAGTTTGAGGCCAGCCTGGTGTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
||
| 3UTR TCA 72 bp | GAGGCTATTCCGATGCATGGCAAACACAGAAGTGGATaGTCACAGTCAACTATTGGATGGAACACAGGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: EAIPMHGKHRSG*SQSTIGWNTGP Trigger: GGGCCCTGTGTTCCATCCAATAGTTGACTGTGATCATCCACTTCTGTGTTTGCCATGCATCGGAATAGCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
||
| 3UTR GCA 72 bp | GAGGTTCTGCCAGTGCCTGACAAATACAGAGGTAGATaGTCTCAGTCAAACATTGGACTGACCACAAGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: EVLPVPDKYRGR*SQSNIGLTTRS Trigger: GGACCTTGTGGTCAGTCCAATGTTTGACTGAGAGCATCTACCTCTGTATTTGTCAGGCACTGGCAGAACCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
||
| 3UTR TCA 72 bp | ATTGTAGATATCAACAAGTGCTTGCTGACAGGAGCCTaGTATAGCTCTCTCCTGAGAGGTTCTGCCAGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: IVDINKCLLTGA*YSSLLRGSASA Trigger: GGCACTGGCAGAACCTCTCAGGAGAGAGCTATATCAGGCTCCTGTCAGCAAGCACTTGTTGATATCTACAAT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
||
| 3UTR GCA 72 bp | GAACTAGCCAGTAACCCTAGACCTTGTGTCTCTAGCTaGATATGTATCAGAAGATGGCCTAGTCTGCTATCA | + |
|
Preference number: 3 (lower is better) Translates to: ELASNPRPCVSS*ICIRRWPSLLS Trigger: TGATAGCAGACTAGGCCATCTTCTGATACATATGCAGCTAGAGACACAAGGTCTAGGGTTACTGGCTAGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
||
| 3UTR GCA 72 bp | GGAGAAAAAGGAACACTCCTCCATTGTTGGTGGGATTaGAAGCTTGTACAACCACTCTGGATATCAATCTGG | + |
|
Preference number: 3 (lower is better) Translates to: GEKGTLLHCWWD*KLVQPLWISIW Trigger: CCAGATTGATATCCAGAGTGGTTGTACAAGCTTGCAATCCCACCAACAATGGAGGAGTGTTCCTTTTTCTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
||
| 3UTR GCA 72 bp | CCGTGTGTTGGGATTAAAGGAAGGCATGTGCCAGCATaGCCGGCTTCTATCCTTATCTTTATAGGACTTTTT | + |
|
Preference number: 3 (lower is better) Translates to: PCVGIKGRHVPA*PASILIFIGLF Trigger: AAAAAGTCCTATAAAGATAAGGATAGAAGCCGGGCATGCTGGCACATGCCTTCCTTTAATCCCAACACACGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
||
| 3UTR TCA 72 bp | AGGCAAATGGATGGACCTGGAGGCTATCATCCTGAGTaGGGTAACTCAATCACAAAAGAACTCACACGATAT | + |
|
Preference number: 3 (lower is better) Translates to: RQMDGPGGYHPE*GNSITKELTRY Trigger: ATATCGTGTGAGTTCTTTTGTGATTGAGTTACCTCACTCAGGATGATAGCCTCCAGGTCCATCCATTTGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
||
| 3UTR TCA 72 bp | CAGGAAGAGAATACAAGAGATGGAGGGGAGAATCTCTaGTGTAGAAGATTCCATAGGGAACATGGACACAAC | + |
|
Preference number: 3 (lower is better) Translates to: QEENTRDGGENL*CRRFHREHGHN Trigger: GTTGTGTCCATGTTCCCTATGGAATCTTCTACATCAGAGATTCTCCCCTCCATCTCTTGTATTCTCTTCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
||
| 3UTR CCA 72 bp | CATTGTTGGTGGGATTGCAAGCTTGTACAACCACTCTaGATATCAATCTGGTGGTTCCTCAGAAAATTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: HCWWDCKLVQPL*ISIWWFLRKLD Trigger: GTCCAATTTTCTGAGGAACCACCAGATTGATATCCAGAGTGGTTGTACAAGCTTGCAATCCCACCAACAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
||
| 3UTR CCA 72 bp | GAATGTGGAGAAAAAGGAACACTCCTCCATTGTTGGTaGGATTGCAAGCTTGTACAACCACTCTGGATATCA | + |
|
Preference number: 3 (lower is better) Translates to: ECGEKGTLLHCW*DCKLVQPLWIS Trigger: TGATATCCAGAGTGGTTGTACAAGCTTGCAATCCCACCAACAATGGAGGAGTGTTCCTTTTTCTCCACATTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
||
| 3UTR CCA 72 bp | AGACAAAAGGAAAGATCATGCAGAGACTGCCTCAGCTaGGGATCCACCCCATATACAGTTACCAAACTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: RQKERSCRDCLS*GSTPYTVTKLK Trigger: TTTAAGTTTGGTAACTGTATATGGGGTGGATCCCCAGCTGAGGCAGTCTCTGCATGATCTTTCCTTTTGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
||
| 3UTR-3UTR CAA 90 bp | GACAAAGAGGGGCACTTCATACTCATCAAATGTAATATCTTCCAAGATGGACTCGGTGGGATTGCAAGCTaGTACAACCACTCTGGATAT | + |
|
Preference number: 3 (lower is better) Translates to: DKEGHFILIKCNIFQDGLGGIAS*YNHSGY Trigger: ATATCCAGAGTGGTTGTACAAGCTTGCAATCCCACC...GAGTCCATCTTGGAAGATATTACATTTGATGAGTATGAAGTGCCCCTCTTTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
||
| 3UTR-3UTR CAA 90 bp | ACCTCACATAATAATAGTGGGAGACTTCAACACCCAACTCTCACCAATGGACAGAGAGAGTCCTCCAATTaGACTAGAAGATATGGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: TSHNNSGRLQHPTLTNGQRESSN*TRRYGS Trigger: AGACCCATATCTTCTAGTCAAATTGGAGGACTCTCT...CTGTCCATTGGTGAGAGTTGGGTGTTGAAGTCTCCCACTATTATTATGTGAGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
||
| 3UTR TCA 72 bp | AGTAGCAGTCTGACAGCACACTTAGAAGCTCTAGAATaGAAGGAAGCAAATTCAGCGAAAAGGAGTAGATGG | + |
|
Preference number: 3 (lower is better) Translates to: SSSLTAHLEALE*KEANSAKRSRW Trigger: CCATCTACTCCTTTTCGCTGAATTTGCTTCCTTTCATTCTAGAGCTTCTAAGTGTGCTGTCAGACTGCTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
||
| 3UTR TCA 72 bp | AGGCTCCAATTAGATATATTGAGAGCAGCAAGCACTTaGGATAATCAGATGGCAGGAGGCAAGCATAAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: RLQLDILRAAST*DNQMAGGKHKN Trigger: GTTCTTATGCTTGCCTCCTGCCATCTGATTATCTCAAGTGCTTGCTGCTCTCAATATATCTAATTGGAGCCT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
||
| 3UTR CCA 72 bp | GATTGCAAGCTTGTACAACCACTCTGGATATCAATCTaGTGGTTCCTCAGAAAATTGGACATAGTACTACCG | + |
|
Preference number: 3 (lower is better) Translates to: DCKLVQPLWISI*WFLRKLDIVLP Trigger: CGGTAGTACTATGTCCAATTTTCTGAGGAACCACCAGATTGATATCCAGAGTGGTTGTACAAGCTTGCAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
||
| 3UTR CCA 72 bp | AGCATAAGAACAGAAGCAACAGAAACCAAGGTTACTTaGCATCATCAGAACCAAATTCTCCTAGGACATGCC | + |
|
Preference number: 3 (lower is better) Translates to: SIRTEATETKVT*HHQNQILLGHA Trigger: GGCATGTCCTAGGAGAATTTGGTTCTGATGATGCCAAGTAACCTTGGTTTCTGTTGCTTCTGTTCTTATGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
||
| 3UTR CCA 72 bp | CACAGGACCACACAATCAAAGGATCATAGAGAAAGCTaGAATCTGAGGAGTCCTGAATCAACTGGGATTATT | + |
|
Preference number: 3 (lower is better) Translates to: HRTTQSKDHRES*NLRSPESTGII Trigger: AATAATCCCAGTTGATTCAGGACTCCTCAGATTCCAGCTTTCTCTATGATCCTTTGATTGTGTGGTCCTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
||
| 3UTR TCA 72 bp | ATGGTGATACCATTGCATACACCAGCAAGATTTTGCTaGAAGGATCCTGATATACCTGTCTCTTATGAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: MVIPLHTPARFC*KDPDIPVSYEA Trigger: AGCCTCATAAGAGACAGGTATATCAGGATCCTTTCAGCAAAATCTTGCTGGTGTATGCAATGGTATCACCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
||
| 3UTR TCA 72 bp | AAGTACAGCAGTGTATGCTGGCATTTGTGGAATCTTTaGGTTTATAACACATCTATCTGTCCAGGCATGTCC | + |
|
Preference number: 3 (lower is better) Translates to: KYSSVCWHLWNL*VYNTSICPGMS Trigger: GGACATGCCTGGACAGATAGATGTGTTATAAACTCAAAGATTCCACAAATGCCAGCATACACTGCTGTACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
||
| 3UTR TCA 72 bp | ATAAACTGGCTACACAAACATGACCCAACATTTTGCTaGTTACAGGAATCCCACCTCAGGGAAAAAGACAGA | + |
|
Preference number: 3 (lower is better) Translates to: INWLHKHDPTFC*LQESHLREKDR Trigger: TCTGTCTTTTTCCCTGAGGTGGGATTCCTGTAATCAGCAAAATGTTGGGTCATGTTTGTGTAGCCAGTTTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
||
| 3UTR TCA 72 bp | ACTCCAGACTTCTCACCAGAGATTATGAAAGCCATATaGTCCTGGACAGATGTTATACACACACTAAGAGAC | + |
|
Preference number: 3 (lower is better) Translates to: TPDFSPEIMKAI*SWTDVIHTLRD Trigger: GTCTCTTAGTGTGTGTATAACATCTGTCCAGGATCATATGGCTTTCATAATCTCTGGTGAGAAGTCTGGAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
||
| 3UTR GCA 72 bp | GATAATAACCCTAGGAAAGAAATTAGGAACCATAGATaGGAGGATCAGGAAGAGAATACAAGAGATGGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: DNNPRKEIRNHR*EDQEENTRDGG Trigger: CCCTCCATCTCTTGTATTCTCTTCCTGATCCTCGCATCTATGGTTCCTAATTTCTTTCCTAGGGTTATTATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
||
| 3UTR TCA 72 bp | ATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTaGAAGTACTCAGATGTCCCTCAACAGGGGAATGTA | + |
|
Preference number: 3 (lower is better) Translates to: MFIAALFIIARS*KYSDVPQQGNV Trigger: TACATTCCCCTGTTGAGGGACATCTGAGTACTTTCAGCTTCTGGCTATTATAAATAAGGCTGCTATGAACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
||
| 3UTR TCA 72 bp | AGCAGCAGCGAAGAACCAGGGAGTCACCAGAAAGGGTaGATTTATTCATCACTAATTCAACTTAATTACATC | + |
|
Preference number: 3 (lower is better) Translates to: SSSEEPGSHQKG*IYSSLIQLNYI Trigger: GATGTAATTAAGTTGAATTAGTGATGAATAAATTCACCCTTTCTGGTGACTCCCTGGTTCTTCGCTGCTGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
||
| 3UTR CCA 72 bp | CCATTCCTATCTCCTTGTACTGAGGTCAAATGTAAGTaGATAAAGGAACTCCACATAAATACAGAGACAGTG | + |
|
Preference number: 3 (lower is better) Translates to: PFLSPCTEVKCK*IKELHINTETV Trigger: CACTGTCTCTGTATTTATGTGGAGTTCCTTTATCCACTTACATTTGACCTCAGTACAAGGAGATAGGAATGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
||
| 3UTR-3UTR CAA 90 bp | CCTTGTACTGAGGTCAAATGTAAGTGGATAAAGGAACTCCACATAAATACAGAGTTTGCAGCACCAAGCTaGAATTTCCAATTGTATGCA | + |
|
Preference number: 3 (lower is better) Translates to: PCTEVKCKWIKELHINTEFAAPS*NFQLYA Trigger: TGCATACAATTGGAAATTCAAGCTTGGTGCTGCAAA...CTCTGTATTTATGTGGAGTTCCTTTATCCACTTACATTTGACCTCAGTACAAGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
||
| 3UTR TCA 72 bp | CTGTTAGAATTACTCCAGACTTCTCACCAGAGATTATaGAAGCCATATGATCCTGGACAGATGTTATACACA | + |
|
Preference number: 3 (lower is better) Translates to: LLELLQTSHQRL*KPYDPGQMLYT Trigger: TGTGTATAACATCTGTCCAGGATCATATGGCTTTCATAATCTCTGGTGAGAAGTCTGGAGTAATTCTAACAG 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
||
| 3UTR-3UTR CAA 90 bp | TCATGTAGAAGAATGCTAATTGATCCATTCCTATCTCCTTGTACTGAGGTCAAAGTTAAGAGAGACCCCTaGGTCTTGCAAAGTTTTTAT | + |
|
Preference number: 3 (lower is better) Translates to: SCRRMLIDPFLSPCTEVKVKRDP*VLQSFY Trigger: ATAAAAACTTTGCAAGACCAAGGGGTCTCTCTTAAC...TTTGACCTCAGTACAAGGAGATAGGAATGGATCAATTAGCATTCTTCTACATGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
||
| 3UTR-3UTR CAA 90 bp | CCTAAACCACACCAATATCCAACAAAGAAAGAGAACTTCAGACCAATATTCCTCATTTTAGGCTTCTTGTaGGGTAGAGTACTCATCTTT | + |
|
Preference number: 3 (lower is better) Translates to: PKPHQYPTKKENFRPIFLILGFL*GRVLIF Trigger: AAAGATGAGTACTCTACCCAACAAGAAGCCTAAAAT...GAGGAATATTGGTCTGAAGTTCTCTTTCTTTGTTGGATATTGGTGTGGTTTAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
||
| 3UTR TCA 72 bp | CCCAATAACAAAAGGACACATATGGTATACACTCACTaGAAAGTGGATATTAGGTCAAAAGCTCAGAATACC | + |
|
Preference number: 3 (lower is better) Translates to: PNNKRTHMVYTH*KVDIRSKAQNT Trigger: GGTATTCTGAGCTTTTGACCTAATATCCACTTTTCAGTGAGTGTATACCATATGTGTCCTTTTGTTATTGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
||
| 3UTR TCA 72 bp | TCAAATGTAATATCTTCCAAGATGGACTCTCAATTCTaGATAACTATGCTCCAAATGCAAGAGCAGGCACAT | + |
|
Preference number: 3 (lower is better) Translates to: SNVISSKMDSQF*ITMLQMQEQAH Trigger: ATGTGCCTGCTCTTGCATTTGGAGCATAGTTATTCAGAATTGAGAGTCCATCTTGGAAGATATTACATTTGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
||
| 3UTR CCA 72 bp | ATTACAAAGAATGAATTTATGAAATTTCTAGGCAAATaGATGGACCTGGAGGCTATCATCCTGAGTGAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: ITKNEFMKFLGK*MDLEAIILSEV Trigger: TACCTCACTCAGGATGATAGCCTCCAGGTCCATCCATTTGCCTAGAAATTTCATAAATTCATTCTTTGTAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
||
| 3UTR CAA 72 bp | AAACTCAGAAATCCACCTGCCTCTGCCTCCCGTGTGTaGGGATTAAAGGAAGGCATGTGCCAGCATGCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: KLRNPPASASRV*GLKEGMCQHAR Trigger: CCGGGCATGCTGGCACATGCCTTCCTTTAATCCCAACACACGGGAGGCAGAGGCAGGTGGATTTCTGAGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
||
| CDS-3UTR TCA 90 bp | GAGCAGCAGCGAAGAACCAGGGAGTCACCAGAAAGGGTGAATTTATTCATCACTCTTCCCCATTCCTTCTaGCTGACTTTGTTTGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EQQRRTRESPERVNLFITLPHSF*LTLFGL Trigger: CAGCCCAAACAAAGTCAGTCAGAAGGAATGGGGAAG...AGTGATGAATAAATTCACCCTTTCTGGTGACTCCCTGGTTCTTCGCTGCTGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
||
| CDS-3UTR GCA 90 bp | TGCCTCCCGTGTGTTGGGATTAAAGGAAGGCATGTGCCAGCATGCCCGGCTTCTCATAACAAACAACACTaGAACAACATAGACTGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: CLPCVGIKGRHVPACPASHNKQH*NNIDCN Trigger: GTTGCAGTCTATGTTGTTGCAGTGTTGTTTGTTATG...AGAAGCCGGGCATGCTGGCACATGCCTTCCTTTAATCCCAACACACGGGAGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
||
| 3UTR CAA 72 bp | CTGGAGAGAATGTGGAGAAAAAGGAACACTCCTCCATaGTTGGTGGGATTGCAAGCTTGTACAACCACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LERMWRKRNTPP*LVGLQACTTTL Trigger: CAGAGTGGTTGTACAAGCTTGCAATCCCACCAACAATGGAGGAGTGTTCCTTTTTCTCCACATTCTCTCCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
||
| CDS-3UTR TCA 90 bp | GAGCAGCAGCGAAGAACCAGGGAGTCACCAGAAAGGGTGAATTTATTCATCACTAAAACCCAAGAAGAATaGATTCCATCAGTGTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: EQQRRTRESPERVNLFITKTQEE*IPSVWR Trigger: CCTCCACACTGATGGAATTCATTCTTCTTGGGTTTT...AGTGATGAATAAATTCACCCTTTCTGGTGACTCCCTGGTTCTTCGCTGCTGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
||
| CDS-3UTR CCA 90 bp | CCTAAACCACACCAATATCCAACAAAGAAAGAGAACTTCAGACCAATATTCCTCGGTGAGACGAGCAGGTaGAAAAAGCCTTGGCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: PKPHQYPTKKENFRPIFLGETSR*KKPWPS Trigger: GGATGGCCAAGGCTTTTTCCACCTGCTCGTCTCACC...GAGGAATATTGGTCTGAAGTTCTCTTTCTTTGTTGGATATTGGTGTGGTTTAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
||
| 3UTR CAA 72 bp | GAGAGAATGTGGAGAAAAAGGAACACTCCTCCATTGTaGGTGGGATTGCAAGCTTGTACAACCACTCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: ERMWRKRNTPPL*VGLQACTTTLD Trigger: ATCCAGAGTGGTTGTACAAGCTTGCAATCCCACCAACAATGGAGGAGTGTTCCTTTTTCTCCACATTCTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
||
| CDS-3UTR CCA 90 bp | TCCAAAAAGAAACTAGAGAGAGCATACAGTAGCAGTCTGACAGCACACTTAGAACTGCCCAATTTCTACTaGAATCCCACTGATCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SKKKLERAYSSSLTAHLELPNFY*NPTDPG Trigger: TCCTGGATCAGTGGGATTCCAGTAGAAATTGGGCAG...TTCTAAGTGTGCTGTCAGACTGCTACTGTATGCTCTCTCTAGTTTCTTTTTGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
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| CDS-3UTR TCA 90 bp | GACAAAGAGGGGCACTTCATACTCATCAAATGTAATATCTTCCAAGATGGACTCAGCACCCACTGCAAATaGGGAACATTAGAAAACCCA | + |
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Preference number: 4 (lower is better) Translates to: DKEGHFILIKCNIFQDGLSTHCK*GTLENP Trigger: TGGGTTTTCTAATGTTCCTCATTTGCAGTGGGTGCT...GAGTCCATCTTGGAAGATATTACATTTGATGAGTATGAAGTGCCCCTCTTTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
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| CDS-3UTR TCA 90 bp | TCTTTAGAGTTTAATGAAAATGAAGCCACAACATACCCAAACTTATGGGACACACACCACAAGCAAGCTTaGGAAGTGGGGGAATGTCAC | + |
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Preference number: 4 (lower is better) Translates to: SLEFNENEATTYPNLWDTHHKQA*EVGECH Trigger: GTGACATTCCCCCACTTCTCAAGCTTGCTTGTGGTG...TGTGTCCCATAAGTTTGGGTATGTTGTGGCTTCATTTTCATTAAACTCTAAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
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| CDS-3UTR GCA 90 bp | GAGCAGCAGCGAAGAACCAGGGAGTCACCAGAAAGGGTGAATTTATTCATCACTTGCAACAACATAGACTaGAACTGTATTCATAAAGGT | + |
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Preference number: 4 (lower is better) Translates to: EQQRRTRESPERVNLFITCNNID*NCIHKG Trigger: ACCTTTATGAATACAGTTGCAGTCTATGTTGTTGCA...AGTGATGAATAAATTCACCCTTTCTGGTGACTCCCTGGTTCTTCGCTGCTGCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
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| 3UTR CAA 72 bp | AAGCATAAGAACAGAAGCAACAGAAACCAAGGTTACTaGGCATCATCAGAACCAAATTCTCCTAGGACATGC | + |
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Preference number: 4 (lower is better) Translates to: KHKNRSNRNQGY*ASSEPNSPRTC Trigger: GCATGTCCTAGGAGAATTTGGTTCTGATGATGCCAAGTAACCTTGGTTTCTGTTGCTTCTGTTCTTATGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
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| CDS-3UTR CCA 90 bp | AGAATACAAGAGATGGAGGGGAGAATCTCTGATGTAGAAGATTCCATAGGGAACAAGCTGGGATCAAAATaGTGTAGAAAAGAGACAGCA | + |
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Preference number: 4 (lower is better) Translates to: RIQEMEGRISDVEDSIGNKLGSK*CRKETA Trigger: TGCTGTCTCTTTTCTACACCATTTTGATCCCAGCTT...GTTCCCTATGGAATCTTCTACATCAGAGATTCTCCCCTCCATCTCTTGTATTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
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| CDS-3UTR TCA 90 bp | AAAAAGGTCAAGGAACATATAAAGGCAGGCCTGTTAGAATTACTCCAGACTTCTTTCTCAGTGCCATCATaGTATCTTTGTTCCTCAGAC | + |
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Preference number: 4 (lower is better) Translates to: KKVKEHIKAGLLELLQTSFSVPS*YLCSSD Trigger: GTCTGAGGAACAAAGATATCATGATGGCACTGAGAA...AGAAGTCTGGAGTAATTCTAACAGGCCTGCCTTTATATGTTCCTTGACCTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
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| 3UTR CAA 72 bp | CCTGATGGGCTGGAATTATTTATACCCTGTGTTTTCTaGCATATAGCTAACTTAATGAAGTTGGAATTTACC | + |
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Preference number: 4 (lower is better) Translates to: PDGLELFIPCVF*HIANLMKLEFT Trigger: GGTAAATTCCAACTTCATTAAGTTAGCTATATGCAAGAAAACACAGGGTATAAATAATTCCAGCCCATCAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
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| CDS-3UTR CAA 90 bp | GAGCAGCAGCGAAGAACCAGGGAGTCACCAGAAAGGGTGAATTTATTCATCACTTCACCACAAGCAAGCTaGAGAAGTGGGGGAATGTCA | + |
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Preference number: 5 (lower is better) Translates to: EQQRRTRESPERVNLFITSPQAS*RSGGMS Trigger: TGACATTCCCCCACTTCTCAAGCTTGCTTGTGGTGA...AGTGATGAATAAATTCACCCTTTCTGGTGACTCCCTGGTTCTTCGCTGCTGCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
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| CDS-3UTR CAA 90 bp | GAGCAGCAGCGAAGAACCAGGGAGTCACCAGAAAGGGTGAATTTATTCATCACTGCCTTGGCCATCCCTTaGGCTGAAGATAGTTTCATA | + |
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Preference number: 5 (lower is better) Translates to: EQQRRTRESPERVNLFITALAIP*AEDSFI Trigger: TATGAAACTATCTTCAGCCAAAGGGATGGCCAAGGC...AGTGATGAATAAATTCACCCTTTCTGGTGACTCCCTGGTTCTTCGCTGCTGCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
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| CDS TCA 90 bp | GGGAGAATATCTGGTAGGTCTGCCCAATTTCTACTGGAATCCCACTaGTCCAGGAGGCAGCTACCAGCTGTAAACACACTTTATTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: GRISGRSAQFLLESH*SRRQLPAVNTLYSS Trigger: TGAAGAATAAAGTGTGTTTACAGCTGGTAGCTGCCTCCTGGATCAGTGGGATTCCAGTAGAAATTGGGCAGACCTACCAGATATTCTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090717.5 ENSMUST00000216364.4 |
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| CDS-3UTR CAA 90 bp | GACAAAGAGGGGCACTTCATACTCATCAAATGTAATATCTTCCAAGATGGACTCGCCATCATGATATCTTaGTTCCTCAGACTGTATATA | + |
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Preference number: 5 (lower is better) Translates to: DKEGHFILIKCNIFQDGLAIMIS*FLRLYI Trigger: TATATACAGTCTGAGGAACAAAGATATCATGATGGC...GAGTCCATCTTGGAAGATATTACATTTGATGAGTATGAAGTGCCCCTCTTTGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216364.4 |
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| CDS TCA 72 bp | TCTGGTAGGTCTGCCCAATTTCTACTGGAATCCCACTaGTCCAGGAGGCAGCTACCAGCTGTAAACACACTT | + |
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Preference number: 6 (lower is better) Translates to: SGRSAQFLLESH*SRRQLPAVNTL Trigger: AAGTGTGTTTACAGCTGGTAGCTGCCTCCTGGATCAGTGGGATTCCAGTAGAAATTGGGCAGACCTACCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090717.5 ENSMUST00000216364.4 |
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