RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OLFR1112 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000044487

Ensembl transcript IDs: ENSMUST00000053050.2, ENSMUST00000216772.2

Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR CCA 90 bp AGGAGAACTGTGCATGACAATGGTAGAAAGAAAAGAAAGAAGAAAGAAATTGTGGTGGAGTGGTTCTGTTaGGGACTTTGTAGGGTGGAT +
Preference number: 4 (lower is better)
Translates to: RRTVHDNGRKKRKKKEIVVEWFC*GLCRVD
Trigger: ATCCACCCTACAAAGTCCCCAACAGAACCACTCCAC...CACAATTTCTTTCTTCTTTCTTTTCTTTCTACCATTGTCATGCACAGTTCTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216772.2
CDS-3UTR GCA 90 bp AGGAGAACTGTGCATGACAATGGTAGAAAGAAAAGAAAGAAGAAAGAAATTGTGAAGTACATGGGAGTTTaGAGGGAAGGGTCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: RRTVHDNGRKKRKKKEIVKYMGV*REGSAL
Trigger: AAGAGCTGACCCTTCCCTGCAAACTCCCATGTACTT...CACAATTTCTTTCTTCTTTCTTTTCTTTCTACCATTGTCATGCACAGTTCTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216772.2
CDS-3UTR GCA 90 bp GGAGAACTGTGCATGACAATGGTAGAAAGAAAAGAAAGAAGAAAGAAATTGTGTCTTGGCTCTCCCAGTTaGAGATGGAAGCTTCAGAAT +
Preference number: 4 (lower is better)
Translates to: GELCMTMVERKERRKKLCLGSPS*RWKLQN
Trigger: ATTCTGAAGCTTCCATCTGCAACTGGGAGAGCCAAG...ACACAATTTCTTTCTTCTTTCTTTTCTTTCTACCATTGTCATGCACAGTTCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216772.2
CDS-3UTR TCA 90 bp AGGAGAACTGTGCATGACAATGGTAGAAAGAAAAGAAAGAAGAAAGAAATTGTGAGTATATCATGGGGTTaGACAGTGGAGTCACAACAG +
Preference number: 4 (lower is better)
Translates to: RRTVHDNGRKKRKKKEIVSISWG*TVESQQ
Trigger: CTGTTGTGACTCCACTGTTCAACCCCATGATATACT...CACAATTTCTTTCTTCTTTCTTTTCTTTCTACCATTGTCATGCACAGTTCTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216772.2
CDS-3UTR CCA 90 bp GGAGAACTGTGCATGACAATGGTAGAAAGAAAAGAAAGAAGAAAGAAATTGTGTCATGGGGTTGAACAGTaGAGTCACAACAGTATAGAA +
Preference number: 4 (lower is better)
Translates to: GELCMTMVERKERRKKLCHGVEQ*SHNSIE
Trigger: TTCTATACTGTTGTGACTCCACTGTTCAACCCCATG...ACACAATTTCTTTCTTCTTTCTTTTCTTTCTACCATTGTCATGCACAGTTCTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216772.2
CDS-3UTR TCA 90 bp AGGAGAACTGTGCATGACAATGGTAGAAAGAAAAGAAAGAAGAAAGAAATTGTGATAACCTTGGCAGAGTaGCTGACACATAACACATTT +
Preference number: 4 (lower is better)
Translates to: RRTVHDNGRKKRKKKEIVITLAE*LTHNTF
Trigger: AAATGTGTTATGTGTCAGTCACTCTGCCAAGGTTAT...CACAATTTCTTTCTTCTTTCTTTTCTTTCTACCATTGTCATGCACAGTTCTCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216772.2
CDS-3UTR TCA 90 bp AGGAGAACTGTGCATGACAATGGTAGAAAGAAAAGAAAGAAGAAAGAAATTGTGTATGTGAACCCTATATaGACAGGAACTCCACTTATC +
Preference number: 4 (lower is better)
Translates to: RRTVHDNGRKKRKKKEIVYVNPI*TGTPLI
Trigger: GATAAGTGGAGTTCCTGTTCATATAGGGTTCACATA...CACAATTTCTTTCTTCTTTCTTTTCTTTCTACCATTGTCATGCACAGTTCTCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216772.2
CDS-3UTR CCA 90 bp GGAGAACTGTGCATGACAATGGTAGAAAGAAAAGAAAGAAGAAAGAAATTGTGTGCTACAACTATAAGGTaGGAAGAACATGTAGAGAAG +
Preference number: 4 (lower is better)
Translates to: GELCMTMVERKERRKKLCATTIR*EEHVEK
Trigger: CTTCTCTACATGTTCTTCCCACCTTATAGTTGTAGC...ACACAATTTCTTTCTTCTTTCTTTTCTTTCTACCATTGTCATGCACAGTTCTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216772.2
CDS-3UTR CCA 90 bp AGGAGAACTGTGCATGACAATGGTAGAAAGAAAAGAAAGAAGAAAGAAATTGTGGAAATTCTTGCAAGTTaGGAACATCAGAAAAGCCAA +
Preference number: 4 (lower is better)
Translates to: RRTVHDNGRKKRKKKEIVEILAS*EHQKSQ
Trigger: TTGGCTTTTCTGATGTTCCCAACTTGCAAGAATTTC...CACAATTTCTTTCTTCTTTCTTTTCTTTCTACCATTGTCATGCACAGTTCTCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216772.2
CDS-3UTR CAA 90 bp AGGAGAACTGTGCATGACAATGGTAGAAAGAAAAGAAAGAAGAAAGAAATTGTGCCTTGGCTCTCCCAGTaGCAGATGGAAGCTTCAGAA +
Preference number: 5 (lower is better)
Translates to: RRTVHDNGRKKRKKKEIVPWLSQ*QMEASE
Trigger: TTCTGAAGCTTCCATCTGCAACTGGGAGAGCCAAGG...CACAATTTCTTTCTTCTTTCTTTTCTTTCTACCATTGTCATGCACAGTTCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216772.2
CDS-3UTR CAA 90 bp GGAGAACTGTGCATGACAATGGTAGAAAGAAAAGAAAGAAGAAAGAAATTGTGTCAGTATATCATGGGGTaGAACAGTGGAGTCACAACA +
Preference number: 5 (lower is better)
Translates to: GELCMTMVERKERRKKLCQYIMG*NSGVTT
Trigger: TGTTGTGACTCCACTGTTCAACCCCATGATATACTG...ACACAATTTCTTTCTTCTTTCTTTTCTTTCTACCATTGTCATGCACAGTTCTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216772.2
CDS-3UTR CAA 90 bp AGGAGAACTGTGCATGACAATGGTAGAAAGAAAAGAAAGAAGAAAGAAATTGTGAGAAATTCTTGCAAGTaGGGAACATCAGAAAAGCCA +
Preference number: 5 (lower is better)
Translates to: RRTVHDNGRKKRKKKEIVRNSCK*GTSEKP
Trigger: TGGCTTTTCTGATGTTCCCAACTTGCAAGAATTTCT...CACAATTTCTTTCTTCTTTCTTTTCTTTCTACCATTGTCATGCACAGTTCTCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216772.2
CDS-3UTR CAA 90 bp AGGAGAACTGTGCATGACAATGGTAGAAAGAAAAGAAAGAAGAAAGAAATTGTGCCCAAAAAGAAATTCTaGCAAGTTGGGAACATCAGA +
Preference number: 5 (lower is better)
Translates to: RRTVHDNGRKKRKKKEIVPKKKF*QVGNIR
Trigger: TCTGATGTTCCCAACTTGCAAGAATTTCTTTTTGGG...CACAATTTCTTTCTTCTTTCTTTTCTTTCTACCATTGTCATGCACAGTTCTCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000216772.2
CDS CCA 72 bp GAAAAGCCAAGTAAGATGAATGCTACAAATGTGGAGTaGTTCTGTTGGGGACTTTGTAGGGTGGATCCATCC +
Preference number: 6 (lower is better)
Translates to: EKPSKMNATNVE*FCWGLCRVDPS
Trigger: GGATGGATCCACCCTACAAAGTCCCCAACAGAACCACTCCACATTTGTAGCATTCATCTTACTTGGCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000053050.2
ENSMUST00000216772.2
CDS CAA 90 bp CCCTATATGAACAGGAACTCCACTTATCCAACAGCCAGCTGCCAGTaGTATACAGAGACTATTGTTCATAATGAGAGGATAGAGCAATGG +
Preference number: 6 (lower is better)
Translates to: PYMNRNSTYPTASCQ*YTETIVHNERIEQW
Trigger: CCATTGCTCTATCCTCTCATTATGAACAATAGTCTCTGTATACAACTGGCAGCTGGCTGTTGGATAAGTGGAGTTCCTGTTCATATAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053050.2
ENSMUST00000216772.2
CDS TCA 72 bp GGCTCTCCCAGTTGCAGATGGAAGCTTCAGAATGCTTaGGATTATTTTCACATAAGATGCAAGGATCAGCAT +
Preference number: 6 (lower is better)
Translates to: GSPSCRWKLQNA*DYFHIRCKDQH
Trigger: ATGCTGATCCTTGCATCTTATGTGAAAATAATCTCAAGCATTCTGAAGCTTCCATCTGCAACTGGGAGAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053050.2
ENSMUST00000216772.2
CDS CAA 72 bp TGGCTCTCCCAGTTGCAGATGGAAGCTTCAGAATGCTaGAGATTATTTTCACATAAGATGCAAGGATCAGCA +
Preference number: 6 (lower is better)
Translates to: WLSQLQMEASEC*RLFSHKMQGSA
Trigger: TGCTGATCCTTGCATCTTATGTGAAAATAATCTCAAGCATTCTGAAGCTTCCATCTGCAACTGGGAGAGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000053050.2
ENSMUST00000216772.2
CDS CAA 72 bp AACAGGAACTCCACTTATCCAACAGCCAGCTGCCAGTaGTATACAGAGACTATTGTTCATAATGAGAGGATA +
Preference number: 6 (lower is better)
Translates to: NRNSTYPTASCQ*YTETIVHNERI
Trigger: TATCCTCTCATTATGAACAATAGTCTCTGTATACAACTGGCAGCTGGCTGTTGGATAAGTGGAGTTCCTGTT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053050.2
ENSMUST00000216772.2
CDS GCA 72 bp TATATGAACAGGAACTCCACTTATCCAACAGCCAGCTaGCAGTTGTATACAGAGACTATTGTTCATAATGAG +
Preference number: 6 (lower is better)
Translates to: YMNRNSTYPTAS*QLYTETIVHNE
Trigger: CTCATTATGAACAATAGTCTCTGTATACAACTGGCAGCTGGCTGTTGGATAAGTGGAGTTCCTGTTCATATA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000053050.2
ENSMUST00000216772.2