Pregenerated sensors for OLFR109 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029184Ensembl transcript IDs: ENSMUST00000031086.5, ENSMUST00000214668.2, ENSMUST00000214938.2, ENSMUST00000217602.2
Found 158 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCCCAGGGCAAGCAAGTTGCAAAGTTCACATCTGCCAAGAAGGAATaGACAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAG | + |
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Preference number: 1 (lower is better) Translates to: SQGKQVAKFTSAKKE*TKEGRKEGRKEGRK Trigger: CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTGTTCATTCCTTCTTGGCAGATGTGAACTTTGCAACTTGCTTGCCCTGGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| 3UTR CCA 90 bp | TGTGGGGAGAAGGCCTTTAGATCCTCAAGTGCTTTTTACCAGGCTTaGATATTCCTTCATGCTCTAACTCCTGCATTCATGGCTCTCTGC | + |
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Preference number: 1 (lower is better) Translates to: CGEKAFRSSSAFYQA*IFLHALTPAFMALC Trigger: GCAGAGAGCCATGAATGCAGGAGTTAGAGCATGAAGGAATATCCAAGCCTGGTAAAAAGCACTTGAGGATCTAAAGGCCTTCTCCCCACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| 3UTR GCA 90 bp | CCTGAGCTAAGAATTCTCTTTTGTATTTGCCAGTCTGATGCACCATaGTTCTTCATATGTAGAAGTCCATTCTGTGTGGACTCAGGTATA | + |
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Preference number: 1 (lower is better) Translates to: PELRILFCICQSDAP*FFICRSPFCVDSGI Trigger: TATACCTGAGTCCACACAGAATGGACTTCTACATATGAAGAAGCATGGTGCATCAGACTGGCAAATACAAAAGAGAATTCTTAGCTCAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| 3UTR GCA 90 bp | GCATGTCTTTACCCACAAGTAGATTACAATTTTACAGTACCACCCTaGTGTCTTTGTATGCCTGCCATATGTCATTTAACATTAATCTCC | + |
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Preference number: 1 (lower is better) Translates to: ACLYPQVDYNFTVPP*CLCMPAICHLTLIS Trigger: GGAGATTAATGTTAAATGACATATGGCAGGCATACAAAGACAGCAGGGTGGTACTGTAAAATTGTAATCTACTTGTGGGTAAAGACATGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| 3UTR GCA 90 bp | CTCGATCCTATTACAGAAGCTCTTCTTAAACTCATCTTTGCATGCTaGATGAACTTTCTGGGAAGAGGAGGAAAAACAAACATTTGTTCT | + |
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Preference number: 1 (lower is better) Translates to: LDPITEALLKLIFAC*MNFLGRGGKTNICS Trigger: AGAACAAATGTTTGTTTTTCCTCCTCTTCCCAGAAAGTTCATGCAGCATGCAAAGATGAGTTTAAGAAGAGCTTCTGTAATAGGATCGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| 3UTR GCA 90 bp | CTACTCGATCCTATTACAGAAGCTCTTCTTAAACTCATCTTTGCATaGTGCATGAACTTTCTGGGAAGAGGAGGAAAAACAAACATTTGT | + |
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Preference number: 1 (lower is better) Translates to: LLDPITEALLKLIFA*CMNFLGRGGKTNIC Trigger: ACAAATGTTTGTTTTTCCTCCTCTTCCCAGAAAGTTCATGCAGCATGCAAAGATGAGTTTAAGAAGAGCTTCTGTAATAGGATCGAGTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| 3UTR GCA 90 bp | GCTTTAAAAACAACAAATATGAGGAGTACATTTTCCCACTACTCTTaGCAATGTCTGAAACACCTCACACAGCTCTCTTCAATTTCCTTT | + |
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Preference number: 1 (lower is better) Translates to: ALKTTNMRSTFSHYS*QCLKHLTQLSSISF Trigger: AAAGGAAATTGAAGAGAGCTGTGTGAGGTGTTTCAGACATTGGCAAGAGTAGTGGGAAAATGTACTCCTCATATTTGTTGTTTTTAAAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| 3UTR TCA 90 bp | TTTCCAAACACAGATGTTCAAACATGTGATCCTCATATTGAGTGCTaGGTTTCTACTGAGACTTCCTTACATAATTTCATTACTTTGGGG | + |
|
Preference number: 1 (lower is better) Translates to: FPNTDVQTCDPHIEC*VSTETSLHNFITLG Trigger: CCCCAAAGTAATGAAATTATGTAAGGAAGTCTCAGTAGAAACTCAGCACTCAATATGAGGATCACATGTTTGAACATCTGTGTTTGGAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| 3UTR-3UTR TCA 90 bp | CTCTTTGCCTCAATTCTTAAGTACAGAGAGTGCCTATGGTACCAGGTGTCCACTACCCCAAGAAGAGCCTaGGATCCAAGAGCTCTTGTG | + |
|
Preference number: 2 (lower is better) Translates to: LFASILKYRECLWYQVSTTPRRA*DPRALV Trigger: CACAAGAGCTCTTGGATCTCAGGCTCTTCTTGGGGT...AGTGGACACCTGGTACCATAGGCACTCTCTGTACTTAAGAATTGAGGCAAAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| 3UTR-3UTR GCA 90 bp | AGAGGCCTAGGCAGAGAAGGGGGAATACATTGGAGAGATGTTGGTAAGAAGAGTGTGCACAGACTCACATaGTGCCTTGAGAGACAACTC | + |
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Preference number: 2 (lower is better) Translates to: RGLGREGGIHWRDVGKKSVHRLT*CLERQL Trigger: GAGTTGTCTCTCAAGGCAGCATGTGAGTCTGTGCAC...ACTCTTCTTACCAACATCTCTCCAATGTATTCCCCCTTCTCTGCCTAGGCCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| 3UTR-3UTR CCA 90 bp | GAGCCTGAGATCCAAGAGCTCTTGTGTCTATCTTCAGTGTTTGTCCATCTTCTTCCCAACCCAGTATCATaGAGGGCTAGGCATGGCTTC | + |
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Preference number: 2 (lower is better) Translates to: EPEIQELLCLSSVFVHLLPNPVS*RARHGF Trigger: GAAGCCATGCCTAGCCCTCCATGATACTGGGTTGGG...AAGAAGATGGACAAACACTGAAGATAGACACAAGAGCTCTTGGATCTCAGGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| 3UTR-3UTR GCA 90 bp | TGCTTCTTCATATGTAGAAGTCCATTCTGTGTGGACTCAGGTATAGGCCACAAGGTGCACAGACTCACATaGTGCCTTGAGAGACAACTC | + |
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Preference number: 2 (lower is better) Translates to: CFFICRSPFCVDSGIGHKVHRLT*CLERQL Trigger: GAGTTGTCTCTCAAGGCAGCATGTGAGTCTGTGCAC...CTTGTGGCCTATACCTGAGTCCACACAGAATGGACTTCTACATATGAAGAAGCA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| 3UTR-3UTR GCA 90 bp | CTCTTTGCCTCAATTCTTAAGTACAGAGAGTGCCTATGGTACCAGGTGTCCACTGAGGTCCTTAAGGTGTaGAACCTTTCCAAACACAGA | + |
|
Preference number: 2 (lower is better) Translates to: LFASILKYRECLWYQVSTEVLKV*NLSKHR Trigger: TCTGTGTTTGGAAAGGTTGCACACCTTAAGGACCTC...AGTGGACACCTGGTACCATAGGCACTCTCTGTACTTAAGAATTGAGGCAAAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| 3UTR-3UTR GCA 90 bp | AGCCTGAGATCCAAGAGCTCTTGTGTCTATCTTCAGTGTTTGTCCATCTTCTTGCCAGGGCAAGCAAGTTaGAAAGTTCACATCTGCCAA | + |
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Preference number: 2 (lower is better) Translates to: SLRSKSSCVYLQCLSIFLPGQAS*KVHICQ Trigger: TTGGCAGATGTGAACTTTGCAACTTGCTTGCCCTGG...CAAGAAGATGGACAAACACTGAAGATAGACACAAGAGCTCTTGGATCTCAGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| 3UTR-3UTR TCA 90 bp | GAGCCTGAGATCCAAGAGCTCTTGTGTCTATCTTCAGTGTTTGTCCATCTTCTTCATGTACTTAAGACATaGGTGTCATTGGTCTCCTCC | + |
|
Preference number: 2 (lower is better) Translates to: EPEIQELLCLSSVFVHLLHVLKT*VSLVSS Trigger: GGAGGAGACCAATGACACTCATGTCTTAAGTACATG...AAGAAGATGGACAAACACTGAAGATAGACACAAGAGCTCTTGGATCTCAGGCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| 3UTR-3UTR GCA 90 bp | GAGCTCTTGTGTCTATCTTCAGTGTTTGTCCATCTTCTTGCTCTTGCCAATCCTGAGGTCCTTAAGGTGTaGAACCTTTCCAAACACAGA | + |
|
Preference number: 2 (lower is better) Translates to: ELLCLSSVFVHLLALANPEVLKV*NLSKHR Trigger: TCTGTGTTTGGAAAGGTTGCACACCTTAAGGACCTC...AGGATTGGCAAGAGCAAGAAGATGGACAAACACTGAAGATAGACACAAGAGCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| 3UTR-3UTR GCA 90 bp | CTTAAACTCATCTTTGCATGCTGCATGAACTTTCTGGGAAGAGGAGGAAAAACAGTGCACAGACTCACATaGTGCCTTGAGAGACAACTC | + |
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Preference number: 2 (lower is better) Translates to: LKLIFACCMNFLGRGGKTVHRLT*CLERQL Trigger: GAGTTGTCTCTCAAGGCAGCATGTGAGTCTGTGCAC...TGTTTTTCCTCCTCTTCCCAGAAAGTTCATGCAGCATGCAAAGATGAGTTTAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGGCCTAGGCAGAGAAGGGGGAATACATTGGAGAGATGTTGGTAAGAAGAGTTGTTACCATAAAACTTaGGTAGTCCCAGAAGAACCA | + |
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Preference number: 2 (lower is better) Translates to: RGLGREGGIHWRDVGKKSCYHKT*VVPEEP Trigger: TGGTTCTTCTGGGACTACCCAAGTTTTATGGTAACA...ACTCTTCTTACCAACATCTCTCCAATGTATTCCCCCTTCTCTGCCTAGGCCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| 3UTR CAA 90 bp | AAGAAGAGCCTGAGATCCAAGAGCTCTTGTGTCTATCTTCAGTGTTaGTCCATCTTCTTGCTCTTGCCAATCCTAGGAATTCCTTCATCT | + |
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Preference number: 2 (lower is better) Translates to: KKSLRSKSSCVYLQC*SIFLLLPILGIPSS Trigger: AGATGAAGGAATTCCTAGGATTGGCAAGAGCAAGAAGATGGACAAACACTGAAGATAGACACAAGAGCTCTTGGATCTCAGGCTCTTCTT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| 3UTR-3UTR TCA 90 bp | GGGAACAGCATAGGATATTACTCAGTCTTTCAGATAACAATTGGTGATGTTGATACCCCAAGAAGAGCCTaGGATCCAAGAGCTCTTGTG | + |
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Preference number: 2 (lower is better) Translates to: GNSIGYYSVFQITIGDVDTPRRA*DPRALV Trigger: CACAAGAGCTCTTGGATCTCAGGCTCTTCTTGGGGT...ATCAACATCACCAATTGTTATCTGAAAGACTGAGTAATATCCTATGCTGTTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| 3UTR-3UTR TCA 90 bp | GGGAACAGCATAGGATATTACTCAGTCTTTCAGATAACAATTGGTGATGTTGATCTGAGTATAGAAGGGTaGCCCCAAGAAGAGCCTGAG | + |
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Preference number: 2 (lower is better) Translates to: GNSIGYYSVFQITIGDVDLSIEG*PQEEPE Trigger: CTCAGGCTCTTCTTGGGGTCACCCTTCTATACTCAG...ATCAACATCACCAATTGTTATCTGAAAGACTGAGTAATATCCTATGCTGTTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| 3UTR-3UTR TCA 90 bp | CTTAAACTCATCTTTGCATGCTGCATGAACTTTCTGGGAAGAGGAGGAAAAACACTGCCTACAAGAGTGTaGATAATGTGTGGGTGGCTA | + |
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Preference number: 2 (lower is better) Translates to: LKLIFACCMNFLGRGGKTLPTRV*IMCGWL Trigger: TAGCCACCCACACATTATTCACACTCTTGTAGGCAG...TGTTTTTCCTCCTCTTCCCAGAAAGTTCATGCAGCATGCAAAGATGAGTTTAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| 3UTR-3UTR GCA 90 bp | CTCTTTGCCTCAATTCTTAAGTACAGAGAGTGCCTATGGTACCAGGTGTCCACTCAGAACTCAGAAAAATaGTGCACTCATGATTGCAGT | + |
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Preference number: 2 (lower is better) Translates to: LFASILKYRECLWYQVSTQNSEK*CTHDCS Trigger: ACTGCAATCATGAGTGCAGCATTTTTCTGAGTTCTG...AGTGGACACCTGGTACCATAGGCACTCTCTGTACTTAAGAATTGAGGCAAAGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| 3UTR-3UTR CCA 90 bp | ACATTTACTTCAATGGGTGCTTACTGCTTAGTTTCAAGTGCTTACATGATTAACCCCAACCCAGTATCATaGAGGGCTAGGCATGGCTTC | + |
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Preference number: 2 (lower is better) Translates to: TFTSMGAYCLVSSAYMINPNPVS*RARHGF Trigger: GAAGCCATGCCTAGCCCTCCATGATACTGGGTTGGG...GTTAATCATGTAAGCACTTGAAACTAAGCAGTAAGCACCCATTGAAGTAAATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| 3UTR-3UTR CCA 90 bp | CTCTTTGCCTCAATTCTTAAGTACAGAGAGTGCCTATGGTACCAGGTGTCCACTTGTTACCATAAAACTTaGGTAGTCCCAGAAGAACCA | + |
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Preference number: 2 (lower is better) Translates to: LFASILKYRECLWYQVSTCYHKT*VVPEEP Trigger: TGGTTCTTCTGGGACTACCCAAGTTTTATGGTAACA...AGTGGACACCTGGTACCATAGGCACTCTCTGTACTTAAGAATTGAGGCAAAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| 3UTR-3UTR CCA 90 bp | TGCTTCTTCATATGTAGAAGTCCATTCTGTGTGGACTCAGGTATAGGCCACAAGGAAGGGGGAATACATTaGAGAGATGTTGGTAAGAAG | + |
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Preference number: 2 (lower is better) Translates to: CFFICRSPFCVDSGIGHKEGGIH*RDVGKK Trigger: CTTCTTACCAACATCTCTCCAATGTATTCCCCCTTC...CTTGTGGCCTATACCTGAGTCCACACAGAATGGACTTCTACATATGAAGAAGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| 3UTR-3UTR TCA 90 bp | CTCTTTGCCTCAATTCTTAAGTACAGAGAGTGCCTATGGTACCAGGTGTCCACTAAAAGCCATGCTGCTTaGGATAAGCAATTCAAATGT | + |
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Preference number: 2 (lower is better) Translates to: LFASILKYRECLWYQVSTKSHAA*DKQFKC Trigger: ACATTTGAATTGCTTATCTCAAGCAGCATGGCTTTT...AGTGGACACCTGGTACCATAGGCACTCTCTGTACTTAAGAATTGAGGCAAAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| 3UTR-3UTR TCA 90 bp | CTTAAACTCATCTTTGCATGCTGCATGAACTTTCTGGGAAGAGGAGGAAAAACAATTTCCATCCCACTTTaGCCAGTTCTTTTCTCCAGC | + |
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Preference number: 2 (lower is better) Translates to: LKLIFACCMNFLGRGGKTISIPL*PVLFSS Trigger: GCTGGAGAAAAGAACTGGTCAAAGTGGGATGGAAAT...TGTTTTTCCTCCTCTTCCCAGAAAGTTCATGCAGCATGCAAAGATGAGTTTAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| 3UTR-3UTR GCA 90 bp | CTTAAACTCATCTTTGCATGCTGCATGAACTTTCTGGGAAGAGGAGGAAAAACAGAGGTCCTTAAGGTGTaGAACCTTTCCAAACACAGA | + |
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Preference number: 2 (lower is better) Translates to: LKLIFACCMNFLGRGGKTEVLKV*NLSKHR Trigger: TCTGTGTTTGGAAAGGTTGCACACCTTAAGGACCTC...TGTTTTTCCTCCTCTTCCCAGAAAGTTCATGCAGCATGCAAAGATGAGTTTAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| 3UTR-3UTR GCA 90 bp | AGAGGCCTAGGCAGAGAAGGGGGAATACATTGGAGAGATGTTGGTAAGAAGAGTAACTCAGAAAAATGCTaGACTCATGATTGCAGTTTA | + |
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Preference number: 2 (lower is better) Translates to: RGLGREGGIHWRDVGKKSNSEKC*THDCSL Trigger: TAAACTGCAATCATGAGTGCAGCATTTTTCTGAGTT...ACTCTTCTTACCAACATCTCTCCAATGTATTCCCCCTTCTCTGCCTAGGCCTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| 3UTR-3UTR GCA 90 bp | GAGCTCTTGTGTCTATCTTCAGTGTTTGTCCATCTTCTTGCTCTTGCCAATCCTCAGAACTCAGAAAAATaGTGCACTCATGATTGCAGT | + |
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Preference number: 2 (lower is better) Translates to: ELLCLSSVFVHLLALANPQNSEK*CTHDCS Trigger: ACTGCAATCATGAGTGCAGCATTTTTCTGAGTTCTG...AGGATTGGCAAGAGCAAGAAGATGGACAAACACTGAAGATAGACACAAGAGCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| 3UTR-3UTR GCA 90 bp | CTTAAACTCATCTTTGCATGCTGCATGAACTTTCTGGGAAGAGGAGGAAAAACAGCATTCATGGCTCTCTaGCTACCTCTTCTGAGTATA | + |
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Preference number: 2 (lower is better) Translates to: LKLIFACCMNFLGRGGKTAFMAL*LPLLSI Trigger: TATACTCAGAAGAGGTAGGCAGAGAGCCATGAATGC...TGTTTTTCCTCCTCTTCCCAGAAAGTTCATGCAGCATGCAAAGATGAGTTTAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGGCCTAGGCAGAGAAGGGGGAATACATTGGAGAGATGTTGGTAAGAAGAGTAGTGAGCAAGAATTCTaGGGAAGAAATGCATATTAT | + |
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Preference number: 2 (lower is better) Translates to: RGLGREGGIHWRDVGKKSSEQEF*GRNAYY Trigger: ATAATATGCATTTCTTCCCCAGAATTCTTGCTCACT...ACTCTTCTTACCAACATCTCTCCAATGTATTCCCCCTTCTCTGCCTAGGCCTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| 3UTR-3UTR CCA 90 bp | TGCTTCTTCATATGTAGAAGTCCATTCTGTGTGGACTCAGGTATAGGCCACAAGCCATCATGTAAATTCTaGAAAGTCAGAGTTCCCTCT | + |
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Preference number: 2 (lower is better) Translates to: CFFICRSPFCVDSGIGHKPSCKF*KVRVPS Trigger: AGAGGGAACTCTGACTTTCCAGAATTTACATGATGG...CTTGTGGCCTATACCTGAGTCCACACAGAATGGACTTCTACATATGAAGAAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| 3UTR CAA 90 bp | AAGACTGCCTACAAGAGTGTGAATAATGTGTGGGTGGCTACATCATaGAAGCATTTCCTTCTACCTGAACAACCAGTACCAGTTTATGTA | + |
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Preference number: 2 (lower is better) Translates to: KTAYKSVNNVWVATS*KHFLLPEQPVPVYV Trigger: TACATAAACTGGTACTGGTTGTTCAGGTAGAAGGAAATGCTTCAATGATGTAGCCACCCACACATTATTCACACTCTTGTAGGCAGTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| 3UTR-3UTR TCA 90 bp | AGCCTGAGATCCAAGAGCTCTTGTGTCTATCTTCAGTGTTTGTCCATCTTCTTGAAAATGCTGCACTCATaGTTGCAGTTTATCATAGAC | + |
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Preference number: 2 (lower is better) Translates to: SLRSKSSCVYLQCLSIFLKMLHS*LQFIID Trigger: GTCTATGATAAACTGCAATCATGAGTGCAGCATTTT...CAAGAAGATGGACAAACACTGAAGATAGACACAAGAGCTCTTGGATCTCAGGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| 3UTR-3UTR TCA 90 bp | TGCTTCTTCATATGTAGAAGTCCATTCTGTGTGGACTCAGGTATAGGCCACAAGAAAATGCTGCACTCATaGTTGCAGTTTATCATAGAC | + |
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Preference number: 2 (lower is better) Translates to: CFFICRSPFCVDSGIGHKKMLHS*LQFIID Trigger: GTCTATGATAAACTGCAATCATGAGTGCAGCATTTT...CTTGTGGCCTATACCTGAGTCCACACAGAATGGACTTCTACATATGAAGAAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| 3UTR-3UTR TCA 90 bp | GGGAACAGCATAGGATATTACTCAGTCTTTCAGATAACAATTGGTGATGTTGATAAGGACAAGTCCTCTTaGTCTAGTGCACAGACTCAC | + |
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Preference number: 2 (lower is better) Translates to: GNSIGYYSVFQITIGDVDKDKSS*SSAQTH Trigger: GTGAGTCTGTGCACTAGATCAAGAGGACTTGTCCTT...ATCAACATCACCAATTGTTATCTGAAAGACTGAGTAATATCCTATGCTGTTCCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| 3UTR-3UTR TCA 90 bp | CTTAAACTCATCTTTGCATGCTGCATGAACTTTCTGGGAAGAGGAGGAAAAACAGCATTTCCTTCTACCTaGACAACCAGTACCAGTTTA | + |
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Preference number: 2 (lower is better) Translates to: LKLIFACCMNFLGRGGKTAFPST*TTSTSL Trigger: TAAACTGGTACTGGTTGTTCAGGTAGAAGGAAATGC...TGTTTTTCCTCCTCTTCCCAGAAAGTTCATGCAGCATGCAAAGATGAGTTTAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| 3UTR-3UTR TCA 90 bp | GGGAACAGCATAGGATATTACTCAGTCTTTCAGATAACAATTGGTGATGTTGATGGGTGGCTACATCATTaGAGCATTTCCTTCTACCTG | + |
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Preference number: 2 (lower is better) Translates to: GNSIGYYSVFQITIGDVDGWLHH*SISFYL Trigger: CAGGTAGAAGGAAATGCTTCAATGATGTAGCCACCC...ATCAACATCACCAATTGTTATCTGAAAGACTGAGTAATATCCTATGCTGTTCCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| 3UTR-3UTR TCA 90 bp | TCATTGAAAACAGATTCTATGTGGCTATTTCTCAAGGATTACTCAGCTTCACAGCTGCCTACAAGAGTGTaGATAATGTGTGGGTGGCTA | + |
|
Preference number: 2 (lower is better) Translates to: SLKTDSMWLFLKDYSASQLPTRV*IMCGWL Trigger: TAGCCACCCACACATTATTCACACTCTTGTAGGCAG...CTGTGAAGCTGAGTAATCCTTGAGAAATAGCCACATAGAATCTGTTTTCAATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| 3UTR-3UTR GCA 90 bp | TCATTGAAAACAGATTCTATGTGGCTATTTCTCAAGGATTACTCAGCTTCACAGTCATGCTCTAACTCCTaGATTCATGGCTCTCTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: SLKTDSMWLFLKDYSASQSCSNS*IHGSLP Trigger: AGGCAGAGAGCCATGAATGCAGGAGTTAGAGCATGA...CTGTGAAGCTGAGTAATCCTTGAGAAATAGCCACATAGAATCTGTTTTCAATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| 3UTR-3UTR TCA 90 bp | TCATTGAAAACAGATTCTATGTGGCTATTTCTCAAGGATTACTCAGCTTCACAGCATGTACTTAAGACATaGGTGTCATTGGTCTCCTCC | + |
|
Preference number: 2 (lower is better) Translates to: SLKTDSMWLFLKDYSASQHVLKT*VSLVSS Trigger: GGAGGAGACCAATGACACTCATGTCTTAAGTACATG...CTGTGAAGCTGAGTAATCCTTGAGAAATAGCCACATAGAATCTGTTTTCAATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| 3UTR-3UTR TCA 90 bp | TCATTGAAAACAGATTCTATGTGGCTATTTCTCAAGGATTACTCAGCTTCACAGATTTCCATCCCACTTTaGCCAGTTCTTTTCTCCAGC | + |
|
Preference number: 2 (lower is better) Translates to: SLKTDSMWLFLKDYSASQISIPL*PVLFSS Trigger: GCTGGAGAAAAGAACTGGTCAAAGTGGGATGGAAAT...CTGTGAAGCTGAGTAATCCTTGAGAAATAGCCACATAGAATCTGTTTTCAATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| 3UTR-3UTR GCA 90 bp | ACATTTACTTCAATGGGTGCTTACTGCTTAGTTTCAAGTGCTTACATGATTAACCCAGGGCAAGCAAGTTaGAAAGTTCACATCTGCCAA | + |
|
Preference number: 2 (lower is better) Translates to: TFTSMGAYCLVSSAYMINPGQAS*KVHICQ Trigger: TTGGCAGATGTGAACTTTGCAACTTGCTTGCCCTGG...GTTAATCATGTAAGCACTTGAAACTAAGCAGTAAGCACCCATTGAAGTAAATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| 3UTR-3UTR CCA 90 bp | AGCCTGAGATCCAAGAGCTCTTGTGTCTATCTTCAGTGTTTGTCCATCTTCTTGAGTGAGCAAGAATTCTaGGGAAGAAATGCATATTAT | + |
|
Preference number: 2 (lower is better) Translates to: SLRSKSSCVYLQCLSIFLSEQEF*GRNAYY Trigger: ATAATATGCATTTCTTCCCCAGAATTCTTGCTCACT...CAAGAAGATGGACAAACACTGAAGATAGACACAAGAGCTCTTGGATCTCAGGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| 3UTR-3UTR CCA 90 bp | GAGCCTGAGATCCAAGAGCTCTTGTGTCTATCTTCAGTGTTTGTCCATCTTCTTAGTGAGCAAGAATTCTaGGGAAGAAATGCATATTAT | + |
|
Preference number: 2 (lower is better) Translates to: EPEIQELLCLSSVFVHLLSEQEF*GRNAYY Trigger: ATAATATGCATTTCTTCCCCAGAATTCTTGCTCACT...AAGAAGATGGACAAACACTGAAGATAGACACAAGAGCTCTTGGATCTCAGGCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| 3UTR-3UTR CCA 90 bp | TCATTGAAAACAGATTCTATGTGGCTATTTCTCAAGGATTACTCAGCTTCACAGAAAAACCAGAAAGACTaGGGAGATGTTGGGAACAGC | + |
|
Preference number: 2 (lower is better) Translates to: SLKTDSMWLFLKDYSASQKNQKD*GDVGNS Trigger: GCTGTTCCCAACATCTCCCCAGTCTTTCTGGTTTTT...CTGTGAAGCTGAGTAATCCTTGAGAAATAGCCACATAGAATCTGTTTTCAATGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| 3UTR-3UTR TCA 90 bp | ACATTTACTTCAATGGGTGCTTACTGCTTAGTTTCAAGTGCTTACATGATTAACCATGTACTTAAGACATaGGTGTCATTGGTCTCCTCC | + |
|
Preference number: 2 (lower is better) Translates to: TFTSMGAYCLVSSAYMINHVLKT*VSLVSS Trigger: GGAGGAGACCAATGACACTCATGTCTTAAGTACATG...GTTAATCATGTAAGCACTTGAAACTAAGCAGTAAGCACCCATTGAAGTAAATGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| 3UTR-3UTR TCA 90 bp | CTTAAACTCATCTTTGCATGCTGCATGAACTTTCTGGGAAGAGGAGGAAAAACAAAAAGCCATGCTGCTTaGGATAAGCAATTCAAATGT | + |
|
Preference number: 2 (lower is better) Translates to: LKLIFACCMNFLGRGGKTKSHAA*DKQFKC Trigger: ACATTTGAATTGCTTATCTCAAGCAGCATGGCTTTT...TGTTTTTCCTCCTCTTCCCAGAAAGTTCATGCAGCATGCAAAGATGAGTTTAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| 3UTR-3UTR TCA 90 bp | ACATTTACTTCAATGGGTGCTTACTGCTTAGTTTCAAGTGCTTACATGATTAACGGCATTTGTTTTGCATaGCCCTGTTTCCCATCTCTA | + |
|
Preference number: 2 (lower is better) Translates to: TFTSMGAYCLVSSAYMINGICFA*PCFPSL Trigger: TAGAGATGGGAAACAGGGTCATGCAAAACAAATGCC...GTTAATCATGTAAGCACTTGAAACTAAGCAGTAAGCACCCATTGAAGTAAATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| 3UTR-3UTR TCA 90 bp | TCATTGAAAACAGATTCTATGTGGCTATTTCTCAAGGATTACTCAGCTTCACAGACTCACATGCTGCCTTaGGAGACAACTCTTGAATTA | + |
|
Preference number: 2 (lower is better) Translates to: SLKTDSMWLFLKDYSASQTHMLP*ETTLEL Trigger: TAATTCAAGAGTTGTCTCTCAAGGCAGCATGTGAGT...CTGTGAAGCTGAGTAATCCTTGAGAAATAGCCACATAGAATCTGTTTTCAATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| 3UTR-3UTR CCA 90 bp | TCATTGAAAACAGATTCTATGTGGCTATTTCTCAAGGATTACTCAGCTTCACAGCAGTTTATGTATCCTTaGGGAAGGACAAGTCCTCTT | + |
|
Preference number: 2 (lower is better) Translates to: SLKTDSMWLFLKDYSASQQFMYP*GRTSPL Trigger: AAGAGGACTTGTCCTTCCCCAAGGATACATAAACTG...CTGTGAAGCTGAGTAATCCTTGAGAAATAGCCACATAGAATCTGTTTTCAATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| 3UTR-3UTR CCA 90 bp | GGGAACAGCATAGGATATTACTCAGTCTTTCAGATAACAATTGGTGATGTTGATGAAGGGGGAATACATTaGAGAGATGTTGGTAAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: GNSIGYYSVFQITIGDVDEGGIH*RDVGKK Trigger: CTTCTTACCAACATCTCTCCAATGTATTCCCCCTTC...ATCAACATCACCAATTGTTATCTGAAAGACTGAGTAATATCCTATGCTGTTCCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| 3UTR CAA 90 bp | TGCTTTAAAAACAACAAATATGAGGAGTACATTTTCCCACTACTCTaGCCAATGTCTGAAACACCTCACACAGCTCTCTTCAATTTCCTT | + |
|
Preference number: 2 (lower is better) Translates to: CFKNNKYEEYIFPLL*PMSETPHTALFNFL Trigger: AAGGAAATTGAAGAGAGCTGTGTGAGGTGTTTCAGACATTGGCAAGAGTAGTGGGAAAATGTACTCCTCATATTTGTTGTTTTTAAAGCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| 3UTR-3UTR TCA 90 bp | ACATTTACTTCAATGGGTGCTTACTGCTTAGTTTCAAGTGCTTACATGATTAACACAGTTACACCTTTCTaGATCCAGAGTCACAAAGGT | + |
|
Preference number: 2 (lower is better) Translates to: TFTSMGAYCLVSSAYMINTVTPF*IQSHKG Trigger: ACCTTTGTGACTCTGGATTCAGAAAGGTGTAACTGT...GTTAATCATGTAAGCACTTGAAACTAAGCAGTAAGCACCCATTGAAGTAAATGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| 3UTR-3UTR TCA 90 bp | ACATTTACTTCAATGGGTGCTTACTGCTTAGTTTCAAGTGCTTACATGATTAACGCATTTCCTTCTACCTaGACAACCAGTACCAGTTTA | + |
|
Preference number: 2 (lower is better) Translates to: TFTSMGAYCLVSSAYMINAFPST*TTSTSL Trigger: TAAACTGGTACTGGTTGTTCAGGTAGAAGGAAATGC...GTTAATCATGTAAGCACTTGAAACTAAGCAGTAAGCACCCATTGAAGTAAATGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| 3UTR-3UTR TCA 90 bp | ACATTTACTTCAATGGGTGCTTACTGCTTAGTTTCAAGTGCTTACATGATTAACCAGCTTTTTCCACCATaGCCAAATTATGCAGTGAGT | + |
|
Preference number: 2 (lower is better) Translates to: TFTSMGAYCLVSSAYMINQLFPP*PNYAVS Trigger: ACTCACTGCATAATTTGGTCATGGTGGAAAAAGCTG...GTTAATCATGTAAGCACTTGAAACTAAGCAGTAAGCACCCATTGAAGTAAATGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| 3UTR-3UTR TCA 90 bp | TCATTGAAAACAGATTCTATGTGGCTATTTCTCAAGGATTACTCAGCTTCACAGATACCACCTATTACTTaGCCAAATCCAGAAGGTAGA | + |
|
Preference number: 2 (lower is better) Translates to: SLKTDSMWLFLKDYSASQIPPIT*PNPEGR Trigger: TCTACCTTCTGGATTTGGTCAAGTAATAGGTGGTAT...CTGTGAAGCTGAGTAATCCTTGAGAAATAGCCACATAGAATCTGTTTTCAATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| 3UTR-3UTR GCA 90 bp | CTTAAACTCATCTTTGCATGCTGCATGAACTTTCTGGGAAGAGGAGGAAAAACAAACTCAGAAAAATGCTaGACTCATGATTGCAGTTTA | + |
|
Preference number: 2 (lower is better) Translates to: LKLIFACCMNFLGRGGKTNSEKC*THDCSL Trigger: TAAACTGCAATCATGAGTGCAGCATTTTTCTGAGTT...TGTTTTTCCTCCTCTTCCCAGAAAGTTCATGCAGCATGCAAAGATGAGTTTAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| 3UTR-3UTR GCA 90 bp | TCATTGAAAACAGATTCTATGTGGCTATTTCTCAAGGATTACTCAGCTTCACAGTTACACAGACATGCATaGAAGCAAAACACCAATGCA | + |
|
Preference number: 2 (lower is better) Translates to: SLKTDSMWLFLKDYSASQLHRHA*KQNTNA Trigger: TGCATTGGTGTTTTGCTTGCATGCATGTCTGTGTAA...CTGTGAAGCTGAGTAATCCTTGAGAAATAGCCACATAGAATCTGTTTTCAATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| 3UTR-3UTR CCA 90 bp | GGGAACAGCATAGGATATTACTCAGTCTTTCAGATAACAATTGGTGATGTTGATCCATCATGTAAATTCTaGAAAGTCAGAGTTCCCTCT | + |
|
Preference number: 2 (lower is better) Translates to: GNSIGYYSVFQITIGDVDPSCKF*KVRVPS Trigger: AGAGGGAACTCTGACTTTCCAGAATTTACATGATGG...ATCAACATCACCAATTGTTATCTGAAAGACTGAGTAATATCCTATGCTGTTCCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| 3UTR-3UTR CCA 90 bp | ACATTTACTTCAATGGGTGCTTACTGCTTAGTTTCAAGTGCTTACATGATTAACCAGTTTATGTATCCTTaGGGAAGGACAAGTCCTCTT | + |
|
Preference number: 2 (lower is better) Translates to: TFTSMGAYCLVSSAYMINQFMYP*GRTSPL Trigger: AAGAGGACTTGTCCTTCCCCAAGGATACATAAACTG...GTTAATCATGTAAGCACTTGAAACTAAGCAGTAAGCACCCATTGAAGTAAATGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| 3UTR-3UTR CCA 90 bp | ACATTTACTTCAATGGGTGCTTACTGCTTAGTTTCAAGTGCTTACATGATTAACAGACTGGGGAGATGTTaGGAACAGCATAGGATATTA | + |
|
Preference number: 2 (lower is better) Translates to: TFTSMGAYCLVSSAYMINRLGRC*EQHRIL Trigger: TAATATCCTATGCTGTTCCCAACATCTCCCCAGTCT...GTTAATCATGTAAGCACTTGAAACTAAGCAGTAAGCACCCATTGAAGTAAATGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| 3UTR CAA 90 bp | TTACCCACAAGTAGATTACAATTTTACAGTACCACCCTGCTGTCTTaGTATGCCTGCCATATGTCATTTAACATTAATCTCCATCTCTAT | + |
|
Preference number: 2 (lower is better) Translates to: LPTSRLQFYSTTLLS*YACHMSFNINLHLY Trigger: ATAGAGATGGAGATTAATGTTAAATGACATATGGCAGGCATACAAAGACAGCAGGGTGGTACTGTAAAATTGTAATCTACTTGTGGGTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| 3UTR CAA 90 bp | TGCATGCTGCATGAACTTTCTGGGAAGAGGAGGAAAAACAAACATTaGTTCTCTTCATATAGGATACTAATAACAGGCCAAAAAGTTGTT | + |
|
Preference number: 2 (lower is better) Translates to: CMLHELSGKRRKNKH*FSSYRILITGQKVV Trigger: AACAACTTTTTGGCCTGTTATTAGTATCCTATATGAAGAGAACAAATGTTTGTTTTTCCTCCTCTTCCCAGAAAGTTCATGCAGCATGCA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| 3UTR-3UTR TCA 90 bp | GGGAACAGCATAGGATATTACTCAGTCTTTCAGATAACAATTGGTGATGTTGATAAAAGCCATGCTGCTTaGGATAAGCAATTCAAATGT | + |
|
Preference number: 2 (lower is better) Translates to: GNSIGYYSVFQITIGDVDKSHAA*DKQFKC Trigger: ACATTTGAATTGCTTATCTCAAGCAGCATGGCTTTT...ATCAACATCACCAATTGTTATCTGAAAGACTGAGTAATATCCTATGCTGTTCCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| 3UTR-3UTR GCA 90 bp | GGGAACAGCATAGGATATTACTCAGTCTTTCAGATAACAATTGGTGATGTTGATTTGGATATTCCTTCATaGTCTAACTCCTGCATTCAT | + |
|
Preference number: 2 (lower is better) Translates to: GNSIGYYSVFQITIGDVDLDIPS*SNSCIH Trigger: ATGAATGCAGGAGTTAGAGCATGAAGGAATATCCAA...ATCAACATCACCAATTGTTATCTGAAAGACTGAGTAATATCCTATGCTGTTCCC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| 3UTR CCA 72 bp | CAGAGTCACAAAGGTGGCCAACCCAACCCAGTATCATaGAGGGCTAGGCATGGCTTCAGGAACTACACTAGT | + |
|
Preference number: 3 (lower is better) Translates to: QSHKGGQPNPVS*RARHGFRNYTS Trigger: ACTAGTGTAGTTCCTGAAGCCATGCCTAGCCCTCCATGATACTGGGTTGGGTTGGCCACCTTTGTGACTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| 3UTR TCA 72 bp | ATGGCTCTCTGCCTACCTCTTCTGAGTATAGAAGGGTaGCCCCAAGAAGAGCCTGAGATCCAAGAGCTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: MALCLPLLSIEG*PQEEPEIQELL Trigger: CAAGAGCTCTTGGATCTCAGGCTCTTCTTGGGGTCACCCTTCTATACTCAGAAGAGGTAGGCAGAGAGCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| 3UTR-3UTR CAA 90 bp | AGAGGCCTAGGCAGAGAAGGGGGAATACATTGGAGAGATGTTGGTAAGAAGAGTACCACCCTGCTGTCTTaGTATGCCTGCCATATGTCA | + |
|
Preference number: 3 (lower is better) Translates to: RGLGREGGIHWRDVGKKSTTLLS*YACHMS Trigger: TGACATATGGCAGGCATACAAAGACAGCAGGGTGGT...ACTCTTCTTACCAACATCTCTCCAATGTATTCCCCCTTCTCTGCCTAGGCCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCTTTGCCTCAATTCTTAAGTACAGAGAGTGCCTATGGTACCAGGTGTCCACTCCCAGGGCAAGCAAGTaGCAAAGTTCACATCTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: LFASILKYRECLWYQVSTPRASK*QSSHLP Trigger: TGGCAGATGTGAACTTTGCAACTTGCTTGCCCTGGG...AGTGGACACCTGGTACCATAGGCACTCTCTGTACTTAAGAATTGAGGCAAAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGCTCTTGTGTCTATCTTCAGTGTTTGTCCATCTTCTTGCTCTTGCCAATCCTCCCAGGGCAAGCAAGTaGCAAAGTTCACATCTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: ELLCLSSVFVHLLALANPPRASK*QSSHLP Trigger: TGGCAGATGTGAACTTTGCAACTTGCTTGCCCTGGG...AGGATTGGCAAGAGCAAGAAGATGGACAAACACTGAAGATAGACACAAGAGCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| 3UTR GCA 72 bp | CTCAAGTGCTTTTTACCAGGCTTGGATATTCCTTCATaGTCTAACTCCTGCATTCATGGCTCTCTGCCTACC | + |
|
Preference number: 3 (lower is better) Translates to: LKCFLPGLDIPS*SNSCIHGSLPT Trigger: GGTAGGCAGAGAGCCATGAATGCAGGAGTTAGAGCATGAAGGAATATCCAAGCCTGGTAAAAAGCACTTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCTTTGCCTCAATTCTTAAGTACAGAGAGTGCCTATGGTACCAGGTGTCCACTTGTTTGTCCATCTTCTaGCTCTTGCCAATCCTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: LFASILKYRECLWYQVSTCLSIF*LLPILG Trigger: TCCTAGGATTGGCAAGAGCAAGAAGATGGACAAACA...AGTGGACACCTGGTACCATAGGCACTCTCTGTACTTAAGAATTGAGGCAAAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| 3UTR-3UTR CAA 90 bp | AGAGGCCTAGGCAGAGAAGGGGGAATACATTGGAGAGATGTTGGTAAGAAGAGTGAGATCCAAGAGCTCTaGTGTCTATCTTCAGTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: RGLGREGGIHWRDVGKKSEIQEL*CLSSVF Trigger: AAACACTGAAGATAGACACAAGAGCTCTTGGATCTC...ACTCTTCTTACCAACATCTCTCCAATGTATTCCCCCTTCTCTGCCTAGGCCTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCTTCTTCATATGTAGAAGTCCATTCTGTGTGGACTCAGGTATAGGCCACAAGCCAGTTTATGTATCCTaGGGGAAGGACAAGTCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: CFFICRSPFCVDSGIGHKPVYVS*GKDKSS Trigger: AGAGGACTTGTCCTTCCCCAAGGATACATAAACTGG...CTTGTGGCCTATACCTGAGTCCACACAGAATGGACTTCTACATATGAAGAAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| 3UTR GCA 72 bp | TTACCAGGCTTGGATATTCCTTCATGCTCTAACTCCTaGATTCATGGCTCTCTGCCTACCTCTTCTGAGTAT | + |
|
Preference number: 3 (lower is better) Translates to: LPGLDIPSCSNS*IHGSLPTSSEY Trigger: ATACTCAGAAGAGGTAGGCAGAGAGCCATGAATGCAGGAGTTAGAGCATGAAGGAATATCCAAGCCTGGTAA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| 3UTR CCA 72 bp | TTCTACCTGAACAACCAGTACCAGTTTATGTATCCTTaGGGAAGGACAAGTCCTCTTGATCTAGTGCACAGA | + |
|
Preference number: 3 (lower is better) Translates to: FYLNNQYQFMYP*GRTSPLDLVHR Trigger: TCTGTGCACTAGATCAAGAGGACTTGTCCTTCCCCAAGGATACATAAACTGGTACTGGTTGTTCAGGTAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| 3UTR-3UTR CAA 90 bp | AGAGGCCTAGGCAGAGAAGGGGGAATACATTGGAGAGATGTTGGTAAGAAGAGTATATATTTCAAGAACTaGGTCCCATTTCTCTGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: RGLGREGGIHWRDVGKKSIYFKN*VPFLCP Trigger: AGGACAGAGAAATGGGACCAAGTTCTTGAAATATAT...ACTCTTCTTACCAACATCTCTCCAATGTATTCCCCCTTCTCTGCCTAGGCCTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGAACAGCATAGGATATTACTCAGTCTTTCAGATAACAATTGGTGATGTTGATCCCAGGGCAAGCAAGTaGCAAAGTTCACATCTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: GNSIGYYSVFQITIGDVDPRASK*QSSHLP Trigger: TGGCAGATGTGAACTTTGCAACTTGCTTGCCCTGGG...ATCAACATCACCAATTGTTATCTGAAAGACTGAGTAATATCCTATGCTGTTCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCCTGAGATCCAAGAGCTCTTGTGTCTATCTTCAGTGTTTGTCCATCTTCTTGGTCAGAGTTCCCTCTTaGGGGTTTTTAATCCCATTA | + |
|
Preference number: 3 (lower is better) Translates to: SLRSKSSCVYLQCLSIFLVRVPS*GFLIPL Trigger: TAATGGGATTAAAAACCCCAAAGAGGGAACTCTGAC...CAAGAAGATGGACAAACACTGAAGATAGACACAAGAGCTCTTGGATCTCAGGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGCTCTTGTGTCTATCTTCAGTGTTTGTCCATCTTCTTGCTCTTGCCAATCCTTATTTCCATCCCACTTaGACCAGTTCTTTTCTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: ELLCLSSVFVHLLALANPYFHPT*TSSFLQ Trigger: CTGGAGAAAAGAACTGGTCAAAGTGGGATGGAAATA...AGGATTGGCAAGAGCAAGAAGATGGACAAACACTGAAGATAGACACAAGAGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCTTCTTCATATGTAGAAGTCCATTCTGTGTGGACTCAGGTATAGGCCACAAGTGCTTTTTACCAGGCTaGGATATTCCTTCATGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: CFFICRSPFCVDSGIGHKCFLPG*DIPSCS Trigger: AGAGCATGAAGGAATATCCAAGCCTGGTAAAAAGCA...CTTGTGGCCTATACCTGAGTCCACACAGAATGGACTTCTACATATGAAGAAGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCTTCTTCATATGTAGAAGTCCATTCTGTGTGGACTCAGGTATAGGCCACAAGTTGATGGCATTTGTTTaGCATGACCCTGTTTCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: CFFICRSPFCVDSGIGHKLMAFV*HDPVSH Trigger: ATGGGAAACAGGGTCATGCAAAACAAATGCCATCAA...CTTGTGGCCTATACCTGAGTCCACACAGAATGGACTTCTACATATGAAGAAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| 3UTR TCA 72 bp | AAGCAAGTTGCAAAGTTCACATCTGCCAAGAAGGAATaGACAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: KQVAKFTSAKKE*TKEGRKEGRKE Trigger: TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTGTTCATTCCTTCTTGGCAGATGTGAACTTTGCAACTTGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGAACTACACTAGTGAGCAAGAATTCTGGGGAAGAAATGCATATTATCTTAAGACCACCCTGCTGTCTTaGTATGCCTGCCATATGTCA | + |
|
Preference number: 3 (lower is better) Translates to: RNYTSEQEFWGRNAYYLKTTLLS*YACHMS Trigger: TGACATATGGCAGGCATACAAAGACAGCAGGGTGGT...CTTAAGATAATATGCATTTCTTCCCCAGAATTCTTGCTCACTAGTGTAGTTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| 3UTR CCA 72 bp | ACTTGGGTAGTCCCAGAAGAACCATCATGTAAATTCTaGAAAGTCAGAGTTCCCTCTTTGGGGTTTTTAATC | + |
|
Preference number: 3 (lower is better) Translates to: TWVVPEEPSCKF*KVRVPSLGFLI Trigger: GATTAAAAACCCCAAAGAGGGAACTCTGACTTTCCAGAATTTACATGATGGTTCTTCTGGGACTACCCAAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGCCTGAGATCCAAGAGCTCTTGTGTCTATCTTCAGTGTTTGTCCATCTTCTTATATATTTCAAGAACTaGGTCCCATTTCTCTGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: EPEIQELLCLSSVFVHLLIYFKN*VPFLCP Trigger: AGGACAGAGAAATGGGACCAAGTTCTTGAAATATAT...AAGAAGATGGACAAACACTGAAGATAGACACAAGAGCTCTTGGATCTCAGGCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGCCTGAGATCCAAGAGCTCTTGTGTCTATCTTCAGTGTTTGTCCATCTTCTTCATAATTTCATTACTTaGGGGTTTTGGTCTTGTAGC | + |
|
Preference number: 3 (lower is better) Translates to: EPEIQELLCLSSVFVHLLHNFIT*GFWSCS Trigger: GCTACAAGACCAAAACCCCAAAGTAATGAAATTATG...AAGAAGATGGACAAACACTGAAGATAGACACAAGAGCTCTTGGATCTCAGGCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTAAACTCATCTTTGCATGCTGCATGAACTTTCTGGGAAGAGGAGGAAAAACAGTCTATCTTCAGTGTTaGTCCATCTTCTTGCTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: LKLIFACCMNFLGRGGKTVYLQC*SIFLLL Trigger: CAAGAGCAAGAAGATGGACAAACACTGAAGATAGAC...TGTTTTTCCTCCTCTTCCCAGAAAGTTCATGCAGCATGCAAAGATGAGTTTAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTAAACTCATCTTTGCATGCTGCATGAACTTTCTGGGAAGAGGAGGAAAAACATTGATGGCATTTGTTTaGCATGACCCTGTTTCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: LKLIFACCMNFLGRGGKTLMAFV*HDPVSH Trigger: ATGGGAAACAGGGTCATGCAAAACAAATGCCATCAA...TGTTTTTCCTCCTCTTCCCAGAAAGTTCATGCAGCATGCAAAGATGAGTTTAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTAAACTCATCTTTGCATGCTGCATGAACTTTCTGGGAAGAGGAGGAAAAACACCAAGAAACTTAGTGTaGCTTATAGGATCATGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: LKLIFACCMNFLGRGGKTPRNLV*LIGSCV Trigger: CACACATGATCCTATAAGCAACACTAAGTTTCTTGG...TGTTTTTCCTCCTCTTCCCAGAAAGTTCATGCAGCATGCAAAGATGAGTTTAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| 3UTR GCA 72 bp | AGAATTCTCTTTTGTATTTGCCAGTCTGATGCACCATaGTTCTTCATATGTAGAAGTCCATTCTGTGTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: RILFCICQSDAP*FFICRSPFCVD Trigger: GTCCACACAGAATGGACTTCTACATATGAAGAAGCATGGTGCATCAGACTGGCAAATACAAAAGAGAATTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGAACAGCATAGGATATTACTCAGTCTTTCAGATAACAATTGGTGATGTTGATGTCAGAGTTCCCTCTTaGGGGTTTTTAATCCCATTA | + |
|
Preference number: 3 (lower is better) Translates to: GNSIGYYSVFQITIGDVDVRVPS*GFLIPL Trigger: TAATGGGATTAAAAACCCCAAAGAGGGAACTCTGAC...ATCAACATCACCAATTGTTATCTGAAAGACTGAGTAATATCCTATGCTGTTCCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| 3UTR-3UTR CAA 90 bp | TCATTGAAAACAGATTCTATGTGGCTATTTCTCAAGGATTACTCAGCTTCACAGTGCTTTTTACCAGGCTaGGATATTCCTTCATGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: SLKTDSMWLFLKDYSASQCFLPG*DIPSCS Trigger: AGAGCATGAAGGAATATCCAAGCCTGGTAAAAAGCA...CTGTGAAGCTGAGTAATCCTTGAGAAATAGCCACATAGAATCTGTTTTCAATGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| 3UTR-3UTR CAA 90 bp | TCATTGAAAACAGATTCTATGTGGCTATTTCTCAAGGATTACTCAGCTTCACAGTTGATGGCATTTGTTTaGCATGACCCTGTTTCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: SLKTDSMWLFLKDYSASQLMAFV*HDPVSH Trigger: ATGGGAAACAGGGTCATGCAAAACAAATGCCATCAA...CTGTGAAGCTGAGTAATCCTTGAGAAATAGCCACATAGAATCTGTTTTCAATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| 3UTR GCA 72 bp | TACCCACAAGTAGATTACAATTTTACAGTACCACCCTaGTGTCTTTGTATGCCTGCCATATGTCATTTAACA | + |
|
Preference number: 3 (lower is better) Translates to: YPQVDYNFTVPP*CLCMPAICHLT Trigger: TGTTAAATGACATATGGCAGGCATACAAAGACAGCAGGGTGGTACTGTAAAATTGTAATCTACTTGTGGGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| 3UTR GCA 72 bp | ATTACAGAAGCTCTTCTTAAACTCATCTTTGCATGCTaGATGAACTTTCTGGGAAGAGGAGGAAAAACAAAC | + |
|
Preference number: 3 (lower is better) Translates to: ITEALLKLIFAC*MNFLGRGGKTN Trigger: GTTTGTTTTTCCTCCTCTTCCCAGAAAGTTCATGCAGCATGCAAAGATGAGTTTAAGAAGAGCTTCTGTAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| 3UTR-3UTR CAA 90 bp | ACATTTACTTCAATGGGTGCTTACTGCTTAGTTTCAAGTGCTTACATGATTAACGTCTATCTTCAGTGTTaGTCCATCTTCTTGCTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: TFTSMGAYCLVSSAYMINVYLQC*SIFLLL Trigger: CAAGAGCAAGAAGATGGACAAACACTGAAGATAGAC...GTTAATCATGTAAGCACTTGAAACTAAGCAGTAAGCACCCATTGAAGTAAATGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| 3UTR-3UTR CAA 90 bp | TCATTGAAAACAGATTCTATGTGGCTATTTCTCAAGGATTACTCAGCTTCACAGAGAAAGAAAAGGGATTaGGAGAGTTGGCTTATTGGT | + |
|
Preference number: 3 (lower is better) Translates to: SLKTDSMWLFLKDYSASQRKKRD*ESWLIG Trigger: ACCAATAAGCCAACTCTCCAAATCCCTTTTCTTTCT...CTGTGAAGCTGAGTAATCCTTGAGAAATAGCCACATAGAATCTGTTTTCAATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| 3UTR GCA 72 bp | TTAACAAACCCTGAGCTAAGAATTCTCTTTTGTATTTaGCAGTCTGATGCACCATGCTTCTTCATATGTAGA | + |
|
Preference number: 3 (lower is better) Translates to: LTNPELRILFCI*QSDAPCFFICR Trigger: TCTACATATGAAGAAGCATGGTGCATCAGACTGGCAAATACAAAAGAGAATTCTTAGCTCAGGGTTTGTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| 3UTR-3UTR CAA 90 bp | ACATTTACTTCAATGGGTGCTTACTGCTTAGTTTCAAGTGCTTACATGATTAACCCAAGAAACTTAGTGTaGCTTATAGGATCATGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: TFTSMGAYCLVSSAYMINPRNLV*LIGSCV Trigger: CACACATGATCCTATAAGCAACACTAAGTTTCTTGG...GTTAATCATGTAAGCACTTGAAACTAAGCAGTAAGCACCCATTGAAGTAAATGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| 3UTR TCA 72 bp | ACAGATGTTCAAACATGTGATCCTCATATTGAGTGCTaGGTTTCTACTGAGACTTCCTTACATAATTTCATT | + |
|
Preference number: 3 (lower is better) Translates to: TDVQTCDPHIEC*VSTETSLHNFI Trigger: AATGAAATTATGTAAGGAAGTCTCAGTAGAAACTCAGCACTCAATATGAGGATCACATGTTTGAACATCTGT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| CDS-3UTR TCA 90 bp | GAGCCTGAGATCCAAGAGCTCTTGTGTCTATCTTCAGTGTTTGTCCATCTTCTTACTCATGGAGGAGGCTaGTGCTGTGGCAGGGCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: EPEIQELLCLSSVFVHLLTHGGG*CCGRAD Trigger: ATCCGCCCTGCCACAGCATCAGCCTCCTCCATGAGT...AAGAAGATGGACAAACACTGAAGATAGACACAAGAGCTCTTGGATCTCAGGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| CDS-3UTR GCA 90 bp | AGAGGCCTAGGCAGAGAAGGGGGAATACATTGGAGAGATGTTGGTAAGAAGAGTCAGCACTGGGGTGACTaGACTGTAGATGATGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RGLGREGGIHWRDVGKKSQHWGD*TVDDGH Trigger: GTGGCCATCATCTACAGTGCAGTCACCCCAGTGCTG...ACTCTTCTTACCAACATCTCTCCAATGTATTCCCCCTTCTCTGCCTAGGCCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| CDS-3UTR TCA 90 bp | TGCTTCTTCATATGTAGAAGTCCATTCTGTGTGGACTCAGGTATAGGCCACAAGAATAGGAGAGGAGTATaGGGAGGAAGGCCCCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: CFFICRSPFCVDSGIGHKNRRGV*GGRPPW Trigger: CCATGGGGGCCTTCCTCCTCATACTCCTCTCCTATT...CTTGTGGCCTATACCTGAGTCCACACAGAATGGACTTCTACATATGAAGAAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| CDS-3UTR TCA 90 bp | CTTAAACTCATCTTTGCATGCTGCATGAACTTTCTGGGAAGAGGAGGAAAAACAACTCATGGAGGAGGCTaGTGCTGTGGCAGGGCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LKLIFACCMNFLGRGGKTTHGGG*CCGRAD Trigger: ATCCGCCCTGCCACAGCATCAGCCTCCTCCATGAGT...TGTTTTTCCTCCTCTTCCCAGAAAGTTCATGCAGCATGCAAAGATGAGTTTAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| CDS-3UTR TCA 90 bp | CTCTTTGCCTCAATTCTTAAGTACAGAGAGTGCCTATGGTACCAGGTGTCCACTTCAAGTGAGCAGTCATaGCAGAATGCAGCAGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LFASILKYRECLWYQVSTSSEQS*QNAAEH Trigger: ATGCTCTGCTGCATTCTGTCATGACTGCTCACTTGA...AGTGGACACCTGGTACCATAGGCACTCTCTGTACTTAAGAATTGAGGCAAAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| CDS-3UTR TCA 90 bp | AGAGGCCTAGGCAGAGAAGGGGGAATACATTGGAGAGATGTTGGTAAGAAGAGTCTTCTAAGAGGGGCTTaGCATCACAGAAGAAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: RGLGREGGIHWRDVGKKSLLRGA*HHRRND Trigger: GTCATTTCTTCTGTGATGTCAAGCCCCTCTTAGAAG...ACTCTTCTTACCAACATCTCTCCAATGTATTCCCCCTTCTCTGCCTAGGCCTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| CDS-3UTR TCA 90 bp | AGAGGCCTAGGCAGAGAAGGGGGAATACATTGGAGAGATGTTGGTAAGAAGAGTAAAGAAGCCATTGGTTaGGAACTGTATTGCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: RGLGREGGIHWRDVGKKSKEAIG*ELYCHR Trigger: CCTGTGGCAATACAGTTCTCAACCAATGGCTTCTTT...ACTCTTCTTACCAACATCTCTCCAATGTATTCCCCCTTCTCTGCCTAGGCCTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| CDS-3UTR TCA 90 bp | CTCTTTGCCTCAATTCTTAAGTACAGAGAGTGCCTATGGTACCAGGTGTCCACTAGAAGTAGAGCTGAGTaGTGCAGCCTAGGAATGATA | + |
|
Preference number: 4 (lower is better) Translates to: LFASILKYRECLWYQVSTRSRAE*CSLGMI Trigger: TATCATTCCTAGGCTGCATCACTCAGCTCTACTTCT...AGTGGACACCTGGTACCATAGGCACTCTCTGTACTTAAGAATTGAGGCAAAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| CDS-3UTR TCA 90 bp | AGCCTGAGATCCAAGAGCTCTTGTGTCTATCTTCAGTGTTTGTCCATCTTCTTGTCAAGTGAGCAGTCATaGCAGAATGCAGCAGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SLRSKSSCVYLQCLSIFLSSEQS*QNAAEH Trigger: ATGCTCTGCTGCATTCTGTCATGACTGCTCACTTGA...CAAGAAGATGGACAAACACTGAAGATAGACACAAGAGCTCTTGGATCTCAGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| CDS-3UTR TCA 90 bp | AGAGGCCTAGGCAGAGAAGGGGGAATACATTGGAGAGATGTTGGTAAGAAGAGTCACAGAAGAAATGACTaGGTTTGTGAGAGTGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RGLGREGGIHWRDVGKKSHRRND*VCESGK Trigger: TTTGCCACTCTCACAAACTCAGTCATTTCTTCTGTG...ACTCTTCTTACCAACATCTCTCCAATGTATTCCCCCTTCTCTGCCTAGGCCTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| CDS-3UTR CCA 90 bp | GAGCCTGAGATCCAAGAGCTCTTGTGTCTATCTTCAGTGTTTGTCCATCTTCTTGCAGCTTTTGAACACTaGTCAGGCCAAGCAAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: EPEIQELLCLSSVFVHLLAAFEH*SGQARE Trigger: TTCTCTTGCTTGGCCTGACCAGTGTTCAAAAGCTGC...AAGAAGATGGACAAACACTGAAGATAGACACAAGAGCTCTTGGATCTCAGGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| CDS-3UTR CCA 90 bp | GAGCTCTTGTGTCTATCTTCAGTGTTTGTCCATCTTCTTGCTCTTGCCAATCCTGCAGCTTTTGAACACTaGTCAGGCCAAGCAAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ELLCLSSVFVHLLALANPAAFEH*SGQARE Trigger: TTCTCTTGCTTGGCCTGACCAGTGTTCAAAAGCTGC...AGGATTGGCAAGAGCAAGAAGATGGACAAACACTGAAGATAGACACAAGAGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| 3UTR CAA 72 bp | CGTAGTGCCTACTGGTCAACCTATTTCCATCCCACTTaGACCAGTTCTTTTCTCCAGCCTTTGATATCCACT | + |
|
Preference number: 4 (lower is better) Translates to: RSAYWSTYFHPT*TSSFLQPLIST Trigger: AGTGGATATCAAAGGCTGGAGAAAAGAACTGGTCAAAGTGGGATGGAAATAGGTTGACCAGTAGGCACTACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| CDS-3UTR TCA 90 bp | GAGCCTGAGATCCAAGAGCTCTTGTGTCTATCTTCAGTGTTTGTCCATCTTCTTAACAGGATGCACAACTaGGGATTCATGATAGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: EPEIQELLCLSSVFVHLLNRMHN*GFMIAV Trigger: CACTGCTATCATGAATCCTCAGTTGTGCATCCTGTT...AAGAAGATGGACAAACACTGAAGATAGACACAAGAGCTCTTGGATCTCAGGCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| CDS-3UTR TCA 90 bp | GAGCCTGAGATCCAAGAGCTCTTGTGTCTATCTTCAGTGTTTGTCCATCTTCTTCTTCTAAGAGGGGCTTaGCATCACAGAAGAAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: EPEIQELLCLSSVFVHLLLLRGA*HHRRND Trigger: GTCATTTCTTCTGTGATGTCAAGCCCCTCTTAGAAG...AAGAAGATGGACAAACACTGAAGATAGACACAAGAGCTCTTGGATCTCAGGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| CDS-3UTR TCA 90 bp | TGCTTCTTCATATGTAGAAGTCCATTCTGTGTGGACTCAGGTATAGGCCACAAGCTTCTAAGAGGGGCTTaGCATCACAGAAGAAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: CFFICRSPFCVDSGIGHKLLRGA*HHRRND Trigger: GTCATTTCTTCTGTGATGTCAAGCCCCTCTTAGAAG...CTTGTGGCCTATACCTGAGTCCACACAGAATGGACTTCTACATATGAAGAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| CDS-3UTR TCA 90 bp | TCATTGAAAACAGATTCTATGTGGCTATTTCTCAAGGATTACTCAGCTTCACAGAATAGGAGAGGAGTATaGGGAGGAAGGCCCCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: SLKTDSMWLFLKDYSASQNRRGV*GGRPPW Trigger: CCATGGGGGCCTTCCTCCTCATACTCCTCTCCTATT...CTGTGAAGCTGAGTAATCCTTGAGAAATAGCCACATAGAATCTGTTTTCAATGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| CDS-3UTR GCA 90 bp | AGGAACTACACTAGTGAGCAAGAATTCTGGGGAAGAAATGCATATTATCTTAAGCAGCACTGGGGTGACTaGACTGTAGATGATGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RNYTSEQEFWGRNAYYLKQHWGD*TVDDGH Trigger: GTGGCCATCATCTACAGTGCAGTCACCCCAGTGCTG...CTTAAGATAATATGCATTTCTTCCCCAGAATTCTTGCTCACTAGTGTAGTTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| CDS-3UTR TCA 90 bp | CTCTTTGCCTCAATTCTTAAGTACAGAGAGTGCCTATGGTACCAGGTGTCCACTACAGAAGAAAGGCAATaGTGTAGAAATAGGAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LFASILKYRECLWYQVSTTEERQ*CRNRRG Trigger: TCCTCTCCTATTTCTACATCATTGCCTTTCTTCTGT...AGTGGACACCTGGTACCATAGGCACTCTCTGTACTTAAGAATTGAGGCAAAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
||
| CDS-3UTR GCA 90 bp | CAAGTTAGTGTCAGCAAGTCCCAAGTCTCAATATCTAATCATAAAAGTTTTCTGCAGCACTGGGGTGACTaGACTGTAGATGATGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QVSVSKSQVSISNHKSFLQHWGD*TVDDGH Trigger: GTGGCCATCATCTACAGTGCAGTCACCCCAGTGCTG...CAGAAAACTTTTATGATTAGATATTGAGACTTGGGACTTGCTGACACTAACTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| 3UTR CAA 72 bp | CTGAGATCCAAGAGCTCTTGTGTCTATCTTCAGTGTTaGTCCATCTTCTTGCTCTTGCCAATCCTAGGAATT | + |
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Preference number: 4 (lower is better) Translates to: LRSKSSCVYLQC*SIFLLLPILGI Trigger: AATTCCTAGGATTGGCAAGAGCAAGAAGATGGACAAACACTGAAGATAGACACAAGAGCTCTTGGATCTCAG 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| 3UTR CAA 72 bp | TACAAGAGTGTGAATAATGTGTGGGTGGCTACATCATaGAAGCATTTCCTTCTACCTGAACAACCAGTACCA | + |
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Preference number: 4 (lower is better) Translates to: YKSVNNVWVATS*KHFLLPEQPVP Trigger: TGGTACTGGTTGTTCAGGTAGAAGGAAATGCTTCAATGATGTAGCCACCCACACATTATTCACACTCTTGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| 3UTR CAA 72 bp | CCCAGAATTGAACTTGGTAAGCCAAGAAACTTAGTGTaGCTTATAGGATCATGTGTGAAGACTGCCTACAAG | + |
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Preference number: 4 (lower is better) Translates to: PRIELGKPRNLV*LIGSCVKTAYK Trigger: CTTGTAGGCAGTCTTCACACATGATCCTATAAGCAACACTAAGTTTCTTGGCTTACCAAGTTCAATTCTGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| 3UTR CAA 72 bp | AACAACAAATATGAGGAGTACATTTTCCCACTACTCTaGCCAATGTCTGAAACACCTCACACAGCTCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: NNKYEEYIFPLL*PMSETPHTALF Trigger: GAAGAGAGCTGTGTGAGGTGTTTCAGACATTGGCAAGAGTAGTGGGAAAATGTACTCCTCATATTTGTTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| CDS-3UTR CCA 90 bp | AGGAACTACACTAGTGAGCAAGAATTCTGGGGAAGAAATGCATATTATCTTAAGGCAGCTTTTGAACACTaGTCAGGCCAAGCAAGAGAA | + |
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Preference number: 4 (lower is better) Translates to: RNYTSEQEFWGRNAYYLKAAFEH*SGQARE Trigger: TTCTCTTGCTTGGCCTGACCAGTGTTCAAAAGCTGC...CTTAAGATAATATGCATTTCTTCCCCAGAATTCTTGCTCACTAGTGTAGTTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| CDS-3UTR TCA 90 bp | AGGAACTACACTAGTGAGCAAGAATTCTGGGGAAGAAATGCATATTATCTTAAGAACAGGATGCACAACTaGGGATTCATGATAGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: RNYTSEQEFWGRNAYYLKNRMHN*GFMIAV Trigger: CACTGCTATCATGAATCCTCAGTTGTGCATCCTGTT...CTTAAGATAATATGCATTTCTTCCCCAGAATTCTTGCTCACTAGTGTAGTTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| CDS-3UTR TCA 90 bp | ACATTTACTTCAATGGGTGCTTACTGCTTAGTTTCAAGTGCTTACATGATTAACAGAAGTAGAGCTGAGTaGTGCAGCCTAGGAATGATA | + |
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Preference number: 4 (lower is better) Translates to: TFTSMGAYCLVSSAYMINRSRAE*CSLGMI Trigger: TATCATTCCTAGGCTGCATCACTCAGCTCTACTTCT...GTTAATCATGTAAGCACTTGAAACTAAGCAGTAAGCACCCATTGAAGTAAATGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| CDS-3UTR TCA 90 bp | CAAGTTAGTGTCAGCAAGTCCCAAGTCTCAATATCTAATCATAAAAGTTTTCTGAGAAGTAGAGCTGAGTaGTGCAGCCTAGGAATGATA | + |
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Preference number: 4 (lower is better) Translates to: QVSVSKSQVSISNHKSFLRSRAE*CSLGMI Trigger: TATCATTCCTAGGCTGCATCACTCAGCTCTACTTCT...CAGAAAACTTTTATGATTAGATATTGAGACTTGGGACTTGCTGACACTAACTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| CDS-3UTR TCA 90 bp | AGGAACTACACTAGTGAGCAAGAATTCTGGGGAAGAAATGCATATTATCTTAAGCACAGAAGAAATGACTaGGTTTGTGAGAGTGGCAAA | + |
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Preference number: 4 (lower is better) Translates to: RNYTSEQEFWGRNAYYLKHRRND*VCESGK Trigger: TTTGCCACTCTCACAAACTCAGTCATTTCTTCTGTG...CTTAAGATAATATGCATTTCTTCCCCAGAATTCTTGCTCACTAGTGTAGTTCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| CDS-3UTR TCA 90 bp | ACATTTACTTCAATGGGTGCTTACTGCTTAGTTTCAAGTGCTTACATGATTAACAAAGAAGCCATTGGTTaGGAACTGTATTGCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: TFTSMGAYCLVSSAYMINKEAIG*ELYCHR Trigger: CCTGTGGCAATACAGTTCTCAACCAATGGCTTCTTT...GTTAATCATGTAAGCACTTGAAACTAAGCAGTAAGCACCCATTGAAGTAAATGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| CDS-3UTR TCA 90 bp | ACATTTACTTCAATGGGTGCTTACTGCTTAGTTTCAAGTGCTTACATGATTAACCACAGAAGAAATGACTaGGTTTGTGAGAGTGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: TFTSMGAYCLVSSAYMINHRRND*VCESGK Trigger: TTTGCCACTCTCACAAACTCAGTCATTTCTTCTGTG...GTTAATCATGTAAGCACTTGAAACTAAGCAGTAAGCACCCATTGAAGTAAATGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| CDS-3UTR CCA 90 bp | TCATTGAAAACAGATTCTATGTGGCTATTTCTCAAGGATTACTCAGCTTCACAGACAGAAAGAAGCCATTaGTTGAGAACTGTATTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLKTDSMWLFLKDYSASQTERSH*LRTVLP Trigger: TGGCAATACAGTTCTCAACCAATGGCTTCTTTCTGT...CTGTGAAGCTGAGTAATCCTTGAGAAATAGCCACATAGAATCTGTTTTCAATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| 3UTR CAA 72 bp | TTTTCTGTCATAACCAATCTTCCATCTGAGATTTGCTaGGAGCCTACCATAAAACCGGTTGTTAATATAGAC | + |
|
Preference number: 4 (lower is better) Translates to: FSVITNLPSEIC*EPTIKPVVNID Trigger: GTCTATATTAACAACCGGTTTTATGGTAGGCTCCAAGCAAATCTCAGATGGAAGATTGGTTATGACAGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| 3UTR CAA 72 bp | TTCCAAACACAGATGTTCAAACATGTGATCCTCATATaGAGTGCTGAGTTTCTACTGAGACTTCCTTACATA | + |
|
Preference number: 4 (lower is better) Translates to: FQTQMFKHVILI*SAEFLLRLPYI Trigger: TATGTAAGGAAGTCTCAGTAGAAACTCAGCACTCAATATGAGGATCACATGTTTGAACATCTGTGTTTGGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| CDS-3UTR TCA 90 bp | ACATTTACTTCAATGGGTGCTTACTGCTTAGTTTCAAGTGCTTACATGATTAACACAGAAGAAAGGCAATaGTGTAGAAATAGGAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TFTSMGAYCLVSSAYMINTEERQ*CRNRRG Trigger: TCCTCTCCTATTTCTACATCATTGCCTTTCTTCTGT...GTTAATCATGTAAGCACTTGAAACTAAGCAGTAAGCACCCATTGAAGTAAATGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| CDS-3UTR TCA 90 bp | CAAGTTAGTGTCAGCAAGTCCCAAGTCTCAATATCTAATCATAAAAGTTTTCTGACAGAAGAAAGGCAATaGTGTAGAAATAGGAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QVSVSKSQVSISNHKSFLTEERQ*CRNRRG Trigger: TCCTCTCCTATTTCTACATCATTGCCTTTCTTCTGT...CAGAAAACTTTTATGATTAGATATTGAGACTTGGGACTTGCTGACACTAACTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| CDS-3UTR CCA 90 bp | CAAGTTAGTGTCAGCAAGTCCCAAGTCTCAATATCTAATCATAAAAGTTTTCTGACAGAAAGAAGCCATTaGTTGAGAACTGTATTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QVSVSKSQVSISNHKSFLTERSH*LRTVLP Trigger: TGGCAATACAGTTCTCAACCAATGGCTTCTTTCTGT...CAGAAAACTTTTATGATTAGATATTGAGACTTGGGACTTGCTGACACTAACTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| CDS TCA 90 bp | ACTGTAGATGATGGCCACCACCCGATCCTCACTCATGGAGGAGGCTaGTGCTGTGGCAGGGCGGATGTATGTGAAACCAACAGGACCATA | + |
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Preference number: 5 (lower is better) Translates to: TVDDGHHPILTHGGG*CCGRADVCETNRTI Trigger: TATGGTCCTGTTGGTTTCACATACATCCGCCCTGCCACAGCATCAGCCTCCTCCATGAGTGAGGATCGGGTGGTGGCCATCATCTACAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031086.5 ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| CDS TCA 90 bp | AGATGGCCTCCGTACTTCCCAGAAAGTGAAAGAAGTAGAGCTGAGTaGTGCAGCCTAGGAATGATATGGCCCTACGCCTCGAGAGAAGGT | + |
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Preference number: 5 (lower is better) Translates to: RWPPYFPESERSRAE*CSLGMIWPYASREG Trigger: ACCTTCTCTCGAGGCGTAGGGCCATATCATTCCTAGGCTGCATCACTCAGCTCTACTTCTTTCACTTTCTGGGAAGTACGGAGGCCATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031086.5 ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| CDS-3UTR CAA 90 bp | AGAGGCCTAGGCAGAGAAGGGGGAATACATTGGAGAGATGTTGGTAAGAAGAGTGATGGGCTGCAGCTTTaGAACACTGGTCAGGCCAAG | + |
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Preference number: 5 (lower is better) Translates to: RGLGREGGIHWRDVGKKSDGLQL*NTGQAK Trigger: CTTGGCCTGACCAGTGTTCAAAAGCTGCAGCCCATC...ACTCTTCTTACCAACATCTCTCCAATGTATTCCCCCTTCTCTGCCTAGGCCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| CDS-3UTR CAA 90 bp | AGCCTGAGATCCAAGAGCTCTTGTGTCTATCTTCAGTGTTTGTCCATCTTCTTGGATGGGCTGCAGCTTTaGAACACTGGTCAGGCCAAG | + |
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Preference number: 5 (lower is better) Translates to: SLRSKSSCVYLQCLSIFLDGLQL*NTGQAK Trigger: CTTGGCCTGACCAGTGTTCAAAAGCTGCAGCCCATC...CAAGAAGATGGACAAACACTGAAGATAGACACAAGAGCTCTTGGATCTCAGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| CDS-3UTR CAA 90 bp | TGCTTCTTCATATGTAGAAGTCCATTCTGTGTGGACTCAGGTATAGGCCACAAGAGGTTGATGAGAACCTaGGGAAGAGTCACCGATGAG | + |
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Preference number: 5 (lower is better) Translates to: CFFICRSPFCVDSGIGHKRLMRT*GRVTDE Trigger: CTCATCGGTGACTCTTCCCAAGGTTCTCATCAACCT...CTTGTGGCCTATACCTGAGTCCACACAGAATGGACTTCTACATATGAAGAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| CDS-3UTR CAA 90 bp | TGCTTCTTCATATGTAGAAGTCCATTCTGTGTGGACTCAGGTATAGGCCACAAGTGGTTGAGAACTGTATaGCCACAGGCCACTTCTAAG | + |
|
Preference number: 5 (lower is better) Translates to: CFFICRSPFCVDSGIGHKWLRTV*PQATSK Trigger: CTTAGAAGTGGCCTGTGGCAATACAGTTCTCAACCA...CTTGTGGCCTATACCTGAGTCCACACAGAATGGACTTCTACATATGAAGAAGCA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| CDS-3UTR CAA 90 bp | GAGCTCTTGTGTCTATCTTCAGTGTTTGTCCATCTTCTTGCTCTTGCCAATCCTTGGTTGAGAACTGTATaGCCACAGGCCACTTCTAAG | + |
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Preference number: 5 (lower is better) Translates to: ELLCLSSVFVHLLALANPWLRTV*PQATSK Trigger: CTTAGAAGTGGCCTGTGGCAATACAGTTCTCAACCA...AGGATTGGCAAGAGCAAGAAGATGGACAAACACTGAAGATAGACACAAGAGCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| CDS-3UTR CAA 90 bp | CTTAAACTCATCTTTGCATGCTGCATGAACTTTCTGGGAAGAGGAGGAAAAACAAGGTTGATGAGAACCTaGGGAAGAGTCACCGATGAG | + |
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Preference number: 5 (lower is better) Translates to: LKLIFACCMNFLGRGGKTRLMRT*GRVTDE Trigger: CTCATCGGTGACTCTTCCCAAGGTTCTCATCAACCT...TGTTTTTCCTCCTCTTCCCAGAAAGTTCATGCAGCATGCAAAGATGAGTTTAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| CDS-3UTR CAA 90 bp | CAAGTTAGTGTCAGCAAGTCCCAAGTCTCAATATCTAATCATAAAAGTTTTCTGGATGGGCTGCAGCTTTaGAACACTGGTCAGGCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: QVSVSKSQVSISNHKSFLDGLQL*NTGQAK Trigger: CTTGGCCTGACCAGTGTTCAAAAGCTGCAGCCCATC...CAGAAAACTTTTATGATTAGATATTGAGACTTGGGACTTGCTGACACTAACTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| CDS-3UTR CAA 90 bp | GAGCTCTTGTGTCTATCTTCAGTGTTTGTCCATCTTCTTGCTCTTGCCAATCCTAACAGAAAGAAGCCATaGGTTGAGAACTGTATTGCC | + |
|
Preference number: 5 (lower is better) Translates to: ELLCLSSVFVHLLALANPNRKKP*VENCIA Trigger: GGCAATACAGTTCTCAACCAATGGCTTCTTTCTGTT...AGGATTGGCAAGAGCAAGAAGATGGACAAACACTGAAGATAGACACAAGAGCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| CDS-3UTR CAA 90 bp | AGCCTGAGATCCAAGAGCTCTTGTGTCTATCTTCAGTGTTTGTCCATCTTCTTGAACAGAAAGAAGCCATaGGTTGAGAACTGTATTGCC | + |
|
Preference number: 5 (lower is better) Translates to: SLRSKSSCVYLQCLSIFLNRKKP*VENCIA Trigger: GGCAATACAGTTCTCAACCAATGGCTTCTTTCTGTT...CAAGAAGATGGACAAACACTGAAGATAGACACAAGAGCTCTTGGATCTCAGGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| CDS-3UTR CAA 90 bp | CTCTTTGCCTCAATTCTTAAGTACAGAGAGTGCCTATGGTACCAGGTGTCCACTGCCAACATCACCTCTTaGTTCCTTAGAGTATATATC | + |
|
Preference number: 5 (lower is better) Translates to: LFASILKYRECLWYQVSTANITS*FLRVYI Trigger: GATATATACTCTAAGGAACAAAGAGGTGATGTTGGC...AGTGGACACCTGGTACCATAGGCACTCTCTGTACTTAAGAATTGAGGCAAAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| CDS-3UTR CAA 90 bp | CTTAAACTCATCTTTGCATGCTGCATGAACTTTCTGGGAAGAGGAGGAAAAACAAACAGAAAGAAGCCATaGGTTGAGAACTGTATTGCC | + |
|
Preference number: 5 (lower is better) Translates to: LKLIFACCMNFLGRGGKTNRKKP*VENCIA Trigger: GGCAATACAGTTCTCAACCAATGGCTTCTTTCTGTT...TGTTTTTCCTCCTCTTCCCAGAAAGTTCATGCAGCATGCAAAGATGAGTTTAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| CDS-3UTR CAA 90 bp | CAAGTTAGTGTCAGCAAGTCCCAAGTCTCAATATCTAATCATAAAAGTTTTCTGTGGTTGAGAACTGTATaGCCACAGGCCACTTCTAAG | + |
|
Preference number: 5 (lower is better) Translates to: QVSVSKSQVSISNHKSFLWLRTV*PQATSK Trigger: CTTAGAAGTGGCCTGTGGCAATACAGTTCTCAACCA...CAGAAAACTTTTATGATTAGATATTGAGACTTGGGACTTGCTGACACTAACTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| CDS-3UTR CAA 90 bp | ACATTTACTTCAATGGGTGCTTACTGCTTAGTTTCAAGTGCTTACATGATTAACGCCAACATCACCTCTTaGTTCCTTAGAGTATATATC | + |
|
Preference number: 5 (lower is better) Translates to: TFTSMGAYCLVSSAYMINANITS*FLRVYI Trigger: GATATATACTCTAAGGAACAAAGAGGTGATGTTGGC...GTTAATCATGTAAGCACTTGAAACTAAGCAGTAAGCACCCATTGAAGTAAATGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| CDS TCA 72 bp | GATGGCCACCACCCGATCCTCACTCATGGAGGAGGCTaGTGCTGTGGCAGGGCGGATGTATGTGAAACCAAC | + |
|
Preference number: 6 (lower is better) Translates to: DGHHPILTHGGG*CCGRADVCETN Trigger: GTTGGTTTCACATACATCCGCCCTGCCACAGCATCAGCCTCCTCCATGAGTGAGGATCGGGTGGTGGCCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031086.5 ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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| CDS CAA 72 bp | GTGACAACAGAAAGAAGCCATTGGTTGAGAACTGTATaGCCACAGGCCACTTCTAAGAGGGGCTTGACATCA | + |
|
Preference number: 6 (lower is better) Translates to: VTTERSHWLRTV*PQATSKRGLTS Trigger: TGATGTCAAGCCCCTCTTAGAAGTGGCCTGTGGCAATACAGTTCTCAACCAATGGCTTCTTTCTGTTGTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031086.5 ENSMUST00000214668.2 ENSMUST00000214938.2 ENSMUST00000217602.2 |
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