Pregenerated sensors for OLFR1100 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070875Ensembl transcript IDs: ENSMUST00000094913.6, ENSMUST00000117211.3
Found 18 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCTTTATTTAGTAATATACTAAGCCGGTCATCCTATGTTCCCAGTTaGGCTCTCTTTCCATGGAGCAGCTTTCAGTTTCATTTTTCCAGT | + |
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Preference number: 1 (lower is better) Translates to: SLFSNILSRSSYVPS*ALFPWSSFQFHFSS Trigger: ACTGGAAAAATGAAACTGAAAGCTGCTCCATGGAAAGAGAGCTCAACTGGGAACATAGGATGACCGGCTTAGTATATTACTAAATAAAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117211.3 |
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| 3UTR-3UTR TCA 90 bp | TGTTTTTACATGTGTAACACAGACATGTTTCCACCATTATTGATTCAGTACAGCCAAAGTCAACTTCAGTaGTCACAAACAACACATGCC | + |
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Preference number: 2 (lower is better) Translates to: CFYMCNTDMFPPLLIQYSQSQLQ*SQTTHA Trigger: GGCATGTGTTGTTTGTGATCACTGAAGTTGACTTTG...GCTGTACTGAATCAATAATGGTGGAAACATGTCTGTGTTACACATGTAAAAACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117211.3 |
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| 3UTR TCA 72 bp | AGTAATATACTAAGCCGGTCATCCTATGTTCCCAGTTaGGCTCTCTTTCCATGGAGCAGCTTTCAGTTTCAT | + |
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Preference number: 3 (lower is better) Translates to: SNILSRSSYVPS*ALFPWSSFQFH Trigger: ATGAAACTGAAAGCTGCTCCATGGAAAGAGAGCTCAACTGGGAACATAGGATGACCGGCTTAGTATATTACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117211.3 |
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| 3UTR-3UTR CAA 90 bp | AATACCTCTTACAAAGTCAACTTCAGTGATCACAAACAACACATGCCAATTTACGAGATAGAAATCATGTaGCCTGGTACATTTAGAGTG | + |
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Preference number: 3 (lower is better) Translates to: NTSYKVNFSDHKQHMPIYEIEIM*PGTFRV Trigger: CACTCTAAATGTACCAGGCAACATGATTTCTATCTC...GTAAATTGGCATGTGTTGTTTGTGATCACTGAAGTTGACTTTGTAAGAGGTATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117211.3 |
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| 3UTR-3UTR CAA 90 bp | TGTTTTTACATGTGTAACACAGACATGTTTCCACCATTATTGATTCAGTACAGCGCTTTGGCAGATACTTaGAAACAAACATCCATGACT | + |
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Preference number: 3 (lower is better) Translates to: CFYMCNTDMFPPLLIQYSALADT*KQTSMT Trigger: AGTCATGGATGTTTGTTTCAAAGTATCTGCCAAAGC...GCTGTACTGAATCAATAATGGTGGAAACATGTCTGTGTTACACATGTAAAAACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117211.3 |
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| 3UTR-3UTR CAA 90 bp | TGTTTTTACATGTGTAACACAGACATGTTTCCACCATTATTGATTCAGTACAGCAGCTTATTCCAAATTTaGCTGTACATTCCGGAGAAT | + |
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Preference number: 3 (lower is better) Translates to: CFYMCNTDMFPPLLIQYSSLFQI*LYIPEN Trigger: ATTCTCCGGAATGTACAGCAAAATTTGGAATAAGCT...GCTGTACTGAATCAATAATGGTGGAAACATGTCTGTGTTACACATGTAAAAACA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117211.3 |
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| 3UTR TCA 72 bp | GCAGATACTTTGAAACAAACATCCATGACTCTGAAATaGAATAGGGCAATACCTCTTACAAAGTCAACTTCA | + |
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Preference number: 3 (lower is better) Translates to: ADTLKQTSMTLK*NRAIPLTKSTS Trigger: TGAAGTTGACTTTGTAAGAGGTATTGCCCTATTTCATTTCAGAGTCATGGATGTTTGTTTCAAAGTATCTGC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117211.3 |
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| CDS-3UTR TCA 90 bp | ACTAAGCCGGTCATCCTATGTTCCCAGTTGAGCTCTCTTTCCATGGAGCAGCTTTACCATAAAAGACAGTaGCTCCTAGGAGATGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: TKPVILCSQLSSLSMEQLYHKRQ*LLGDEK Trigger: CTTCTCATCTCCTAGGAGTCACTGTCTTTTATGGTA...AAGCTGCTCCATGGAAAGAGAGCTCAACTGGGAACATAGGATGACCGGCTTAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117211.3 |
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| CDS-3UTR GCA 90 bp | ACTAAGCCGGTCATCCTATGTTCCCAGTTGAGCTCTCTTTCCATGGAGCAGCTTTGTTACGTGTATCACTaGAAGACAGTGCTAAAATTG | + |
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Preference number: 4 (lower is better) Translates to: TKPVILCSQLSSLSMEQLCYVYH*KTVLKL Trigger: CAATTTTAGCACTGTCTTGCAGTGATACACGTAACA...AAGCTGCTCCATGGAAAGAGAGCTCAACTGGGAACATAGGATGACCGGCTTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117211.3 |
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| CDS-3UTR GCA 90 bp | ACTAAGCCGGTCATCCTATGTTCCCAGTTGAGCTCTCTTTCCATGGAGCAGCTTAGTCTTGAGCCTTTCTaGTTTTTGATAACTCTATGG | + |
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Preference number: 4 (lower is better) Translates to: TKPVILCSQLSSLSMEQLSLEPF*FLITLW Trigger: CCATAGAGTTATCAAAAAGCAGAAAGGCTCAAGACT...AAGCTGCTCCATGGAAAGAGAGCTCAACTGGGAACATAGGATGACCGGCTTAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117211.3 |
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| CDS-3UTR GCA 90 bp | ACTAAGCCGGTCATCCTATGTTCCCAGTTGAGCTCTCTTTCCATGGAGCAGCTTGAATTACCTTGGTTCTaGAGAAATATAAGGTGTTCA | + |
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Preference number: 4 (lower is better) Translates to: TKPVILCSQLSSLSMEQLELPWF*RNIRCS Trigger: TGAACACCTTATATTTCTGCAGAACCAAGGTAATTC...AAGCTGCTCCATGGAAAGAGAGCTCAACTGGGAACATAGGATGACCGGCTTAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117211.3 |
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| CDS-3UTR TCA 90 bp | TGTTTTTACATGTGTAACACAGACATGTTTCCACCATTATTGATTCAGTACAGCAGGTGTGATGACAGTTaGGTAACTGAGATCGAGGAA | + |
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Preference number: 4 (lower is better) Translates to: CFYMCNTDMFPPLLIQYSRCDDS*VTEIEE Trigger: TTCCTCGATCTCAGTTACTCAACTGTCATCACACCT...GCTGTACTGAATCAATAATGGTGGAAACATGTCTGTGTTACACATGTAAAAACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117211.3 |
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| CDS-3UTR TCA 90 bp | TGTTTTTACATGTGTAACACAGACATGTTTCCACCATTATTGATTCAGTACAGCTCATATAGGAACCAGTaGGAAGGGTACTACAGAATC | + |
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Preference number: 4 (lower is better) Translates to: CFYMCNTDMFPPLLIQYSSYRNQ*EGYYRI Trigger: GATTCTGTAGTACCCTTCTCACTGGTTCCTATATGA...GCTGTACTGAATCAATAATGGTGGAAACATGTCTGTGTTACACATGTAAAAACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117211.3 |
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| CDS-3UTR TCA 90 bp | TGTTTTTACATGTGTAACACAGACATGTTTCCACCATTATTGATTCAGTACAGCGGCTTTGTGCTTTCCTaGAGTGGAATTGATTTTCAA | + |
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Preference number: 4 (lower is better) Translates to: CFYMCNTDMFPPLLIQYSGFVLS*SGIDFQ Trigger: TTGAAAATCAATTCCACTTCAGGAAAGCACAAAGCC...GCTGTACTGAATCAATAATGGTGGAAACATGTCTGTGTTACACATGTAAAAACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117211.3 |
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| CDS-3UTR CCA 90 bp | AATACCTCTTACAAAGTCAACTTCAGTGATCACAAACAACACATGCCAATTTACAGTGATGAATTACCTTaGTTCTGCAGAAATATAAGG | + |
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Preference number: 4 (lower is better) Translates to: NTSYKVNFSDHKQHMPIYSDELP*FCRNIR Trigger: CCTTATATTTCTGCAGAACCAAGGTAATTCATCACT...GTAAATTGGCATGTGTTGTTTGTGATCACTGAAGTTGACTTTGTAAGAGGTATT 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117211.3 |
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| CDS-3UTR CAA 90 bp | TGTTTTTACATGTGTAACACAGACATGTTTCCACCATTATTGATTCAGTACAGCGAGCCTTTCTGCTTTTaGATAACTCTATGGATAGCA | + |
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Preference number: 5 (lower is better) Translates to: CFYMCNTDMFPPLLIQYSEPFCF*ITLWIA Trigger: TGCTATCCATAGAGTTATCAAAAAGCAGAAAGGCTC...GCTGTACTGAATCAATAATGGTGGAAACATGTCTGTGTTACACATGTAAAAACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117211.3 |
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| CDS GCA 72 bp | CTTAGTGCCACTCTGAATTTAAGTCTTGAGCCTTTCTaGTTTTTGATAACTCTATGGATAGCACTTTTCACT | + |
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Preference number: 6 (lower is better) Translates to: LSATLNLSLEPF*FLITLWIALFT Trigger: AGTGAAAAGTGCTATCCATAGAGTTATCAAAAAGCAGAAAGGCTCAAGACTTAAATTCAGAGTGGCACTAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094913.6 ENSMUST00000117211.3 |
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| CDS CAA 72 bp | GCCACTCTGAATTTAAGTCTTGAGCCTTTCTGCTTTTaGATAACTCTATGGATAGCACTTTTCACTTCTTTG | + |
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Preference number: 6 (lower is better) Translates to: ATLNLSLEPFCF*ITLWIALFTSL Trigger: CAAAGAAGTGAAAAGTGCTATCCATAGAGTTATCAAAAAGCAGAAAGGCTCAAGACTTAAATTCAGAGTGGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094913.6 ENSMUST00000117211.3 |
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