Pregenerated sensors for OLFR1099 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075168Ensembl transcript IDs: ENSMUST00000099871.5, ENSMUST00000213456.2
Found 21 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACATCCTATGGAAGTCTTCATAATTTTGGATATCAAGTTTCAGTATaGCTAGGTGCATCTTCTCTTATTGTGGCTAGACAAATAGAAGGA | + |
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Preference number: 1 (lower is better) Translates to: TSYGSLHNFGYQVSV*LGASSLIVARQIEG Trigger: TCCTTCTATTTGTCTAGCCACAATAAGAGAAGATGCACCTAGTCATACTGAAACTTGATATCCAAAATTATGAAGACTTCCATAGGATGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213456.2 |
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| 3UTR-3UTR TCA 90 bp | GTGAACTGCTTTCGATGTAACCATGAAGGACTAATAAGTCTTACTATCCATGTACAAATTCTTCAGCAATaGAGGTTAGGGCTCTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: VNCFRCNHEGLISLTIHVQILQQ*RLGLSQ Trigger: CTGAGAGAGCCCTAACCTTCATTGCTGAAGAATTTG...TACATGGATAGTAAGACTTATTAGTCCTTCATGGTTACATCGAAAGCAGTTCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213456.2 |
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| 3UTR-3UTR GCA 90 bp | GTGAACTGCTTTCGATGTAACCATGAAGGACTAATAAGTCTTACTATCCATGTAAATTTCATTGGCGCATaGATACACACACACAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: VNCFRCNHEGLISLTIHVNFIGA*IHTHRE Trigger: CTCTCTGTGTGTGTGTATGCATGCGCCAATGAAATT...TACATGGATAGTAAGACTTATTAGTCCTTCATGGTTACATCGAAAGCAGTTCAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213456.2 |
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| 3UTR-3UTR TCA 90 bp | GTGAACTGCTTTCGATGTAACCATGAAGGACTAATAAGTCTTACTATCCATGTATTCATGTTTGGAATTTaGGGGGATCATCCAATGACA | + |
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Preference number: 2 (lower is better) Translates to: VNCFRCNHEGLISLTIHVFMFGI*GDHPMT Trigger: TGTCATTGGATGATCCCCTCAAATTCCAAACATGAA...TACATGGATAGTAAGACTTATTAGTCCTTCATGGTTACATCGAAAGCAGTTCAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213456.2 |
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| 3UTR-3UTR CCA 90 bp | GTGAACTGCTTTCGATGTAACCATGAAGGACTAATAAGTCTTACTATCCATGTATTCTTTCTTCATGTTTaGAATTTGAGGGGATCATCC | + |
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Preference number: 2 (lower is better) Translates to: VNCFRCNHEGLISLTIHVFFLHV*NLRGSS Trigger: GGATGATCCCCTCAAATTCCAAACATGAAGAAAGAA...TACATGGATAGTAAGACTTATTAGTCCTTCATGGTTACATCGAAAGCAGTTCAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213456.2 |
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| 3UTR-3UTR CAA 90 bp | GTGAACTGCTTTCGATGTAACCATGAAGGACTAATAAGTCTTACTATCCATGTAAAGAGGGACAGCATATaGGTAATTAGTGATAAGTCC | + |
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Preference number: 3 (lower is better) Translates to: VNCFRCNHEGLISLTIHVKRDSI*VISDKS Trigger: GGACTTATCACTAATTACCAATATGCTGTCCCTCTT...TACATGGATAGTAAGACTTATTAGTCCTTCATGGTTACATCGAAAGCAGTTCAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213456.2 |
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| 3UTR-3UTR CAA 90 bp | GTGAACTGCTTTCGATGTAACCATGAAGGACTAATAAGTCTTACTATCCATGTATTTCTTTCTTCATGTTaGGAATTTGAGGGGATCATC | + |
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Preference number: 3 (lower is better) Translates to: VNCFRCNHEGLISLTIHVFLSSC*EFEGII Trigger: GATGATCCCCTCAAATTCCAAACATGAAGAAAGAAA...TACATGGATAGTAAGACTTATTAGTCCTTCATGGTTACATCGAAAGCAGTTCAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213456.2 |
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| CDS-3UTR TCA 90 bp | GTGAACTGCTTTCGATGTAACCATGAAGGACTAATAAGTCTTACTATCCATGTAACAGATAGGACCAGCTaGACCTCCTTGGAATCTGTC | + |
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Preference number: 4 (lower is better) Translates to: VNCFRCNHEGLISLTIHVTDRTS*TSLESV Trigger: GACAGATTCCAAGGAGGTTCAGCTGGTCCTATCTGT...TACATGGATAGTAAGACTTATTAGTCCTTCATGGTTACATCGAAAGCAGTTCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213456.2 |
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| CDS-3UTR TCA 90 bp | GTGAACTGCTTTCGATGTAACCATGAAGGACTAATAAGTCTTACTATCCATGTAATGAGAGGCACAAGTTaGGAAGGCCTTTTGCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: VNCFRCNHEGLISLTIHVMRGTS*EGLLLS Trigger: GGAAAGCAAAAGGCCTTCTCAACTTGTGCCTCTCAT...TACATGGATAGTAAGACTTATTAGTCCTTCATGGTTACATCGAAAGCAGTTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213456.2 |
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| CDS-3UTR TCA 90 bp | GTGAACTGCTTTCGATGTAACCATGAAGGACTAATAAGTCTTACTATCCATGTAGTAACTGCCAGGATATaGGAGGCACAAGTTGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: VNCFRCNHEGLISLTIHVVTARI*EAQVEK Trigger: CTTCTCAACTTGTGCCTCTCATATCCTGGCAGTTAC...TACATGGATAGTAAGACTTATTAGTCCTTCATGGTTACATCGAAAGCAGTTCAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213456.2 |
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| CDS-3UTR TCA 90 bp | GTGAACTGCTTTCGATGTAACCATGAAGGACTAATAAGTCTTACTATCCATGTAGGACATCTAGACGGATaGTCAGTATCATGCCTATGT | + |
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Preference number: 4 (lower is better) Translates to: VNCFRCNHEGLISLTIHVGHLDG*SVSCLC Trigger: ACATAGGCATGATACTGATCATCCGTCTAGATGTCC...TACATGGATAGTAAGACTTATTAGTCCTTCATGGTTACATCGAAAGCAGTTCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213456.2 |
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| CDS-3UTR TCA 90 bp | GTGAACTGCTTTCGATGTAACCATGAAGGACTAATAAGTCTTACTATCCATGTACCATGCATAACATATTaGCAGTGGAATCCACAGCTC | + |
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Preference number: 4 (lower is better) Translates to: VNCFRCNHEGLISLTIHVPCITY*QWNPQL Trigger: GAGCTGTGGATTCCACTGTCAATATGTTATGCATGG...TACATGGATAGTAAGACTTATTAGTCCTTCATGGTTACATCGAAAGCAGTTCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213456.2 |
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| CDS-3UTR GCA 90 bp | GTGAACTGCTTTCGATGTAACCATGAAGGACTAATAAGTCTTACTATCCATGTAGTTGAGAAGGCCTTTTaGTTTCCTGAAGTGGAACTG | + |
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Preference number: 4 (lower is better) Translates to: VNCFRCNHEGLISLTIHVVEKAF*FPEVEL Trigger: CAGTTCCACTTCAGGAAAGCAAAAGGCCTTCTCAAC...TACATGGATAGTAAGACTTATTAGTCCTTCATGGTTACATCGAAAGCAGTTCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213456.2 |
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| CDS-3UTR TCA 90 bp | GTGAACTGCTTTCGATGTAACCATGAAGGACTAATAAGTCTTACTATCCATGTAAAATACATTGGAGTATaGAGCTGGACATCTAGACGG | + |
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Preference number: 4 (lower is better) Translates to: VNCFRCNHEGLISLTIHVKYIGV*SWTSRR Trigger: CCGTCTAGATGTCCAGCTTCATACTCCAATGTATTT...TACATGGATAGTAAGACTTATTAGTCCTTCATGGTTACATCGAAAGCAGTTCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213456.2 |
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| CDS-3UTR TCA 90 bp | GTGAACTGCTTTCGATGTAACCATGAAGGACTAATAAGTCTTACTATCCATGTAAACACAGAAGCCACTTaGTCCTTTCCCAAAGAGAAA | + |
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Preference number: 4 (lower is better) Translates to: VNCFRCNHEGLISLTIHVNTEAT*SFPKEK Trigger: TTTCTCTTTGGGAAAGGATCAAGTGGCTTCTGTGTT...TACATGGATAGTAAGACTTATTAGTCCTTCATGGTTACATCGAAAGCAGTTCAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213456.2 |
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| CDS-3UTR GCA 90 bp | GTGAACTGCTTTCGATGTAACCATGAAGGACTAATAAGTCTTACTATCCATGTAATAAAATATGGTAACTaGCAGGATATGAGAGGCACA | + |
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Preference number: 4 (lower is better) Translates to: VNCFRCNHEGLISLTIHVIKYGN*QDMRGT Trigger: TGTGCCTCTCATATCCTGGCAGTTACCATATTTTAT...TACATGGATAGTAAGACTTATTAGTCCTTCATGGTTACATCGAAAGCAGTTCAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213456.2 |
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| CDS-3UTR CAA 90 bp | GTGAACTGCTTTCGATGTAACCATGAAGGACTAATAAGTCTTACTATCCATGTATGGATGACATTGGAGTaGCAGAAATCCAGTGTACCC | + |
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Preference number: 5 (lower is better) Translates to: VNCFRCNHEGLISLTIHVWMTLE*QKSSVP Trigger: GGGTACACTGGATTTCTGCAACTCCAATGTCATCCA...TACATGGATAGTAAGACTTATTAGTCCTTCATGGTTACATCGAAAGCAGTTCAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213456.2 |
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| CDS TCA 72 bp | CATATTGACAGTGGAATCCACAGCTCCAAACACATATaGCCCAGTAAGGAGGGCACTACAGAATCTTTTGGA | + |
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Preference number: 6 (lower is better) Translates to: HIDSGIHSSKHI*PSKEGTTESFG Trigger: TCCAAAAGATTCTGTAGTGCCCTCCTTACTGGGTCATATGTGTTTGGAGCTGTGGATTCCACTGTCAATATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099871.5 ENSMUST00000213456.2 |
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| CDS CAA 90 bp | ATGACATTGGAGTTGCAGAAATCCAGTGTACCCATGCATAACATATaGACAGTGGAATCCACAGCTCCAAACACATATGACCCAGTAAGG | + |
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Preference number: 6 (lower is better) Translates to: MTLELQKSSVPMHNI*TVESTAPNTYDPVR Trigger: CCTTACTGGGTCATATGTGTTTGGAGCTGTGGATTCCACTGTCAATATGTTATGCATGGGTACACTGGATTTCTGCAACTCCAATGTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099871.5 ENSMUST00000213456.2 |
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| CDS TCA 72 bp | AGTTGCAGAAATCCAGTGTACCCATGCATAACATATTaGCAGTGGAATCCACAGCTCCAAACACATATGACC | + |
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Preference number: 6 (lower is better) Translates to: SCRNPVYPCITY*QWNPQLQTHMT Trigger: GGTCATATGTGTTTGGAGCTGTGGATTCCACTGTCAATATGTTATGCATGGGTACACTGGATTTCTGCAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099871.5 ENSMUST00000213456.2 |
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| CDS CAA 72 bp | GAGTTGCAGAAATCCAGTGTACCCATGCATAACATATaGACAGTGGAATCCACAGCTCCAAACACATATGAC | + |
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Preference number: 6 (lower is better) Translates to: ELQKSSVPMHNI*TVESTAPNTYD Trigger: GTCATATGTGTTTGGAGCTGTGGATTCCACTGTCAATATGTTATGCATGGGTACACTGGATTTCTGCAACTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099871.5 ENSMUST00000213456.2 |
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