Pregenerated sensors for OLFR1113 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070857Ensembl transcript IDs: ENSMUST00000079966.4, ENSMUST00000215611.2
Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | CCATCTCATCCTCTTCCCAGTCCCTCTACCGCACCTTACCTCTCCTaGGATCCATCTCTACTCTTGTGGACCTTCAGAATGGAGCAGACT | + |
Preference number: 1 (lower is better) Translates to: PSHPLPSPSTAPYLS*DPSLLLWTFRMEQT Trigger: AGTCTGCTCCATTCTGAAGGTCCACAAGAGTAGAGATGGATCTCAGGAGAGGTAAGGTGCGGTAGAGGGACTGGGAAGAGGATGAGATGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215611.2 |
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3UTR-3UTR CCA 90 bp | CTCATCCTCTTCCCAGTCCCTCTACCGCACCTTACCTCTCCTGAGATCCATCTCTTTATAAGGACATTTTaGCACCAGGAAAGAACAAAC | + |
Preference number: 2 (lower is better) Translates to: LILFPVPLPHLTSPEIHLFIRTF*HQERTN Trigger: GTTTGTTCTTTCCTGGTGCCAAAATGTCCTTATAAA...GAGATGGATCTCAGGAGAGGTAAGGTGCGGTAGAGGGACTGGGAAGAGGATGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215611.2 |
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3UTR-3UTR TCA 90 bp | CTATACACTAATACTAGGTACATATCGTCATATCAAAGCTGGAGGAAGCAACTCGCTTGCAGTTATGTTTaGAGAATAGAGTCCATTATG | + |
Preference number: 2 (lower is better) Translates to: LYTNTRYISSYQSWRKQLACSYV*RIESIM Trigger: CATAATGGACTCTATTCTTCAAACATAACTGCAAGC...GAGTTGCTTCCTCCAGCTTTGATATGACGATATGTACCTAGTATTAGTGTATAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215611.2 |
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3UTR CCA 72 bp | TACACTAATACTAGGTACATATCGTCATATCAAAGCTaGAGGAAGCAACTCAGTAGTTGTACATCAAGTATC | + |
Preference number: 3 (lower is better) Translates to: YTNTRYISSYQS*RKQLSSCTSSI Trigger: GATACTTGATGTACAACTACTGAGTTGCTTCCTCCAGCTTTGATATGACGATATGTACCTAGTATTAGTGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215611.2 |
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CDS-3UTR TCA 90 bp | CTCATCCTCTTCCCAGTCCCTCTACCGCACCTTACCTCTCCTGAGATCCATCTCGAATGGGAACACCAATaGCCCAGGAACCAACTACTA | + |
Preference number: 4 (lower is better) Translates to: LILFPVPLPHLTSPEIHLEWEHQ*PRNQLL Trigger: TAGTAGTTGGTTCCTGGGTCATTGGTGTTCCCATTC...GAGATGGATCTCAGGAGAGGTAAGGTGCGGTAGAGGGACTGGGAAGAGGATGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215611.2 |
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CDS-3UTR GCA 90 bp | CATCTCTACTCTTGTGGACCTTCAGAATGGAGCAGACTTCTCAGGGATATCAACAAGTACATGGGGGTTTaGAGAGTGGGTTCAACCTTT | + |
Preference number: 4 (lower is better) Translates to: HLYSCGPSEWSRLLRDINKYMGV*RVGSTF Trigger: AAAGGTTGAACCCACTCTGCAAACCCCCATGTACTT...GTTGATATCCCTGAGAAGTCTGCTCCATTCTGAAGGTCCACAAGAGTAGAGATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215611.2 |
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CDS-3UTR TCA 90 bp | GACTTCTCAGGGATATCAACTGTACAAAGCATAACACTATACACTAATACTAGGTATGTCTGCCCCACCTaGATGGGAACACCAATGACC | + |
Preference number: 4 (lower is better) Translates to: DFSGISTVQSITLYTNTRYVCPT*MGTPMT Trigger: GGTCATTGGTGTTCCCATTCAGGTGGGGCAGACATA...CCTAGTATTAGTGTATAGTGTTATGCTTTGTACAGTTGATATCCCTGAGAAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215611.2 |
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CDS-3UTR GCA 90 bp | CACTATACACTAATACTAGGTACATATCGTCATATCAAAGCTGGAGGAAGCAACCCAAAGAGAAACCAGTaGAATTGGGGAATATCAGAA | + |
Preference number: 4 (lower is better) Translates to: HYTLILGTYRHIKAGGSNPKRNQ*NWGISE Trigger: TTCTGATATTCCCCAATTGCACTGGTTTCTCTTTGG...GTTGCTTCCTCCAGCTTTGATATGACGATATGTACCTAGTATTAGTGTATAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215611.2 |
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3UTR CAA 72 bp | GACATTTTGGCACCAGGAAAGAACAAACATTTCTTATaGACTTATAAACCTCTTTTGACCAGTACAAAGCAA | + |
Preference number: 4 (lower is better) Translates to: DILAPGKNKHFL*TYKPLLTSTKQ Trigger: TTGCTTTGTACTGGTCAAAAGAGGTTTATAAGTCAATAAGAAATGTTTGTTCTTTCCTGGTGCCAAAATGTC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215611.2 |
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CDS-3UTR CCA 90 bp | TTATTGACTTATAAACCTCTTTTGACCAGTACAAAGCAAGGAGAAACACTGATGCAAGGGATTGAACATTaGAGTCAAAATGGTGTAAAA | + |
Preference number: 4 (lower is better) Translates to: LLTYKPLLTSTKQGETLMQGIEH*SQNGVK Trigger: TTTTACACCATTTTGACTCCAATGTTCAATCCCTTG...CATCAGTGTTTCTCCTTGCTTTGTACTGGTCAAAAGAGGTTTATAAGTCAATAA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215611.2 |
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CDS TCA 90 bp | GAGACAAAATCTGATATGTCTGCCCCACCTGAATGGGAACACCAATaGCCCAGGAACCAACTACTAACTGGGTACACACCTTGGAACTCA | + |
Preference number: 5 (lower is better) Translates to: ETKSDMSAPPEWEHQ*PRNQLLTGYTPWNS Trigger: TGAGTTCCAAGGTGTGTACCCAGTTAGTAGTTGGTTCCTGGGTCATTGGTGTTCCCATTCAGGTGGGGCAGACATATCAGATTTTGTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079966.4 ENSMUST00000215611.2 |
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CDS-3UTR CAA 90 bp | TATCAAAGCTGGAGGAAGCAACTCAGTAGTTGTACATCAAGTATCCCAAAATTTAAAGTACATGGGGGTTaGCAGAGTGGGTTCAACCTT | + |
Preference number: 5 (lower is better) Translates to: YQSWRKQLSSCTSSIPKFKVHGG*QSGFNL Trigger: AAGGTTGAACCCACTCTGCAAACCCCCATGTACTTT...AAATTTTGGGATACTTGATGTACAACTACTGAGTTGCTTCCTCCAGCTTTGATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215611.2 |
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CDS-3UTR CAA 90 bp | CACTATACACTAATACTAGGTACATATCGTCATATCAAAGCTGGAGGAAGCAACGAGAAACCAGTGCAATaGGGGAATATCAGAAAATCC | + |
Preference number: 5 (lower is better) Translates to: HYTLILGTYRHIKAGGSNEKPVQ*GNIRKS Trigger: GGATTTTCTGATATTCCCCAATTGCACTGGTTTCTC...GTTGCTTCCTCCAGCTTTGATATGACGATATGTACCTAGTATTAGTGTATAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215611.2 |
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CDS-3UTR CAA 90 bp | CAACTCAGTAGTTGTACATCAAGTATCCCAAAATTTCCCAAAAGCAAGCAAGAAAACAGAGAGAGAAGTTaGTCTGTCCCCTCAAACTTA | + |
Preference number: 5 (lower is better) Translates to: QLSSCTSSIPKFPKSKQENRERS*SVPSNL Trigger: TAAGTTTGAGGGGACAGACAAACTTCTCTCTCTGTT...TTCTTGCTTGCTTTTGGGAAATTTTGGGATACTTGATGTACAACTACTGAGTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000215611.2 |
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CDS-3UTR CAA 90 bp | ACTAATACTAGGTACATATCGTCATATCAAAGCTGGAGGAAGCAACTCAGTAGTGAAGAAATGGTTAATTaGGTTAGATTCACAGAAGGG | + |
Preference number: 5 (lower is better) Translates to: TNTRYISSYQSWRKQLSSEEMVN*VRFTEG Trigger: CCCTTCTGTGAATCTAACCAAATTAACCATTTCTTC...ACTACTGAGTTGCTTCCTCCAGCTTTGATATGACGATATGTACCTAGTATTAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215611.2 |
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CDS TCA 72 bp | TCTGATATGTCTGCCCCACCTGAATGGGAACACCAATaGCCCAGGAACCAACTACTAACTGGGTACACACCT | + |
Preference number: 6 (lower is better) Translates to: SDMSAPPEWEHQ*PRNQLLTGYTP Trigger: AGGTGTGTACCCAGTTAGTAGTTGGTTCCTGGGTCATTGGTGTTCCCATTCAGGTGGGGCAGACATATCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079966.4 ENSMUST00000215611.2 |
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CDS CAA 72 bp | GATGAAGAGGAAGATTCCAAAGAGAAACCAGTGCAATaGGGGAATATCAGAAAATCCCAAGAGAACAAATTC | + |
Preference number: 6 (lower is better) Translates to: DEEEDSKEKPVQ*GNIRKSQENKF Trigger: GAATTTGTTCTCTTGGGATTTTCTGATATTCCCCAATTGCACTGGTTTCTCTTTGGAATCTTCCTCTTCATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079966.4 ENSMUST00000215611.2 |