Pregenerated sensors for OLFR1097 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075170Ensembl transcript IDs: ENSMUST00000111576.3, ENSMUST00000217403.2
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAGCTAGCAGGTATTAAGGAAAGAGGAGGAAAATACAGGCAATGTTaGCAGAGAGAACACAATTGCAGTCTCAGTATGCTGGATACATTG | + |
|
Preference number: 1 (lower is better) Translates to: ELAGIKERGGKYRQC*QREHNCSLSMLDTL Trigger: CAATGTATCCAGCATACTGAGACTGCAATTGTGTTCTCTCTGGCAACATTGCCTGTATTTTCCTCCTCTTTCCTTAATACCTGCTAGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111576.3 ENSMUST00000217403.2 |
||
| 3UTR TCA 90 bp | TTAAATTTACTGTGCATTGGTGTTTTTCCTGCCTATATGACTGTGTaGCAGTGTCAAATCAGCTGGAATCTTGGTCACAGCTTTGAGTTG | + |
|
Preference number: 1 (lower is better) Translates to: LNLLCIGVFPAYMTV*QCQISWNLGHSFEL Trigger: CAACTCAAAGCTGTGACCAAGATTCCAGCTGATTTGACACTGTCACACAGTCATATAGGCAGGAAAAACACCAATGCACAGTAAATTTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111576.3 ENSMUST00000217403.2 |
||
| 3UTR GCA 90 bp | TGTGACAGTGTCAAATCAGCTGGAATCTTGGTCACAGCTTTGAGTTaGCATATGATGTATTATGAATGTAACTTGTGTCCTTTGAATGAG | + |
|
Preference number: 1 (lower is better) Translates to: CDSVKSAGILVTALS*HMMYYECNLCPLNE Trigger: CTCATTCAAAGGACACAAGTTACATTCATAATACATCATATGGCAACTCAAAGCTGTGACCAAGATTCCAGCTGATTTGACACTGTCACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111576.3 ENSMUST00000217403.2 |
||
| 3UTR-3UTR TCA 90 bp | ACGTGCCCTGGTAGGATCAAGCTACACATCTGCTACATGCCTACATATAACACTAGTGCTCTTAACCACTaGGTCTTCTCTCCAGGCATC | + |
|
Preference number: 2 (lower is better) Translates to: TCPGRIKLHICYMPTYNTSALNH*VFSPGI Trigger: GATGCCTGGAGAGAAGACTCAGTGGTTAAGAGCACT...AGTGTTATATGTAGGCATGTAGCAGATGTGTAGCTTGATCCTACCAGGGCACGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111576.3 ENSMUST00000217403.2 |
||
| 3UTR-3UTR TCA 90 bp | AATACAGGCAATGTTGCCAGAGAGAACACAATTGCAGTCTCAGTATGCTGGATAAGTGCTCTTAACCACTaGGTCTTCTCTCCAGGCATC | + |
|
Preference number: 2 (lower is better) Translates to: NTGNVARENTIAVSVCWISALNH*VFSPGI Trigger: GATGCCTGGAGAGAAGACTCAGTGGTTAAGAGCACT...TATCCAGCATACTGAGACTGCAATTGTGTTCTCTCTGGCAACATTGCCTGTATT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111576.3 ENSMUST00000217403.2 |
||
| 3UTR-3UTR CCA 90 bp | ACGTGCCCTGGTAGGATCAAGCTACACATCTGCTACATGCCTACATATAACACTCAGTGTCAAATCAGCTaGAATCTTGGTCACAGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: TCPGRIKLHICYMPTYNTQCQIS*NLGHSF Trigger: AAAGCTGTGACCAAGATTCCAGCTGATTTGACACTG...AGTGTTATATGTAGGCATGTAGCAGATGTGTAGCTTGATCCTACCAGGGCACGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111576.3 ENSMUST00000217403.2 |
||
| 3UTR-3UTR TCA 90 bp | ACGTGCCCTGGTAGGATCAAGCTACACATCTGCTACATGCCTACATATAACACTTATTTCCTGGACTGTTaGTATAATGTTGTGCCACTG | + |
|
Preference number: 2 (lower is better) Translates to: TCPGRIKLHICYMPTYNTYFLDC*YNVVPL Trigger: CAGTGGCACAACATTATATCAACAGTCCAGGAAATA...AGTGTTATATGTAGGCATGTAGCAGATGTGTAGCTTGATCCTACCAGGGCACGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111576.3 ENSMUST00000217403.2 |
||
| 3UTR-3UTR GCA 90 bp | ACGTGCCCTGGTAGGATCAAGCTACACATCTGCTACATGCCTACATATAACACTCATTGGTGTTTTTCCTaGCTATATGACTGTGTGACA | + |
|
Preference number: 2 (lower is better) Translates to: TCPGRIKLHICYMPTYNTHWCFS*LYDCVT Trigger: TGTCACACAGTCATATAGGCAGGAAAAACACCAATG...AGTGTTATATGTAGGCATGTAGCAGATGTGTAGCTTGATCCTACCAGGGCACGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111576.3 ENSMUST00000217403.2 |
||
| 3UTR-3UTR GCA 90 bp | AATACAGGCAATGTTGCCAGAGAGAACACAATTGCAGTCTCAGTATGCTGGATACTCTGCTTTAACTGTTaGGCCATAGAGGACAGAGAT | + |
|
Preference number: 2 (lower is better) Translates to: NTGNVARENTIAVSVCWILCFNC*AIEDRD Trigger: ATCTCTGTCCTCTATGGCGCAACAGTTAAAGCAGAG...TATCCAGCATACTGAGACTGCAATTGTGTTCTCTCTGGCAACATTGCCTGTATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111576.3 ENSMUST00000217403.2 |
||
| 3UTR-3UTR TCA 90 bp | ACGTGCCCTGGTAGGATCAAGCTACACATCTGCTACATGCCTACATATAACACTTCTTATTCCAGTAGGTaGCAGTTAATGCAGAAATTC | + |
|
Preference number: 2 (lower is better) Translates to: TCPGRIKLHICYMPTYNTSYSSR*QLMQKF Trigger: GAATTTCTGCATTAACTGTCACCTACTGGAATAAGA...AGTGTTATATGTAGGCATGTAGCAGATGTGTAGCTTGATCCTACCAGGGCACGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111576.3 ENSMUST00000217403.2 |
||
| 3UTR-3UTR CCA 90 bp | AATACAGGCAATGTTGCCAGAGAGAACACAATTGCAGTCTCAGTATGCTGGATACAGTGTCAAATCAGCTaGAATCTTGGTCACAGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: NTGNVARENTIAVSVCWIQCQIS*NLGHSF Trigger: AAAGCTGTGACCAAGATTCCAGCTGATTTGACACTG...TATCCAGCATACTGAGACTGCAATTGTGTTCTCTCTGGCAACATTGCCTGTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111576.3 ENSMUST00000217403.2 |
||
| 3UTR-3UTR TCA 90 bp | GGAGGAAAATACAGGCAATGTTGCCAGAGAGAACACAATTGCAGTCTCAGTATGACTAGAAAGAAGAACTaGCAAGTCTGTCAGTTTTGT | + |
|
Preference number: 2 (lower is better) Translates to: GGKYRQCCQREHNCSLSMTRKKN*QVCQFC Trigger: ACAAAACTGACAGACTTGTCAGTTCTTCTTTCTAGT...CATACTGAGACTGCAATTGTGTTCTCTCTGGCAACATTGCCTGTATTTTCCTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111576.3 ENSMUST00000217403.2 |
||
| 3UTR-3UTR TCA 90 bp | ATAAGACTTCAATATCACTCCCTACAAGGCCCAGGCAACATTGTAGAAGACAGGACTAGAAAGAAGAACTaGCAAGTCTGTCAGTTTTGT | + |
|
Preference number: 2 (lower is better) Translates to: IRLQYHSLQGPGNIVEDRTRKKN*QVCQFC Trigger: ACAAAACTGACAGACTTGTCAGTTCTTCTTTCTAGT...CCTGTCTTCTACAATGTTGCCTGGGCCTTGTAGGGAGTGATATTGAAGTCTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111576.3 ENSMUST00000217403.2 |
||
| 3UTR-3UTR TCA 90 bp | AATACAGGCAATGTTGCCAGAGAGAACACAATTGCAGTCTCAGTATGCTGGATATTTTTCCTGCCTATATaGCTGTGTGACAGTGTCAAA | + |
|
Preference number: 2 (lower is better) Translates to: NTGNVARENTIAVSVCWIFFLPI*LCDSVK Trigger: TTTGACACTGTCACACAGTCATATAGGCAGGAAAAA...TATCCAGCATACTGAGACTGCAATTGTGTTCTCTCTGGCAACATTGCCTGTATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111576.3 ENSMUST00000217403.2 |
||
| 3UTR CAA 90 bp | GCTTTGAGTTGCCATATGATGTATTATGAATGTAACTTGTGTCCTTaGAATGAGCAGATAGTGCTCTTAACCACTGAGTCTTCTCTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: ALSCHMMYYECNLCP*NEQIVLLTTESSLQ Trigger: CTGGAGAGAAGACTCAGTGGTTAAGAGCACTATCTGCTCATTCAAAGGACACAAGTTACATTCATAATACATCATATGGCAACTCAAAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111576.3 ENSMUST00000217403.2 |
||
| 3UTR-3UTR GCA 90 bp | GGAGGAAAATACAGGCAATGTTGCCAGAGAGAACACAATTGCAGTCTCAGTATGTACAAGGGTTATTGTTaGATTCAAACTTCTGACCTA | + |
|
Preference number: 2 (lower is better) Translates to: GGKYRQCCQREHNCSLSMYKGYC*IQTSDL Trigger: TAGGTCAGAAGTTTGAATGCAACAATAACCCTTGTA...CATACTGAGACTGCAATTGTGTTCTCTCTGGCAACATTGCCTGTATTTTCCTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111576.3 ENSMUST00000217403.2 |
||
| 3UTR CAA 90 bp | TTGGTCACAGCTTTGAGTTGCCATATGATGTATTATGAATGTAACTaGTGTCCTTTGAATGAGCAGATAGTGCTCTTAACCACTGAGTCT | + |
|
Preference number: 2 (lower is better) Translates to: LVTALSCHMMYYECN*CPLNEQIVLLTTES Trigger: AGACTCAGTGGTTAAGAGCACTATCTGCTCATTCAAAGGACACAAGTTACATTCATAATACATCATATGGCAACTCAAAGCTGTGACCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111576.3 ENSMUST00000217403.2 |
||
| 3UTR GCA 72 bp | ACCATGCTCCAGCCACCTAATCTCTGCTTTAACTGTTaGGCCATAGAGGACAGAGATTTCCCTGACCAAATA | + |
|
Preference number: 3 (lower is better) Translates to: TMLQPPNLCFNC*AIEDRDFPDQI Trigger: TATTTGGTCAGGGAAATCTCTGTCCTCTATGGCGCAACAGTTAAAGCAGAGATTAGGTGGCTGGAGCATGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111576.3 ENSMUST00000217403.2 |
||
| 3UTR TCA 72 bp | CTGTGCATTGGTGTTTTTCCTGCCTATATGACTGTGTaGCAGTGTCAAATCAGCTGGAATCTTGGTCACAGC | + |
|
Preference number: 3 (lower is better) Translates to: LCIGVFPAYMTV*QCQISWNLGHS Trigger: GCTGTGACCAAGATTCCAGCTGATTTGACACTGTCACACAGTCATATAGGCAGGAAAAACACCAATGCACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111576.3 ENSMUST00000217403.2 |
||
| 3UTR-3UTR CAA 90 bp | ATAAGACTTCAATATCACTCCCTACAAGGCCCAGGCAACATTGTAGAAGACAGGTGTAACTTGTGTCCTTaGAATGAGCAGATAGTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: IRLQYHSLQGPGNIVEDRCNLCP*NEQIVL Trigger: GAGCACTATCTGCTCATTCAAAGGACACAAGTTACA...CCTGTCTTCTACAATGTTGCCTGGGCCTTGTAGGGAGTGATATTGAAGTCTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111576.3 ENSMUST00000217403.2 |
||
| 3UTR-3UTR CAA 90 bp | AATACAGGCAATGTTGCCAGAGAGAACACAATTGCAGTCTCAGTATGCTGGATAAAATCAGCTGGAATCTaGGTCACAGCTTTGAGTTGC | + |
|
Preference number: 3 (lower is better) Translates to: NTGNVARENTIAVSVCWIKSAGI*VTALSC Trigger: GCAACTCAAAGCTGTGACCAAGATTCCAGCTGATTT...TATCCAGCATACTGAGACTGCAATTGTGTTCTCTCTGGCAACATTGCCTGTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111576.3 ENSMUST00000217403.2 |
||
| 3UTR-3UTR CAA 90 bp | ACGTGCCCTGGTAGGATCAAGCTACACATCTGCTACATGCCTACATATAACACTAAAATACAGGCAATGTaGCCAGAGAGAACACAATTG | + |
|
Preference number: 3 (lower is better) Translates to: TCPGRIKLHICYMPTYNTKIQAM*PERTQL Trigger: CAATTGTGTTCTCTCTGGCAACATTGCCTGTATTTT...AGTGTTATATGTAGGCATGTAGCAGATGTGTAGCTTGATCCTACCAGGGCACGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111576.3 ENSMUST00000217403.2 |
||
| 3UTR GCA 72 bp | GGTATTAAGGAAAGAGGAGGAAAATACAGGCAATGTTaGCAGAGAGAACACAATTGCAGTCTCAGTATGCTG | + |
|
Preference number: 3 (lower is better) Translates to: GIKERGGKYRQC*QREHNCSLSML Trigger: CAGCATACTGAGACTGCAATTGTGTTCTCTCTGGCAACATTGCCTGTATTTTCCTCCTCTTTCCTTAATACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111576.3 ENSMUST00000217403.2 |
||
| 3UTR CCA 72 bp | CAGCTTTCTCTGGACTTCCATCTATTAAATGTGCAATaGGTCACCTTAGAAGATACTGATGTTGTTATGAGC | + |
|
Preference number: 3 (lower is better) Translates to: QLSLDFHLLNVQ*VTLEDTDVVMS Trigger: GCTCATAACAACATCAGTATCTTCTAAGGTGACCCATTGCACATTTAATAGATGGAAGTCCAGAGAAAGCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111576.3 ENSMUST00000217403.2 |
||
| 3UTR GCA 72 bp | GTCAAATCAGCTGGAATCTTGGTCACAGCTTTGAGTTaGCATATGATGTATTATGAATGTAACTTGTGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: VKSAGILVTALS*HMMYYECNLCP Trigger: AGGACACAAGTTACATTCATAATACATCATATGGCAACTCAAAGCTGTGACCAAGATTCCAGCTGATTTGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111576.3 ENSMUST00000217403.2 |
||
| CDS-3UTR TCA 90 bp | AGAAGAACTGACAAGTCTGTCAGTTTTGTGCCAAGAGAGAAGCTGAAGAACTCAACAGAGAGGACCAGCTaGATCTCCTTGGAGTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RRTDKSVSFVPREKLKNSTERTS*ISLESV Trigger: GACAGACTCCAAGGAGATTCAGCTGGTCCTCTCTGT...TGAGTTCTTCAGCTTCTCTCTTGGCACAAAACTGACAGACTTGTCAGTTCTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111576.3 ENSMUST00000217403.2 |
||
| CDS-3UTR CCA 90 bp | ATAAGACTTCAATATCACTCCCTACAAGGCCCAGGCAACATTGTAGAAGACAGGCCAGCTGAATCTCCTTaGAGTCTGTCAGTCCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: IRLQYHSLQGPGNIVEDRPAESP*SLSVPQ Trigger: TTGTGGGACTGACAGACTCCAAGGAGATTCAGCTGG...CCTGTCTTCTACAATGTTGCCTGGGCCTTGTAGGGAGTGATATTGAAGTCTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111576.3 ENSMUST00000217403.2 |
||
| CDS-3UTR CCA 90 bp | AATACAGGCAATGTTGCCAGAGAGAACACAATTGCAGTCTCAGTATGCTGGATACCAGCTGAATCTCCTTaGAGTCTGTCAGTCCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: NTGNVARENTIAVSVCWIPAESP*SLSVPQ Trigger: TTGTGGGACTGACAGACTCCAAGGAGATTCAGCTGG...TATCCAGCATACTGAGACTGCAATTGTGTTCTCTCTGGCAACATTGCCTGTATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111576.3 ENSMUST00000217403.2 |
||
| CDS-3UTR TCA 90 bp | ACGTGCCCTGGTAGGATCAAGCTACACATCTGCTACATGCCTACATATAACACTAGCTGGACATCTAGATaGATGATCAGTATCATACCT | + |
|
Preference number: 4 (lower is better) Translates to: TCPGRIKLHICYMPTYNTSWTSR*MISIIP Trigger: AGGTATGATACTGATCATTCATCTAGATGTCCAGCT...AGTGTTATATGTAGGCATGTAGCAGATGTGTAGCTTGATCCTACCAGGGCACGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111576.3 ENSMUST00000217403.2 |
||
| CDS-3UTR TCA 90 bp | TTAGCAGAGACTTTCAGTTTCTTCAGTGCCATATCCATTTTACTATCAAATCGAACAGAGAGGACCAGCTaGATCTCCTTGGAGTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LAETFSFFSAISILLSNRTERTS*ISLESV Trigger: GACAGACTCCAAGGAGATTCAGCTGGTCCTCTCTGT...TCGATTTGATAGTAAAATGGATATGGCACTGAAGAAACTGAAAGTCTCTGCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111576.3 ENSMUST00000217403.2 |
||
| CDS-3UTR TCA 90 bp | GGAGGAAAATACAGGCAATGTTGCCAGAGAGAACACAATTGCAGTCTCAGTATGAGCTGGACATCTAGATaGATGATCAGTATCATACCT | + |
|
Preference number: 4 (lower is better) Translates to: GGKYRQCCQREHNCSLSMSWTSR*MISIIP Trigger: AGGTATGATACTGATCATTCATCTAGATGTCCAGCT...CATACTGAGACTGCAATTGTGTTCTCTCTGGCAACATTGCCTGTATTTTCCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111576.3 ENSMUST00000217403.2 |
||
| CDS-3UTR TCA 90 bp | ATAAGACTTCAATATCACTCCCTACAAGGCCCAGGCAACATTGTAGAAGACAGGAATAGATACATAGGATaGGGATATCGTGATGAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: IRLQYHSLQGPGNIVEDRNRYIG*GYRDER Trigger: TCGCTCATCACGATATCCTCATCCTATGTATCTATT...CCTGTCTTCTACAATGTTGCCTGGGCCTTGTAGGGAGTGATATTGAAGTCTTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111576.3 ENSMUST00000217403.2 |
||
| 3UTR CAA 72 bp | AGGAAAATACAGGCAATGTTGCCAGAGAGAACACAATaGCAGTCTCAGTATGCTGGATACATTGTAGATAGG | + |
|
Preference number: 4 (lower is better) Translates to: RKIQAMLPERTQ*QSQYAGYIVDR Trigger: CCTATCTACAATGTATCCAGCATACTGAGACTGCAATTGTGTTCTCTCTGGCAACATTGCCTGTATTTTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111576.3 ENSMUST00000217403.2 |
||
| CDS-3UTR TCA 90 bp | AGAAGAACTGACAAGTCTGTCAGTTTTGTGCCAAGAGAGAAGCTGAAGAACTCAAATAGATACATAGGATaGGGATATCGTGATGAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: RRTDKSVSFVPREKLKNSNRYIG*GYRDER Trigger: TCGCTCATCACGATATCCTCATCCTATGTATCTATT...TGAGTTCTTCAGCTTCTCTCTTGGCACAAAACTGACAGACTTGTCAGTTCTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111576.3 ENSMUST00000217403.2 |
||
| CDS-3UTR TCA 90 bp | GGAGGAAAATACAGGCAATGTTGCCAGAGAGAACACAATTGCAGTCTCAGTATGGGCTTTGTGCTTTCCTaGAGAAGAATTTATCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: GGKYRQCCQREHNCSLSMGFVLS*RRIYLQ Trigger: TTGAAGATAAATTCTTCTTCAGGAAAGCACAAAGCC...CATACTGAGACTGCAATTGTGTTCTCTCTGGCAACATTGCCTGTATTTTCCTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111576.3 ENSMUST00000217403.2 |
||
| CDS-3UTR GCA 90 bp | ACGTGCCCTGGTAGGATCAAGCTACACATCTGCTACATGCCTACATATAACACTAAAACATTCAGAAGCTaGCAAGAGGACAAAGAAATA | + |
|
Preference number: 4 (lower is better) Translates to: TCPGRIKLHICYMPTYNTKTFRS*QEDKEI Trigger: TATTTCTTTGTCCTCTTGGCAGCTTCTGAATGTTTT...AGTGTTATATGTAGGCATGTAGCAGATGTGTAGCTTGATCCTACCAGGGCACGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111576.3 ENSMUST00000217403.2 |
||
| CDS-3UTR GCA 90 bp | ATAAGACTTCAATATCACTCCCTACAAGGCCCAGGCAACATTGTAGAAGACAGGGAATTACTTTGGAGTTaGAGAAATCCAGTGTGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: IRLQYHSLQGPGNIVEDRELLWS*RNPVCL Trigger: TAAGCACACTGGATTTCTGCAACTCCAAAGTAATTC...CCTGTCTTCTACAATGTTGCCTGGGCCTTGTAGGGAGTGATATTGAAGTCTTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111576.3 ENSMUST00000217403.2 |
||
| CDS-3UTR GCA 90 bp | GGAGGAAAATACAGGCAATGTTGCCAGAGAGAACACAATTGCAGTCTCAGTATGCATTATAGGTATCACTaGAGGACAGAGCTAAAATTG | + |
|
Preference number: 4 (lower is better) Translates to: GGKYRQCCQREHNCSLSMHYRYH*RTELKL Trigger: CAATTTTAGCTCTGTCCTGCAGTGATACCTATAATG...CATACTGAGACTGCAATTGTGTTCTCTCTGGCAACATTGCCTGTATTTTCCTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111576.3 ENSMUST00000217403.2 |
||
| CDS-3UTR TCA 90 bp | AATACAGGCAATGTTGCCAGAGAGAACACAATTGCAGTCTCAGTATGCTGGATATTAAGCAAAAGACAGTaGCAGAAGAATCCAAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: NTGNVARENTIAVSVCWILSKRQ*QKNPKL Trigger: GAGTTTTGGATTCTTCTGTCACTGTCTTTTGCTTAA...TATCCAGCATACTGAGACTGCAATTGTGTTCTCTCTGGCAACATTGCCTGTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111576.3 ENSMUST00000217403.2 |
||
| CDS-3UTR GCA 90 bp | AATACAGGCAATGTTGCCAGAGAGAACACAATTGCAGTCTCAGTATGCTGGATAGAATTACTTTGGAGTTaGAGAAATCCAGTGTGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: NTGNVARENTIAVSVCWIELLWS*RNPVCL Trigger: TAAGCACACTGGATTTCTGCAACTCCAAAGTAATTC...TATCCAGCATACTGAGACTGCAATTGTGTTCTCTCTGGCAACATTGCCTGTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111576.3 ENSMUST00000217403.2 |
||
| CDS-3UTR GCA 90 bp | AGAAGAACTGACAAGTCTGTCAGTTTTGTGCCAAGAGAGAAGCTGAAGAACTCACATTATAGGTATCACTaGAGGACAGAGCTAAAATTG | + |
|
Preference number: 4 (lower is better) Translates to: RRTDKSVSFVPREKLKNSHYRYH*RTELKL Trigger: CAATTTTAGCTCTGTCCTGCAGTGATACCTATAATG...TGAGTTCTTCAGCTTCTCTCTTGGCACAAAACTGACAGACTTGTCAGTTCTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111576.3 ENSMUST00000217403.2 |
||
| CDS-3UTR GCA 90 bp | AATACAGGCAATGTTGCCAGAGAGAACACAATTGCAGTCTCAGTATGCTGGATAGAATATAGTGGCTTCTaGATTATAGGTATCACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: NTGNVARENTIAVSVCWIEYSGF*IIGITA Trigger: TGCAGTGATACCTATAATGCAGAAGCCACTATATTC...TATCCAGCATACTGAGACTGCAATTGTGTTCTCTCTGGCAACATTGCCTGTATT 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111576.3 ENSMUST00000217403.2 |
||
| CDS-3UTR GCA 90 bp | AGAAGAACTGACAAGTCTGTCAGTTTTGTGCCAAGAGAGAAGCTGAAGAACTCAGTAGAGAAGGCTTTGTaGTTTCCTGAAGAAGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: RRTDKSVSFVPREKLKNSVEKAL*FPEEEF Trigger: AAATTCTTCTTCAGGAAAGCACAAAGCCTTCTCTAC...TGAGTTCTTCAGCTTCTCTCTTGGCACAAAACTGACAGACTTGTCAGTTCTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111576.3 ENSMUST00000217403.2 |
||
| 3UTR CAA 72 bp | TGCCATATGATGTATTATGAATGTAACTTGTGTCCTTaGAATGAGCAGATAGTGCTCTTAACCACTGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: CHMMYYECNLCP*NEQIVLLTTES Trigger: AGACTCAGTGGTTAAGAGCACTATCTGCTCATTCAAAGGACACAAGTTACATTCATAATACATCATATGGCA 38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111576.3 ENSMUST00000217403.2 |
||
| 3UTR CAA 72 bp | GCTTTGAGTTGCCATATGATGTATTATGAATGTAACTaGTGTCCTTTGAATGAGCAGATAGTGCTCTTAACC | + |
|
Preference number: 4 (lower is better) Translates to: ALSCHMMYYECN*CPLNEQIVLLT Trigger: GGTTAAGAGCACTATCTGCTCATTCAAAGGACACAAGTTACATTCATAATACATCATATGGCAACTCAAAGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111576.3 ENSMUST00000217403.2 |
||
| CDS-3UTR TCA 90 bp | TTAGCAGAGACTTTCAGTTTCTTCAGTGCCATATCCATTTTACTATCAAATCGAGGCTTTGTGCTTTCCTaGAGAAGAATTTATCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LAETFSFFSAISILLSNRGFVLS*RRIYLQ Trigger: TTGAAGATAAATTCTTCTTCAGGAAAGCACAAAGCC...TCGATTTGATAGTAAAATGGATATGGCACTGAAGAAACTGAAAGTCTCTGCTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111576.3 ENSMUST00000217403.2 |
||
| CDS-3UTR GCA 90 bp | TTAGCAGAGACTTTCAGTTTCTTCAGTGCCATATCCATTTTACTATCAAATCGAGAATATAGTGGCTTCTaGATTATAGGTATCACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LAETFSFFSAISILLSNREYSGF*IIGITA Trigger: TGCAGTGATACCTATAATGCAGAAGCCACTATATTC...TCGATTTGATAGTAAAATGGATATGGCACTGAAGAAACTGAAAGTCTCTGCTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111576.3 ENSMUST00000217403.2 |
||
| CDS-3UTR CAA 90 bp | GGAGGAAAATACAGGCAATGTTGCCAGAGAGAACACAATTGCAGTCTCAGTATGAAAAACAGAGGCTACTaGATCCTTTCCCAGGGAGTA | + |
|
Preference number: 5 (lower is better) Translates to: GGKYRQCCQREHNCSLSMKNRGY*ILSQGV Trigger: TACTCCCTGGGAAAGGATCAAGTAGCCTCTGTTTTT...CATACTGAGACTGCAATTGTGTTCTCTCTGGCAACATTGCCTGTATTTTCCTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111576.3 ENSMUST00000217403.2 |
||
| CDS-3UTR CAA 90 bp | AATACAGGCAATGTTGCCAGAGAGAACACAATTGCAGTCTCAGTATGCTGGATAAAAAACAGAGGCTACTaGATCCTTTCCCAGGGAGTA | + |
|
Preference number: 5 (lower is better) Translates to: NTGNVARENTIAVSVCWIKNRGY*ILSQGV Trigger: TACTCCCTGGGAAAGGATCAAGTAGCCTCTGTTTTT...TATCCAGCATACTGAGACTGCAATTGTGTTCTCTCTGGCAACATTGCCTGTATT 43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000111576.3 ENSMUST00000217403.2 |
||
| CDS TCA 72 bp | AGTTGCAGAAATCCAGTGTGCTTAAGCAAAAGACAGTaGCAGAAGAATCCAAAACTCCAATCATGTAGGACA | + |
|
Preference number: 6 (lower is better) Translates to: SCRNPVCLSKRQ*QKNPKLQSCRT Trigger: TGTCCTACATGATTGGAGTTTTGGATTCTTCTGTCACTGTCTTTTGCTTAAGCACACTGGATTTCTGCAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111576.3 ENSMUST00000217403.2 |
||