Pregenerated sensors for OLFR1106 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075164Ensembl transcript IDs: ENSMUST00000099867.2, ENSMUST00000213781.2, ENSMUST00000217650.2
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TACCAGCTCAGGGATGGCACCACCCACAGTGGGCCCTCCCACCCTTaGTTACTAATTGAGAAAATGCCTTACAGCTGGATCTCATGGAGG | + |
|
Preference number: 1 (lower is better) Translates to: YQLRDGTTHSGPSHP*LLIEKMPYSWISWR Trigger: CCTCCATGAGATCCAGCTGTAAGGCATTTTCTCAATTAGTAATCAAGGGTGGGAGGGCCCACTGTGGGTGGTGCCATCCCTGAGCTGGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213781.2 ENSMUST00000217650.2 |
||
| 3UTR CCA 90 bp | GTCTTCCAGCCTCAAGATCTAGATAAGGGGTATGCCTTTTATTTCTaGATTGTAGTTCATTCCAGATGTAATCAAATTGACCATCTGGAA | + |
|
Preference number: 1 (lower is better) Translates to: VFQPQDLDKGYAFYF*IVVHSRCNQIDHLE Trigger: TTCCAGATGGTCAATTTGATTACATCTGGAATGAACTACAATCCAGAAATAAAAGGCATACCCCTTATCTAGATCTTGAGGCTGGAAGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213781.2 ENSMUST00000217650.2 |
||
| 3UTR CCA 90 bp | TTCTTCCAATGTTCTTATGTAGGTCTCCAGCAGAAGGGGTTGCTCTaGTTAAAGGTGTGTACCAATATGTCTAGATCTAAAACTTTCTTT | + |
|
Preference number: 1 (lower is better) Translates to: FFQCSYVGLQQKGLL*LKVCTNMSRSKTFF Trigger: AAAGAAAGTTTTAGATCTAGACATATTGGTACACACCTTTAACCAGAGCAACCCCTTCTGCTGGAGACCTACATAAGAACATTGGAAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213781.2 ENSMUST00000217650.2 |
||
| 3UTR-3UTR CCA 90 bp | TGCTTCCCCTGGCTTGCTAGCTTGCTTTCTTATAGGACCCAAGATTACCAGCTCTGGCACCACCCACAGTaGGCCCTCCCACCCTTGATT | + |
|
Preference number: 2 (lower is better) Translates to: CFPWLASLLSYRTQDYQLWHHPQ*ALPPLI Trigger: AATCAAGGGTGGGAGGGCCCACTGTGGGTGGTGCCA...GAGCTGGTAATCTTGGGTCCTATAAGAAAGCAAGCTAGCAAGCCAGGGGAAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213781.2 ENSMUST00000217650.2 |
||
| 3UTR-3UTR TCA 90 bp | CTAGCTTGCTTCCCCTGGCTTGCTAGCTTGCTTTCTTATAGGACCCAAGATTACATGGAGGCATTTTCTTaGGGGAGGCTCCTTTCTCTA | + |
|
Preference number: 2 (lower is better) Translates to: LACFPWLASLLSYRTQDYMEAFS*GRLLSL Trigger: TAGAGAAAGGAGCCTCCCTCAAGAAAATGCCTCCAT...GTAATCTTGGGTCCTATAAGAAAGCAAGCTAGCAAGCCAGGGGAAGCAAGCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000213781.2 ENSMUST00000217650.2 |
||
| 3UTR-3UTR CCA 90 bp | CTAGCTTGCTTCCCCTGGCTTGCTAGCTTGCTTTCTTATAGGACCCAAGATTACCTGCAACTAAAGCCATaGGATACTTTGCCTGGACCT | + |
|
Preference number: 2 (lower is better) Translates to: LACFPWLASLLSYRTQDYLQLKP*DTLPGP Trigger: AGGTCCAGGCAAAGTATCCCATGGCTTTAGTTGCAG...GTAATCTTGGGTCCTATAAGAAAGCAAGCTAGCAAGCCAGGGGAAGCAAGCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213781.2 ENSMUST00000217650.2 |
||
| 3UTR-3UTR TCA 90 bp | TGCTTCCCCTGGCTTGCTAGCTTGCTTTCTTATAGGACCCAAGATTACCAGCTCCAAGCAGTAGAAGAGTaGATCTTCTTTCTTCCAATG | + |
|
Preference number: 2 (lower is better) Translates to: CFPWLASLLSYRTQDYQLQAVEE*IFFLPM Trigger: CATTGGAAGAAAGAAGATTCACTCTTCTACTGCTTG...GAGCTGGTAATCTTGGGTCCTATAAGAAAGCAAGCTAGCAAGCCAGGGGAAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213781.2 ENSMUST00000217650.2 |
||
| 3UTR-3UTR CCA 90 bp | TGCTTCCCCTGGCTTGCTAGCTTGCTTTCTTATAGGACCCAAGATTACCAGCTCAAAATGCCTTACAGCTaGATCTCATGGAGGCATTTT | + |
|
Preference number: 2 (lower is better) Translates to: CFPWLASLLSYRTQDYQLKMPYS*ISWRHF Trigger: AAAATGCCTCCATGAGATCCAGCTGTAAGGCATTTT...GAGCTGGTAATCTTGGGTCCTATAAGAAAGCAAGCTAGCAAGCCAGGGGAAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213781.2 ENSMUST00000217650.2 |
||
| 3UTR-3UTR GCA 90 bp | GAGGCTCCTTTCTCTATGATAACTCCAGCTTTTGTCAAGTTGACACACAAAACCTTGAACTCAGAGATCTaGTTTTCTGTCTCCTGCAAC | + |
|
Preference number: 2 (lower is better) Translates to: EAPFSMITPAFVKLTHKTLNSEI*FSVSCN Trigger: GTTGCAGGAGACAGAAAAGCAGATCTCTGAGTTCAA...GGTTTTGTGTGTCAACTTGACAAAAGCTGGAGTTATCATAGAGAAAGGAGCCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000213781.2 ENSMUST00000217650.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGAAGCCTGTCTTCCAGCCTCAAGATCTAGATAAGGGGTATGCCTTTTATTTCATCAAATTGACCATCTaGAATAGCGGTCACAAACTC | + |
|
Preference number: 2 (lower is better) Translates to: QKPVFQPQDLDKGYAFYFIKLTI*NSGHKL Trigger: GAGTTTGTGACCGCTATTCCAGATGGTCAATTTGAT...GAAATAAAAGGCATACCCCTTATCTAGATCTTGAGGCTGGAAGACAGGCTTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213781.2 ENSMUST00000217650.2 |
||
| 3UTR-3UTR TCA 90 bp | CTAATTGAGAAAATGCCTTACAGCTGGATCTCATGGAGGCATTTTCTTGAGGGACAAGCAGTAGAAGAGTaGATCTTCTTTCTTCCAATG | + |
|
Preference number: 2 (lower is better) Translates to: LIEKMPYSWISWRHFLEGQAVEE*IFFLPM Trigger: CATTGGAAGAAAGAAGATTCACTCTTCTACTGCTTG...TCCCTCAAGAAAATGCCTCCATGAGATCCAGCTGTAAGGCATTTTCTCAATTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213781.2 ENSMUST00000217650.2 |
||
| 3UTR-3UTR CCA 90 bp | GAGGCTCCTTTCTCTATGATAACTCCAGCTTTTGTCAAGTTGACACACAAAACCGACCTAAGATTTTCATaGTCACTATGCCTCAAGATC | + |
|
Preference number: 2 (lower is better) Translates to: EAPFSMITPAFVKLTHKTDLRFS*SLCLKI Trigger: GATCTTGAGGCATAGTGACCATGAAAATCTTAGGTC...GGTTTTGTGTGTCAACTTGACAAAAGCTGGAGTTATCATAGAGAAAGGAGCCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000213781.2 ENSMUST00000217650.2 |
||
| 3UTR CAA 90 bp | TCTTCTTTCTTCCAATGTTCTTATGTAGGTCTCCAGCAGAAGGGGTaGCTCTGGTTAAAGGTGTGTACCAATATGTCTAGATCTAAAACT | + |
|
Preference number: 2 (lower is better) Translates to: SSFFQCSYVGLQQKG*LWLKVCTNMSRSKT Trigger: AGTTTTAGATCTAGACATATTGGTACACACCTTTAACCAGAGCAACCCCTTCTGCTGGAGACCTACATAAGAACATTGGAAGAAAGAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213781.2 ENSMUST00000217650.2 |
||
| 3UTR-3UTR CCA 90 bp | CCAACAGATGTGCTGGTAATAAGTGCAAGCAGTAGAAGAGTGAATCTTCTTTCTGACCTAAGATTTTCATaGTCACTATGCCTCAAGATC | + |
|
Preference number: 2 (lower is better) Translates to: PTDVLVISASSRRVNLLSDLRFS*SLCLKI Trigger: GATCTTGAGGCATAGTGACCATGAAAATCTTAGGTC...AGAAAGAAGATTCACTCTTCTACTGCTTGCACTTATTACCAGCACATCTGTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213781.2 ENSMUST00000217650.2 |
||
| 3UTR-3UTR CCA 90 bp | CACCTGTCCTACAGAAGAATGTCTCTCTATATTAAGGAAATTTACTGTAATGGCATCAAATTGACCATCTaGAATAGCGGTCACAAACTC | + |
|
Preference number: 2 (lower is better) Translates to: HLSYRRMSLYIKEIYCNGIKLTI*NSGHKL Trigger: GAGTTTGTGACCGCTATTCCAGATGGTCAATTTGAT...GCCATTACAGTAAATTTCCTTAATATAGAGAGACATTCTTCTGTAGGACAGGTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213781.2 ENSMUST00000217650.2 |
||
| 3UTR-3UTR GCA 90 bp | ACCTGTCCTACAGAAGAATGTCTCTCTATATTAAGGAAATTTACTGTAATGGCTTTTTCATGGTCACTATaGCTCAAGATCTTCATGTCA | + |
|
Preference number: 2 (lower is better) Translates to: TCPTEECLSILRKFTVMAFSWSL*LKIFMS Trigger: TGACATGAAGATCTTGAGGCATAGTGACCATGAAAA...AGCCATTACAGTAAATTTCCTTAATATAGAGAGACATTCTTCTGTAGGACAGGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213781.2 ENSMUST00000217650.2 |
||
| 3UTR TCA 72 bp | AGGGATGGCACCACCCACAGTGGGCCCTCCCACCCTTaGTTACTAATTGAGAAAATGCCTTACAGCTGGATC | + |
|
Preference number: 3 (lower is better) Translates to: RDGTTHSGPSHP*LLIEKMPYSWI Trigger: GATCCAGCTGTAAGGCATTTTCTCAATTAGTAATCAAGGGTGGGAGGGCCCACTGTGGGTGGTGCCATCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213781.2 ENSMUST00000217650.2 |
||
| 3UTR TCA 72 bp | CACCCACAGTGGGCCCTCCCACCCTTGATTACTAATTaGGAAAATGCCTTACAGCTGGATCTCATGGAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: HPQWALPPLITN*ENALQLDLMEA Trigger: TGCCTCCATGAGATCCAGCTGTAAGGCATTTTCTCAATTAGTAATCAAGGGTGGGAGGGCCCACTGTGGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213781.2 ENSMUST00000217650.2 |
||
| 3UTR-3UTR CAA 90 bp | CTAGCTTGCTTCCCCTGGCTTGCTAGCTTGCTTTCTTATAGGACCCAAGATTACCATGGAGGCATTTTCTaGAGGGAGGCTCCTTTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: LACFPWLASLLSYRTQDYHGGIF*REAPFS Trigger: AGAGAAAGGAGCCTCCCTCAAGAAAATGCCTCCATG...GTAATCTTGGGTCCTATAAGAAAGCAAGCTAGCAAGCCAGGGGAAGCAAGCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213781.2 ENSMUST00000217650.2 |
||
| 3UTR-3UTR CAA 90 bp | CTAGCTTGCTTCCCCTGGCTTGCTAGCTTGCTTTCTTATAGGACCCAAGATTACCCAGCTTTTGTCAAGTaGACACACAAAACCAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: LACFPWLASLLSYRTQDYPAFVK*THKTSQ Trigger: CTGGCTGGTTTTGTGTGTCAACTTGACAAAAGCTGG...GTAATCTTGGGTCCTATAAGAAAGCAAGCTAGCAAGCCAGGGGAAGCAAGCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000213781.2 ENSMUST00000217650.2 |
||
| 3UTR CCA 72 bp | AGAGATCTGCTTTTCTGTCTCCTGCAACTAAAGCCATaGGATACTTTGCCTGGACCTAAGATTTTCATGGTC | + |
|
Preference number: 3 (lower is better) Translates to: RDLLFCLLQLKP*DTLPGPKIFMV Trigger: GACCATGAAAATCTTAGGTCCAGGCAAAGTATCCCATGGCTTTAGTTGCAGGAGACAGAAAAGCAGATCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213781.2 ENSMUST00000217650.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGGCTCCTTTCTCTATGATAACTCCAGCTTTTGTCAAGTTGACACACAAAACCTGTCCCAGGTTGACTTaGAACTCAGAGATCTGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: EAPFSMITPAFVKLTHKTCPRLT*NSEICF Trigger: AAAGCAGATCTCTGAGTTCAAAGTCAACCTGGGACA...GGTTTTGTGTGTCAACTTGACAAAAGCTGGAGTTATCATAGAGAAAGGAGCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213781.2 ENSMUST00000217650.2 |
||
| 3UTR CCA 72 bp | AGCCATGGGATACTTTGCCTGGACCTAAGATTTTCATaGTCACTATGCCTCAAGATCTTCATGTCAAGATAC | + |
|
Preference number: 3 (lower is better) Translates to: SHGILCLDLRFS*SLCLKIFMSRY Trigger: GTATCTTGACATGAAGATCTTGAGGCATAGTGACCATGAAAATCTTAGGTCCAGGCAAAGTATCCCATGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213781.2 ENSMUST00000217650.2 |
||
| 3UTR-3UTR CAA 90 bp | CTAATTGAGAAAATGCCTTACAGCTGGATCTCATGGAGGCATTTTCTTGAGGGACCAGATGTAATCAAATaGACCATCTGGAATAGCGGT | + |
|
Preference number: 3 (lower is better) Translates to: LIEKMPYSWISWRHFLEGPDVIK*TIWNSG Trigger: ACCGCTATTCCAGATGGTCAATTTGATTACATCTGG...TCCCTCAAGAAAATGCCTCCATGAGATCCAGCTGTAAGGCATTTTCTCAATTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213781.2 ENSMUST00000217650.2 |
||
| 3UTR CCA 72 bp | TGTAGTCTAACTAACCCAACAATGGGCATCTGTGAATaGGAAGTCCAAGAATCTAGTAGTTTCTCATTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: CSLTNPTMGICE*EVQESSSFSFP Trigger: TGGGAATGAGAAACTACTAGATTCTTGGACTTCCCATTCACAGATGCCCATTGTTGGGTTAGTTAGACTACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213781.2 ENSMUST00000217650.2 |
||
| 3UTR CCA 72 bp | TTACTAATTGAGAAAATGCCTTACAGCTGGATCTCATaGAGGCATTTTCTTGAGGGAGGCTCCTTTCTCTAT | + |
|
Preference number: 3 (lower is better) Translates to: LLIEKMPYSWIS*RHFLEGGSFLY Trigger: ATAGAGAAAGGAGCCTCCCTCAAGAAAATGCCTCCATGAGATCCAGCTGTAAGGCATTTTCTCAATTAGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213781.2 ENSMUST00000217650.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGAAGCCTGTCTTCCAGCCTCAAGATCTAGATAAGGGGTATGCCTTTTATTTCGCTGTCCAAAATCATTaGCATAGAATATATCTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: QKPVFQPQDLDKGYAFYFAVQNH*HRIYLS Trigger: GCTCAGATATATTCTATGCAAATGATTTTGGACAGC...GAAATAAAAGGCATACCCCTTATCTAGATCTTGAGGCTGGAAGACAGGCTTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000213781.2 ENSMUST00000217650.2 |
||
| 3UTR GCA 72 bp | ATACTTTGCCTGGACCTAAGATTTTCATGGTCACTATaGCTCAAGATCTTCATGTCAAGATACAGGTCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: ILCLDLRFSWSL*LKIFMSRYRSE Trigger: TTCTGACCTGTATCTTGACATGAAGATCTTGAGGCATAGTGACCATGAAAATCTTAGGTCCAGGCAAAGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213781.2 ENSMUST00000217650.2 |
||
| 3UTR-3UTR CAA 90 bp | CACCTGTCCTACAGAAGAATGTCTCTCTATATTAAGGAAATTTACTGTAATGGCGCTGTCCAAAATCATTaGCATAGAATATATCTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: HLSYRRMSLYIKEIYCNGAVQNH*HRIYLS Trigger: GCTCAGATATATTCTATGCAAATGATTTTGGACAGC...GCCATTACAGTAAATTTCCTTAATATAGAGAGACATTCTTCTGTAGGACAGGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213781.2 ENSMUST00000217650.2 |
||
| 3UTR CCA 72 bp | CCTCAAGATCTAGATAAGGGGTATGCCTTTTATTTCTaGATTGTAGTTCATTCCAGATGTAATCAAATTGAC | + |
|
Preference number: 3 (lower is better) Translates to: PQDLDKGYAFYF*IVVHSRCNQID Trigger: GTCAATTTGATTACATCTGGAATGAACTACAATCCAGAAATAAAAGGCATACCCCTTATCTAGATCTTGAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213781.2 ENSMUST00000217650.2 |
||
| CDS-3UTR TCA 90 bp | GGCATCTGTGAATGGGAAGTCCAAGAATCTAGTAGTTTCTCATTCCCACTAGGTGTGTCTGCCTGCCGCTaGACGGATCCTCAGAATAGC | + |
|
Preference number: 4 (lower is better) Translates to: GICEWEVQESSSFSFPLGVSACR*TDPQNS Trigger: GCTATTCTGAGGATCCGTTCAGCGGCAGGCAGACAC...ACCTAGTGGGAATGAGAAACTACTAGATTCTTGGACTTCCCATTCACAGATGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213781.2 ENSMUST00000217650.2 |
||
| CDS-3UTR TCA 90 bp | TGCTTCCCCTGGCTTGCTAGCTTGCTTTCTTATAGGACCCAAGATTACCAGCTCACAGGCATCAACAAATaGCAGAGAACGAAGGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: CFPWLASLLSYRTQDYQLTGINK*QRTKEV Trigger: CACTTCCTTCGTTCTCTGTCATTTGTTGATGCCTGT...GAGCTGGTAATCTTGGGTCCTATAAGAAAGCAAGCTAGCAAGCCAGGGGAAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213781.2 ENSMUST00000217650.2 |
||
| CDS-3UTR TCA 90 bp | CTAGCTTGCTTCCCCTGGCTTGCTAGCTTGCTTTCTTATAGGACCCAAGATTACGATGCATGCAGAAAATaGGATGGTCTCTCTTTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LACFPWLASLLSYRTQDYDACRK*DGLSFN Trigger: GTTGAAAGAGAGACCATCTCATTTTCTGCATGCATC...GTAATCTTGGGTCCTATAAGAAAGCAAGCTAGCAAGCCAGGGGAAGCAAGCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213781.2 ENSMUST00000217650.2 |
||
| 3UTR CAA 72 bp | AAATGCCTTACAGCTGGATCTCATGGAGGCATTTTCTaGAGGGAGGCTCCTTTCTCTATGATAACTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KCLTAGSHGGIF*REAPFSMITPA Trigger: AGCTGGAGTTATCATAGAGAAAGGAGCCTCCCTCAAGAAAATGCCTCCATGAGATCCAGCTGTAAGGCATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213781.2 ENSMUST00000217650.2 |
||
| 3UTR CAA 72 bp | CTTTTCTGTCTCCTGCAACTAAAGCCATGGGATACTTaGCCTGGACCTAAGATTTTCATGGTCACTATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LFCLLQLKPWDT*PGPKIFMVTMP Trigger: AGGCATAGTGACCATGAAAATCTTAGGTCCAGGCAAAGTATCCCATGGCTTTAGTTGCAGGAGACAGAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213781.2 ENSMUST00000217650.2 |
||
| CDS-3UTR GCA 90 bp | TGCTTCCCCTGGCTTGCTAGCTTGCTTTCTTATAGGACCCAAGATTACCAGCTCAAAAATATTGCAGGATaGATGCAGAAAATGAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: CFPWLASLLSYRTQDYQLKNIAG*MQKMRW Trigger: CCATCTCATTTTCTGCATGCATCCTGCAATATTTTT...GAGCTGGTAATCTTGGGTCCTATAAGAAAGCAAGCTAGCAAGCCAGGGGAAGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000213781.2 ENSMUST00000217650.2 |
||
| CDS-3UTR GCA 90 bp | TGGTTAAAGGTGTGTACCAATATGTCTAGATCTAAAACTTTCTTTGTCCCAGGTACGGTCAAAAGCCATTaGAGCCAGCAGAAAGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: WLKVCTNMSRSKTFFVPGTVKSH*SQQKAL Trigger: GAGGGCTTTCTGCTGGCTGCAATGGCTTTTGACCGT...ACCTGGGACAAAGAAAGTTTTAGATCTAGACATATTGGTACACACCTTTAACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213781.2 ENSMUST00000217650.2 |
||
| CDS-3UTR GCA 90 bp | CACCTGTCCTACAGAAGAATGTCTCTCTATATTAAGGAAATTTACTGTAATGGCACGGTCAAAAGCCATTaGAGCCAGCAGAAAGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: HLSYRRMSLYIKEIYCNGTVKSH*SQQKAL Trigger: GAGGGCTTTCTGCTGGCTGCAATGGCTTTTGACCGT...GCCATTACAGTAAATTTCCTTAATATAGAGAGACATTCTTCTGTAGGACAGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213781.2 ENSMUST00000217650.2 |
||
| 3UTR CAA 72 bp | TTCCAATGTTCTTATGTAGGTCTCCAGCAGAAGGGGTaGCTCTGGTTAAAGGTGTGTACCAATATGTCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: FQCSYVGLQQKG*LWLKVCTNMSR Trigger: TCTAGACATATTGGTACACACCTTTAACCAGAGCAACCCCTTCTGCTGGAGACCTACATAAGAACATTGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213781.2 ENSMUST00000217650.2 |
||
| CDS-3UTR TCA 90 bp | CTAATTGAGAAAATGCCTTACAGCTGGATCTCATGGAGGCATTTTCTTGAGGGAGATGCATGCAGAAAATaGGATGGTCTCTCTTTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LIEKMPYSWISWRHFLEGDACRK*DGLSFN Trigger: GTTGAAAGAGAGACCATCTCATTTTCTGCATGCATC...TCCCTCAAGAAAATGCCTCCATGAGATCCAGCTGTAAGGCATTTTCTCAATTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000213781.2 ENSMUST00000217650.2 |
||
| CDS-3UTR TCA 90 bp | GGTGTCTTCACACCAAGAAAGAAATTCATACTAATCCATTTACTGGATATGCCAACAGGCATCAACAAATaGCAGAGAACGAAGGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GVFTPRKKFILIHLLDMPTGINK*QRTKEV Trigger: CACTTCCTTCGTTCTCTGTCATTTGTTGATGCCTGT...TGGCATATCCAGTAAATGGATTAGTATGAATTTCTTTCTTGGTGTGAAGACACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213781.2 ENSMUST00000217650.2 |
||
| CDS-3UTR CCA 90 bp | GGCATCTGTGAATGGGAAGTCCAAGAATCTAGTAGTTTCTCATTCCCACTAGGTAGTTTAGGAGTTATGTaGATTAGCATAAACATTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GICEWEVQESSSFSFPLGSLGVM*ISINIP Trigger: GGGAATGTTTATGCTAATCCACATAACTCCTAAACT...ACCTAGTGGGAATGAGAAACTACTAGATTCTTGGACTTCCCATTCACAGATGCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213781.2 ENSMUST00000217650.2 |
||
| CDS-3UTR CCA 90 bp | CACCTGTCCTACAGAAGAATGTCTCTCTATATTAAGGAAATTTACTGTAATGGCAGTTCAGTAGCAATGTaGGTGCAAATACTGATGAAT | + |
|
Preference number: 4 (lower is better) Translates to: HLSYRRMSLYIKEIYCNGSSVAM*VQILMN Trigger: ATTCATCAGTATTTGCACCCACATTGCTACTGAACT...GCCATTACAGTAAATTTCCTTAATATAGAGAGACATTCTTCTGTAGGACAGGTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213781.2 ENSMUST00000217650.2 |
||
| CDS-3UTR CCA 90 bp | GGTGTCTTCACACCAAGAAAGAAATTCATACTAATCCATTTACTGGATATGCCAAGTTCAGTAGCAATGTaGGTGCAAATACTGATGAAT | + |
|
Preference number: 4 (lower is better) Translates to: GVFTPRKKFILIHLLDMPSSVAM*VQILMN Trigger: ATTCATCAGTATTTGCACCCACATTGCTACTGAACT...TGGCATATCCAGTAAATGGATTAGTATGAATTTCTTTCTTGGTGTGAAGACACC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213781.2 ENSMUST00000217650.2 |
||
| CDS-3UTR CCA 90 bp | ACCTGTCCTACAGAAGAATGTCTCTCTATATTAAGGAAATTTACTGTAATGGCTTTAGTGGGTTTACAATaGCCACATAACGGTCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TCPTEECLSILRKFTVMALVGLQ*PHNGQK Trigger: CTTTTGACCGTTATGTGGCCATTGTAAACCCACTAA...AGCCATTACAGTAAATTTCCTTAATATAGAGAGACATTCTTCTGTAGGACAGGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213781.2 ENSMUST00000217650.2 |
||
| CDS-3UTR CCA 90 bp | TGGTTAAAGGTGTGTACCAATATGTCTAGATCTAAAACTTTCTTTGTCCCAGGTAGTTTAGGAGTTATGTaGATTAGCATAAACATTCCC | + |
|
Preference number: 4 (lower is better) Translates to: WLKVCTNMSRSKTFFVPGSLGVM*ISINIP Trigger: GGGAATGTTTATGCTAATCCACATAACTCCTAAACT...ACCTGGGACAAAGAAAGTTTTAGATCTAGACATATTGGTACACACCTTTAACCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213781.2 ENSMUST00000217650.2 |
||
| CDS-3UTR CAA 90 bp | CTAATTGAGAAAATGCCTTACAGCTGGATCTCATGGAGGCATTTTCTTGAGGGACAGGTAGAGAAGGCTTaGTGTCTGCCTGCCGCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: LIEKMPYSWISWRHFLEGQVEKA*CLPAAE Trigger: TTCAGCGGCAGGCAGACACAAAGCCTTCTCTACCTG...TCCCTCAAGAAAATGCCTCCATGAGATCCAGCTGTAAGGCATTTTCTCAATTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213781.2 ENSMUST00000217650.2 |
||
| CDS-3UTR CAA 90 bp | ACCTGTCCTACAGAAGAATGTCTCTCTATATTAAGGAAATTTACTGTAATGGCTCAGGTAGAGAAGGCTTaGTGTCTGCCTGCCGCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: TCPTEECLSILRKFTVMAQVEKA*CLPAAE Trigger: TTCAGCGGCAGGCAGACACAAAGCCTTCTCTACCTG...AGCCATTACAGTAAATTTCCTTAATATAGAGAGACATTCTTCTGTAGGACAGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213781.2 ENSMUST00000217650.2 |
||
| CDS CCA 90 bp | AAAATGAGATGGTCTCTCTTTCAACAAAGAAGTTCAGTAGCAATGTaGGTGCAAATACTGATGAATAACAGGCATCAACAAATGACAGAG | + |
|
Preference number: 5 (lower is better) Translates to: KMRWSLFQQRSSVAM*VQILMNNRHQQMTE Trigger: CTCTGTCATTTGTTGATGCCTGTTATTCATCAGTATTTGCACCCACATTGCTACTGAACTTCTTTGTTGAAAGAGAGACCATCTCATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099867.2 ENSMUST00000213781.2 ENSMUST00000217650.2 |
||