Pregenerated sensors for OLFR1101 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075167Ensembl transcript IDs: ENSMUST00000099870.2, ENSMUST00000214411.3
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGTAGAATCAGTGGGCCGTGTTCTGCTAGAGTCCTTTATCTCTTCTaGCTCCTACATTCTTTCCTGTTCCTCCTCCCTGGGGTTCCCCAG | + |
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Preference number: 1 (lower is better) Translates to: SRISGPCSARVLYLF*LLHSFLFLLPGVPQ Trigger: CTGGGGAACCCCAGGGAGGAGGAACAGGAAAGAATGTAGGAGTCAGAAGAGATAAAGGACTCTAGCAGAACACGGCCCACTGATTCTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214411.3 |
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| 3UTR TCA 90 bp | GGGGGTGAACCAGTAGAGACCTCAAATTTTGACTGTCTCTCCACATaGTGCAGAGGAGCCACTCTAGTAGTGACTGACAAGAAATCAATC | + |
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Preference number: 1 (lower is better) Translates to: GGEPVETSNFDCLST*CRGATLVVTDKKSI Trigger: GATTGATTTCTTGTCAGTCACTACTAGAGTGGCTCCTCTGCATCATGTGGAGAGACAGTCAAAATTTGAGGTCTCTACTGGTTCACCCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214411.3 |
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| 3UTR GCA 90 bp | AAGAAACACCAAGCTAACAACAATAAGATATATGGTGCAGACCCCTaGAGACAGGATACTTTCTGCTTTACCCTCTGTGGGCAAGCCCAT | + |
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Preference number: 1 (lower is better) Translates to: KKHQANNNKIYGADP*RQDTFCFTLCGQAH Trigger: ATGGGCTTGCCCACAGAGGGTAAAGCAGAAAGTATCCTGTCTGCAGGGGTCTGCACCATATATCTTATTGTTGTTAGCTTGGTGTTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214411.3 |
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| 3UTR TCA 90 bp | TACATTTCATGGTGCCCTTTGTCTTACAGAATCTTTTCAGTTTCATaGGGTCACATGTATTATTTGTTGACATTAGTACCTGCTCTTCTG | + |
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Preference number: 1 (lower is better) Translates to: YISWCPLSYRIFSVS*GHMYYLLTLVPALL Trigger: CAGAAGAGCAGGTACTAATGTCAACAAATAATACATGTGACCTCATGAAACTGAAAAGATTCTGTAAGACAAAGGGCACCATGAAATGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214411.3 |
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| 3UTR-3UTR GCA 90 bp | GATATATGGTGCAGACCCCTGCAGACAGGATACTTTCTGCTTTACCCTCTGTGGCTTGCCATCCAGGCATaGACTTTCTCTTTTGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: DIWCRPLQTGYFLLYPLWLAIQA*TFSFGG Trigger: CCCACCAAAAGAGAAAGTGCATGCCTGGATGGCAAG...CCACAGAGGGTAAAGCAGAAAGTATCCTGTCTGCAGGGGTCTGCACCATATATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214411.3 |
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| 3UTR-3UTR TCA 90 bp | GCAGACAGGATACTTTCTGCTTTACCCTCTGTGGGCAAGCCCATGTTGAGCCTTAGAGACCTCAAATTTTaGCTGTCTCTCCACATGATG | + |
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Preference number: 2 (lower is better) Translates to: ADRILSALPSVGKPMLSLRDLKF*LSLHMM Trigger: CATCATGTGGAGAGACAGTCAAAATTTGAGGTCTCT...AAGGCTCAACATGGGCTTGCCCACAGAGGGTAAAGCAGAAAGTATCCTGTCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214411.3 |
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| 3UTR CAA 90 bp | TATCTTGTCTCCTGTTGCTTGCCATCCAGGCATGCACTTTCTCTTTaGGTGGGCCTCAAGTTAAATCAGACATTGGTTAGCCAAACCCAC | + |
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Preference number: 2 (lower is better) Translates to: YLVSCCLPSRHALSL*VGLKLNQTLVSQTH Trigger: GTGGGTTTGGCTAACCAATGTCTGATTTAACTTGAGGCCCACCAAAAGAGAAAGTGCATGCCTGGATGGCAAGCAACAGGAGACAAGATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214411.3 |
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| 3UTR-3UTR CCA 90 bp | TATCTTGTCTCCTGTTGCTTGCCATCCAGGCATGCACTTTCTCTTTTGGTGGGCGCTTCTTACATTTCATaGTGCCCTTTGTCTTACAGA | + |
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Preference number: 2 (lower is better) Translates to: YLVSCCLPSRHALSLLVGASYIS*CPLSYR Trigger: TCTGTAAGACAAAGGGCACCATGAAATGTAAGAAGC...GCCCACCAAAAGAGAAAGTGCATGCCTGGATGGCAAGCAACAGGAGACAAGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214411.3 |
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| 3UTR-3UTR GCA 90 bp | TTCTGTCATGTCTTAACTTCAGCTCCCCTTTCTACCATTACTCTGAGCTCATATTATGGTGCAGACCCCTaGAGACAGGATACTTTCTGC | + |
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Preference number: 2 (lower is better) Translates to: FCHVLTSAPLSTITLSSYYGADP*RQDTFC Trigger: GCAGAAAGTATCCTGTCTGCAGGGGTCTGCACCATA...ATATGAGCTCAGAGTAATGGTAGAAAGGGGAGCTGAAGTTAAGACATGACAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214411.3 |
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| 3UTR-3UTR CCA 90 bp | CAAGCCCATGTTGAGCCTTGCTTAGTAGAATCAGTGGGCCGTGTTCTGCTAGAGCCAGTTCAATGTGTGTaGTTTTATTTTGAGGTGTTT | + |
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Preference number: 2 (lower is better) Translates to: QAHVEPCLVESVGRVLLEPVQCV*FYFEVF Trigger: AAACACCTCAAAATAAAACCACACACATTGAACTGG...CTCTAGCAGAACACGGCCCACTGATTCTACTAAGCAAGGCTCAACATGGGCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214411.3 |
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| 3UTR-3UTR TCA 90 bp | TTCTGTCATGTCTTAACTTCAGCTCCCCTTTCTACCATTACTCTGAGCTCATATTCTAGTCTAGGTGTCTaGGGTATCTTGTCTCCTGTT | + |
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Preference number: 2 (lower is better) Translates to: FCHVLTSAPLSTITLSSYSSLGV*GILSPV Trigger: AACAGGAGACAAGATACCTCAGACACCTAGACTAGA...ATATGAGCTCAGAGTAATGGTAGAAAGGGGAGCTGAAGTTAAGACATGACAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214411.3 |
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| 3UTR-3UTR TCA 90 bp | AGAATTTTATGTAGCGTGGCCTGTCTTCTGAGGACATTTTACAAAGGCCTTTCTGTGCATGGGTGTATATaGGTGCATGAACTAAACAAG | + |
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Preference number: 2 (lower is better) Translates to: RILCSVACLLRTFYKGLSVHGCI*VHELNK Trigger: CTTGTTTAGTTCATGCACTCATATACACCCATGCAC...AGAAAGGCCTTTGTAAAATGTCCTCAGAAGACAGGCCACGCTACATAAAATTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214411.3 |
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| 3UTR-3UTR CAA 90 bp | TATGGTGCAGACCCCTGCAGACAGGATACTTTCTGCTTTACCCTCTGTGGGCAAGTATCTTGTCTCCTGTaGCTTGCCATCCAGGCATGC | + |
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Preference number: 3 (lower is better) Translates to: YGADPCRQDTFCFTLCGQVSCLL*LAIQAC Trigger: GCATGCCTGGATGGCAAGCAACAGGAGACAAGATAC...TTGCCCACAGAGGGTAAAGCAGAAAGTATCCTGTCTGCAGGGGTCTGCACCATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214411.3 |
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| 3UTR TCA 72 bp | TACTTTCTGCTTTACCCTCTGTGGGCAAGCCCATGTTaGGCCTTGCTTAGTAGAATCAGTGGGCCGTGTTCT | + |
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Preference number: 3 (lower is better) Translates to: YFLLYPLWASPC*ALLSRISGPCS Trigger: AGAACACGGCCCACTGATTCTACTAAGCAAGGCTCAACATGGGCTTGCCCACAGAGGGTAAAGCAGAAAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214411.3 |
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| 3UTR TCA 72 bp | CCAGTAGAGACCTCAAATTTTGACTGTCTCTCCACATaGTGCAGAGGAGCCACTCTAGTAGTGACTGACAAG | + |
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Preference number: 3 (lower is better) Translates to: PVETSNFDCLST*CRGATLVVTDK Trigger: CTTGTCAGTCACTACTAGAGTGGCTCCTCTGCATCATGTGGAGAGACAGTCAAAATTTGAGGTCTCTACTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214411.3 |
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| 3UTR-3UTR CAA 90 bp | TATGGTGCAGACCCCTGCAGACAGGATACTTTCTGCTTTACCCTCTGTGGGCAAGGTCACATGTATTATTaGTTGACATTAGTACCTGCT | + |
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Preference number: 3 (lower is better) Translates to: YGADPCRQDTFCFTLCGQGHMYY*LTLVPA Trigger: AGCAGGTACTAATGTCAACAAATAATACATGTGACC...TTGCCCACAGAGGGTAAAGCAGAAAGTATCCTGTCTGCAGGGGTCTGCACCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214411.3 |
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| 3UTR-3UTR CAA 90 bp | TATGGTGCAGACCCCTGCAGACAGGATACTTTCTGCTTTACCCTCTGTGGGCAAATTTCATGGTGCCCTTaGTCTTACAGAATCTTTTCA | + |
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Preference number: 3 (lower is better) Translates to: YGADPCRQDTFCFTLCGQISWCP*SYRIFS Trigger: TGAAAAGATTCTGTAAGACAAAGGGCACCATGAAAT...TTGCCCACAGAGGGTAAAGCAGAAAGTATCCTGTCTGCAGGGGTCTGCACCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214411.3 |
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| 3UTR GCA 72 bp | CAAGCTAACAACAATAAGATATATGGTGCAGACCCCTaGAGACAGGATACTTTCTGCTTTACCCTCTGTGGG | + |
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Preference number: 3 (lower is better) Translates to: QANNNKIYGADP*RQDTFCFTLCG Trigger: CCCACAGAGGGTAAAGCAGAAAGTATCCTGTCTGCAGGGGTCTGCACCATATATCTTATTGTTGTTAGCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214411.3 |
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| 3UTR-3UTR CAA 90 bp | AGAATTTTATGTAGCGTGGCCTGTCTTCTGAGGACATTTTACAAAGGCCTTTCTCATGCACTTTCTCTTTaGGTGGGCCTCAAGTTAAAT | + |
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Preference number: 3 (lower is better) Translates to: RILCSVACLLRTFYKGLSHALSL*VGLKLN Trigger: ATTTAACTTGAGGCCCACCAAAAGAGAAAGTGCATG...AGAAAGGCCTTTGTAAAATGTCCTCAGAAGACAGGCCACGCTACATAAAATTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214411.3 |
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| 3UTR GCA 72 bp | CTTCTGATATTTGTGTATCCACAATGTTGTCTCCTATaGCAATGGGCATATAACTGTTCCCCCTTTCTCTTA | + |
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Preference number: 3 (lower is better) Translates to: LLIFVYPQCCLL*QWAYNCSPFLL Trigger: TAAGAGAAAGGGGGAACAGTTATATGCCCATTGGCATAGGAGACAACATTGTGGATACACAAATATCAGAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214411.3 |
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| 3UTR CCA 72 bp | AGACTAGAAAGTAAAGACACTGCTTCTTACATTTCATaGTGCCCTTTGTCTTACAGAATCTTTTCAGTTTCA | + |
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Preference number: 3 (lower is better) Translates to: RLESKDTASYIS*CPLSYRIFSVS Trigger: TGAAACTGAAAAGATTCTGTAAGACAAAGGGCACCATGAAATGTAAGAAGCAGTGTCTTTACTTTCTAGTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214411.3 |
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| 3UTR GCA 72 bp | ATGAGGTCACATGTATTATTTGTTGACATTAGTACCTaGTCTTCTGATATTTGTGTATCCACAATGTTGTCT | + |
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Preference number: 3 (lower is better) Translates to: MRSHVLFVDIST*SSDICVSTMLS Trigger: AGACAACATTGTGGATACACAAATATCAGAAGAGCAGGTACTAATGTCAACAAATAATACATGTGACCTCAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214411.3 |
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| CDS-3UTR CCA 90 bp | CAAGCCCATGTTGAGCCTTGCTTAGTAGAATCAGTGGGCCGTGTTCTGCTAGAGGTGACATGTAGACTCTaGGTGACATGTTCACTGCAT | + |
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Preference number: 4 (lower is better) Translates to: QAHVEPCLVESVGRVLLEVTCRL*VTCSLH Trigger: ATGCAGTGAACATGTCACCCAGAGTCTACATGTCAC...CTCTAGCAGAACACGGCCCACTGATTCTACTAAGCAAGGCTCAACATGGGCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214411.3 |
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| CDS-3UTR TCA 90 bp | TATCTTGTCTCCTGTTGCTTGCCATCCAGGCATGCACTTTCTCTTTTGGTGGGCATCCCCAATGACTACTaGGATCAGTCCTATGTTTCC | + |
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Preference number: 4 (lower is better) Translates to: YLVSCCLPSRHALSLLVGIPNDY*DQSYVS Trigger: GGAAACATAGGACTGATCTCAGTAGTCATTGGGGAT...GCCCACCAAAAGAGAAAGTGCATGCCTGGATGGCAAGCAACAGGAGACAAGATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214411.3 |
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| CDS-3UTR CCA 90 bp | GCAGACAGGATACTTTCTGCTTTACCCTCTGTGGGCAAGCCCATGTTGAGCCTTGCAGTGGCTGCTGTATaGATAGATGCATGCAAAATA | + |
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Preference number: 4 (lower is better) Translates to: ADRILSALPSVGKPMLSLAVAAV*IDACKI Trigger: TATTTTGCATGCATCTATCCATACAGCAGCCACTGC...AAGGCTCAACATGGGCTTGCCCACAGAGGGTAAAGCAGAAAGTATCCTGTCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214411.3 |
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| CDS-3UTR TCA 90 bp | TCAGTGGGCCGTGTTCTGCTAGAGTCCTTTATCTCTTCTGACTCCTACATTCTTGCTGAGAATCCCCAATaGCTACTGAGATCAGTCCTA | + |
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Preference number: 4 (lower is better) Translates to: SVGRVLLESFISSDSYILAENPQ*LLRSVL Trigger: TAGGACTGATCTCAGTAGTCATTGGGGATTCTCAGC...AAGAATGTAGGAGTCAGAAGAGATAAAGGACTCTAGCAGAACACGGCCCACTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214411.3 |
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| 3UTR CAA 72 bp | TCCTGTTGCTTGCCATCCAGGCATGCACTTTCTCTTTaGGTGGGCCTCAAGTTAAATCAGACATTGGTTAGC | + |
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Preference number: 4 (lower is better) Translates to: SCCLPSRHALSL*VGLKLNQTLVS Trigger: GCTAACCAATGTCTGATTTAACTTGAGGCCCACCAAAAGAGAAAGTGCATGCCTGGATGGCAAGCAACAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214411.3 |
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| CDS-3UTR CCA 90 bp | TTATCTCTTCTGACTCCTACATTCTTTCCTGTTCCTCCTCCCTGGGGTTCCCCAGCTCTAATGTGTAGCTaGAACTTGGTCTCATATACA | + |
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Preference number: 4 (lower is better) Translates to: LSLLTPTFFPVPPPWGSPALMCS*NLVSYT Trigger: TGTATATGAGACCAAGTTCCAGCTACACATTAGAGC...TGGGGAACCCCAGGGAGGAGGAACAGGAAAGAATGTAGGAGTCAGAAGAGATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214411.3 |
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| CDS-3UTR GCA 90 bp | GGTATCTTGTCTCCTGTTGCTTGCCATCCAGGCATGCACTTTCTCTTTTGGTGGGTATGGATAGATGCATaGAAAATACCACCAACATTG | + |
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Preference number: 4 (lower is better) Translates to: GILSPVACHPGMHFLFWWVWIDA*KIPPTL Trigger: CAATGTTGGTGGTATTTTGCATGCATCTATCCATAC...CCACCAAAAGAGAAAGTGCATGCCTGGATGGCAAGCAACAGGAGACAAGATACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214411.3 |
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| 3UTR CAA 72 bp | GCCCCACCACACCTTCTAGCTAGGAGAGATTATAGGTaGAAAGTTATATTACTGGGATTGTGTCTAGGTTTC | + |
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Preference number: 4 (lower is better) Translates to: APPHLLARRDYR*KVILLGLCLGF Trigger: GAAACCTAGACACAATCCCAGTAATATAACTTTCAACCTATAATCTCTCCTAGCTAGAAGGTGTGGTGGGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214411.3 |
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| 3UTR CAA 72 bp | CTTTCTCTTTTGGTGGGCCTCAAGTTAAATCAGACATaGGTTAGCCAAACCCACAATTCTGTGCCAAAATTG | + |
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Preference number: 4 (lower is better) Translates to: LSLLVGLKLNQT*VSQTHNSVPKL Trigger: CAATTTTGGCACAGAATTGTGGGTTTGGCTAACCAATGTCTGATTTAACTTGAGGCCCACCAAAAGAGAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214411.3 |
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| 3UTR CAA 72 bp | GATCAGGCTAAAAAGGCAAAGACACTCCTCCTTCTGTaGTTAAGAGTCTCAAAGAAACACCAAGCTAACAAC | + |
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Preference number: 4 (lower is better) Translates to: DQAKKAKTLLLL*LRVSKKHQANN Trigger: GTTGTTAGCTTGGTGTTTCTTTGAGACTCTTAACAACAGAAGGAGGAGTGTCTTTGCCTTTTTAGCCTGATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214411.3 |
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| CDS-3UTR GCA 90 bp | TTCTCAAGCATATTATTTTGTGTAGAAGCACAGACTTTGGTCTCCCTTGAACATTGCTGTATGGATAGATaGATGCAAAATACCACCAAC | + |
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Preference number: 4 (lower is better) Translates to: FSSILFCVEAQTLVSLEHCCMDR*MQNTTN Trigger: GTTGGTGGTATTTTGCATGCATCTATCCATACAGCA...ATGTTCAAGGGAGACCAAAGTCTGTGCTTCTACACAAAATAATATGCTTGAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214411.3 |
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| 3UTR CAA 72 bp | AAATACTCAGATGAAATCAACTCACAACACATAATTTaGCATGTCCAGTCTGTAAAAGACTGTCGGACATAT | + |
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Preference number: 4 (lower is better) Translates to: KYSDEINSQHII*HVQSVKDCRTY Trigger: ATATGTCCGACAGTCTTTTACAGACTGGACATGCAAAATTATGTGTTGTGAGTTGATTTCATCTGAGTATTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214411.3 |
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| CDS-3UTR CAA 90 bp | TCAGTGGGCCGTGTTCTGCTAGAGTCCTTTATCTCTTCTGACTCCTACATTCTTTGTAGAGAACACTTTTaGCCTCCCCTCAGCAGAATG | + |
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Preference number: 5 (lower is better) Translates to: SVGRVLLESFISSDSYILCREHF*PPLSRM Trigger: CATTCTGCTGAGGGGAGGCAAAAAGTGTTCTCTACA...AAGAATGTAGGAGTCAGAAGAGATAAAGGACTCTAGCAGAACACGGCCCACTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214411.3 |
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| CDS GCA 90 bp | ATGCTTAATTTCATTAGAGTCACAAAACGACAAGCTAGCAGTGGCTaGTGTATGGATAGATGCATGCAAAATACCACCAACATTGGAGGC | + |
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Preference number: 5 (lower is better) Translates to: MLNFIRVTKRQASSG*CMDRCMQNTTNIGG Trigger: GCCTCCAATGTTGGTGGTATTTTGCATGCATCTATCCATACAGCAGCCACTGCTAGCTTGTCGTTTTGTGACTCTAATGAAATTAAGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099870.2 ENSMUST00000214411.3 |
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| CDS CCA 90 bp | ATTTCATTAGAGTCACAAAACGACAAGCTAGCAGTGGCTGCTGTATaGATAGATGCATGCAAAATACCACCAACATTGGAGGCAATGATG | + |
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Preference number: 5 (lower is better) Translates to: ISLESQNDKLAVAAV*IDACKIPPTLEAMM Trigger: CATCATTGCCTCCAATGTTGGTGGTATTTTGCATGCATCTATCCATACAGCAGCCACTGCTAGCTTGTCGTTTTGTGACTCTAATGAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099870.2 ENSMUST00000214411.3 |
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| CDS-3UTR CAA 90 bp | ACATTAGTACCTGCTCTTCTGATATTTGTGTATCCACAATGTTGTCTCCTATGCAAAATACCACCAACATaGGAGGCAATGATGAGTGAC | + |
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Preference number: 5 (lower is better) Translates to: TLVPALLIFVYPQCCLLCKIPPT*EAMMSD Trigger: GTCACTCATCATTGCCTCCAATGTTGGTGGTATTTT...GCATAGGAGACAACATTGTGGATACACAAATATCAGAAGAGCAGGTACTAATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214411.3 |
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| CDS GCA 72 bp | GACAAGCTAGCAGTGGCTGCTGTATGGATAGATGCATaGAAAATACCACCAACATTGGAGGCAATGATGAGT | + |
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Preference number: 6 (lower is better) Translates to: DKLAVAAVWIDA*KIPPTLEAMMS Trigger: ACTCATCATTGCCTCCAATGTTGGTGGTATTTTGCATGCATCTATCCATACAGCAGCCACTGCTAGCTTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099870.2 ENSMUST00000214411.3 |
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| CDS GCA 72 bp | AAACGACAAGCTAGCAGTGGCTGCTGTATGGATAGATaGATGCAAAATACCACCAACATTGGAGGCAATGAT | + |
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Preference number: 6 (lower is better) Translates to: KRQASSGCCMDR*MQNTTNIGGND Trigger: ATCATTGCCTCCAATGTTGGTGGTATTTTGCATGCATCTATCCATACAGCAGCCACTGCTAGCTTGTCGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099870.2 ENSMUST00000214411.3 |
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| CDS GCA 72 bp | TTCATTAGAGTCACAAAACGACAAGCTAGCAGTGGCTaGTGTATGGATAGATGCATGCAAAATACCACCAAC | + |
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Preference number: 6 (lower is better) Translates to: FIRVTKRQASSG*CMDRCMQNTTN Trigger: GTTGGTGGTATTTTGCATGCATCTATCCATACAGCAGCCACTGCTAGCTTGTCGTTTTGTGACTCTAATGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099870.2 ENSMUST00000214411.3 |
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