Pregenerated sensors for OLFR110 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000090894Ensembl transcript IDs: ENSMUST00000168318.3, ENSMUST00000216472.2
Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | AAAACCCACAAAACCCATCTCCTTCTTCAGGTGAAGTATGTTGTAACAGCAAGGCAGCCTTTTCAAGGCTaGAAAAGGCAGACTCAAAGC | + |
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Preference number: 2 (lower is better) Translates to: KTHKTHLLLQVKYVVTARQPFQG*KRQTQS Trigger: GCTTTGAGTCTGCCTTTTCCAGCCTTGAAAAGGCTG...CCTTGCTGTTACAACATACTTCACCTGAAGAAGGAGATGGGTTTTGTGGGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000168318.3 ENSMUST00000216472.2 |
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| 3UTR-3UTR CCA 90 bp | AAAACATCAAAGTTTTCATGGGAACCCGCAATGGTAACCAAGACAGATGTCTCACAGCCTTTTCAAGGCTaGAAAAGGCAGACTCAAAGC | + |
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Preference number: 2 (lower is better) Translates to: KTSKFSWEPAMVTKTDVSQPFQG*KRQTQS Trigger: GCTTTGAGTCTGCCTTTTCCAGCCTTGAAAAGGCTG...TGAGACATCTGTCTTGGTTACCATTGCGGGTTCCCATGAAAACTTTGATGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000168318.3 ENSMUST00000216472.2 |
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| 3UTR-3UTR CCA 90 bp | AAAACCCACAAAACCCATCTCCTTCTTCAGGTGAAGTATGTTGTAACAGCAAGGATGAGGATTCCAAAATaGAGAAGTCGAATAAAAAGG | + |
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Preference number: 2 (lower is better) Translates to: KTHKTHLLLQVKYVVTARMRIPK*RSRIKR Trigger: CCTTTTTATTCGACTTCTCCATTTTGGAATCCTCAT...CCTTGCTGTTACAACATACTTCACCTGAAGAAGGAGATGGGTTTTGTGGGTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000168318.3 ENSMUST00000216472.2 |
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| 3UTR-3UTR CAA 90 bp | GTAACAGCAAGGTCAGCACAAGCAGCTAAAAACATCAAAGTTTTCATGGGAACCCAACCCTTCATTCTGTaGCCAAATATAACAAGCAGA | + |
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Preference number: 3 (lower is better) Translates to: VTARSAQAAKNIKVFMGTQPFIL*PNITSR Trigger: TCTGCTTGTTATATTTGGCAACAGAATGAAGGGTTG...GGTTCCCATGAAAACTTTGATGTTTTTAGCTGCTTGTGCTGACCTTGCTGTTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000168318.3 ENSMUST00000216472.2 |
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| 3UTR-3UTR CAA 90 bp | AAAACATCAAAGTTTTCATGGGAACCCGCAATGGTAACCAAGACAGATGTCTCACAACCCTTCATTCTGTaGCCAAATATAACAAGCAGA | + |
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Preference number: 3 (lower is better) Translates to: KTSKFSWEPAMVTKTDVSQPFIL*PNITSR Trigger: TCTGCTTGTTATATTTGGCAACAGAATGAAGGGTTG...TGAGACATCTGTCTTGGTTACCATTGCGGGTTCCCATGAAAACTTTGATGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000168318.3 ENSMUST00000216472.2 |
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| CDS-3UTR TCA 90 bp | GTAACAGCAAGGTCAGCACAAGCAGCTAAAAACATCAAAGTTTTCATGGGAACCTGTGCAACACTGAGTTaGGAAACCCACCTGTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: VTARSAQAAKNIKVFMGTCATLS*ETHLSS Trigger: GCTGGACAGGTGGGTTTCTCAACTCAGTGTTGCACA...GGTTCCCATGAAAACTTTGATGTTTTTAGCTGCTTGTGCTGACCTTGCTGTTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000168318.3 ENSMUST00000216472.2 |
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| CDS-3UTR TCA 90 bp | AAAACATCAAAGTTTTCATGGGAACCCGCAATGGTAACCAAGACAGATGTCTCATGTGCAACACTGAGTTaGGAAACCCACCTGTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: KTSKFSWEPAMVTKTDVSCATLS*ETHLSS Trigger: GCTGGACAGGTGGGTTTCTCAACTCAGTGTTGCACA...TGAGACATCTGTCTTGGTTACCATTGCGGGTTCCCATGAAAACTTTGATGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000168318.3 ENSMUST00000216472.2 |
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| CDS-3UTR TCA 90 bp | GTAACAGCAAGGTCAGCACAAGCAGCTAAAAACATCAAAGTTTTCATGGGAACCAAAGGTAGGAAAGGATaGCGCACAGGAAAGGAGTCC | + |
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Preference number: 4 (lower is better) Translates to: VTARSAQAAKNIKVFMGTKGRKG*RTGKES Trigger: GGACTCCTTTCCTGTGCGTCATCCTTTCCTACCTTT...GGTTCCCATGAAAACTTTGATGTTTTTAGCTGCTTGTGCTGACCTTGCTGTTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000168318.3 ENSMUST00000216472.2 |
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| CDS-3UTR TCA 90 bp | AAAACCCACAAAACCCATCTCCTTCTTCAGGTGAAGTATGTTGTAACAGCAAGGAAAGGTAGGAAAGGATaGCGCACAGGAAAGGAGTCC | + |
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Preference number: 4 (lower is better) Translates to: KTHKTHLLLQVKYVVTARKGRKG*RTGKES Trigger: GGACTCCTTTCCTGTGCGTCATCCTTTCCTACCTTT...CCTTGCTGTTACAACATACTTCACCTGAAGAAGGAGATGGGTTTTGTGGGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000168318.3 ENSMUST00000216472.2 |
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| CDS-3UTR TCA 90 bp | AAAACCCACAAAACCCATCTCCTTCTTCAGGTGAAGTATGTTGTAACAGCAAGGGCAAAGCCAGTTCATTaGGGGAAGTATCACCACAAG | + |
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Preference number: 4 (lower is better) Translates to: KTHKTHLLLQVKYVVTARAKPVH*GKYHHK Trigger: CTTGTGGTGATACTTCCCTCAATGAACTGGCTTTGC...CCTTGCTGTTACAACATACTTCACCTGAAGAAGGAGATGGGTTTTGTGGGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000168318.3 ENSMUST00000216472.2 |
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| CDS-3UTR TCA 90 bp | GTAACAGCAAGGTCAGCACAAGCAGCTAAAAACATCAAAGTTTTCATGGGAACCGCAAAGCCAGTTCATTaGGGGAAGTATCACCACAAG | + |
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Preference number: 4 (lower is better) Translates to: VTARSAQAAKNIKVFMGTAKPVH*GKYHHK Trigger: CTTGTGGTGATACTTCCCTCAATGAACTGGCTTTGC...GGTTCCCATGAAAACTTTGATGTTTTTAGCTGCTTGTGCTGACCTTGCTGTTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000168318.3 ENSMUST00000216472.2 |
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| CDS-3UTR TCA 90 bp | GTAACAGCAAGGTCAGCACAAGCAGCTAAAAACATCAAAGTTTTCATGGGAACCGATTCAGCATGGGTGTaGCAACACTATACAGCACTG | + |
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Preference number: 4 (lower is better) Translates to: VTARSAQAAKNIKVFMGTDSAWV*QHYTAL Trigger: CAGTGCTGTATAGTGTTGTCACACCCATGCTGAATC...GGTTCCCATGAAAACTTTGATGTTTTTAGCTGCTTGTGCTGACCTTGCTGTTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000168318.3 ENSMUST00000216472.2 |
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| CDS-3UTR CCA 90 bp | AAAACCCACAAAACCCATCTCCTTCTTCAGGTGAAGTATGTTGTAACAGCAAGGATCAGAAGAGAAAACTaGTGGCTGCCACTTTCTCCC | + |
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Preference number: 4 (lower is better) Translates to: KTHKTHLLLQVKYVVTARIRREN*WLPLSP Trigger: GGGAGAAAGTGGCAGCCACCAGTTTTCTCTTCTGAT...CCTTGCTGTTACAACATACTTCACCTGAAGAAGGAGATGGGTTTTGTGGGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000168318.3 ENSMUST00000216472.2 |
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| CDS-3UTR TCA 90 bp | AAAACATCAAAGTTTTCATGGGAACCCGCAATGGTAACCAAGACAGATGTCTCAGATTCAGCATGGGTGTaGCAACACTATACAGCACTG | + |
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Preference number: 4 (lower is better) Translates to: KTSKFSWEPAMVTKTDVSDSAWV*QHYTAL Trigger: CAGTGCTGTATAGTGTTGTCACACCCATGCTGAATC...TGAGACATCTGTCTTGGTTACCATTGCGGGTTCCCATGAAAACTTTGATGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000168318.3 ENSMUST00000216472.2 |
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| CDS-3UTR GCA 90 bp | AGCGATGAACCAACTTTAGATGAGGATTCCAAAATGGAGAAGTCGAATAAAAAGGAGAAAACTGGTGGCTaGCACTTTCTCCCTATGGCC | + |
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Preference number: 4 (lower is better) Translates to: SDEPTLDEDSKMEKSNKKEKTGG*HFLPMA Trigger: GGCCATAGGGAGAAAGTGGCAGCCACCAGTTTTCTC...CTTTTTATTCGACTTCTCCATTTTGGAATCCTCATCTAAAGTTGGTTCATCGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000168318.3 ENSMUST00000216472.2 |
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| CDS-3UTR CCA 90 bp | GTAACAGCAAGGTCAGCACAAGCAGCTAAAAACATCAAAGTTTTCATGGGAACCAGAAGAGAAAACTGGTaGCTGCCACTTTCTCCCTAT | + |
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Preference number: 4 (lower is better) Translates to: VTARSAQAAKNIKVFMGTRRENW*LPLSPY Trigger: ATAGGGAGAAAGTGGCAGCCACCAGTTTTCTCTTCT...GGTTCCCATGAAAACTTTGATGTTTTTAGCTGCTTGTGCTGACCTTGCTGTTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000168318.3 ENSMUST00000216472.2 |
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| CDS-3UTR TCA 90 bp | AAAACCCACAAAACCCATCTCCTTCTTCAGGTGAAGTATGTTGTAACAGCAAGGAGCCAACAAAGAAAATaGATGCAAAGAGCTGGGTCA | + |
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Preference number: 4 (lower is better) Translates to: KTHKTHLLLQVKYVVTARSQQRK*MQRAGS Trigger: TGACCCAGCTCTTTGCATTCATTTTCTTTGTTGGCT...CCTTGCTGTTACAACATACTTCACCTGAAGAAGGAGATGGGTTTTGTGGGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000168318.3 ENSMUST00000216472.2 |
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| CDS-3UTR GCA 90 bp | GTAACAGCAAGGTCAGCACAAGCAGCTAAAAACATCAAAGTTTTCATGGGAACCAATATATCGATCATATaGCATTGCTGCCAGGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: VTARSAQAAKNIKVFMGTNISII*HCCQEE Trigger: CTCCTCCTGGCAGCAATGGCATATGATCGATATATT...GGTTCCCATGAAAACTTTGATGTTTTTAGCTGCTTGTGCTGACCTTGCTGTTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000168318.3 ENSMUST00000216472.2 |
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| CDS-3UTR CCA 90 bp | AAAACATCAAAGTTTTCATGGGAACCCGCAATGGTAACCAAGACAGATGTCTCAAGAAGAGAAAACTGGTaGCTGCCACTTTCTCCCTAT | + |
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Preference number: 4 (lower is better) Translates to: KTSKFSWEPAMVTKTDVSRRENW*LPLSPY Trigger: ATAGGGAGAAAGTGGCAGCCACCAGTTTTCTCTTCT...TGAGACATCTGTCTTGGTTACCATTGCGGGTTCCCATGAAAACTTTGATGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000168318.3 ENSMUST00000216472.2 |
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| CDS-3UTR TCA 90 bp | GTAACAGCAAGGTCAGCACAAGCAGCTAAAAACATCAAAGTTTTCATGGGAACCAGCCTCCATAGGAAATaGTTTTCTTCTCTGACAGAA | + |
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Preference number: 4 (lower is better) Translates to: VTARSAQAAKNIKVFMGTSLHRK*FSSLTE Trigger: TTCTGTCAGAGAAGAAAATCATTTCCTATGGAGGCT...GGTTCCCATGAAAACTTTGATGTTTTTAGCTGCTTGTGCTGACCTTGCTGTTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000168318.3 ENSMUST00000216472.2 |
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| CDS-3UTR GCA 90 bp | AAAACATCAAAGTTTTCATGGGAACCCGCAATGGTAACCAAGACAGATGTCTCAAATATATCGATCATATaGCATTGCTGCCAGGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: KTSKFSWEPAMVTKTDVSNISII*HCCQEE Trigger: CTCCTCCTGGCAGCAATGGCATATGATCGATATATT...TGAGACATCTGTCTTGGTTACCATTGCGGGTTCCCATGAAAACTTTGATGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000168318.3 ENSMUST00000216472.2 |
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| CDS-3UTR CCA 90 bp | AGCGATGAACCAACTTTAGATGAGGATTCCAAAATGGAGAAGTCGAATAAAAAGATCAGAAGAGAAAACTaGTGGCTGCCACTTTCTCCC | + |
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Preference number: 4 (lower is better) Translates to: SDEPTLDEDSKMEKSNKKIRREN*WLPLSP Trigger: GGGAGAAAGTGGCAGCCACCAGTTTTCTCTTCTGAT...CTTTTTATTCGACTTCTCCATTTTGGAATCCTCATCTAAAGTTGGTTCATCGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000168318.3 ENSMUST00000216472.2 |
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| CDS-3UTR TCA 90 bp | AAAACCCACAAAACCCATCTCCTTCTTCAGGTGAAGTATGTTGTAACAGCAAGGAATGATTTTCTTCTCTaGCAGAAGATGCACCATCAT | + |
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Preference number: 4 (lower is better) Translates to: KTHKTHLLLQVKYVVTARNDFLL*QKMHHH Trigger: ATGATGGTGCATCTTCTGTCAGAGAAGAAAATCATT...CCTTGCTGTTACAACATACTTCACCTGAAGAAGGAGATGGGTTTTGTGGGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000168318.3 ENSMUST00000216472.2 |
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| CDS-3UTR TCA 90 bp | AAAACATCAAAGTTTTCATGGGAACCCGCAATGGTAACCAAGACAGATGTCTCAAGCCTCCATAGGAAATaGTTTTCTTCTCTGACAGAA | + |
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Preference number: 4 (lower is better) Translates to: KTSKFSWEPAMVTKTDVSSLHRK*FSSLTE Trigger: TTCTGTCAGAGAAGAAAATCATTTCCTATGGAGGCT...TGAGACATCTGTCTTGGTTACCATTGCGGGTTCCCATGAAAACTTTGATGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000168318.3 ENSMUST00000216472.2 |
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| CDS-3UTR TCA 90 bp | GTAACAGCAAGGTCAGCACAAGCAGCTAAAAACATCAAAGTTTTCATGGGAACCAACACTATACAGCACTaGGATCAATCTATCTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: VTARSAQAAKNIKVFMGTNTIQH*DQSIFL Trigger: GAGAAAGATAGATTGATCTCAGTGCTGTATAGTGTT...GGTTCCCATGAAAACTTTGATGTTTTTAGCTGCTTGTGCTGACCTTGCTGTTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000168318.3 ENSMUST00000216472.2 |
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| CDS-3UTR GCA 90 bp | GTAACAGCAAGGTCAGCACAAGCAGCTAAAAACATCAAAGTTTTCATGGGAACCAACAAAGAAAATGAATaGAAAGAGCTGGGTCACACA | + |
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Preference number: 4 (lower is better) Translates to: VTARSAQAAKNIKVFMGTNKENE*KELGHT Trigger: TGTGTGACCCAGCTCTTTGCATTCATTTTCTTTGTT...GGTTCCCATGAAAACTTTGATGTTTTTAGCTGCTTGTGCTGACCTTGCTGTTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000168318.3 ENSMUST00000216472.2 |
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| CDS-3UTR TCA 90 bp | AAAACATCAAAGTTTTCATGGGAACCCGCAATGGTAACCAAGACAGATGTCTCAAATGATTTTCTTCTCTaGCAGAAGATGCACCATCAT | + |
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Preference number: 4 (lower is better) Translates to: KTSKFSWEPAMVTKTDVSNDFLL*QKMHHH Trigger: ATGATGGTGCATCTTCTGTCAGAGAAGAAAATCATT...TGAGACATCTGTCTTGGTTACCATTGCGGGTTCCCATGAAAACTTTGATGTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000168318.3 ENSMUST00000216472.2 |
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| CDS-3UTR GCA 90 bp | AAAACATCAAAGTTTTCATGGGAACCCGCAATGGTAACCAAGACAGATGTCTCAAACAAAGAAAATGAATaGAAAGAGCTGGGTCACACA | + |
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Preference number: 4 (lower is better) Translates to: KTSKFSWEPAMVTKTDVSNKENE*KELGHT Trigger: TGTGTGACCCAGCTCTTTGCATTCATTTTCTTTGTT...TGAGACATCTGTCTTGGTTACCATTGCGGGTTCCCATGAAAACTTTGATGTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000168318.3 ENSMUST00000216472.2 |
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| CDS TCA 90 bp | CACAAAAGGGCAGGTGGAAGGTCAAAACCGTGTGCAACACTGAGTTaGGAAACCCACCTGTCCAGCATGAAGCTGCTAACCAGCTGCACA | + |
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Preference number: 5 (lower is better) Translates to: HKRAGGRSKPCATLS*ETHLSSMKLLTSCT Trigger: TGTGCAGCTGGTTAGCAGCTTCATGCTGGACAGGTGGGTTTCTCAACTCAGTGTTGCACACGGTTTTGACCTTCCACCTGCCCTTTTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000168318.3 ENSMUST00000216472.2 |
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| CDS-3UTR CAA 90 bp | AAAACATCAAAGTTTTCATGGGAACCCGCAATGGTAACCAAGACAGATGTCTCAGTGTGCAACACTGAGTaGAGAAACCCACCTGTCCAG | + |
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Preference number: 5 (lower is better) Translates to: KTSKFSWEPAMVTKTDVSVCNTE*RNPPVQ Trigger: CTGGACAGGTGGGTTTCTCAACTCAGTGTTGCACAC...TGAGACATCTGTCTTGGTTACCATTGCGGGTTCCCATGAAAACTTTGATGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000168318.3 ENSMUST00000216472.2 |
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| CDS-3UTR CAA 90 bp | AGCGATGAACCAACTTTAGATGAGGATTCCAAAATGGAGAAGTCGAATAAAAAGGTGTGCAACACTGAGTaGAGAAACCCACCTGTCCAG | + |
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Preference number: 5 (lower is better) Translates to: SDEPTLDEDSKMEKSNKKVCNTE*RNPPVQ Trigger: CTGGACAGGTGGGTTTCTCAACTCAGTGTTGCACAC...CTTTTTATTCGACTTCTCCATTTTGGAATCCTCATCTAAAGTTGGTTCATCGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000168318.3 ENSMUST00000216472.2 |
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| CDS-3UTR CAA 90 bp | GTAACAGCAAGGTCAGCACAAGCAGCTAAAAACATCAAAGTTTTCATGGGAACCCAGCTGCACAGAGCCTaGTTCATAATAAATGAGTAC | + |
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Preference number: 5 (lower is better) Translates to: VTARSAQAAKNIKVFMGTQLHRA*FIINEY Trigger: GTACTCATTTATTATGAACAAGGCTCTGTGCAGCTG...GGTTCCCATGAAAACTTTGATGTTTTTAGCTGCTTGTGCTGACCTTGCTGTTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000168318.3 ENSMUST00000216472.2 |
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| CDS-3UTR CAA 90 bp | AAAACATCAAAGTTTTCATGGGAACCCGCAATGGTAACCAAGACAGATGTCTCACAGCTGCACAGAGCCTaGTTCATAATAAATGAGTAC | + |
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Preference number: 5 (lower is better) Translates to: KTSKFSWEPAMVTKTDVSQLHRA*FIINEY Trigger: GTACTCATTTATTATGAACAAGGCTCTGTGCAGCTG...TGAGACATCTGTCTTGGTTACCATTGCGGGTTCCCATGAAAACTTTGATGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000168318.3 ENSMUST00000216472.2 |
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| CDS TCA 72 bp | GCAGGTGGAAGGTCAAAACCGTGTGCAACACTGAGTTaGGAAACCCACCTGTCCAGCATGAAGCTGCTAACC | + |
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Preference number: 6 (lower is better) Translates to: AGGRSKPCATLS*ETHLSSMKLLT Trigger: GGTTAGCAGCTTCATGCTGGACAGGTGGGTTTCTCAACTCAGTGTTGCACACGGTTTTGACCTTCCACCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168318.3 ENSMUST00000216472.2 |
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| CDS CAA 72 bp | GGCAGGTGGAAGGTCAAAACCGTGTGCAACACTGAGTaGAGAAACCCACCTGTCCAGCATGAAGCTGCTAAC | + |
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Preference number: 6 (lower is better) Translates to: GRWKVKTVCNTE*RNPPVQHEAAN Trigger: GTTAGCAGCTTCATGCTGGACAGGTGGGTTTCTCAACTCAGTGTTGCACACGGTTTTGACCTTCCACCTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168318.3 ENSMUST00000216472.2 |
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| CDS CAA 72 bp | GTCCAGCATGAAGCTGCTAACCAGCTGCACAGAGCCTaGTTCATAATAAATGAGTACCTTAACGGCTTACAG | + |
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Preference number: 6 (lower is better) Translates to: VQHEAANQLHRA*FIINEYLNGLQ Trigger: CTGTAAGCCGTTAAGGTACTCATTTATTATGAACAAGGCTCTGTGCAGCTGGTTAGCAGCTTCATGCTGGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168318.3 ENSMUST00000216472.2 |
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| CDS CAA 90 bp | AACCCACCTGTCCAGCATGAAGCTGCTAACCAGCTGCACAGAGCCTaGTTCATAATAAATGAGTACCTTAACGGCTTACAGATAGCAATA | + |
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Preference number: 6 (lower is better) Translates to: NPPVQHEAANQLHRA*FIINEYLNGLQIAI Trigger: TATTGCTATCTGTAAGCCGTTAAGGTACTCATTTATTATGAACAAGGCTCTGTGCAGCTGGTTAGCAGCTTCATGCTGGACAGGTGGGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168318.3 ENSMUST00000216472.2 |
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